Miyakogusa Predicted Gene
- Lj0g3v0062809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0062809.1 tr|Q1RU64|Q1RU64_MEDTR Thioredoxin fold
OS=Medicago truncatula GN=MTR_8g038440 PE=4
SV=1,72.55,0,Glutaredoxin,Glutaredoxin; seg,NULL; no
description,Thioredoxin-like fold;
Thioredoxin-like,Thioredo,CUFF.2843.1
(266 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13810.1 | Symbols: | Glutaredoxin family protein | chr5:445... 274 5e-74
AT3G57070.1 | Symbols: | Glutaredoxin family protein | chr3:211... 183 1e-46
AT2G41330.1 | Symbols: | Glutaredoxin family protein | chr2:172... 173 1e-43
AT5G58530.1 | Symbols: | Glutaredoxin family protein | chr5:236... 163 1e-40
AT5G39865.1 | Symbols: | Glutaredoxin family protein | chr5:159... 141 4e-34
AT3G28850.1 | Symbols: | Glutaredoxin family protein | chr3:108... 135 3e-32
AT5G03870.1 | Symbols: | Glutaredoxin family protein | chr5:103... 132 2e-31
AT4G10630.1 | Symbols: | Glutaredoxin family protein | chr4:656... 130 1e-30
AT1G32760.1 | Symbols: | Glutaredoxin family protein | chr1:118... 129 2e-30
AT5G06470.1 | Symbols: | Glutaredoxin family protein | chr5:197... 127 5e-30
AT1G64500.1 | Symbols: | Glutaredoxin family protein | chr1:239... 122 3e-28
AT5G01420.1 | Symbols: | Glutaredoxin family protein | chr5:174... 118 4e-27
AT3G11773.1 | Symbols: | Thioredoxin superfamily protein | chr3... 115 3e-26
AT3G11773.2 | Symbols: | Thioredoxin superfamily protein | chr3... 93 2e-19
>AT5G13810.1 | Symbols: | Glutaredoxin family protein |
chr5:4455769-4456593 FORWARD LENGTH=274
Length = 274
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/264 (58%), Positives = 180/264 (68%), Gaps = 30/264 (11%)
Query: 20 FFNRSLTTV-RSINDGKPPSQKPQ-NLERAAS--------------LRGKVVKKLCSLFE 63
FFNRSLT R++ D P S +L R S L+GKV K LC LFE
Sbjct: 23 FFNRSLTIHGRTVVDSGPKSHNLNPSLNRTTSITKFYTPVESMGTSLKGKV-KNLCRLFE 81
Query: 64 PPKPAPPAEDFAXXXXXXXXIESSDGESL--SGKLKPAKSVDSSPVIRLPGTEDRIVLYF 121
KP PA + G+SL ++ P S+++S VIRLPGTEDRIV+YF
Sbjct: 82 TSKPVKPA-------LAEIPQKQKSGKSLLPESRISPFSSLNNS-VIRLPGTEDRIVVYF 133
Query: 122 TSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEKNMRNVVLPQVF 181
TSLRGIRRTYEDCYAVRMIFRGFRVW+DERDVSMD AY+KEL GEK+ V LPQVF
Sbjct: 134 TSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKELQIAMGEKS---VSLPQVF 190
Query: 182 IRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVPCGNCSGSRKVFDD 241
I G+ VGGADVIK L E+GEL KIL+ P +PGFVC CGD+RFVPC NCSGS+K+FD+
Sbjct: 191 IMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCHCCGDIRFVPCSNCSGSKKLFDE 250
Query: 242 DEGLLKRCLECNENGLLRCPNCSS 265
DE +KRC ECNENGL+RCP+CSS
Sbjct: 251 DEDRVKRCPECNENGLIRCPDCSS 274
>AT3G57070.1 | Symbols: | Glutaredoxin family protein |
chr3:21124174-21125427 FORWARD LENGTH=417
Length = 417
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 109 RLPGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFG 168
RLPGTED+IVLYFT+LRGIR+TYEDC VR I RG +V VDERD+SMD Y+KEL + G
Sbjct: 262 RLPGTEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDISMDSKYRKELQSVLG 321
Query: 169 EKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVP 228
+ V LPQVFIRG +GG + I QL + GEL ++L+ P + C SCGD RFVP
Sbjct: 322 AAE-KPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACERLGTCRSCGDARFVP 380
Query: 229 CGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNC 263
C NC GS KVF++ + KRC +CNENGL+RC C
Sbjct: 381 CTNCDGSTKVFEEQDERFKRCPKCNENGLVRCRVC 415
>AT2G41330.1 | Symbols: | Glutaredoxin family protein |
chr2:17227067-17228275 FORWARD LENGTH=402
Length = 402
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 107/151 (70%), Gaps = 2/151 (1%)
Query: 113 TEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEKNM 172
E++IV+YFTSLRGIR+TYEDC VR I RGF+V V+ERD+SMD Y+KEL GE+
Sbjct: 252 NENKIVVYFTSLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRKELQNALGEE-- 309
Query: 173 RNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVPCGNC 232
+ V LPQVFIRG +GG + IK L + GEL ++L+ P + C+SCGD RFVPC NC
Sbjct: 310 KPVCLPQVFIRGVRIGGIEEIKILNDGGELAEMLKDFPACESIGACDSCGDARFVPCTNC 369
Query: 233 SGSRKVFDDDEGLLKRCLECNENGLLRCPNC 263
GS KVF++ E KRC CNENGL+RC C
Sbjct: 370 GGSTKVFEEQEDGFKRCNGCNENGLVRCNKC 400
>AT5G58530.1 | Symbols: | Glutaredoxin family protein |
chr5:23660428-23661249 FORWARD LENGTH=273
Length = 273
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 109/163 (66%), Gaps = 8/163 (4%)
Query: 108 IRLPGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLF 167
I +PG E IV+YFTSLR +R T+E C +V I F V +DERD+SMD ++ EL +F
Sbjct: 106 ISIPGAEKSIVVYFTSLRVVRPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRIF 165
Query: 168 GEKNMRNV------VLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESC 221
G+ +N LP+VFI GR +GGA+ +KQL E+GEL K+++ LP+ +PG VCE C
Sbjct: 166 GKDQNQNQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQELPKIEPG-VCEMC 224
Query: 222 GDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCS 264
G RFVPC +C GS KV + G + CL CNENGL+RC +CS
Sbjct: 225 GGHRFVPCKDCHGSHKVHTEKLG-FRTCLTCNENGLVRCSSCS 266
>AT5G39865.1 | Symbols: | Glutaredoxin family protein |
chr5:15965560-15966732 REVERSE LENGTH=390
Length = 390
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 108/165 (65%), Gaps = 15/165 (9%)
Query: 114 EDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEK--N 171
++R+VLYFTSLRGIR+TYEDC +R+I + + +DERDVSM +K EL L K N
Sbjct: 224 KERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNN 283
Query: 172 MRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKIL---EGLPRTKPGF--VCESCGDMRF 226
+ LP+VF+ + +GG + IK+L E GEL K++ E + PGF CE+CGD+RF
Sbjct: 284 GVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRF 343
Query: 227 VPCGNCSGSRKVF----DDDEGL----LKRCLECNENGLLRCPNC 263
VPC CSGS K++ ++DEG+ +RC CNENGL+RC C
Sbjct: 344 VPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVC 388
>AT3G28850.1 | Symbols: | Glutaredoxin family protein |
chr3:10848669-10849955 FORWARD LENGTH=428
Length = 428
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 27/177 (15%)
Query: 114 EDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEKNMR 173
++R++LYFTSLRGIR+TYE+ VR+I + + VDERDVSM +K EL L GEK +
Sbjct: 250 KERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFNK 309
Query: 174 NV--VLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKP-----GFVCESCGDMRF 226
V LP+VF+ + +GGA+ I++L E G+L K+L G R + G CE+CGD+RF
Sbjct: 310 GVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVRF 369
Query: 227 VPCGNCSGSRKVF--------------------DDDEGLLKRCLECNENGLLRCPNC 263
VPC CSGS KV+ ++ E + C +CNENGL+RCP C
Sbjct: 370 VPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVC 426
>AT5G03870.1 | Symbols: | Glutaredoxin family protein |
chr5:1035813-1036967 REVERSE LENGTH=384
Length = 384
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
Query: 111 PGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEK 170
PG E +V+Y T+LRGIR+T+EDC VR I V ERDVSM +K+E+ G+ G K
Sbjct: 233 PGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTK 292
Query: 171 NMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTK-PGFVCESCGDMRFVPC 229
+++ +P VF++GR VG + + +L E G+LG +LEG+P + G C CG MRF+ C
Sbjct: 293 HVK---IPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAARLGGSCCRGCGGMRFMMC 349
Query: 230 GNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCS 264
C+GS KV ++++ + +CL+CNENGL+ CP CS
Sbjct: 350 VVCNGSCKVREEEKKSMVKCLKCNENGLVLCPICS 384
>AT4G10630.1 | Symbols: | Glutaredoxin family protein |
chr4:6566625-6567629 REVERSE LENGTH=334
Length = 334
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 102/163 (62%), Gaps = 9/163 (5%)
Query: 111 PGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEK 170
PG E+R+V+Y TSLRG+R+T+E C AVR F V V ERDVSMD +++EL+ L ++
Sbjct: 172 PGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKR 231
Query: 171 NMRNVVL---PQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPG----FVCESCGD 223
V P+VF++GR +GG + + +L E G G+++ G+PR K G C+ CG
Sbjct: 232 VGDEGVAALPPRVFVKGRYIGGGEEVLRLVEEGSFGELISGIPRKKAGGCESGACDGCGG 291
Query: 224 MRFVPCGNCSGSRKVFD--DDEGLLKRCLECNENGLLRCPNCS 264
+ F+PC C+GS K+ ++ RC ECNENGL+ CP CS
Sbjct: 292 LFFLPCFRCNGSCKMVKGWGSASVVVRCNECNENGLVPCPICS 334
>AT1G32760.1 | Symbols: | Glutaredoxin family protein |
chr1:11858251-11859195 FORWARD LENGTH=314
Length = 314
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 106/157 (67%), Gaps = 4/157 (2%)
Query: 112 GTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEKN 171
G E+R+V+Y TSLRG+RRT+E C AVR F V V ERDVSMD +++EL L ++
Sbjct: 158 GGENRVVIYTTSLRGVRRTFEACNAVRAAIESFGVVVCERDVSMDRGFREELSNLMAVES 217
Query: 172 MRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTK--PGFVCESCGDMRFVPC 229
V+ P+VF++G+ +GGA+ + +L E G LG++L+ +PR K G C CG + F+PC
Sbjct: 218 TAAVLPPRVFVKGKYIGGAEEVMRLVEEGLLGELLKEIPRKKDRCGGGCGGCGGLAFLPC 277
Query: 230 GNCSGSRKVFD--DDEGLLKRCLECNENGLLRCPNCS 264
C+GS KV + ++ ++ +C ECNENGL+RCP CS
Sbjct: 278 SGCNGSCKVVEGWGNDAVVVKCKECNENGLVRCPICS 314
>AT5G06470.1 | Symbols: | Glutaredoxin family protein |
chr5:1974659-1975378 REVERSE LENGTH=239
Length = 239
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 13/161 (8%)
Query: 111 PGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEK 170
PG ED +V Y T LR +R+T+E C VR + +V ERDVSMD +++E+ L G K
Sbjct: 85 PGGEDSVVFYTTGLRSVRKTFEACRRVRFLLENHQVMYRERDVSMDSEFREEMWRLLGGK 144
Query: 171 NMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVPCG 230
V P++FIRGR +GGA+ + L E G+L K+L+G+ + CESC + RF+ C
Sbjct: 145 ----VTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQGISQVDSP--CESCENERFLICS 198
Query: 231 NCSGSRKVFDD-------DEGLLKRCLECNENGLLRCPNCS 264
+C+GS ++ + ++ + RC ECNENGL++CP C+
Sbjct: 199 SCNGSTRLLAEHHDEESSNDNMWTRCRECNENGLVKCPLCT 239
>AT1G64500.1 | Symbols: | Glutaredoxin family protein |
chr1:23953270-23954376 FORWARD LENGTH=368
Length = 368
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 9/163 (5%)
Query: 111 PGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEK 170
PG + +++Y TSL+G+RRTYEDC VR I V VDERDVS+D EL L +
Sbjct: 208 PGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGVLSELKELL--Q 265
Query: 171 NMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPG----FVCESCGDMRF 226
+ +V P+VF++GR +GGA + + E G+LG++L + G CE CG R+
Sbjct: 266 DEASVAPPRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVERVGEEGRLTCEGCGGARW 325
Query: 227 VPCGNCSGSRKVFDDDEG---LLKRCLECNENGLLRCPNCSSN 266
+PC C GS KV +RC++CNENGL+RCP C N
Sbjct: 326 LPCFECGGSCKVAAVGAAKGERWERCVKCNENGLIRCPVCFVN 368
>AT5G01420.1 | Symbols: | Glutaredoxin family protein |
chr5:174886-176091 REVERSE LENGTH=401
Length = 401
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 111 PGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEK 170
PG E+ +V Y T+LRGIR+T++DC +R + F+V ERDVSM Y++EL + +
Sbjct: 252 PGGEESVVFYTTTLRGIRKTFDDCNMIRFLLDSFKVKYYERDVSMHREYREELRRISAAE 311
Query: 171 NMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVPCG 230
V+ P +F++GRC+GGA + L E G+ + EG+P T C C RF+ C
Sbjct: 312 T--EVLPPVLFVKGRCIGGAQRVLGLHEQGKFKILFEGIPITGDE-RCRRCDGFRFLMCD 368
Query: 231 NCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCS 264
C GSR++ D G +CL CNENGL+ C CS
Sbjct: 369 GCRGSRRIISGD-GSRIQCLICNENGLIVCVGCS 401
>AT3G11773.1 | Symbols: | Thioredoxin superfamily protein |
chr3:3722989-3723441 REVERSE LENGTH=150
Length = 150
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 119 LYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYKKELMGLFGEKNMRNVVLP 178
+ TSLRG+R+T+EDC VR + + ERDVSMDC YK+E+ L GE+ V P
Sbjct: 11 FFTTSLRGVRKTFEDCRRVRFLLENHKASFRERDVSMDCEYKEEMWRLLGEQ----VTPP 66
Query: 179 QVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVPCGNCSGSRKV 238
++FI+ + +GGAD + L E +L K+LE K CE C + RF+ C C+G +V
Sbjct: 67 RLFIKCKYIGGADEVVSLNENEKLKKLLEVFSSAKSR-QCEMCENERFLICSKCNGRSRV 125
Query: 239 FDDDEGLLKRCLECNENGLLRCPNCS 264
+ E KRC+ECNENGL++C C+
Sbjct: 126 VAEHET-WKRCIECNENGLVKCALCT 150
>AT3G11773.2 | Symbols: | Thioredoxin superfamily protein |
chr3:3722989-3723659 REVERSE LENGTH=200
Length = 200
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 150 ERDVSMDCAYKKELMGLFGEKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGL 209
ERDVSMDC YK+E+ L GE+ V P++FI+ + +GGAD + L E +L K+LE
Sbjct: 92 ERDVSMDCEYKEEMWRLLGEQ----VTPPRLFIKCKYIGGADEVVSLNENEKLKKLLEVF 147
Query: 210 PRTKPGFVCESCGDMRFVPCGNCSGSRKVFDDDEGLLKRCLECNENGLLRCPNCS 264
K CE C + RF+ C C+G +V + E KRC+ECNENGL++C C+
Sbjct: 148 SSAKSR-QCEMCENERFLICSKCNGRSRVVAEHETW-KRCIECNENGLVKCALCT 200