Miyakogusa Predicted Gene
- Lj0g3v0059959.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0059959.1 Non Chatacterized Hit- tr|I1L026|I1L026_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.55,0,seg,NULL;
FAMILY NOT NAMED,NULL; SMR,Smr protein/MutS2 C-terminal;
PPR,Pentatricopeptide repeat; no ,CUFF.2660.1
(716 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 757 0.0
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 400 e-111
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 7e-44
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 175 9e-44
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 150 2e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 144 3e-34
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 139 9e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 2e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 4e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 4e-32
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 4e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 5e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 130 3e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 4e-30
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-29
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 128 2e-29
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 2e-29
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 126 5e-29
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 124 2e-28
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 6e-28
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 2e-27
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 120 2e-27
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 120 4e-27
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 8e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 1e-26
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 119 1e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 118 2e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 117 2e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 117 4e-26
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 6e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 4e-25
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 8e-25
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 111 2e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 7e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 7e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-22
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 2e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 98 2e-20
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-20
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 96 1e-19
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 95 1e-19
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 94 3e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 94 5e-19
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 92 9e-19
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 91 3e-18
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 91 4e-18
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 90 6e-18
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 90 6e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 87 3e-17
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 87 5e-17
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 87 5e-17
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 86 6e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 84 5e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 9e-16
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 81 3e-15
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 80 3e-15
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 79 8e-15
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 79 8e-15
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 79 2e-14
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 77 4e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 77 4e-14
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 6e-14
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 6e-14
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 76 8e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 5e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 73 6e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 7e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 73 8e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 73 9e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 72 1e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 69 8e-12
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 69 1e-11
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 68 2e-11
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 68 2e-11
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 68 2e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 67 3e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 67 5e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 66 9e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 1e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 2e-10
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 64 3e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 63 6e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 63 6e-10
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 62 2e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 61 3e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 59 1e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 56 7e-08
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 56 1e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 56 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 54 3e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/652 (56%), Positives = 476/652 (73%), Gaps = 12/652 (1%)
Query: 58 THFSLQPLNSQ------LDAKLDNPDAKSPPSSKSRIWVNPRSPRAKQLLKKSYAATSSP 111
TH S+Q Q +D L P+ P +SKS +WVNP+SPRA QL +KSY + S
Sbjct: 55 THVSVQEAIPQSEKSKLVDVDLPIPE---PTASKSYVWVNPKSPRASQLRRKSYDSRYSS 111
Query: 112 LEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIK 171
L KLA+SLD+C P E V + ++ G G + E++A++ L+NM NPETA L + +K
Sbjct: 112 LIKLAESLDACKPNEADVCD-VITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMK 170
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P+R V+LYNVT+K+FR+ KD ++EKLFDEML+RG+KP+ TF+T+++CA VP +AV
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
EWFEKM SF CEPD+ A+MI Y R GNVDMALSLYDRA+TEKWR+D V FS LI++Y
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G+SGNYD CL++Y +MK LG KPN+V YN L+ +MGRAKR AK IY++++ NGF+PNW
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
TYAAL++AY RAR +DAL++Y+EMKEKG + +LYN L MCA DEA +IF D
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
MK+ C PD++T++SLI +Y+C G+V+EAEA L +M GFEP + LTS++ YGKAK
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 472 RADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVVRYL 531
+ DDVV+ F+Q+L+LGI+PDDRFC CLL V TQ P +E+GK+ C+EKAKPKLG VV+ L
Sbjct: 471 QVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKML 530
Query: 532 TEEHE-GDGDFRKEALELFNSIDDDVKKSLCNCLIDLCVSLDVPXXXXXXXXXXXXXEIY 590
EE +G F+KEA EL +SI DVKK+ NCLIDLCV+L+ +IY
Sbjct: 531 VEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY 590
Query: 591 TDIQFRSQTRWCLHLKKLSLGAAMTALRVWINDLSK-ALESGEELPPVLGINTGIGKHNV 649
T +Q +S T+W LHLK LSLGAA+TAL VW+NDLS+ ALESGEE PP+LGINTG GKH
Sbjct: 591 TGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKY 650
Query: 650 SDKGLGSVLESYLKELNAPFHKATDKAGWFLTTYEAAKSWLQSRGSPKIVAA 701
SDKGL +V ES+LKELNAPFH+A DK GWFLTT AAK+WL+SR S V+A
Sbjct: 651 SDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/659 (35%), Positives = 363/659 (55%), Gaps = 16/659 (2%)
Query: 52 PLTQSKTHFS--LQPLNSQLDAKLDNPDAKSPPSSKSRIWVNPRSPRAKQL---LKKSYA 106
P+T S L+PL S + + S P S +WVNP P+ L +K A
Sbjct: 57 PITTKTPSLSEQLKPL-SATTLRQEQTQILSKPKS---VWVNPTRPKRSVLSLQRQKRSA 112
Query: 107 ATSSP----LEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLA 162
+ +P L A L+S TE+ L+ + A++VL+++ +
Sbjct: 113 YSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTF 172
Query: 163 FEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
F + K K + YNVT+K R + F E++ EM++ GV+ + IT+ST++ CA
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 232
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
C++ +KA+EWFE+M PD+ ++++ VY++ G V+ LSLY+RA W+ D +
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
AFS L KM+G +G+YD V +MK + KPN+V YN LL AMGRA + A++++ EM
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
++ G +PN T AL++ Y +AR + DAL +++EMK K +D +LYN L +MCA G
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 412
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
+EA ++F DMK S C+PDNF+YT+++N+Y GK +A L EM++ G + N++ T
Sbjct: 413 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 472
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQE-LGKITACIEKAK 521
LV GKAKR DDVV +F+ + G+ PDDR C CLL V E K+ AC+E+A
Sbjct: 473 LVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERAN 532
Query: 522 PKLGSVVRYLTEEHEGDGDFRKEALELFNSIDDDVKKSLCNCLIDLCVSLDVPXXXXXXX 581
KL + V + +E ++E + N+ + ++ CNCLID+C +
Sbjct: 533 KKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELL 592
Query: 582 XXXXXXEIYTDIQFRSQTRWCLHLKKLSLGAAMTALRVWINDLSKALESGEELPPVLGIN 641
+Y + ++ W L ++ LS+GAA TAL W+ L+ ++ EELP +
Sbjct: 593 YLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQ 652
Query: 642 TGIGKHNVSDKGLGSVLESYLKELNAPFHKATDKAGWFLTTYEAAKSWLQSRGSPKIVA 700
TG G H S +GL + +L++L+APF + +D+ G F+ T E SWL+S+ P + +
Sbjct: 653 TGTGTHRFS-QGLANSFALHLQQLSAPFRQ-SDRPGIFVATKEDLVSWLESKFPPLVTS 709
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 246/566 (43%), Gaps = 35/566 (6%)
Query: 128 QVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
+E + G + +A VL M N AL F + K++ Y +
Sbjct: 311 HAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLG 370
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
K FG KL DEM++ G KPN +T++ L+ + +A+ F +M CEPD
Sbjct: 371 RAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
++I ++A+ G +D+A+ +Y R + DT +S +I G +G+ A ++ +M
Sbjct: 431 TYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEM 490
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
G PN+VT+N ++ +A+ A +Y +M GF P+ TY+ +++
Sbjct: 491 VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL 550
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
E+A V+ EM+ K D+ +Y +L D+ GN D+A + + M +G +P+ T S
Sbjct: 551 EEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG-LRPNVPTCNS 609
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
L++ + + +++EA LL M+ G P++ T L+ A+ D+G
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSN----------FDMG 659
Query: 488 ISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEALE 547
FC L+ V+ L K+ A P G VR D L+
Sbjct: 660 ------FCGQLMAVSGHPAHMFLLKMPP----AGPD-GQKVR----------DHVSNFLD 698
Query: 548 LFNSIDDDVKKSLCNCLIDLCVSLDVPXXXXXXXXXXXXXEIYTD-IQFRSQTRWCLHLK 606
+S D + K+ L + ++D + +Y D ++ +S + W ++L
Sbjct: 699 FMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLH 758
Query: 607 KLSLGAAMTALRVWINDLSKALESGEELPPVLGINTGIGKHN--VSDKGLGSVLESYLKE 664
+S G A+ AL + K + + P + I TG G+ + + +E L
Sbjct: 759 VMSEGTAVIALSRTLAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNI 818
Query: 665 LNAPFHKATDKAGWFLTTYEAAKSWL 690
N PF +G F+ + E K+WL
Sbjct: 819 FNFPFFTENGNSGCFVGSGEPLKNWL 844
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 148/609 (24%), Positives = 265/609 (43%), Gaps = 69/609 (11%)
Query: 157 ETALLAFEYFKQ-KIKPARHVVLYNVTLKL-FREIKDFGRAEKLFDEMLQRGVKPNLITF 214
E A+ F K+ ++P ++V YN + + +F + K FDEM + GV+P+ ITF
Sbjct: 285 EEAISVFNSMKEYGLRP--NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
++L+A S + A F++M + E D +++ + G +D+A + +
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
++ + V++S +I + +G +D L+++ +M+ LG + V+YN LL + R+ +
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A I EM G + TY ALL Y + ++ V+ EMK + + + Y+ L D
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
+ G EAM+IF + KS+G + D Y++LI+ G V A +L++EM + G
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAG-LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 455 PNILALTSLVHLYGKAKRAD---------------------------DVVKIFNQLLDLG 487
PN++ S++ +G++ D V+++F QL
Sbjct: 582 PNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTES 641
Query: 488 ISPDDRFCD-------CLLYVATQIPRQEL--------GKITAC-----IEKAKPKL--- 524
+ + C+ C+L V ++ + E+ + AC E A L
Sbjct: 642 NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Query: 525 --------GSVVRYLTEEHEGDGDFRKEALELFNSIDDDVKKSLCNCLIDLCVSLDVPXX 576
G V L + E + + N +D + N L D+
Sbjct: 702 RLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRG 761
Query: 577 XXXXXXXXXXXEIYTDIQFRSQTRWCLHLKKLSLGAAMTALRVWINDLSKALESGEELPP 636
+++ ++ S CL L +S GAA + W+ ++ + G ELP
Sbjct: 762 AELVALEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPK 817
Query: 637 VLGINTGIGKHN--VSDKGLGSVLESYLKELNAPFHKATDKAGWFLTTYEAAKSWLQSRG 694
VL I TG GKH+ V D L +E L+ ++APFH + G F ++ +WL+
Sbjct: 818 VLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESA 877
Query: 695 SPKIVAALD 703
+ K++ D
Sbjct: 878 TLKLLILHD 886
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 170/349 (48%), Gaps = 11/349 (3%)
Query: 229 KAVEWFEKMPSFECEPDDN--LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
KAV ++E E ++ L+++MI R G V +A +++ A + AFSA
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAK-RARDAKTIYEEMVKN 345
LI YG SG ++ +SV++ MK G +PN+VTYN ++ A G+ + ++EM +N
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
G P+ T+ +LL R E A +++ EM + + D YN L D G D A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+I A M P+ +Y+++I+ ++ G+ EA L EM G + ++ +L+
Sbjct: 394 FEILAQMPVK-RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL-YVATQIPRQELGKITACIEKAKPKL 524
+Y K R+++ + I ++ +GI D + LL Q E+ K+ + K + L
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM-KREHVL 511
Query: 525 GSVVRYLTE-EHEGDGDFRKEALELFNSIDDDVKKS---LCNCLID-LC 568
+++ Y T + G KEA+E+F ++ L + LID LC
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 143/309 (46%), Gaps = 7/309 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A+++F+ G + FS L++ + +A+ F M + P+ ++I
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 255 VYARIG-NVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ G +D + + D + F++L+ + G ++A +++ +M +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
++ +YN LL A+ + + A I +M PN +Y+ ++ + +A ++AL++
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+ EM+ G +D+V YN L + G ++EA+ I +M S G + D TY +L+ Y
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG-IKKDVVTYNALLGGYG 490
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
GK E + + EM R PN+L ++L+ Y K + ++IF + G+
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR---- 546
Query: 494 FCDCLLYVA 502
D +LY A
Sbjct: 547 -ADVVLYSA 554
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/609 (22%), Positives = 260/609 (42%), Gaps = 53/609 (8%)
Query: 93 RSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDN 152
+ P L + Y + +E ++ L +E ++ LG + +A VL
Sbjct: 283 KGPSGTALTSRQYCNSGHIVENVSSVLRRFR--WGPAAEEALQNLGLRIDAYQANQVLKQ 340
Query: 153 MVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLI 212
M + AL F + K++ Y + K FG KL DEM++ G +PN +
Sbjct: 341 MNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTV 400
Query: 213 TFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA 272
T++ L I+ Y R ++ A++++++
Sbjct: 401 TYNRL-----------------------------------IHSYGRANYLNEAMNVFNQM 425
Query: 273 KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
+ + D V + LI ++ +G D + +Y M+ G P+ TY+ ++ +G+A
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
A ++ EMV G +PN TY ++ + +AR ++AL +Y++M+ G + DKV Y+++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
++ H G +EA +F +M+ + PD Y L++++ G V +A M+ G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQEL-- 510
PN+ SL+ + + + + ++ +L LG+ P + LL T R +L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD-GRSKLDM 663
Query: 511 ---GKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEA---LELFNSIDDDVKKSLCNCL 564
G++ A P +++ +G+ + R A L+L +S D + K+ L + +
Sbjct: 664 GFCGQLMA--STGHPAHMFLLKMPAAGPDGE-NVRNHANNFLDLMHSEDRESKRGLVDAV 720
Query: 565 IDLCVSLDVPXXXXXXXXXXXXXEIYTD-IQFRSQTRWCLHLKKLSLGAAMTALRVWIND 623
+D ++ D ++ +S + W ++L +S G A+TAL +
Sbjct: 721 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 780
Query: 624 LSKALESGEELPPVLGINTGIGKHN--VSDKGLGSVLESYLKELNAPFHKATDKAGWFLT 681
K + + P + I TG G+ + + +E L +PF + +G F+
Sbjct: 781 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 840
Query: 682 TYEAAKSWL 690
+ E WL
Sbjct: 841 SGEPLNRWL 849
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/609 (22%), Positives = 260/609 (42%), Gaps = 53/609 (8%)
Query: 93 RSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDN 152
+ P L + Y + +E ++ L +E ++ LG + +A VL
Sbjct: 283 KGPSGTALTSRQYCNSGHIVENVSSVLRRFR--WGPAAEEALQNLGLRIDAYQANQVLKQ 340
Query: 153 MVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLI 212
M + AL F + K++ Y + K FG KL DEM++ G +PN +
Sbjct: 341 MNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTV 400
Query: 213 TFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA 272
T++ L I+ Y R ++ A++++++
Sbjct: 401 TYNRL-----------------------------------IHSYGRANYLNEAMNVFNQM 425
Query: 273 KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
+ + D V + LI ++ +G D + +Y M+ G P+ TY+ ++ +G+A
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
A ++ EMV G +PN TY ++ + +AR ++AL +Y++M+ G + DKV Y+++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
++ H G +EA +F +M+ + PD Y L++++ G V +A M+ G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQEL-- 510
PN+ SL+ + + + + ++ +L LG+ P + LL T R +L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD-GRSKLDM 663
Query: 511 ---GKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEA---LELFNSIDDDVKKSLCNCL 564
G++ A P +++ +G+ + R A L+L +S D + K+ L + +
Sbjct: 664 GFCGQLMA--STGHPAHMFLLKMPAAGPDGE-NVRNHANNFLDLMHSEDRESKRGLVDAV 720
Query: 565 IDLCVSLDVPXXXXXXXXXXXXXEIYTD-IQFRSQTRWCLHLKKLSLGAAMTALRVWIND 623
+D ++ D ++ +S + W ++L +S G A+TAL +
Sbjct: 721 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 780
Query: 624 LSKALESGEELPPVLGINTGIGKHN--VSDKGLGSVLESYLKELNAPFHKATDKAGWFLT 681
K + + P + I TG G+ + + +E L +PF + +G F+
Sbjct: 781 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 840
Query: 682 TYEAAKSWL 690
+ E WL
Sbjct: 841 SGEPLNRWL 849
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/609 (22%), Positives = 260/609 (42%), Gaps = 53/609 (8%)
Query: 93 RSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDN 152
+ P L + Y + +E ++ L +E ++ LG + +A VL
Sbjct: 283 KGPSGTALTSRQYCNSGHIVENVSSVLRRFR--WGPAAEEALQNLGLRIDAYQANQVLKQ 340
Query: 153 MVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLI 212
M + AL F + K++ Y + K FG KL DEM++ G +PN +
Sbjct: 341 MNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTV 400
Query: 213 TFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA 272
T++ L I+ Y R ++ A++++++
Sbjct: 401 TYNRL-----------------------------------IHSYGRANYLNEAMNVFNQM 425
Query: 273 KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
+ + D V + LI ++ +G D + +Y M+ G P+ TY+ ++ +G+A
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
A ++ EMV G +PN TY ++ + +AR ++AL +Y++M+ G + DKV Y+++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
++ H G +EA +F +M+ + PD Y L++++ G V +A M+ G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQEL-- 510
PN+ SL+ + + + + ++ +L LG+ P + LL T R +L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD-GRSKLDM 663
Query: 511 ---GKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEA---LELFNSIDDDVKKSLCNCL 564
G++ A P +++ +G+ + R A L+L +S D + K+ L + +
Sbjct: 664 GFCGQLMA--STGHPAHMFLLKMPAAGPDGE-NVRNHANNFLDLMHSEDRESKRGLVDAV 720
Query: 565 IDLCVSLDVPXXXXXXXXXXXXXEIYTD-IQFRSQTRWCLHLKKLSLGAAMTALRVWIND 623
+D ++ D ++ +S + W ++L +S G A+TAL +
Sbjct: 721 VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAW 780
Query: 624 LSKALESGEELPPVLGINTGIGKHN--VSDKGLGSVLESYLKELNAPFHKATDKAGWFLT 681
K + + P + I TG G+ + + +E L +PF + +G F+
Sbjct: 781 FRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVG 840
Query: 682 TYEAAKSWL 690
+ E WL
Sbjct: 841 SGEPLNRWL 849
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 176/347 (50%), Gaps = 3/347 (0%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V YN L ++ + A K+ +EM+ G P+++T+++L++ + + +A+E +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M +PD +++ + R G V+ A+S+++ + + + F+A IKMYG G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ + ++ ++ V G P++VT+N LL G+ + +++EM + GF P T+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ AY R E A++VY+ M + G D YN + A G +++ K+ A+M+ G
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME-DG 553
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
C+P+ TY SL++ Y+ ++ +L E+ EP + L +LV + K +
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 477 VKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPK 523
+ F++L + G SPD + ++ + + RQ + K ++ K +
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGR--RQMVAKANGVLDYMKER 658
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGR---AEKLFDEMLQRGVKPNLITFS 215
AL AF++F K K + ++ +V + + GR A +F+ + + G ++ +++
Sbjct: 154 ALRAFDWF-MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNV-DMALSLYDRAKT 274
+L++ + +AV F+KM C+P ++ V+ ++G + SL ++ K+
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
+ D ++ LI + V+ +MK G + VTYN LL G++ R ++
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A + EMV NGFSP+ TY +L+ AY R ++A+ + +M EKG D Y L
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
G + AM IF +M+++G C+P+ T+ + I MY GK TE + +E+ CG
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
P+I+ +L+ ++G+ +V +F ++ G P+ + L+
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 3/325 (0%)
Query: 176 VVLYNVTLKLFREIKD-FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
++ YNV L +F ++ + + L ++M G+ P+ T++TL+ C S+ +A + F
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
E+M + D +++ VY + A+ + + + V +++LI Y
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G D + + + M G KP++ TY LL RA + A +I+EEM G PN T+
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
A ++ Y + + ++ E+ G D V +N L + G E +F +MK
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
+G P+ T+ +LI+ YS G +A + M+ G P++ +++ + +
Sbjct: 483 AGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 475 DVVKIFNQLLDLGISPDD-RFCDCL 498
K+ ++ D P++ +C L
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 156/336 (46%), Gaps = 4/336 (1%)
Query: 157 ETALLAFEYFKQK-IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
E+A+ FE + KP ++ +N +K++ F K+FDE+ G+ P+++T++
Sbjct: 401 ESAMSIFEEMRNAGCKP--NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
TL+A + + F++M P+ ++I Y+R G+ + A+++Y R
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D ++ ++ G ++ V ++M+ KPN +TY +LL+A K
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
++ EE+ P L+ + +A + E+KE+G D N + +
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
+A + MK G P TY SL+ M+S ++E +L E++ G +P
Sbjct: 639 YGRRQMVAKANGVLDYMKERG-FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+I++ ++++ Y + R D +IF+++ + GI PD
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 6/352 (1%)
Query: 131 EMLVKGLGENVTEREAMIVL--DNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFRE 188
E+ V GL ++ ++ + N ++ E + + E + P R +N + +
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET--FNTLISAYSR 501
Query: 189 IKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNL 248
F +A ++ ML GV P+L T++T++A + + ++ + +M C+P++
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
S+++ YA + + SL + + V L+ + +S++K
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
G P++ T N+++ GR + A + + M + GF+P+ TY +L+ + R+
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
+ + +E+ KG D + YN + +A +IF++M++SG PD TY +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG-IVPDVITYNTF 740
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
I Y+ EA ++ MI+ G PN S+V Y K R D+ K+F
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLF 791
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y L + K+ G L +E+ ++P + TLV S C + +A F ++
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
PD SM+ +Y R V A + D K + +++L+ M+ S ++
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ ++ G KP++++YN ++YA R R RDA I+ EM +G P+ TY +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+Y E+A+ V + M + G ++ YN + D DEA D+++
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 34/333 (10%)
Query: 161 LAFEYF-KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
LA E F + + V +YN + ++ F +A++L D M QRG P+LI+F+TL+
Sbjct: 209 LAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN 268
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
++ S P+ +A+ L D + R
Sbjct: 269 A---------------RLKSGGLTPN------------------LAVELLDMVRNSGLRP 295
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + ++ L+ N D + V+ DM+ +P++ TYN ++ GR A +A+ ++
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
E+ GF P+ TY +LL A+ R R +E VY++M++ G D++ YN + M
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G D A++++ DMK PD TYT LI+ + EA AL++EM+ G +P +
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
++L+ Y KA + ++ F+ +L G PD+
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 226/510 (44%), Gaps = 21/510 (4%)
Query: 193 GRAEKLF---DEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
GR E+L+ +E+ G K + + ++ + + + + M + P L
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
MI + + V A + + ++V+ +++++KMY +Y + VY +K
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +P+ TYN L+ R +R + + ++M G P TY +L+ A+ + +C E
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
A +++E+ KG +D+ Y+ + + G+ +A K+ MK++G +P T L+
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG-IEPTLATMHLLM 1074
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
YS G EAE +L+ + E L +S++ Y ++K + ++ ++ G+
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 490 PDDRFCDCLLYVAT-QIPRQELGKITACIEKAKPKLGSVVRYLTEE-----HEGDGDFRK 543
PD R C + A+ + E+ + +E L +R L E DG F K
Sbjct: 1135 PDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLP--IRLLAGRPELLVSEVDGWFEK 1192
Query: 544 EALELFNSIDDDVKKSLCNCLIDLCVSLDVPXXXXXXXXXXXXXEIYTDIQFRSQTR-WC 602
SI+D+ + N L++L + ++ I++ FR + W
Sbjct: 1193 -----LKSIEDNAALNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWG 1247
Query: 603 LHLKKLSLGAAMTALRVWINDLSKA-LESGEELPPVLGINTGIGKHNVSDKGLGSVLESY 661
++LS GAA+ AL +W++ + A LE E P + + TG ++N L L++
Sbjct: 1248 ADFRRLSGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAEYN--GISLDKTLKAC 1305
Query: 662 LKELNAPFHKATDKAGWFLTTYEAAKSWLQ 691
L E+ +PF + G + + + WL+
Sbjct: 1306 LWEMGSPFLPCKTRTGLLVAKAHSLRMWLK 1335
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
+ YN L + A K+F++M +P+L T++ +++ C + +A F +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
+ PD S++Y +AR N + +Y + + + D + ++ +I MYG G
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 297 YDACLSVYSDMKVL-GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D L +Y DMK L G P+ +TY L+ ++G+A R +A + EM+ G P TY+
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
AL+ Y +A E+A + M G D + Y+++ D+ +A ++ DM S
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 416 G 416
G
Sbjct: 538 G 538
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 148/300 (49%), Gaps = 4/300 (1%)
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
+ TL+ C +A + F + CE +++ SM+ VY ++G + A + ++A+
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 274 TEKWRVD-TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
T+ + + ++ +I+ YG + SV +++ G P++ T+N+L+ A +
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
A+ I+ M+++G SP + LL A C E+ V +E+++ G + K ++
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK-VTEAEALLNEMIRC 451
D A GN E KI++ MK++G P Y +I + C GK V +AE +++EM
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYL-PTIRLYRMMIELL-CKGKRVRDAEIMVSEMEEA 921
Query: 452 GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELG 511
F+ + S++ +Y + V+++ ++ + G+ PD+ + L+ + + R E G
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 37/259 (14%)
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAK-TEKWRVDTVAFSALIKMYGMSGNYDACLS 302
P+ + A+++ V R +A+ ++ RA+ T RV ++A++ +Y SG +
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQV--YNAMMGVYSRSGKFSKAQE 246
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
+ M+ G P+++++N L+ A + G +PN
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINA---------------RLKSGGLTPNL----------- 280
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
A+ + ++ G D + YN L C+ N D A+K+F DM++ CQPD
Sbjct: 281 -------AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH-RCQPDL 332
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
+TY ++I++Y G EAE L E+ GF P+ + SL++ + + + + V +++ Q
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 483 LLDLGISPDDRFCDCLLYV 501
+ +G D+ + ++++
Sbjct: 393 MQKMGFGKDEMTYNTIIHM 411
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/216 (17%), Positives = 102/216 (47%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ ++N LK++ I+D+ + +++ + + G++P+ T++TL+ P +
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLM 985
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
++M + +P + S+I + + ++ A L++ ++ ++D + ++K+ S
Sbjct: 986 QQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDS 1045
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G+ + MK G +P + T + L+ + + ++A+ + + Y
Sbjct: 1046 GSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
++++ AY R++ + EMK++G + D ++
Sbjct: 1106 SSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWT 1141
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 154/338 (45%), Gaps = 1/338 (0%)
Query: 155 NPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF 214
N A FE F + + + YN+ + E A+ +F ++ G P++ T+
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY-DRAK 273
+ L+ + E +++M + ECE + +I + GNVD AL LY D
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
+ + LI SG ++ M G +PN YN L+ G+A A
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
A +++ MVK G P+ TY+ L+ C ++ L +KE+KE G + D V YN++
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
+ +EA+ +F +MK+S PD +TY SLI G V EA + NE+ R G
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
EPN+ +L+ Y + + + ++ ++ G SP+
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 171/372 (45%), Gaps = 16/372 (4%)
Query: 119 LDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVL 178
L+ P+ Q S ++V GLG+ M +L M ET +KP +V
Sbjct: 216 LEGFRPSLQTYSSLMV-GLGKRRDIDSVMGLLKEM---ETL---------GLKP--NVYT 260
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+ + +++ A ++ M G P+++T++ L+ T A E FEKM
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ +PD +++ ++ ++D + + + D V F+ L+ +GN+
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
M+ G PN+ TYN L+ + R R DA ++ M G P TY +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
Y ++ S AL +++MK KG + V N A G EA +IF +K G
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG-L 499
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
PD+ TY ++ YS +G++ EA LL+EM+ G EP+++ + SL++ KA R D+ K
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 479 IFNQLLDLGISP 490
+F ++ ++ + P
Sbjct: 560 MFMRMKEMKLKP 571
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 1/313 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + L + + A +++ M+ G +P+L T+S+L+ + ++M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ +P+ I V R G ++ A + R E D V ++ LI + D
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
V+ MK KP+ VTY LL + K + EM K+G P+ T+ L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
A C+A +A M+++G + YN L D+A+++F +M+S G
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG-V 429
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+P +TY I+ Y G A +M G PNI+A + ++ KA R + +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 479 IFNQLLDLGISPD 491
IF L D+G+ PD
Sbjct: 490 IFYGLKDIGLVPD 502
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 4/317 (1%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
Q I P H YN + + A +LF M GVKP T+ +
Sbjct: 392 QGILPNLHT--YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
A+E FEKM + P+ + +Y A+ G A ++ K D+V ++ +
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
+K Y G D + + S+M G +P+++ N+L+ + +A R +A ++ M +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P TY LL + ++A+ +++ M +KG + + +N LFD A+K
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+ M G C PD FTY ++I G+V EA ++M + + P+ + L +L+
Sbjct: 630 MLFKMMDMG-CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGV 687
Query: 468 GKAKRADDVVKIFNQLL 484
KA +D KI L
Sbjct: 688 VKASLIEDAYKIITNFL 704
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 167/400 (41%), Gaps = 33/400 (8%)
Query: 133 LVKGLGENVTEREAMIVLDNMV--------------------NPETALLAFEYFKQ-KIK 171
L+ GLG+N +EA+ + + MV N E L FK +
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKL-FDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
V YN + F +K+ E + F +++ V P+ +T TL+ S+ A
Sbjct: 639 CVPDVFTYNTII--FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 231 VEWFEKMPSFEC--EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW-RVDTVAFSAL 287
+ + C +P + +I +D A+S +R R +
Sbjct: 697 YKIITNFL-YNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 288 IKMYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
I+ N +++ K LG +P + TYN L+ + A A+ ++ ++ G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
P+ TY LL AY ++ ++ +YKEM + + + +N++ GN D+A+
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
++ D+ S D P TY LI+ S G++ EA+ L M+ G PN L++
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDR----FCDCLLYVA 502
+GKA AD +F +++ G+ PD + DCL V
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 134/323 (41%), Gaps = 5/323 (1%)
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
+KP + Y V + + + D A + F++M +G+ PN++ + + + +
Sbjct: 429 VKPTAYT--YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
A + F + PD M+ Y+++G +D A+ L D + ++LI
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
+ D ++ MK + KP +VTYN LL +G+ + ++A ++E MV+ G P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
N T+ L C+ AL + +M + G D YN + G EAM F
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL-NEMIRCGFEPNILALTSLVHLYG 468
MK PD T +L+ + +A ++ N + C +P L L+
Sbjct: 667 HQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 469 KAKRADDVVKIFNQLLDLGISPD 491
D+ V +L+ GI D
Sbjct: 725 AEAGIDNAVSFSERLVANGICRD 747
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+YN+ + F + + A LF M++ GV+P+L T+S LV C + + +F+++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV-DTVAFSALIKMYGMSGN 296
PD +I + ++ AL L++ KT + D +++LI G++G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ +Y++++ G +PN+ T+N L+ + + A +Y+ MV GFSPN TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 357 L 357
L
Sbjct: 1108 L 1108
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 260 GNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY 319
G ++ ++D + + DT + + K + G M+ G N +Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 320 NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
N L++ + +++ +A +Y M+ GF P+ TY++L+ + R + + + KEM+
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVT 439
G + + + + G +EA +I M G C PD TYT LI+ K+
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLIDALCTARKLD 310
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
A+ + +M +P+ + +L+ + + D V + ++++ G PD
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 302 SVYSDMKVLGAKPNMV----TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
S +S K + N+V T N +L A+ + + +++ M K + TY +
Sbjct: 100 SSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTI 159
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
++ + A ++M+E G ++ YN L + EAM+++ M G
Sbjct: 160 FKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG- 218
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
+P TY+SL+ + LL EM G +PN+ T + + G+A + ++
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 478 KIFNQLLDLGISPD 491
+I ++ D G PD
Sbjct: 279 EILKRMDDEGCGPD 292
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 3/317 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V N L F A L D+M++ G +P+ +TF+TLV + +AV E
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M C+PD ++I + G D+AL+L ++ + K D V +S +I
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ D L+++++M G +P++ TY++L+ + R DA + +M++ +PN T+
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKS 414
+L+ A+ + +A ++ EM ++ D + V YN L + C H DEA +IF M S
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH-DRLDEAQQIFTLMVS 373
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
DC PD TY +LIN + KV + L +M R G N + T+L+H + +A D
Sbjct: 374 K-DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 475 DVVKIFNQLLDLGISPD 491
+ +F Q++ G+ P+
Sbjct: 433 NAQMVFKQMVSDGVHPN 449
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 3/290 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
+ ++KI P +VV +N + F + AEKLFDEM+QR + PN++T+++L+
Sbjct: 300 DMLERKINP--NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+A + F M S +C PD ++I + + V + L+ +TV
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI + + + D V+ M G PN++TYN LL + + + A ++E +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
K+ P+ TY + + C+A ED ++ + KG D + YN + G +
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
EA +F MK G PD+ TY +LI + G + L+ EM C F
Sbjct: 538 EAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 177/397 (44%), Gaps = 6/397 (1%)
Query: 99 QLLKKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMI-VLDNMV 154
Q+++ Y + L L N + V+ M+VKG ++ A+I L
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 155 NPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF 214
P+ AL +K K VV+Y+ + + + A LF EM +G++P++ T+
Sbjct: 220 EPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
S+L++C A M + P+ S+I +A+ G + A L+D
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
+ V +++LI + M D +++ M P++VTYN L+ +AK+ D
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
++ +M + G N TY L+ + +A ++A V+K+M G + + YN L D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
G ++AM +F ++ S +PD +TY + GKV + L + G +
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
P+++A +++ + K ++ +F ++ + G PD
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 166/332 (50%), Gaps = 15/332 (4%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
L+++ +++K+ +R+ +L+ LKL A LF EM++ P+++ FS L++
Sbjct: 27 LSYDGYREKL--SRNALLH---LKL-------DEAVDLFGEMVKSRPFPSIVEFSKLLSA 74
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD 280
+ + + EKM + MI R + AL++ + +
Sbjct: 75 IAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPS 134
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
V ++L+ + +++ M +G +P+ VT+ L++ + + +A +A + E
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHF 399
MV G P+ TY A++ C+ + AL++ +M EKGK + D V+Y+ + D +
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKY 253
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
+ D+A+ +F +M + G +PD FTY+SLI+ G+ ++A LL++M+ PN++
Sbjct: 254 RHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
SL+ + K + + K+F++++ I P+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 3/332 (0%)
Query: 162 AFEYFKQKIK--PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + F + +K P +V ++ L ++K F ++M GV NL T++ ++
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C S A+ KM P S++ + + A++L D+ ++
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
DTV F+ L+ +++ M V G +P++VTY ++ + + A +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+M K + Y+ ++ + C+ R +DAL+++ EM KG D Y+ L ++
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G +A ++ +DM P+ T+ SLI+ ++ GK+ EAE L +EMI+ +PNI+
Sbjct: 289 GRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
SL++ + R D+ +IF ++ PD
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV YN + F + K +LF +M +RG+ N +T++TL+ S A F+
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M S P+ +++ + G ++ A+ +++ + K D ++ + + +G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ ++ + + G KP+++ YN ++ + +A T++ +M ++G P+ TY
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
L++A+ R + + KEM+ D Y ++ DM H G D+
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM-LHDGRLDKG 608
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ V Y + F + D A+ +F +M+ GV PN++T++TL+ KA+ F
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
E + + EPD M + G V+ L+ + + D +A++ +I +
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G + +++ MK G P+ TYN L+ A R + + +EM F+ + TY
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Query: 355 AALLQAYCRARCSEDALSV 373
+ R + L V
Sbjct: 594 GLVTDMLHDGRLDKGFLEV 612
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 176/355 (49%), Gaps = 7/355 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV--ACASTCSVPHKAVEW 233
V YN + + + RA+++F EML+ G+ P+ T+ +L+ AC V + V
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV-- 362
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
F M S + PD +SM+ ++ R GN+D AL ++ K D V ++ LI+ Y
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G +++ ++M G ++VTYN +L+ + + K +A ++ EM + P+ T
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
L+ +C+ ++A+ ++++MKEK +D V YN L D G+ D A +I+ADM
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
S + P +Y+ L+N G + EA + +EMI +P ++ S++ Y ++ A
Sbjct: 543 SK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 474 DDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVV 528
D +++ G PD + L+Y + + + K ++K + + G +V
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIY--GFVREENMSKAFGLVKKMEEEQGGLV 654
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 195/409 (47%), Gaps = 12/409 (2%)
Query: 96 RAKQLLKKSYAATSSPLEKLAKSL--DSCNP-----TEQQVSEMLVKGLGENVTEREAMI 148
RAK++ + + SP +SL ++C TE+ S+M + + ++ +M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 149 VL-DNMVNPETALLAFEYFKQK-IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG 206
L N + AL+ F K+ + P V+Y + ++ + A L +EMLQ+G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDN--VIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
+++T++T++ + +A + F +M PD +I + ++GN+ A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
L+ + K ++ R+D V ++ L+ +G G+ D +++DM P ++Y+ L+ A+
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
+A +++EM+ P ++++ YCR+ + D S ++M +G D
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKS-SGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+ YN L N +A + M+ G PD FTY S+++ + ++ EAE +L
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRF 494
+MI G P+ T +++ + + +I +++L G SPDD+F
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 157/343 (45%), Gaps = 25/343 (7%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKL---FDEMLQRGVKPNLITFSTL 217
LA+ +++ + + +Y + + + KD G+ EK+ ++ ++GV P+++T++TL
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKD-GKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 218 VACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK---T 274
++ S+ + +A E MP P +Y Y + N Y+RAK
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPG-------VYTYNTVINGLCKHGKYERAKEVFA 329
Query: 275 EKWRV----DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAK 330
E R D+ + +L+ G+ V+SDM+ P++V +++++ R+
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
A + + + G P+ Y L+Q YCR A+++ EM ++G +D V YN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 391 -MLFDMCAH--FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
+L +C G AD K+F +M PD++T T LI+ + +G + A L +
Sbjct: 450 TILHGLCKRKMLGEAD---KLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
M +++ +L+ +GK D +I+ ++ I P
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
C +D++ +I Y + + A + +++ + V A +ALI G +
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
VY ++ G N+ T N ++ A+ + + T ++ + G P+ TY L+ AY
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQP 420
E+A + M KG YN + + +C H G + A ++FA+M SG P
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH-GKYERAKEVFAEMLRSG-LSP 338
Query: 421 DNFTYTSLINMYSC-MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
D+ TY SL+ M +C G V E E + ++M P+++ +S++ L+ ++ D +
Sbjct: 339 DSTTYRSLL-MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 480 FNQLLDLGISPDD 492
FN + + G+ PD+
Sbjct: 398 FNSVKEAGLIPDN 410
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 163/325 (50%), Gaps = 2/325 (0%)
Query: 176 VVLYNVTLK-LFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
V +YN ++ L + + A +F M + KP T++ ++ S + + + +
Sbjct: 228 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 287
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M S +C+P+ +++ +AR G + A ++++ + + D ++AL++ Y +
Sbjct: 288 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 347
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G ++S M+ +G +P+ +YN ++ A GRA DA+ ++EEM + G +P ++
Sbjct: 348 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
LL AY +AR ++ KEM E G + D + N + ++ G + KI A+M+
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME- 466
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
+G C D TY LIN+Y G + E L E+ F P+++ TS + Y + K
Sbjct: 467 NGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYV 526
Query: 475 DVVKIFNQLLDLGISPDDRFCDCLL 499
+++F +++D G +PD LL
Sbjct: 527 KCLEVFEEMIDSGCAPDGGTAKVLL 551
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+P+++ +N L+ A G+ + ++A+++Y +++++ + P TYA L++AYC A E A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 373 VYKEMKEKG---KDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
V EM+ K + +YN + + GN +EA+ +F MK C+P TY +
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTTETYNLM 270
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
IN+Y K + L EM +PNI T+LV+ + + + +IF QL + G+
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 489 SPD 491
PD
Sbjct: 331 EPD 333
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + F+ LI YG Y S+Y + P TY L+ A A A+ +
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 340 EEMVKNGFSP---NWPTYAALLQAYCRARC-SEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
EM + SP Y A ++ + + +E+A+ V++ MK YN++ ++
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
+ + K++ +M+S C+P+ TYT+L+N ++ G +AE + ++ G EP
Sbjct: 274 YGKASKSYMSWKLYCEMRSH-QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
++ +L+ Y +A +IF+ + +G PD
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 35/254 (13%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+AE++F+++ + G++P++ ++ L+ S P+ A E F M CEPD M+
Sbjct: 317 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 376
Query: 254 YVYARIG----------------------NVDMALSLYDRAK-------------TEKWR 278
Y R G + + LS Y +A+
Sbjct: 377 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 436
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
DT ++++ +YG G + + ++M+ ++ TYN L+ G+A + +
Sbjct: 437 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 496
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ E+ + F P+ T+ + + AY R + L V++EM + G D +L C+
Sbjct: 497 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 556
Query: 399 FGNADEAMKIFADM 412
++ + M
Sbjct: 557 EEQVEQVTSVLRTM 570
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + + AE +F+EM + G+ P + + L++ S K ++M
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
EPD + SM+ +Y R+G + + D ++ LI +YG +G +
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 491
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++ ++K +P++VT+ + + A R K ++EEM+ +G +P+ T LL
Sbjct: 492 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 551
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
A E SV + M KG V ++
Sbjct: 552 SACSSEEQVEQVTSVLRTM-HKGVTVSSLV 580
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 163/325 (50%), Gaps = 2/325 (0%)
Query: 176 VVLYNVTLK-LFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
V +YN ++ L + + A +F M + KP T++ ++ S + + + +
Sbjct: 250 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 309
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M S +C+P+ +++ +AR G + A ++++ + + D ++AL++ Y +
Sbjct: 310 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 369
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G ++S M+ +G +P+ +YN ++ A GRA DA+ ++EEM + G +P ++
Sbjct: 370 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
LL AY +AR ++ KEM E G + D + N + ++ G + KI A+M+
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME- 488
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
+G C D TY LIN+Y G + E L E+ F P+++ TS + Y + K
Sbjct: 489 NGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYV 548
Query: 475 DVVKIFNQLLDLGISPDDRFCDCLL 499
+++F +++D G +PD LL
Sbjct: 549 KCLEVFEEMIDSGCAPDGGTAKVLL 573
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+P+++ +N L+ A G+ + ++A+++Y +++++ + P TYA L++AYC A E A
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 373 VYKEMKEKG---KDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
V EM+ K + +YN + + GN +EA+ +F MK C+P TY +
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTTETYNLM 292
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
IN+Y K + L EM +PNI T+LV+ + + + +IF QL + G+
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 489 SPD 491
PD
Sbjct: 353 EPD 355
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + F+ LI YG Y S+Y + P TY L+ A A A+ +
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 340 EEMVKNGFSP---NWPTYAALLQAYCRARC-SEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
EM + SP Y A ++ + + +E+A+ V++ MK YN++ ++
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
+ + K++ +M+S C+P+ TYT+L+N ++ G +AE + ++ G EP
Sbjct: 296 YGKASKSYMSWKLYCEMRSH-QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
++ +L+ Y +A +IF+ + +G PD
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 390
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 35/254 (13%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+AE++F+++ + G++P++ ++ L+ S P+ A E F M CEPD M+
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 398
Query: 254 YVYARIG----------------------NVDMALSLYDRAK-------------TEKWR 278
Y R G + + LS Y +A+
Sbjct: 399 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 458
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
DT ++++ +YG G + + ++M+ ++ TYN L+ G+A + +
Sbjct: 459 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 518
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ E+ + F P+ T+ + + AY R + L V++EM + G D +L C+
Sbjct: 519 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 578
Query: 399 FGNADEAMKIFADM 412
++ + M
Sbjct: 579 EEQVEQVTSVLRTM 592
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + + AE +F+EM + G+ P + + L++ S K ++M
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 453
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
EPD + SM+ +Y R+G + + D ++ LI +YG +G +
Sbjct: 454 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 513
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++ ++K +P++VT+ + + A R K ++EEM+ +G +P+ T LL
Sbjct: 514 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 573
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
A E SV + M KG V ++
Sbjct: 574 SACSSEEQVEQVTSVLRTM-HKGVTVSSLV 602
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 163/347 (46%), Gaps = 8/347 (2%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E LL E + P+ V+YNV + + D R KL D M +G PN +T++T
Sbjct: 240 EAVLLLDEMQSEGCSPSP--VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ KAV E+M S +C P+D ++I + A+ L +
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ ++ +S LI G + +S++ M G KPN+V Y+ L+ + R + +AK
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
I M+ +G PN TY++L++ + + E+A+ V+KEM + G +K Y++L D
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE-- 454
G EAM +++ M + G +PD Y+S+I +G + A L +EM+ C E
Sbjct: 478 CGVGRVKEAMMVWSKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLYHEML-CQEEPK 535
Query: 455 --PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
P+++ L+ K V + N +LD G PD C+ L
Sbjct: 536 SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 6/344 (1%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEM----LQRGVKPNL 211
P+ A+ F + + R V +N L + + R + +D + + + PN
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 212 ITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR 271
++F+ ++ +A+E F MP +C PD +++ + +D A+ L D
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 272 AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
++E V ++ LI G+ + +M + G PN VTYN L++ + +
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
A ++ E MV + PN TY L+ + R + DA+ + M+E+G +++ +Y++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 392 LFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRC 451
L G A+EAM ++ M G C+P+ Y+ L++ GK EA+ +LN MI
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 452 GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC 495
G PN +SL+ + K ++ V+++ ++ G S ++FC
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS-RNKFC 469
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 157/303 (51%), Gaps = 3/303 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M++ G KP+ TF+TL+ + +AV ++M C+PD
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+++ + G++D+ALSL + + K D V ++ +I + D L+++++M
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +P++ TY++L+ + R DA + +M++ +PN T++AL+ A+ + +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A +Y EM ++ D D Y+ L + C H DEA +F M S DC P+ TY++L
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMISK-DCFPNVVTYSTL 404
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I + +V E L EM + G N + T+L+H + +A+ D+ +F Q++ +G+
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 489 SPD 491
P+
Sbjct: 465 HPN 467
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 154/298 (51%), Gaps = 3/298 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF +M++ P+++ F+ L++ + + + E+M + D + I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + +AL++ + + D V S+L+ Y S +++ M +G KP
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ T+ L++ + +A +A + ++MV+ G P+ TY ++ C+ + ALS+
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 375 KEMKEKGK-DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
K+M EKGK + D V+YN + D + + D+A+ +F +M + G +PD FTY+SLI+
Sbjct: 247 KKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLISCLC 304
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+ ++A LL++MI PN++ ++L+ + K + + K++++++ I PD
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 145/314 (46%), Gaps = 4/314 (1%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
+K K VV+YN + + K A LF EM +G++P++ T+S+L++C
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
A M + P+ +++I + + G + A LYD D +S+L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I + M D ++ M PN+VTY+ L+ +AKR + ++ EM + G
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
N TY L+ + +AR ++A V+K+M G + + YN+L D G +AM
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+F ++ S +PD +TY +I GKV + L + G PN++A +++ +
Sbjct: 490 VFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 468 ---GKAKRADDVVK 478
G + AD ++K
Sbjct: 549 CRKGSKEEADSLLK 562
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 147/305 (48%), Gaps = 6/305 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
+ ++KI P +VV ++ + F + AEKL+DEM++R + P++ T+S+L+
Sbjct: 318 DMIERKINP--NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+A FE M S +C P+ +++I + + V+ + L+ +TV
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI + + + D V+ M +G PN++TYN LL + + + A ++E +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
++ P+ TY +++ C+A ED ++ + KG + + YN + G+ +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN---ILAL 460
EA + MK G P++ TY +LI G + L+ EM CGF + I +
Sbjct: 556 EADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 461 TSLVH 465
T+++H
Sbjct: 615 TNMLH 619
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 36/332 (10%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L D+M+QRG +P+L+T+ T+V A+ +KM + E D + ++I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ ++D AL+L+ + R D +S+LI G + + SDM P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVK--------------NGFS------------ 348
N+VT++ L+ A + + +A+ +Y+EM+K NGF
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 349 ---------PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
PN TY+ L++ +C+A+ E+ + +++EM ++G + V Y L
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
+ D A +F M S G P+ TY L++ GK+ +A + + R EP+I
Sbjct: 447 RDCDNAQMVFKQMVSVG-VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
++ KA + +D ++F L G+SP+
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 147/316 (46%), Gaps = 1/316 (0%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P +V +N L ++ F L ++M G+ +L T+S + C S
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EPD +S++ Y + A++L D+ ++ DT F+ LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ +++ M G +P++VTY ++ + + A ++ ++M K
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
+ Y ++ C+ + +DAL+++ EM KG D Y+ L ++G +A ++
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+DM P+ T+++LI+ + GK+ EAE L +EMI+ +P+I +SL++ +
Sbjct: 316 LSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 469 KAKRADDVVKIFNQLL 484
R D+ +F ++
Sbjct: 375 MHDRLDEAKHMFELMI 390
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
I VD A+ L+ + V F+ L+ ++ +S+ M+ LG ++ T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
Y+ + R + A + +M+K G+ P+ T ++LL YC ++ DA+++ +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
E G D + L A EA+ + M G CQPD TY +++N G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDI 239
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
A +LL +M + E +++ +++ K K DD + +F ++ + GI PD
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
++ +KP ++ Y + L I AE+ F EM+++G+ P+ + ++TL+
Sbjct: 309 RKGLKPNSYI--YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
A ++F +M S + PD ++I + +IG++ A L+ + D+V F+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
LI Y +G+ V++ M G PN+VTY L+ + + A + EM K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
PN TY +++ C++ E+A+ + E + G + D V Y L D G D+A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+I +M G QP T+ L+N + G + + E LLN M+ G PN SLV
Sbjct: 547 EILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDR 493
Y I+ + G+ PD +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGK 632
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 180/392 (45%), Gaps = 17/392 (4%)
Query: 115 LAKSLDSCNPTEQQVSEMLVKGLGENVTERE--AMIVLDNMVNPETALLAFEYFKQKIKP 172
L S+DSCN ++S+ K + RE + V N V ++ F +IK
Sbjct: 206 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN-VASYNIVIHFVCQLGRIKE 264
Query: 173 ARHVVL-------------YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A H++L Y+ + + + + KL + M ++G+KPN + +++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A E F +M PD + ++I + + G++ A + +
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + ++A+I + G+ ++ +M G +P+ VT+ L+ +A +DA ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
M++ G SPN TY L+ C+ + A + EM + G + YN + +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
GN +EA+K+ + +++G D TYT+L++ Y G++ +A+ +L EM+ G +P I+
Sbjct: 505 GNIEEAVKLVGEFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L++ + +D K+ N +L GI+P+
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 21/381 (5%)
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYF----KQKIKPARHVVLYNV 181
E+ SEM+ +G+ + +I D A ++F + I P V+ Y
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLI--DGFCKRGDIRAASKFFYEMHSRDITP--DVLTYTA 391
Query: 182 TLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH--KAVEWFEKMPS 239
+ F +I D A KLF EM +G++P+ +TF+ L+ C H A M
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN--GYCKAGHMKDAFRVHNHMIQ 449
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV----DTVAFSALIKMYGMSG 295
C P+ ++I + G++D A L E W++ + +++++ SG
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLH----EMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
N + + + + + G + VTY L+ A ++ A+ I +EM+ G P T+
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ +C ED + M KG + +N L N A I+ DM S
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD TY +L+ + + EA L EM GF ++ + L+ + K K+ +
Sbjct: 626 G-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 476 VVKIFNQLLDLGISPDDRFCD 496
++F+Q+ G++ D D
Sbjct: 685 AREVFDQMRREGLAADKEIFD 705
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 1/291 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A ++ + M+Q G PN++T++TL+ A E +M +P+ S++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ GN++ A+ L + DTV ++ L+ Y SG D + +M G +P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+VT+N L+ D + + M+ G +PN T+ +L++ YC + A ++Y
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
K+M +G D Y L N EA +F +MK G + TY+ LI +
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS-TYSVLIKGFLK 678
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
K EA + ++M R G + K KR D +V +++++
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
++ +KP ++ Y + L I AE+ F EM+++G+ P+ + ++TL+
Sbjct: 309 RKGLKPNSYI--YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
A ++F +M S + PD ++I + +IG++ A L+ + D+V F+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
LI Y +G+ V++ M G PN+VTY L+ + + A + EM K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
PN TY +++ C++ E+A+ + E + G + D V Y L D G D+A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+I +M G QP T+ L+N + G + + E LLN M+ G PN SLV
Sbjct: 547 EILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDR 493
Y I+ + G+ PD +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGK 632
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 180/392 (45%), Gaps = 17/392 (4%)
Query: 115 LAKSLDSCNPTEQQVSEMLVKGLGENVTERE--AMIVLDNMVNPETALLAFEYFKQKIKP 172
L S+DSCN ++S+ K + RE + V N V ++ F +IK
Sbjct: 206 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN-VASYNIVIHFVCQLGRIKE 264
Query: 173 ARHVVL-------------YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A H++L Y+ + + + + KL + M ++G+KPN + +++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A E F +M PD + ++I + + G++ A + +
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + ++A+I + G+ ++ +M G +P+ VT+ L+ +A +DA ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
M++ G SPN TY L+ C+ + A + EM + G + YN + +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
GN +EA+K+ + +++G D TYT+L++ Y G++ +A+ +L EM+ G +P I+
Sbjct: 505 GNIEEAVKLVGEFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L++ + +D K+ N +L GI+P+
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 21/381 (5%)
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYF----KQKIKPARHVVLYNV 181
E+ SEM+ +G+ + +I D A ++F + I P V+ Y
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLI--DGFCKRGDIRAASKFFYEMHSRDITP--DVLTYTA 391
Query: 182 TLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH--KAVEWFEKMPS 239
+ F +I D A KLF EM +G++P+ +TF+ L+ C H A M
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN--GYCKAGHMKDAFRVHNHMIQ 449
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV----DTVAFSALIKMYGMSG 295
C P+ ++I + G++D A L E W++ + +++++ SG
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLH----EMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
N + + + + + G + VTY L+ A ++ A+ I +EM+ G P T+
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ +C ED + M KG + +N L N A I+ DM S
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD TY +L+ + + EA L EM GF ++ + L+ + K K+ +
Sbjct: 626 G-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 476 VVKIFNQLLDLGISPDDRFCD 496
++F+Q+ G++ D D
Sbjct: 685 AREVFDQMRREGLAADKEIFD 705
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 1/291 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A ++ + M+Q G PN++T++TL+ A E +M +P+ S++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ GN++ A+ L + DTV ++ L+ Y SG D + +M G +P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+VT+N L+ D + + M+ G +PN T+ +L++ YC + A ++Y
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
K+M +G D Y L N EA +F +MK G + TY+ LI +
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS-TYSVLIKGFLK 678
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
K EA + ++M R G + K KR D +V +++++
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 158/303 (52%), Gaps = 3/303 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M++ G +P+ ITF+TL+ + +AV ++M C+P+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
++ + G++D+A +L ++ + K + V +S +I + D L+++++M+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN++TY++L+ + +R DA + +M++ +PN T+ AL+ A+ + +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A +Y EM ++ D D Y+ L + C H DEA +F M S DC P+ TY +L
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMISK-DCFPNVVTYNTL 406
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
IN + ++ E L EM + G N + T+L+H + +A+ D+ +F Q++ G+
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 489 SPD 491
P+
Sbjct: 467 HPN 469
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 177/399 (44%), Gaps = 10/399 (2%)
Query: 99 QLLKKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMIVLDNMVN 155
Q+++ Y + L L N + V+ M+ +G N+ +V++ +
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG--VVVNGLCK 237
Query: 156 PETALLAFEYFKQKIKPAR---HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLI 212
LAF K++ A+ +VV+Y+ + + + A LF EM +GV+PN+I
Sbjct: 238 RGDIDLAFNLL-NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 213 TFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA 272
T+S+L++C A M + P+ ++I + + G + A LYD
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 273 KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
D +S+LI + M D ++ M PN+VTYN L+ +AKR
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
+ ++ EM + G N TY L+ + +AR ++A V+K+M G + + YN L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
D G ++AM +F ++ S +P +TY +I GKV + L + G
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+P+++ +++ + + ++ +F ++ + G PD
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 156/356 (43%), Gaps = 38/356 (10%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P + +N L ++K F L ++M + G+ NL T++ L+ C S
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EP +S++ Y + A++L D+ +R DT+ F+ LI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN----------------NLLYAMGRAK-- 330
+ +++ M G +PN+VTY NLL M AK
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 331 -----------------RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
DA ++ EM G PN TY++L+ C DA +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM-KSSGDCQPDNFTYTSLINMY 432
+M E+ + + V +N L D G EA K++ +M K S D PD FTY+SLIN +
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGF 375
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
++ EA+ + MI PN++ +L++ + KAKR D+ V++F ++ G+
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
D + ++ M P++ +N LL A+ + K+ ++ E+M + G S N TY L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ +CR AL++ +M + G + V + L + H +A+ + M G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG- 185
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
+PD T+T+LI+ K +EA AL++ M++ G +PN++ +V+ G KR D
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGD 240
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
FS Y +L+ + +DA+ ++ M + +N L A D +
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+ M+ G + +TY LIN + +++ A ALL +M++ G+EP+I+ L+SL++
Sbjct: 106 SLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 467 YGKAKRADDVVKIFNQLLDLGISPD 491
Y KR D V + +Q++++G PD
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPD 189
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 162/319 (50%), Gaps = 7/319 (2%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V N L F A L D+M++ G KP+ +TF+TL+ + +AV +
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M C+PD +++ + G+ D+AL+L ++ + K + V +S +I
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ D L+++++M+ G +PN++TY++L+ + R DA + +M++ +PN T++
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML---FDMCAHFGNADEAMKIFADM 412
AL+ A+ + A +Y+EM ++ D + Y+ L F M G A + +++
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI-- 385
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
DC P+ TY +LIN + +V + L EM + G N + T+L+H + +A+
Sbjct: 386 --RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 473 ADDVVKIFNQLLDLGISPD 491
D+ +F Q++ +G+ P+
Sbjct: 444 CDNAQMVFKQMVSVGVHPN 462
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 149/321 (46%), Gaps = 5/321 (1%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
+P ++ ++ L ++ F ++M G+ NL T++ L+ C CS A
Sbjct: 73 RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLA 132
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ KM EPD S++ + + A++L D+ ++ DTV F+ LI
Sbjct: 133 LALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ +++ M G +P++VTY ++ + + A + +M N
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
Y+ ++ + C+ R +DAL+++ EM+ KG + + Y+ L ++G +A ++ +
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
DM P+ T+++LI+ + GK+ +AE L EMI+ +PNI +SL++ +
Sbjct: 313 DMIER-KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 471 KRADDVVKIFNQLLDLGISPD 491
R + Q+L+L I D
Sbjct: 372 DRLGEA----KQMLELMIRKD 388
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
K +VV+Y+ + + + A LF EM +GV+PN+IT+S+L++C A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
M + P+ +++I + + G + A LY+ + +S+LI
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ M + M PN+VTYN L+ +AKR ++ EM + G N
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
TY L+ + +AR ++A V+K+M G + + YN+L D G +AM +F
Sbjct: 428 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 487
Query: 411 DMKSSGDCQPDNFTYTSLI 429
++ S +PD +TY +I
Sbjct: 488 YLQRS-TMEPDIYTYNIMI 505
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 36/313 (11%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L D M+QRG +P+L+T+ +V A+ KM + + E + + +++I
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ + D AL+L+ + + R + + +S+LI G + + SDM P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVK--------------NGFS------------ 348
N+VT++ L+ A + + A+ +YEEM+K NGF
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 349 ---------PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
PN TY L+ +C+A+ + + +++EM ++G + V Y L
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
+ D A +F M S G P+ TY L++ GK+ +A + + R EP+I
Sbjct: 442 RDCDNAQMVFKQMVSVG-VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Query: 460 LTSLVHLYGKAKR 472
++ KA +
Sbjct: 501 YNIMIEGMCKAGK 513
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
+D A+ L+ + + FS L+ +D +S M++LG N+ TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
L+ R R A + +M+K G+ P+ T +LL +C DA+++ +M E G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
D V + L A EA+ + M G CQPD TY +++N G A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
LLN+M E N++ ++++ K + DD + +F ++ + G+ P+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 176/418 (42%), Gaps = 42/418 (10%)
Query: 121 SCN--PTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPET-ALLAFEYFKQ-KIKPARHV 176
+CN E V EM +G+ + M+ MV E L+ F+ K+ P V
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT--V 484
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V Y + L+ ++ +A ++ M + GVK NL T+S ++ A FE
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M +PD L ++I + +GN+D A+ + + R T F +I Y SG+
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
L V+ M+ G P + T+N L+ + ++ A I +EM G S N TY
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 357 LLQAY-----------------------------------CRARCSEDALSVYKEMKEKG 381
++Q Y C++ + AL+V KEM +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+ +YN+L D A G+ EA + MK G +PD TYTS I+ S G + A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG-VKPDIHTYTSFISACSKAGDMNRA 783
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ EM G +PNI T+L+ + +A + + + ++ +GI PD CLL
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 142/315 (45%), Gaps = 1/315 (0%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+Y + + +D A +M + G++ +L+T+S +V S A WF++
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ ++ +IY + + N++ A +L + E + ++ Y M +
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
L V+ +K G P +VTY L+ + + A + M + G N TY+ +
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ + + + +A +V+++M ++G D +LYN + GN D A++ +M+
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
+P T+ +I+ Y+ G + + + + M RCG P + L++ + ++ + V
Sbjct: 586 -RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 478 KIFNQLLDLGISPDD 492
+I +++ G+S ++
Sbjct: 645 EILDEMTLAGVSANE 659
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 122/307 (39%), Gaps = 45/307 (14%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSA 250
D R+ ++FD M + G P + TF+ L+ KAVE ++M +++
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM--- 307
++ YA +G+ A + R + E VD + AL+K SG + L+V +M
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 308 --------------------------------KVLGAKPNMVTYNNLLYAMGRAKRARDA 335
K G KP++ TY + + A +A A
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
EEM G PN TY L++ + RA E ALS Y+EMK G DK +Y+ L
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Query: 396 CAHFGNADEA------MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI 449
+ EA M I +M +G + ++ C+ K+ + L E +
Sbjct: 844 LLSRASIAEAYIYSGVMTICKEMVEAGLI----VDMGTAVHWSKCLCKIEASGGELTETL 899
Query: 450 RCGFEPN 456
+ F P+
Sbjct: 900 QKTFPPD 906
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
R+ +YN+ + + D A L +M + GVKP++ T+++ ++ S ++A +
Sbjct: 727 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
E+M + +P+ ++I +AR SL ++A
Sbjct: 787 IEEMEALGVKPNIKTYTTLIKGWAR-------ASLPEKA--------------------- 818
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA-MGRAKRAR-----DAKTIYEEMVKNGF 347
LS Y +MK +G KP+ Y+ LL + + RA A TI +EMV+ G
Sbjct: 819 -------LSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGL 871
Query: 348 SPNWPTYAALLQAYCRARCSEDALS 372
+ T + C+ S L+
Sbjct: 872 IVDMGTAVHWSKCLCKIEASGGELT 896
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 154/296 (52%), Gaps = 3/296 (1%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M++ G KP+ TF+TL+ + +AV ++M C+PD
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+++ + G++D+AL+L ++ + + + + V F+ +I + + + ++++M+
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN+VTYN+L+ + R DA + M++ +PN T+ AL+ A+ + +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A +++EM ++ D D + YN+L + C H DEA ++F M S DC P+ TY +L
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMH-NRLDEAKQMFKFMVSK-DCLPNIQTYNTL 404
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
IN + +V + L EM + G N + T+++ + +A D +F Q++
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF +M++ P+++ F+ L++ + + + E+M + D + I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + +AL++ + + D V S+L+ Y S +++ M +G KP
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ T+ L++ + +A +A + ++MV+ G P+ TY ++ C+ + AL++
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+M+ + V++N + D + + + A+ +F +M++ G +P+ TY SLIN
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCN 305
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+ ++A LL+ M+ PN++ +L+ + K + + K+ +++ I PD
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 149/337 (44%), Gaps = 9/337 (2%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P +V +N L ++ F L ++M G+ +L T+S + C S
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EPD +S++ Y + A++L D+ ++ DT F+ LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ +++ M G +P++VTY ++ + + A + +M
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
N + ++ + C+ R E A+ ++ EM+ KG + V YN L + ++G +A ++
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
++M P+ T+ +LI+ + GK+ EAE L EMI+ +P+ + L++ +
Sbjct: 316 LSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 469 KAKRADDVVKIFNQLLDLGISPD--------DRFCDC 497
R D+ ++F ++ P+ + FC C
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 146/327 (44%), Gaps = 7/327 (2%)
Query: 168 QKIKPAR---HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTC 224
K++ AR +VV++N + + + A LF EM +G++PN++T+++L+ C
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 225 SVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
A M + P+ ++I + + G + A L++ DT+ +
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+ LI + M D ++ M PN+ TYN L+ + KR D ++ EM +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
G N TY ++Q + +A + A V+K+M D + Y++L +G D
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
A+ IF ++ S + + + F Y ++I GKV EA L + +P+++ +++
Sbjct: 487 ALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMI 542
Query: 465 HLYGKAKRADDVVKIFNQLLDLGISPD 491
+ + +F ++ + G P+
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPN 569
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 1/233 (0%)
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
I VD A+ L+ + V F+ L+ ++ +S+ M+ LG ++ T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
Y+ + R + A + +M+K G+ P+ T ++LL YC ++ DA+++ +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
E G D + L A EA+ + M G CQPD TY +++N G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDI 239
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
A LLN+M + N++ +++ K + + V +F ++ GI P+
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + F + K +LF EM QRG+ N +T++T++ A F++M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
S D + +++ G +D AL ++ + + ++ ++ +I+ +G
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++ + + KP++VTYN ++ + + ++A ++ +M ++G PN TY L+
Sbjct: 521 EAWDLFCSLSI---KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
+A R + + KEM+ G D +++ +M H G D++
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM-LHDGRLDKS 623
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 3/303 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M +PN +TF+TL+ + +AV ++M + C+PD
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+++ + G++D+ALSL + + K D V ++ +I N + L+++++M
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN+VTYN+L+ + R DA + +M++ +PN T++AL+ A+ + +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A +Y EM ++ D D Y+ L + C H DEA +F ++ S DC P+ TY +L
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMF-ELMISKDCFPNVVTYNTL 401
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I + +V E L EM + G N + +L+ +A D KIF +++ G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 489 SPD 491
PD
Sbjct: 462 PPD 464
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 1/324 (0%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
+K K VV+Y + K+ A LF EM +G++PN++T+++L+ C
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
A M + P+ +++I + + G + A LYD D +S+L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I + M D ++ M PN+VTYN L+ +AKR + ++ EM + G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
N TY L+Q +A + A ++K+M G D + Y++L D +G ++A+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+F ++ S +PD +TY +I GKV + L + G +PN++ T+++ +
Sbjct: 487 VFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 468 GKAKRADDVVKIFNQLLDLGISPD 491
+ ++ +F ++ + G P+
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPN 569
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 150/298 (50%), Gaps = 3/298 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF EM+Q P+++ F+ L++ + + + E+M + D +I
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + +AL++ + + D V S+L+ Y +++ M V+ +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N VT+N L++ + +A +A + + MV G P+ TY ++ C+ + ALS+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 375 KEMKEKGK-DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
K+M EKGK + D V+Y + D ++ N ++A+ +F +M + G +P+ TY SLI
Sbjct: 244 KKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLC 301
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+ ++A LL++MI PN++ ++L+ + K + + K++++++ I PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 162/339 (47%), Gaps = 5/339 (1%)
Query: 130 SEMLVKGLGENVTEREAMI-VLDNMVN-PETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
+EM KG+ NV ++I L N + + L + ++KI P +VV ++ + F
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP--NVVTFSALIDAFV 336
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+ AEKL+DEM++R + P++ T+S+L+ +A FE M S +C P+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
++I + + V+ + L+ +TV ++ LI+ +G+ D ++ M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
G P+++TY+ LL + + + A ++E + K+ P+ TY +++ C+A
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
ED ++ + KG + ++Y + G +EA +F +MK G P++ TY +
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNT 575
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
LI G + L+ EM CGF + ++ ++++
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 170/354 (48%), Gaps = 16/354 (4%)
Query: 122 CNPTEQQVSEMLVKGLGENVTEREAMI---VLDNMVNPETALLAFEYFKQ----KIKPAR 174
C + ++ L+K + + E + +I ++D + N + A F + I+P
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-- 288
Query: 175 HVVLYNVTLKLFREIKDFGR---AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
+VV YN L R + ++GR A +L +M++R + PN++TFS L+ +A
Sbjct: 289 NVVTYN---SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ +++M +PD +S+I + +D A +++ ++ + V ++ LIK +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
+ + + ++ +M G N VTYN L+ + +A A+ I+++MV +G P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
TY+ LL C+ E AL V++ +++ + D YN++ + G ++ +F
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ G +P+ YT++I+ + G EA+AL EM G PN +L+
Sbjct: 526 LSLKG-VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 168/365 (46%), Gaps = 16/365 (4%)
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKL 185
+ QV E+ V+ LG A +LD + E L V Y L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLL--------------DVRAYTTILHA 219
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP-HKAVEWFEKMPSFECEP 244
+ + +A LF+ M + G P L+T++ ++ K + ++M S +
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D+ ++++ AR G + A + K+ + TV ++AL++++G +G Y LSV
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+M+ + VTYN L+ A RA +++A + E M K G PN TY ++ AY +A
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
++AL ++ MKE G + YN + + ++E +K+ DMKS+G C P+ T
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG-CSPNRAT 458
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
+ +++ + G + EM CGFEP+ +L+ YG+ D K++ ++
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT 518
Query: 485 DLGIS 489
G +
Sbjct: 519 RAGFN 523
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 1/329 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V YN L++F + + A + EM + + +T++ LVA +A E
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M P+ ++I Y + G D AL L+ K +T ++A++ + G
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + + DMK G PN T+N +L G + ++ EM GF P+ T+
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ AY R DA +Y EM G + YN L + A G+ + +DMKS
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G +P +Y+ ++ Y+ G E + N + P+ + L +L+ K +
Sbjct: 556 G-FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 476 VVKIFNQLLDLGISPDDRFCDCLLYVATQ 504
+ F G PD + +L + T+
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 151/363 (41%), Gaps = 2/363 (0%)
Query: 129 VSEMLVK-GLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
V EM+ K G+ N +I E L Y ++ + YN L L
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+ K+ +M G PN T++T++A + F +M S EPD +
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
++I Y R G+ A +Y + ++AL+ G++ + +V SDM
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
K G KP +Y+ +L + + I + + P+W LL A + R
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+ + K+ G D V++N + + D+A I ++ G PD TY S
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG-LSPDLVTYNS 671
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
L++MY G+ +AE +L + + +P++++ +++ + + + V++ +++ + G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 488 ISP 490
I P
Sbjct: 732 IRP 734
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 37/250 (14%)
Query: 278 RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
++D +++ G Y + + + ++ Y +L+A R + A
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCR-ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
++E M + G SP TY +L + + R L V EM+ KG D+ + + C
Sbjct: 232 LFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM-------- 448
A G EA + FA++KS G +P TY +L+ ++ G TEA ++L EM
Sbjct: 292 AREGLLREAKEFFAELKSCG-YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPAD 350
Query: 449 -----------IRCGFE----------------PNILALTSLVHLYGKAKRADDVVKIFN 481
+R GF PN + T+++ YGKA + D+ +K+F
Sbjct: 351 SVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFY 410
Query: 482 QLLDLGISPD 491
+ + G P+
Sbjct: 411 SMKEAGCVPN 420
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 15/315 (4%)
Query: 189 IKDFGR------AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
I +GR A K++ EM + G + T++ L+ + M S
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK----WRVDTVAFSALIKMYGMSGNYD 298
+P + + M+ YA+ GN + +R K + W + A K ++G+
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
A ++ K G KP+MV +N++L R A+ I E + ++G SP+ TY +L+
Sbjct: 618 A----FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
Y R A + K +++ D V YN + G EA+++ ++M G
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG-I 732
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+P FTY + ++ Y+ MG E E ++ M + PN L +V Y +A + + +
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 479 IFNQLLDLGISPDDR 493
+++ DD+
Sbjct: 793 FVSKIKTFDPCFDDQ 807
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 161 LAFEYFKQKIKPAR----HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
L E + +IK + ++L + L F+ + +E+ F + G KP+++ F++
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFK-CRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
+++ + ++ +A E + PD S++ +Y R G A + + +
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ D V+++ +IK + G + + S+M G +P + TYN + + +
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+ E M KN PN T+ ++ YCRA +A+ ++K
Sbjct: 757 DVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y++ L+ + + ++ E++ + + + + P+ + TL+ C + F
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 623
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+PD + SM+ ++ R D A + + + + D V +++L+ MY G
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ ++ KP++V+YN ++ R ++A + EM + G P TY +
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
Y + V + M + +++ + M+ D G EAM + +K+ C
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPC 803
Query: 419 QPDN 422
D
Sbjct: 804 FDDQ 807
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 166/318 (52%), Gaps = 15/318 (4%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCS 225
+ +IKP +VV N + A F +M + GVK N++T+ TL+ AC S +
Sbjct: 434 EDEIKP--NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
V KA+ W+EKM C PD + ++I ++ A+ + ++ K + +D +A++
Sbjct: 492 V-EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
LI ++ N + + +DM+ G KP+ +TYN L+ G+ K + + E+M ++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADE 404
G P TY A++ AYC ++AL ++K+M K + + V+YN+L + + GN +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL---NEMIRCGFEPNILALT 461
A+ + +MK +P+ TY +L + C+ + T+ E LL +EM+ EPN + +
Sbjct: 671 ALSLKEEMKMKM-VRPNVETYNAL---FKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 462 SLVHLYGKAKRADDVVKI 479
L+ + +D++VK+
Sbjct: 727 ILME---RLSGSDELVKL 741
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 162/412 (39%), Gaps = 87/412 (21%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG--------VKPNLITFSTLVAC 220
KI+P VV + + + + A ++F++M RG +K + I F+TL+
Sbjct: 324 KIRP--DVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDG 379
Query: 221 ASTCSVPHKAVEWFEKMPSFE-CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A E +M E C P+ +I Y R G ++ A + R K ++ +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 280 DTVAFSALIKMYGMSGNYDACLSV--YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
+ V + ++ GM ++ ++V + DM+ G K N+VTY L++A A
Sbjct: 440 NVVTVNTIVG--GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE------------------ 379
YE+M++ G SP+ Y AL+ C+ R DA+ V +++KE
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 380 -----------------KGKDVDKVLYNML------------------------------ 392
+GK D + YN L
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 393 -----FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
D G DEA+K+F DM P+ Y LIN +S +G +A +L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
M PN+ +L + + + ++K+ +++++ P+ + L+
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 90/230 (39%), Gaps = 41/230 (17%)
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+N LL +GR + +M + P+ T L+ C++R ++AL V+++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 379 EKGKD------VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
K D D + +N L D G EA ++ MK C P+ TY LI+ Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTS------------------------------ 462
GK+ A+ +++ M +PN++ + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 463 -----LVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPR 507
L+H + + + ++L+ G SPD + L+ Q+ R
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 166/318 (52%), Gaps = 15/318 (4%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCS 225
+ +IKP +VV N + A F +M + GVK N++T+ TL+ AC S +
Sbjct: 434 EDEIKP--NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
V KA+ W+EKM C PD + ++I ++ A+ + ++ K + +D +A++
Sbjct: 492 V-EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
LI ++ N + + +DM+ G KP+ +TYN L+ G+ K + + E+M ++
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADE 404
G P TY A++ AYC ++AL ++K+M K + + V+YN+L + + GN +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL---NEMIRCGFEPNILALT 461
A+ + +MK +P+ TY +L + C+ + T+ E LL +EM+ EPN + +
Sbjct: 671 ALSLKEEMKMKM-VRPNVETYNAL---FKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 462 SLVHLYGKAKRADDVVKI 479
L+ + +D++VK+
Sbjct: 727 ILME---RLSGSDELVKL 741
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 170/432 (39%), Gaps = 51/432 (11%)
Query: 118 SLDSCNPTEQQVSEM--LVKGLGENVTEREAMIVLDNMVNP-------ETALLAFEYFKQ 168
+L SC +S M LV + E V R ++ L ++N + AL FE +
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDE-VKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRG 357
Query: 169 KIKPARHVV-----LYNVTLKLFREIKDFGRAEKLFDEM-LQRGVKPNLITFSTLVACAS 222
K +V+ +N + ++ AE+L M L+ PN +T++ L+
Sbjct: 358 KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYC 417
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
A E +M E +P+ +++ R ++MA+ + + E + + V
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
+ LI N + + Y M G P+ Y L+ + + +R DA + E++
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML---------- 392
+ GFS + Y L+ +C +E + +M+++GK D + YN L
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 393 -------------------------FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
D G DEA+K+F DM P+ Y
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
LIN +S +G +A +L EM PN+ +L + + + ++K+ +++++
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 488 ISPDDRFCDCLL 499
P+ + L+
Sbjct: 718 CEPNQITMEILM 729
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 90/230 (39%), Gaps = 41/230 (17%)
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+N LL +GR + +M + P+ T L+ C++R ++AL V+++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 379 EKGKD------VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
K D D + +N L D G EA ++ MK C P+ TY LI+ Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTS------------------------------ 462
GK+ A+ +++ M +PN++ + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 463 -----LVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPR 507
L+H + + + ++L+ G SPD + L+ Q+ R
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 5/333 (1%)
Query: 162 AFEYFKQKIK--PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + F +K P +V +N L ++K + L +M G++ +L TF+ ++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C C A+ KM EPD S++ + R V A+SL D+ ++
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D VA++A+I + + + +++ G +PN+VTY L+ + + R DA +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAH 398
+M+K +PN TY+ALL A+ + +A +++EM D D V Y+ L + +C H
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
DEA ++F M S G C D +Y +LIN + +V + L EM + G N +
Sbjct: 309 -DRIDEANQMFDLMVSKG-CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+L+ + +A D + F+Q+ GISPD
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 7/312 (2%)
Query: 149 VLDNMVNPETALLAFEYFKQ----KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
++D++ + AF++FK+ I+P +VV Y + + A +L +M++
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRP--NVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 205 RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
+ + PN+IT+S L+ +A E FE+M +PD +S+I +D
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A ++D ++ D V+++ LI + + + + ++ +M G N VTYN L+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
+A A+ + +M G SP+ TY LL C E AL ++++M+++ D+
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
D V Y + G +EA +F + G +PD TYT++++ G + E EAL
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 445 LNEMIRCGFEPN 456
+M + G N
Sbjct: 493 YTKMKQEGLMKN 504
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V YN + + K A F E+ ++G++PN++T++ LV S A
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M + P+ ++++ + + G V A L++ D V +S+LI +
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D ++ M G ++V+YN L+ +AKR D ++ EM + G N TY
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+Q + +A + A + +M G D YN+L G ++A+ IF DM+
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
+ D TYT++I GKV EA +L + G +P+I+ T+++
Sbjct: 430 -EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
R + DA ++ +MVK+ P+ + LL A + + + +S+ K+M+ G D
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 388 LYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
+N++ + C F A+ I M G +PD T SL+N + +V++A +L++
Sbjct: 122 TFNIVINCFCCCF-QVSLALSILGKMLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+M+ G++P+I+A +++ K KR +D F ++ GI P+
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M++ G +P+ ITF+TL+ + +AV ++M C+P+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
++ + G+ D+AL+L ++ + K D V F+ +I + D L+++ +M+
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN+VTY++L+ + R DA + +M++ +PN T+ AL+ A+ + +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A +Y +M ++ D D YN L + C H D+A ++F M S DC PD TY +L
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMH-DRLDKAKQMFEFMVSK-DCFPDVVTYNTL 406
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I + +V + L EM G + + T+L+ D+ K+F Q++ G+
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 489 SPD 491
PD
Sbjct: 467 PPD 469
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 36/332 (10%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L D M+QRG +PNL+T+ +V A+ KM + + E D + ++I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ +VD AL+L+ +T+ R + V +S+LI G + + SDM P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVK--------------NGFS------------ 348
N+VT+N L+ A + + +A+ +Y++M+K NGF
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 349 ---------PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
P+ TY L++ +C+++ ED +++EM +G D V Y L H
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G+ D A K+F M S G PD TY+ L++ GK+ +A + + M + + +I
Sbjct: 449 GDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
T+++ KA + DD +F L G+ P+
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 144/297 (48%), Gaps = 1/297 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF M++ P+++ F+ L++ + + EKM E +I
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + +AL+L + + V S+L+ Y +++ M +G +P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ +T+ L++ + +A +A + + MV+ G PN TY ++ C+ ++ AL++
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+M+ + D V++N + D + + D+A+ +F +M++ G +P+ TY+SLI+
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCS 307
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+ ++A LL++MI PN++ +L+ + K + + K+++ ++ I PD
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV++N + + + A LF EM +G++PN++T+S+L++C + A +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M + P+ ++I + + G A LYD D +++L+ + M
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D ++ M P++VTYN L+ ++KR D ++ EM G + TY
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+Q ++A V+K+M G D + Y++L D + G ++A+++F M+ S
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
+ + D + YT++I GKV + L + G +PN++ +++
Sbjct: 500 -EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 5/376 (1%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P +V +N L ++K F L ++M + + L T++ L+ C S
Sbjct: 78 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EP +S++ Y + A++L D+ +R DT+ F+ LI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ +++ M G +PN+VTY ++ + + A + +M
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
+ + ++ + C+ R +DAL+++KEM+ KG + V Y+ L +G +A ++
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+DM P+ T+ +LI+ + GK EAE L ++MI+ +P+I SLV+ +
Sbjct: 318 LSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 469 KAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVV 528
R D ++F ++ PD + L+ + R E G + +G V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 529 RYLTEE----HEGDGD 540
Y T H+GD D
Sbjct: 437 TYTTLIQGLFHDGDCD 452
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 5/325 (1%)
Query: 131 EMLVKGLGENVTEREAMI--VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFRE 188
EM KG+ NV ++I + + + L + ++KI P ++V +N + F +
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP--NLVTFNALIDAFVK 342
Query: 189 IKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNL 248
F AEKL+D+M++R + P++ T+++LV KA + FE M S +C PD
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
++I + + V+ L+ DTV ++ LI+ G+ D V+ M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
G P+++TY+ LL + + A +++ M K+ + Y +++ C+A +
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
D ++ + KG + V YN + EA + MK G P++ TY +L
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTL 581
Query: 429 INMYSCMGKVTEAEALLNEMIRCGF 453
I + G + L+ EM C F
Sbjct: 582 IRAHLRDGDKAASAELIREMRSCRF 606
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
+D A+ L+ + V F+ L+ +D +S+ M+ L + TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
L+ R + A + +M+K G+ P+ T ++LL YC + DA+++ +M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
D + + L A EA+ + M G CQP+ TY ++N G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
LLN+M E +++ +++ K + DD + +F ++ GI P+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 169/366 (46%), Gaps = 44/366 (12%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E + ++ P +V YN+ ++ F + A LFD+M +G PN++T++TL+
Sbjct: 195 EMLESQVSP--NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 224 CSVPHKAVEWFEKMPSFECEPD---DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD 280
+ M EP+ N+ + + R+ V L+ +R + +D
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR---RGYSLD 309
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM---GRAKRA----- 332
V ++ LIK Y GN+ L ++++M G P+++TY +L+++M G RA
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 333 ---------------------------RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
+A + EM NGFSP+ TY AL+ +C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
EDA++V ++MKEKG D V Y+ + + DEA+++ +M G +PD TY
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKPDTITY 488
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+SLI + + EA L EM+R G P+ T+L++ Y + +++ N++++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 486 LGISPD 491
G+ PD
Sbjct: 549 KGVLPD 554
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 37/317 (11%)
Query: 176 VVLYNVTL-KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
V+ YN L R ++ AE +F EML+ V PN+ T++ L+
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG-------------- 214
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+ +A GN+D+AL+L+D+ +T+ + V ++ LI Y
Sbjct: 215 -------------------FCFA--GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
D + M + G +PN+++YN ++ + R R ++ + EM + G+S + TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L++ YC+ AL ++ EM G + Y L GN + AM+ M+
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
G C P+ TYT+L++ +S G + EA +L EM GF P+++ +L++ + + +
Sbjct: 374 RGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 475 DVVKIFNQLLDLGISPD 491
D + + + + G+SPD
Sbjct: 433 DAIAVLEDMKEKGLSPD 449
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 9/322 (2%)
Query: 175 HVVLYNVTLK-LFREIKDFGRAEKL---FDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
+++ YNV + L RE GR +++ EM +RG + +T++TL+ H+A
Sbjct: 274 NLISYNVVINGLCRE----GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ +M P S+I+ + GN++ A+ D+ + + ++ L+
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ G + V +M G P++VTYN L+ + DA + E+M + G SP+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
+Y+ +L +CR+ ++AL V +EM EKG D + Y+ L EA ++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
+M G PD FTYT+LIN Y G + +A L NEM+ G P+++ + L++ K
Sbjct: 510 EMLRVG-LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 471 KRADDVVKIFNQLLDLGISPDD 492
R + ++ +L P D
Sbjct: 569 SRTREAKRLLLKLFYEESVPSD 590
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 18/339 (5%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E + + P+ V+ Y + + + RA + D+M RG+ PN T++TLV S
Sbjct: 335 EMLRHGLTPS--VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
++A +M P ++I + G ++ A+++ + K + D V+
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
+S ++ + S + D L V +M G KP+ +TY++L+ +R ++A +YEEM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+ G P+ TY AL+ AYC E AL ++ EM EKG D V Y++L +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYS--------------CM-GKVTEAEALLNEM 448
EA ++ + + P + TY +LI S CM G +TEA+ + M
Sbjct: 573 EAKRLLLKLFYE-ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 449 IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+ +P+ A ++H + +A ++ +++ G
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 2/239 (0%)
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG-NYDACLSVYSDMKVLGAKP 314
Y+R+ +D ALS+ A+ + ++++A++ S N +V+ +M P
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+ TYN L+ A A T++++M G PN TY L+ YC+ R +D +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+ M KG + + + YN++ + G E + +M G D TY +LI Y
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKGYCK 322
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
G +A + EM+R G P+++ TSL+H KA + ++ +Q+ G+ P++R
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 53/311 (17%)
Query: 157 ETALLAFEYFKQK-IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
E A+ E K+K + P VV Y+ L F D A ++ EM+++G+KP+ IT+S
Sbjct: 432 EDAIAVLEDMKEKGLSP--DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
+L+ +A + +E+M PD+ ++I Y G+++ AL L++ +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 276 KWRVDTVAFS-------------------------------------------------- 285
D V +S
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
+LIK + M G V+ M KP+ YN +++ RA R A T+Y+EMVK+
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
GF + T AL++A + + SV + + + +L ++ GN D
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVV 729
Query: 406 MKIFADMKSSG 416
+ + A+M G
Sbjct: 730 LDVLAEMAKDG 740
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 12/400 (3%)
Query: 99 QLLKKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMIVLDNMVN 155
Q+++ Y S L L N + V+ M+VKG ++ IV++ +
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG--IVVNGLCK 233
Query: 156 PETALLAFEYFKQ----KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNL 211
LA K+ KI+P VV+YN + K+ A LF EM +G++PN+
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPG--VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 212 ITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR 271
+T+++L+ C A M + P+ +++I + + G + A LYD
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 272 AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
D +S+LI + M D ++ M PN+VTYN L+ +AKR
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
+ ++ EM + G N TY L+ + +AR ++A V+K+M G D + Y++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 392 LFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRC 451
L D + G + A+ +F ++ S +PD +TY +I GKV + L +
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 452 GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G +PN++ T+++ + + ++ +F ++ + G PD
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 149/297 (50%), Gaps = 1/297 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF +M++ P+++ FS L++ + + + E+M + + + +I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + +AL++ + + D V ++L+ + +S+ M +G +P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ T+N L++ + R RA +A + + MV G P+ TY ++ C+ + ALS+
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
K+M++ + V+YN + D ++ N ++A+ +F +M + G +P+ TY SLI
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCN 303
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+ ++A LL++MI PN++ ++L+ + K + + K++++++ I PD
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 1/316 (0%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P +V ++ L ++ F L ++M G+ NL T+S L+ C S
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EPD S++ + + A+SL + ++ D+ F+ LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+++ M V G +P++VTY ++ + + A ++ ++M +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P Y ++ A C + DAL+++ EM KG + V YN L ++G +A ++
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+DM P+ T+++LI+ + GK+ EAE L +EMI+ +P+I +SL++ +
Sbjct: 314 LSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 469 KAKRADDVVKIFNQLL 484
R D+ +F ++
Sbjct: 373 MHDRLDEAKHMFELMI 388
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 158/341 (46%), Gaps = 8/341 (2%)
Query: 130 SEMLVKGLGENVTEREAMI-VLDNMVN-PETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
+EM KG+ NV ++I L N + + L + ++KI P +VV ++ + F
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP--NVVTFSALIDAFV 337
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+ AEKL+DEM++R + P++ T+S+L+ +A FE M S +C P+
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
++I + + VD + L+ +TV ++ LI + + D V+ M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
G P+++TY+ LL + + A ++E + ++ P+ TY +++ C+A
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
ED ++ + KG + V Y + G +EA +F +MK G PD+ TY +
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNT 576
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGF---EPNILALTSLVH 465
LI + G + L+ EM C F I +T+++H
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLH 617
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
+D A++L+ + V FS L+ +D +S+ M+ LG N+ TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
L+ R + A + +M+K G+ P+ T +LL +C DA+S+ +M E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
D +N L A EA+ + M G CQPD TY ++N G + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+LL +M + EP ++ +++ K +D + +F ++ + GI P+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ Y + ++ G A KL DEM RG P+++T++ LV +A+++
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
MPS C+P+ ++ G A L + + V F+ LI G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + M G +PN ++YN LL+ + K+ A E MV G P+ TY
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+L A C+ EDA+ + ++ KG + YN + D A G +A+K+ +M++
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
D +PD TY+SL+ S GKV EA +E R G PN + S++ K+++ D
Sbjct: 479 -DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 476 VVKIFNQLLDLGISPDD 492
+ +++ G P++
Sbjct: 538 AIDFLVFMINRGCKPNE 554
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 146/316 (46%), Gaps = 4/316 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YNV + + + + A + D M V P+++T++T++ +A+E +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M +C PD +I R V A+ L D + D V ++ L+ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D + +DM G +PN++T+N +L +M R DA+ + +M++ GFSP+ T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ CR A+ + ++M + G + + YN L D A++ M S
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G C PD TY +++ GKV +A +LN++ G P ++ +++ KA +
Sbjct: 409 G-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 476 VVKIFNQLLDLGISPD 491
+K+ +++ + PD
Sbjct: 468 AIKLLDEMRAKDLKPD 483
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+ ++ E M PD ++I + R+G A + + + D + ++ +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I Y +G + LSV M V P++VTYN +L ++ + + + A + + M++
Sbjct: 179 ISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P+ TY L++A CR A+ + EM+++G D V YN+L + G DEA+K
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
DM SSG CQP+ T+ ++ G+ +AE LL +M+R GF P+++ L++
Sbjct: 296 FLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 468 GKAKRADDVVKIFNQLLDLGISPD 491
+ + I ++ G P+
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPN 378
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+V+ +N+ L+ + AEKL +ML++G P+++TF+ L+ + +A++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
EKMP C+P+ +++ + + +D A+ +R + D V ++ ++
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G + + + + + G P ++TYN ++ + +A + A + +EM P+ TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN-MLFDMCAHFGNADEAMKIFADMK 413
++L+ R ++A+ + E + G + V +N ++ +C D A+ M
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR-QTDRAIDFLVFMI 546
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
+ G C+P+ +YT LI + G EA LLNE+ G
Sbjct: 547 NRG-CKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
V NN L M R + E MV +G P+ L++ +CR + A + +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
++ G D + YN++ G + A+ + M S PD TY +++ G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSG 218
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
K+ +A +L+ M++ P+++ T L+ + +K+ +++ D G +PD
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 4/282 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +M++ G +P+++TF++L+ + +A+ +M +PD + ++I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ G+V+ ALSL+D+ + R D V +++L+ SG + S+ M KP
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+++T+N L+ A + + DA+ +Y EM++ +PN TY +L+ +C C ++A ++
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
M+ KG D V Y L + D+AMKIF +M G + TYT+LI +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG-LTGNTITYTTLIQGFGQ 364
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRA 473
+GK A+ + + M+ G PNI L+H GK K+A
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 158/330 (47%), Gaps = 1/330 (0%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
+P ++ + L + ++K F L D + GV +L T + L+ C S P+ A
Sbjct: 67 RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLA 126
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ KM EPD S+I + ++ A+S+ ++ + D V ++ +I
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+G+ + LS++ M+ G +P++V Y +L+ + + R RDA ++ M K P+
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
T+ AL+ A+ + DA +Y EM + Y L + G DEA ++F
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
M++ G C PD YTSLIN + KV +A + EM + G N + T+L+ +G+
Sbjct: 307 LMETKG-CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 471 KRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+ + ++F+ ++ G+ P+ R + LL+
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 147/328 (44%), Gaps = 45/328 (13%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA--CASTC 224
K+KIKP V+ +N + F + F AE+L++EM++ + PN+ T+++L+ C C
Sbjct: 240 KRKIKP--DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 225 SVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
+A + F M + C PD S+I + + VD A+ ++ + +T+ +
Sbjct: 298 V--DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+ LI+ +G G + V+S M G PN+ TYN LL+ + + + A I+E+M K
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 345 ---NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
+G +PN TY LL C E AL V+++M+++ D+ +
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT------------- 462
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
+ G C+ GKV A L + G +PN++ T
Sbjct: 463 --------YTIIIQGMCKA---------------GKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGIS 489
+++ + + +F ++ + G+S
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
AL L+ + + F+ L+ + +D +++ ++++G ++ T N L+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
++ + A + +M+K GF P+ T+ +L+ +C E+A+S+ +M E G
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
D V+Y + D G+ + A+ +F M++ G +PD YTSL+N G+ +A++L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYG-IRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L M + +P+++ +L+ + K + D +++N+++ + I+P+
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 154/361 (42%), Gaps = 16/361 (4%)
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDF 192
L+ G EAM +++ MV + IKP VV+Y + +
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMV------------EMGIKP--DVVMYTTIIDSLCKNGHV 193
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
A LFD+M G++P+++ +++LV A M + +PD ++
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I + + G A LY+ + +++LI + M G D ++ M+ G
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
P++V Y +L+ + K+ DA I+ EM + G + N TY L+Q + + A
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM--KSSGDCQPDNFTYTSLIN 430
V+ M +G + YN+L + G +A+ IF DM + P+ +TY L++
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
GK+ +A + +M + + I+ T ++ KA + + V +F L G+ P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 491 D 491
+
Sbjct: 494 N 494
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
++A++ F M P ++ V A++ D+ ++L D + D + L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
+ + S S M LG +P++VT+ +L+ R +A ++ +MV+ G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P+ Y ++ + C+ ALS++ +M+ G D V+Y L + + G +A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+ M + +PD T+ +LI+ + GK +AE L NEMIR PNI TSL++ +
Sbjct: 234 LLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 468 GKAKRADDVVKIFNQLLDLGISPD--------DRFCDC 497
D+ ++F + G PD + FC C
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 5/309 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +LFDEM ++G KPN TF LV + K +E M SF P+ + +++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV---LG 311
+ R G D + + ++ + E D V F++ I G ++SDM++ LG
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 312 -AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
+PN +TYN +L + DAKT++E + +N + +Y LQ R +A
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+V K+M +KG YN+L D G +A I MK +G C PD TY L++
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLH 404
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
Y +GKV A++LL EM+R PN L+H K R + ++ ++ + G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 491 DDRFCDCLL 499
D C+ ++
Sbjct: 465 DTVTCNIIV 473
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 132/313 (42%), Gaps = 13/313 (4%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + ++ A+ + M + GV P+ +T+ L+ + A ++M
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
C P+ +++ ++G + A L + + + +DTV + ++ SG D
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ + M+V G+ A+G + + + +++N P+ TY+ LL
Sbjct: 484 KAIEIVKGMRVHGSA-----------ALGNLGNSY-IGLVDDSLIENNCLPDLITYSTLL 531
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
C+A +A +++ EM + D V YN+ G A ++ DM+ G C
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG-C 590
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
TY SLI ++ E L++EM G PNI + + + ++ +D
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 479 IFNQLLDLGISPD 491
+ ++++ I+P+
Sbjct: 651 LLDEMMQKNIAPN 663
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 63/369 (17%)
Query: 177 VLYNVTLKLF-REIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+YN + F RE ++ +EK+ ++M + G+ P+++TF++ ++ A F
Sbjct: 218 VIYNTIVSSFCREGRN-DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 236 KMPSFEC----EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
M E P+ M+ + ++G ++ A +L++ + +++ ++
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G + +V M G P++ +YN L+ + + DAKTI M +NG P+
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 352 PTYAALLQAYC----------------RARCSEDALS-------------------VYKE 376
TY LL YC R C +A + + ++
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG-------------------- 416
M EKG +D V N++ D G D+A++I M+ G
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 417 --DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
+C PD TY++L+N G+ EA+ L EM+ +P+ +A +H + K +
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 475 DVVKIFNQL 483
++ +
Sbjct: 577 SAFRVLKDM 585
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 58/354 (16%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
KP+ V LYN+ L+ + + L+ +M+ G+ P TF+ L+ S A
Sbjct: 109 KPS--VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
E F++MP C+P++ F L++
Sbjct: 167 RELFDEMPEKGCKPNE-----------------------------------FTFGILVRG 191
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
Y +G D L + + M+ G PN V YN ++ + R R D++ + E+M + G P+
Sbjct: 192 YCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL---------YNMLFDMCAHFGN 401
T+ + + A C+ DA ++ +M ++D+ L YN++ G
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDM-----ELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 402 ADEAMKIFADMKSSGDC---QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
++A +F ++ + D Q N L+ GK EAE +L +M G P+I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRH----GKFIEAETVLKQMTDKGIGPSIY 362
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
+ L+ K D I + G+ PD CLL+ + + + K
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 25/335 (7%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N+ L ++ AE+L +M ++G + +T + +V KA+E + M
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 240 F-----------------------ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
C PD ++++ + G A +L+ EK
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ D+VA++ I + G + V DM+ G ++ TYN+L+ +G + +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +EM + G SPN TY +Q C EDA ++ EM +K + + L +
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
+ D A ++F S C Y+ + N G++ +A LL ++ GFE
Sbjct: 675 CKVPDFDMAQEVFETAVSI--CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELG 732
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
LV K + I ++++D G D
Sbjct: 733 TFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 125/287 (43%), Gaps = 2/287 (0%)
Query: 200 DEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARI 259
D +++ P+LIT+STL+ +A F +M + +PD I+ + +
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 260 GNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY 319
G + A + + + +++LI G+ + +MK G PN+ TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 320 NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
N + + ++ DA + +EM++ +PN ++ L++A+C+ + A V+ E
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAV 691
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVT 439
+ LY+++F+ G +A ++ + G + F Y L+ ++
Sbjct: 692 SICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG-FELGTFLYKDLVESLCKKDELE 750
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
A +L++MI G+ + AL ++ GK + ++++++
Sbjct: 751 VASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 5/375 (1%)
Query: 147 MIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG 206
+ L M + AL FE K+ P ++ YN+ + + A +L D M + G
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
+ PN+ T + +V +A FE+M C PD+ S+I ++G VD A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
+Y++ R +++ +++LIK + G + +Y DM P++ N + M
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
+A + ++EE+ F P+ +Y+ L+ +A + + ++ MKE+G +D
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
YN++ D G ++A ++ +MK+ G +P TY S+I+ + + ++ EA L
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIP 506
E E N++ +SL+ +GK R D+ I +L+ G++P+ + LL +
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL--DALVK 704
Query: 507 RQELGKITACIEKAK 521
+E+ + C + K
Sbjct: 705 AEEINEALVCFQSMK 719
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 139/289 (48%), Gaps = 3/289 (1%)
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALS 267
+P ++TL+ S + + F++M EP +L ++I +A+ G VD ALS
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
L D K+ D V ++ I +G G D + +++ G KP+ VTY +++ +
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
+A R +A ++E + KN P Y ++ Y A ++A S+ + + KG +
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
YN + G DEA+K+F +MK D P+ TY LI+M GK+ A L +
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD-RFC 495
M + G PN+ + +V K+++ D+ +F ++ +PD+ FC
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 1/257 (0%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
+LF M ++G + ++ ++ C +KA + E+M + EP S+I
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
A+I +D A L++ AK+++ ++ V +S+LI +G G D + ++ G PN+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
T+N+LL A+ +A+ +A ++ M + +PN TY L+ C+ R A ++E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M+++G + Y + A GN EA +F K++G PD+ Y ++I S
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEGLSNGN 811
Query: 437 KVTEAEALLNEMIRCGF 453
+ +A +L E R G
Sbjct: 812 RAMDAFSLFEETRRRGL 828
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 138/307 (44%), Gaps = 3/307 (0%)
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
GRA +F+E+ R P+ ++S L+ ++ E F M C D +
Sbjct: 536 GRA--MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I + + G V+ A L + KT+ + V + ++I D ++ + K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+ N+V Y++L+ G+ R +A I EE+++ G +PN T+ +LL A +A +AL
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
++ MKE ++V Y +L + ++A + +M+ G +P +YT++I+
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGL 772
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+ G + EA AL + G P+ +++ RA D +F + G+ +
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 493 RFCDCLL 499
+ C LL
Sbjct: 833 KTCVVLL 839
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 2/261 (0%)
Query: 123 NPTEQQVSEMLVKGLGENVTEREAMI-VLDNMVNPETALLAFEYFKQKIKPARHVVLYNV 181
N Q + EM KG V ++I L + + A + FE K K + +VV+Y+
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSS 662
Query: 182 TLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
+ F ++ A + +E++Q+G+ PNL T+++L+ ++A+ F+ M +
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
C P+ +I ++ + A + + + + T++++ +I +GN
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
+++ K G P+ YN ++ + RA DA +++EE + G + T LL
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 362 CRARCSEDALSVYKEMKEKGK 382
+ C E A V ++E GK
Sbjct: 843 HKNDCLEQAAIVGAVLRETGK 863
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 109/238 (45%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + F + +A +L +EM +G +P ++T+ +++ + +A FE+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
S E + + +S+I + ++G +D A + + + + +++L+ + +
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
L + MK L PN VTY L+ + + ++ A ++EM K G P+ +Y ++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+A +A +++ K G D YN + + ++ A +A +F + + G
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 14/279 (5%)
Query: 228 HKAVE---WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW--RVDTV 282
++A+E W+E+ P+ S++ V AR N D + + V+T
Sbjct: 79 NRAIEYFRWYERRTELPHCPES--YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTC 136
Query: 283 AFSAL--IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
L +K + YD V M+ +P Y L+ A + T+++
Sbjct: 137 IEMVLGCVKANKLREGYD----VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG 400
+M + G+ P + L++ + + + ALS+ EMK D D VLYN+ D G
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
D A K F +++++G +PD TYTS+I + ++ EA + + + P A
Sbjct: 253 KVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+++ YG A + D+ + + G P +C+L
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 9/331 (2%)
Query: 130 SEMLVKGLGENVTEREAMI--VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
+EM +KG+ +V ++I + ++ + A + E + I P VV ++ + +F
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP--DVVTFSALIDVFV 326
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA--CASTCSVPHKAVEWFEKMPSFECEPD 245
+ A++L++EM+ RG+ P+ IT+++L+ C C H+A + F+ M S CEPD
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC--LHEANQMFDLMVSKGCEPD 384
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS 305
+ +I Y + VD + L+ ++ +T+ ++ L+ + SG +A ++
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 306 DMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
+M G P++VTY LL + A I+E+M K+ + Y ++ C A
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
+DA S++ + +KG D V YN++ G+ EA +F MK G C PD+FTY
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-CTPDDFTY 563
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
LI + + + L+ EM CGF +
Sbjct: 564 NILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L D M++ +P+L+T STL+ +A+ ++M + +PD+ ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ GN +AL L+ + + + V +S +I G++D LS++++M++ G K
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++VTY++L+ + + D + EM+ P+ T++AL+ + + +A +Y
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
EM +G D + YN L D EA ++F M S G C+PD TY+ LIN Y
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCK 397
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+V + L E+ G PN + +LV + ++ + + ++F +++ G+ P
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 151/314 (48%), Gaps = 11/314 (3%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF+ M+Q P I F+ L + + + + + M E D MI
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y R + A S+ RA + DT+ FS L+ + + G +++ M + +P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++VT + L+ + R +A + + MV+ GF P+ TY +L C++ S AL ++
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
++M+E+ V Y+++ D G+ D+A+ +F +M+ G + D TY+SLI
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGGLCN 292
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--- 491
GK + +L EMI P+++ ++L+ ++ K + + +++N+++ GI+PD
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 492 -----DRFC--DCL 498
D FC +CL
Sbjct: 353 YNSLIDGFCKENCL 366
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 147/308 (47%), Gaps = 8/308 (2%)
Query: 184 KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECE 243
KL GRA KL G +P+ ITFSTLV +AV ++M +
Sbjct: 120 KLLFAFSVLGRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
PD +++I G V AL L DR ++ D V + ++ SGN L +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ M+ K ++V Y+ ++ ++ + DA +++ EM G + TY++L+ C
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
+D + +EM + D V ++ L D+ G EA +++ +M + G PD
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG-IAPDTI 351
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
TY SLI+ + + EA + + M+ G EP+I+ + L++ Y KAKR DD +++F ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 484 LDLGISPD 491
G+ P+
Sbjct: 412 SSKGLIPN 419
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 159/348 (45%), Gaps = 7/348 (2%)
Query: 149 VLDNMVNPETALLAFEYFKQ----KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
VL+ + + LA + F++ IK + VV Y++ + + F A LF+EM
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKAS--VVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 205 RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
+G+K +++T+S+L+ + +M PD +++I V+ + G +
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A LY+ T DT+ +++LI + ++ M G +P++VTY+ L+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
+ +AKR D ++ E+ G PN TY L+ +C++ A +++EM +G
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
V Y +L D G ++A++IF M+ S Y +I+ KV +A +L
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDAWSL 512
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+ G +P+++ ++ K + +F ++ + G +PDD
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 151/326 (46%), Gaps = 3/326 (0%)
Query: 165 YFKQKIKPARH--VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
+FK I V YN+ + + D A LF+EM RG+ P+ +T+++++
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
V +FE+M CEPD ++I + + G + + L Y K + + V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
++S L+ + G + Y DM+ +G PN TY +L+ A + DA + EM
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
++ G N TY AL+ C A ++A ++ +M G + YN L N
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
D A+++ ++K G +PD Y + I + K+ A+ ++NEM CG + N L T+
Sbjct: 489 DRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGI 488
L+ Y K+ + + + +++ +L I
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDI 573
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 36/341 (10%)
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
P F L + + +A++ F KM F P +++ +A++G D
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 269 YDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+ R ++ +I G+ +A ++ +MK G P+ VTYN+++ G+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
R D +EEM P+ TY AL+ +C+ L Y+EMK G + V
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 389 YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
Y+ L D G +A+K + DM+ G P+ +TYTSLI+ +G +++A L NEM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVG-LVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 449 IRCGFE-----------------------------------PNILALTSLVHLYGKAKRA 473
++ G E PN+ + +L+H + KAK
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 474 DDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKIT 514
D +++ N+L GI PD ++ + + E K+
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 2/317 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YN + F + + + EM G+KPN++++STLV + +A++++
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M P++ S+I +IGN+ A L + + V ++ALI +
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
++ M G PN+ +YN L++ +AK A + E+ G P+ Y
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+ C E A V EMKE G + ++Y L D GN E + + +MK
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR-CGFEPNILALTSLVHLYGKAKRAD 474
D + T+ LI+ V++A N + G + N T+++ K + +
Sbjct: 572 -DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 475 DVVKIFNQLLDLGISPD 491
+F Q++ G+ PD
Sbjct: 631 AATTLFEQMVQKGLVPD 647
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
C P + ++ V +G ++ A+ + + K + T + + L+ + G D
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
+ DM GA+P + TYN ++ M + A+ ++EEM G P+ TY +++ +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
+ +D + ++EMK+ + D + YN L + FG ++ + +MK +G +P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG-LKPN 366
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFN 481
+Y++L++ + G + +A +M R G PN TSL+ K D ++ N
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 482 QLLDLGI 488
++L +G+
Sbjct: 427 EMLQVGV 433
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 142/311 (45%), Gaps = 2/311 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV Y + + + AE+LF +M GV PNL +++ L+ +A+E
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
++ +PD L + I+ + ++ A + + K + +++ ++ L+ Y S
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-GFSPNWPT 353
GN L + +MK L + +VT+ L+ + + K A + + + G N
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
+ A++ C+ E A +++++M +KG D+ Y L D GN EA+ + M
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
G + D YTSL+ S ++ +A + L EMI G P+ + S++ + +
Sbjct: 676 EIG-MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734
Query: 474 DDVVKIFNQLL 484
D+ V++ + L+
Sbjct: 735 DEAVELQSYLM 745
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 162/351 (46%), Gaps = 2/351 (0%)
Query: 150 LDNMVNPETALLAFEYFKQKIKPAR-HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK 208
L + AL F ++K R VV + + L+ + +F+ M+ G+K
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
PN+++++ L+ + + A+ + PD ++ Y R A +
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 269 YDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+ + E+ + + V ++ALI YG +G + ++ M+ G KPN+V+ LL A R
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
+K+ + T+ G + N Y + + +Y A E A+++Y+ M++K D V
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 389 YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
+ +L EA+ +M+ Y+S++ YS G+VTEAE++ N+M
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 449 IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
G EP+++A TS++H Y +++ ++F ++ GI PD C L+
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 17/365 (4%)
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
P LI + C C +W + ++ C +D + MI ++AR VD A L
Sbjct: 111 PVLIRELSRRGCIELCV---NVFKWMKIQKNY-CARND-IYNMMIRLHARHNWVDQARGL 165
Query: 269 YDRAKTEKW--RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
+ + +KW + D + ALI +G +G + +++ DM P+ TYNNL+ A
Sbjct: 166 F--FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
G + R+A + ++M NG P+ T+ +L AY R ALS ++ MK D
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSS-GDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+N++ + G + +A+ +F M+ +C+PD T+TS++++YS G++ A+
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL--YVAT 503
M+ G +PNI++ +L+ Y + + + + GI PD CLL Y +
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 504 QIPRQELGKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEALELFNSIDDDVKK----S 559
+ P + ++ + K + K V + G F EA+E+F ++ D K S
Sbjct: 404 RQPGKA-KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 560 LCNCL 564
+C L
Sbjct: 463 VCTLL 467
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 171/373 (45%), Gaps = 18/373 (4%)
Query: 121 SCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYN 180
SC P + + + L+ G R AM ++D+M+ + I P+R YN
Sbjct: 173 SCKP-DAETYDALINAHGRAGQWRWAMNLMDDML------------RAAIAPSRST--YN 217
Query: 181 VTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
+ ++ A ++ +M GV P+L+T + +++ + KA+ +FE M
Sbjct: 218 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYD--RAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ PD +IY +++G AL L++ R K + R D V F++++ +Y + G +
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
C +V+ M G KPN+V+YN L+ A + A ++ ++ +NG P+ +Y LL
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+Y R+R A V+ M+++ + + V YN L D G EA++IF M+ G
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-I 456
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+P+ + +L+ S K + +L+ G N A S + Y A + +
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 479 IFNQLLDLGISPD 491
++ + + D
Sbjct: 517 LYQSMRKKKVKAD 529
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 5/338 (1%)
Query: 157 ETALLAFEYFK-QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
E + F++ K QK AR+ + YN+ ++L +A LF EM + KP+ T+
Sbjct: 124 ELCVNVFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYD 182
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L+ A+ + M P + ++I GN AL + +
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D V + ++ Y Y LS + MK +P+ T+N ++Y + + ++ A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 336 KTIYEEMVKNGFS--PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
++ M + P+ T+ +++ Y E+ +V++ M +G + V YN L
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
A G + A+ + D+K +G PD +YT L+N Y + +A+ + M +
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+PN++ +L+ YG + V+IF Q+ GI P+
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 145/367 (39%), Gaps = 46/367 (12%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
K++ KP +VV YN + + A ++F +M Q G+KPN+++ TL+A CS
Sbjct: 418 KERRKP--NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA---ACSR 472
Query: 227 PHKAVEWFEKMPSFECEPDDNLSA----SMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
K V + + S NL+ S I Y ++ A++LY + +K + D+V
Sbjct: 473 SKKKVN-VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 283 AFSALIK-----------------------------------MYGMSGNYDACLSVYSDM 307
F+ LI Y G S+++ M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
K+ G +P+++ Y ++L+A +++ A ++ EM NG P+ +AL++A+ +
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+ + M+EK ++ +F C A+ + M T
Sbjct: 652 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQ 710
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+++++ GKV L ++I G N+ L+ +++ + G
Sbjct: 711 MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAG 770
Query: 488 ISPDDRF 494
I P ++
Sbjct: 771 IQPSNQM 777
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M++ G +P+ ITF+TL+ + +AV ++M C+P+
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
++ + G++D+A +L ++ + K D V F+ +I + D L+++ +M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN+VTY++L+ + R DA + +M++ +PN T+ AL+ A+ + +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A ++ +M ++ D D YN L + C H D+A ++F M S DC PD TY +L
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMVSK-DCFPDLDTYNTL 331
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I + +V + L EM G + + T+L+ D+ K+F Q++ G+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 489 SPD 491
PD
Sbjct: 392 PPD 394
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 166/376 (44%), Gaps = 5/376 (1%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P + +N L ++K F L ++M + G+ NL T++ L+ C S
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EP +S++ Y + A++L D+ +R DT+ F+ LI
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ +++ M G +PN+VTY ++ + + A + +M
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
+ + ++ + C+ R +DAL+++KEM+ KG + V Y+ L +G +A ++
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+DM P+ T+ +LI+ + GK EAE L ++MI+ +P+I SL++ +
Sbjct: 243 LSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 469 KAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVV 528
R D ++F ++ PD + L+ + R E G + +G V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 529 RYLTEE----HEGDGD 540
Y T H+GD D
Sbjct: 362 TYTTLIQGLFHDGDCD 377
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 154/339 (45%), Gaps = 7/339 (2%)
Query: 129 VSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPAR---HVVLYNVTLKL 185
V M+ +G N+ +V++ + LAF K++ A+ VV++N +
Sbjct: 138 VDRMVQRGCQPNLVTYG--VVVNGLCKRGDIDLAFNLL-NKMEAAKIEADVVIFNTIIDS 194
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPD 245
+ + A LF EM +G++PN++T+S+L++C + A + M + P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS 305
++I + + G A L+D D +++LI + M D ++
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 306 DMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
M P++ TYN L+ ++KR D ++ EM G + TY L+Q
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
++A V+K+M G D + Y++L D + G ++A+++F M+ S + + D + Y
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIY 433
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
T++I GKV + L + G +PN++ +++
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 5/325 (1%)
Query: 131 EMLVKGLGENVTEREAMI--VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFRE 188
EM KG+ NV ++I + + + L + ++KI P ++V +N + F +
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP--NLVTFNALIDAFVK 267
Query: 189 IKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNL 248
F AEKL D+M++R + P++ T+++L+ KA + FE M S +C PD +
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
++I + + V+ L+ DTV ++ LI+ G+ D V+ M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
G P+++TY+ LL + + A +++ M K+ + Y +++ C+A +
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
D ++ + KG + V YN + EA + MK G PD+ TY +L
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTL 506
Query: 429 INMYSCMGKVTEAEALLNEMIRCGF 453
I + G + L+ EM C F
Sbjct: 507 IRAHLRDGDKAASAELIREMRSCRF 531
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 162/351 (46%), Gaps = 2/351 (0%)
Query: 150 LDNMVNPETALLAFEYFKQKIKPAR-HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK 208
L + AL F ++K R VV + + L+ + +F+ M+ G+K
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
PN+++++ L+ + + A+ + PD ++ Y R A +
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 269 YDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+ + E+ + + V ++ALI YG +G + ++ M+ G KPN+V+ LL A R
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
+K+ + T+ G + N Y + + +Y A E A+++Y+ M++K D V
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 389 YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
+ +L EA+ +M+ Y+S++ YS G+VTEAE++ N+M
Sbjct: 401 FTILISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 449 IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
G EP+++A TS++H Y +++ ++F ++ GI PD C L+
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 155/322 (48%), Gaps = 12/322 (3%)
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKW--RVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
MI ++AR VD A L+ + +KW + D + ALI +G +G + +++ DM
Sbjct: 17 MIRLHARHNWVDQARGLF--FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
P+ TYNNL+ A G + R+A + ++M NG P+ T+ +L AY R
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS-GDCQPDNFTYTSL 428
ALS ++ MK D +N++ + G + +A+ +F M+ +C+PD T+TS+
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
+++YS G++ A+ M+ G +PNI++ +L+ Y + + + + GI
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 489 SPDDRFCDCLL--YVATQIPRQELGKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEAL 546
PD CLL Y ++ P + ++ + K + K V + G F EA+
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKA-KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 547 ELFNSIDDDVKK----SLCNCL 564
E+F ++ D K S+C L
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLL 335
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 171/373 (45%), Gaps = 18/373 (4%)
Query: 121 SCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYN 180
SC P + + + L+ G R AM ++D+M+ + I P+R YN
Sbjct: 41 SCKP-DAETYDALINAHGRAGQWRWAMNLMDDML------------RAAIAPSRST--YN 85
Query: 181 VTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
+ ++ A ++ +M GV P+L+T + +++ + KA+ +FE M
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYD--RAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ PD +IY +++G AL L++ R K + R D V F++++ +Y + G +
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
C +V+ M G KPN+V+YN L+ A + A ++ ++ +NG P+ +Y LL
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+Y R+R A V+ M+++ + + V YN L D G EA++IF M+ G
Sbjct: 266 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-I 324
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+P+ + +L+ S K + +L+ G N A S + Y A + +
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
Query: 479 IFNQLLDLGISPD 491
++ + + D
Sbjct: 385 LYQSMRKKKVKAD 397
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 3/316 (0%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+YN+ ++L +A LF EM + KP+ T+ L+ A+ + M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
P + ++I GN AL + + D V + ++ Y Y
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS--PNWPTYA 355
LS + MK +P+ T+N ++Y + + ++ A ++ M + P+ T+
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+++ Y E+ +V++ M +G + V YN L A G + A+ + D+K +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD +YT L+N Y + +A+ + M + +PN++ +L+ YG +
Sbjct: 253 GII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 476 VVKIFNQLLDLGISPD 491
V+IF Q+ GI P+
Sbjct: 312 AVEIFRQMEQDGIKPN 327
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 145/367 (39%), Gaps = 46/367 (12%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
K++ KP +VV YN + + A ++F +M Q G+KPN+++ TL+A CS
Sbjct: 286 KERRKP--NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA---ACSR 340
Query: 227 PHKAVEWFEKMPSFECEPDDNLSA----SMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
K V + + S NL+ S I Y ++ A++LY + +K + D+V
Sbjct: 341 SKKKVN-VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 283 AFSALIK-----------------------------------MYGMSGNYDACLSVYSDM 307
F+ LI Y G S+++ M
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
K+ G +P+++ Y ++L+A +++ A ++ EM NG P+ +AL++A+ +
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+ + M+EK ++ +F C A+ + M T
Sbjct: 520 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQ 578
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+++++ GKV L ++I G N+ L+ +++ + G
Sbjct: 579 MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAG 638
Query: 488 ISPDDRF 494
I P ++
Sbjct: 639 IQPSNQM 645
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 164/354 (46%), Gaps = 5/354 (1%)
Query: 149 VLDNM--VNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG 206
+LD M +NP + F +V ++N+ + F + + A+K+FDE+ +R
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
++P +++F+TL+ + +M PD +++I + +D A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
L+D + V F+ LI + +G D Y M G +P++V YN L+
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
+ A+ I + M++ G P+ TY L+ +CR E AL + KEM + G ++D+
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 387 VLYNMLF-DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
V ++ L MC G +A + +M +G +PD+ TYT +++ + G LL
Sbjct: 451 VGFSALVCGMCKE-GRVIDAERALREMLRAG-IKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
EM G P+++ L++ K + + + + +L++G+ PDD + LL
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 153/328 (46%), Gaps = 6/328 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E K+ ++P VV +N + + ++ + +L +M + +P++ T+S L+
Sbjct: 265 EITKRSLQPT--VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+ A F++M P+D + ++I+ ++R G +D+ Y + ++ + D V
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ L+ + +G+ A ++ M G +P+ +TY L+ R A I +EM
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+NG + ++AL+ C+ DA +EM G D V Y M+ D G+A
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
K+ +M+S G P TY L+N +G++ A+ LL+ M+ G P+ + +L
Sbjct: 503 TGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPD 491
L G + A+ K + Q ++GI D
Sbjct: 562 --LEGHHRHANS-SKRYIQKPEIGIVAD 586
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 96/244 (39%), Gaps = 36/244 (14%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
L +++ Y +G + A+ + ++ ++ V L+ Y ++
Sbjct: 172 LVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI 231
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
G N+ +N L+ + DA+ +++E+ K P ++ L+ YC+
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV--- 288
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
GN DE ++ M+ S +PD FTY++
Sbjct: 289 --------------------------------GNLDEGFRLKHQMEKS-RTRPDVFTYSA 315
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
LIN K+ A L +EM + G PN + T+L+H + + D + + + ++L G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 488 ISPD 491
+ PD
Sbjct: 376 LQPD 379
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
Y E+ + G ++ ++N+L + GN +A K+F ++ + QP ++ +LIN Y
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI-TKRSLQPTVVSFNTLINGYC 286
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+G + E L ++M + P++ ++L++ K + D +F+++ G+ P+D
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 494 FCDCLLY 500
L++
Sbjct: 347 IFTTLIH 353
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 182/408 (44%), Gaps = 54/408 (13%)
Query: 157 ETALLAFEYFKQKI--KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF 214
+ +L F+Y +++I KP H+ Y + + L + ++FDEM +GV ++ ++
Sbjct: 122 QRSLRLFKYMQRQIWCKPNEHI--YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
+ L I Y R G + +L L DR K
Sbjct: 180 TAL-----------------------------------INAYGRNGRYETSLELLDRMKN 204
Query: 275 EKWRVDTVAFSALIKMYGMSG-NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
EK + ++ +I G +++ L ++++M+ G +P++VTYN LL A
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
+A+ ++ M G P+ TY+ L++ + + R E + EM G D YN+L
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
+ A G+ EAM +F M+++G C P+ TY+ L+N++ G+ + L EM
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVAT-----QIPRQ 508
+P+ L+ ++G+ +VV +F+ +++ I PD + +++ + R+
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 509 ELGKITA--CIEKAKPKLGSVVRYLTEEHEGDGDFRKEALELFNSIDD 554
L +TA + +K G + E G +EAL FN++ +
Sbjct: 444 ILQYMTANDIVPSSKAYTGVI------EAFGQAALYEEALVAFNTMHE 485
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/496 (20%), Positives = 209/496 (42%), Gaps = 71/496 (14%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y+ ++ F +++ + L EM G P++ +++ L+ + +A+ F +M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ C P+ N + ++ ++ + G D L+ K+ D ++ LI+++G G +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++++ DM +P+M TY +++A G+ DA+ I + M N P+ Y ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 359 QAYCRARCSEDALSVYKEMKEKG---------------------KDVDKVL--------- 388
+A+ +A E+AL + M E G K+ + +L
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 389 -----YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+N + G +EA+K + DM+ S C PD T +++++YS V E
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS-RCDPDERTLEAVLSVYSFARLVDECRE 583
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVAT 503
EM P+I+ ++ +YGK +R DDV ++ ++L +S
Sbjct: 584 QFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSN------------- 630
Query: 504 QIPRQELGKITACIEKAKPKLGSVVRYLTEEHEGDGDFR--KEALELFNSIDDDVKKSLC 561
Q +G++ + +++ D +++ + L+ NS +
Sbjct: 631 --IHQVIGQM-----------------IKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFY 671
Query: 562 NCLIDLCVSLDVPXXXXXXXXXXXXXEIYTDIQFRSQTRWCLHLKKLSLGAAMTALRVWI 621
N L+D L ++ ++ +++ W + + ++S G TAL VW+
Sbjct: 672 NALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWL 731
Query: 622 NDLSKALESGEELPPV 637
ND++ L G +LP +
Sbjct: 732 NDINDMLLKG-DLPQL 746
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 17/362 (4%)
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKL-FREIKD 191
L+ G N ++ +LD M N +KI P+ ++ YN + R D
Sbjct: 182 LINAYGRNGRYETSLELLDRMKN------------EKISPS--ILTYNTVINACARGGLD 227
Query: 192 FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS 251
+ LF EM G++P+++T++TL++ + + +A F M PD +
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
++ + ++ ++ L + D +++ L++ Y SG+ + V+ M+ G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
PN TY+ LL G++ R D + ++ EM + P+ TY L++ + ++ +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+++ +M E+ + D Y + C G ++A KI M ++ D P + YT +I
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEA 466
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ EA N M G P+I SL++ + + + I ++L+D GI P
Sbjct: 467 FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI-PR 525
Query: 492 DR 493
+R
Sbjct: 526 NR 527
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 256 YARIGNVDMALSLYDRAKTEKW-RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+A G+ +L L+ + + W + + ++ +I + G G D CL V+ +M G
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS-EDALSV 373
++ +Y L+ A GR R + + + M SP+ TY ++ A R E L +
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+ EM+ +G D V YN L CA G DEA +F M G PD TY+ L+ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG-IVPDLTTYSHLVETFG 293
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+ ++ + LL EM G P+I + L+ Y K+ + + +F+Q+ G +P+
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 494 FCDCLLYVATQIPR-QELGKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEALELFNSI 552
LL + Q R ++ ++ ++ + + + E G+G + KE + LF+ +
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 159/345 (46%), Gaps = 3/345 (0%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPARH--VVLYNVTLKLFREIKDFGRAEKLFDEMLQRG 206
+L +V LA E F + V +Y ++ E+KD RA+++ M G
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
N++ ++ L+ +AV + + + +PD +++Y ++ ++ L
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
+ D ++ A S+L++ G + L++ + G PN+ YN L+ ++
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
+ ++ +A+ +++ M K G PN TY+ L+ +CR + ALS EM + G +
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
YN L + FG+ A A+M + +P TYTSL+ Y GK+ +A L +
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINK-KLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
EM G P+I T+L+ +A D VK+FN++ + + P+
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 136/297 (45%), Gaps = 1/297 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L ++ GV PNL ++ L+ H+A F++M P+D + +I
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
++ R G +D ALS ++ +++LI + G+ A ++M +P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+VTY +L+ + A +Y EM G +P+ T+ LL RA DA+ ++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
EM E ++V YN++ + G+ +A + +M G PD ++Y LI+
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG-IVPDTYSYRPLIHGLCL 589
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+ +EA+ ++ + + E N + T L+H + + + ++ + + +++ G+ D
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 147/326 (45%), Gaps = 1/326 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + + D AE EM+ + ++P ++T+++L+ + +KA+ + +M
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
P +++ R G + A+ L++ + + V ++ +I+ Y G+
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+M G P+ +Y L++ + +A +AK + + K N Y LL
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+CR E+ALSV +EM ++G D+D V Y +L D + + +M G
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG-L 678
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+PD+ YTS+I+ S G EA + + MI G PN + T++++ KA ++
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 479 IFNQLLDLGISPDDRFCDCLLYVATQ 504
+ +++ + P+ C L + T+
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTK 764
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E +K++P VV Y + + +A +L+ EM +G+ P++ TF+TL++
Sbjct: 462 EMINKKLEPT--VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV-DTV 282
+ AV+ F +M + +P+ MI Y G++ A + + TEK V DT
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE-FLKEMTEKGIVPDTY 578
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
++ LI ++G + + N + Y LL+ R + +A ++ +EM
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
V+ G + Y L+ + + + + KEM ++G D V+Y + D + G+
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
EA I+ M + G C P+ TYT++IN G V EAE L ++M PN
Sbjct: 699 KEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 140/322 (43%), Gaps = 3/322 (0%)
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
+KP R V YNV ++ + E D +A + EM ++G+ P+ ++ L+ +
Sbjct: 538 VKPNR--VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
A + + + CE ++ +++ + R G ++ ALS+ +D V + LI
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
+ + +M G KP+ V Y +++ A + ++A I++ M+ G P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
N TY A++ C+A +A + +M+ ++V Y D+ G D +
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVE 774
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
+ TY LI + G++ EA L+ MI G P+ + T++++ +
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 470 AKRADDVVKIFNQLLDLGISPD 491
++++N + + GI PD
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPD 856
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 44/263 (16%)
Query: 201 EMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF----EKMPSFECEPDDNLSASMIYVY 256
EM+QRGV +L+ + L+ S+ HK + F ++M +PDD + SMI
Sbjct: 637 EMVQRGVDLDLVCYGVLI----DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
++ G+ A ++D E + V ++A+I +G + + S M+ + + PN
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 317 VTY-----------------------------------NNLLYAMGRAKRARDAKTIYEE 341
VTY N L+ R R +A +
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M+ +G SP+ TY ++ CR + A+ ++ M EKG D+V YN L C G
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 402 ADEAMKIFADMKSSGDCQPDNFT 424
+A ++ +M G P+N T
Sbjct: 873 MGKATELRNEMLRQG-LIPNNKT 894
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 107/245 (43%), Gaps = 1/245 (0%)
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
P+ +++++ + + +A+ L++ + R D ++ +I+ + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ M+ G N+V YN L+ + + ++ +A I +++ P+ TY L+ C+
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
+ E L + EM + + L + G +EA+ + + G P+ F
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG-VSPNLF 368
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
Y +LI+ K EAE L + M + G PN + + L+ ++ + + D + ++
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 484 LDLGI 488
+D G+
Sbjct: 429 VDTGL 433
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
SAL+ ++ + +++DM +G +P++ Y ++ ++ K AK + M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY-NMLFDMC--AHF 399
G N Y L+ C+ + +A+ + K++ K D V Y +++ +C F
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
E M ++ S P +SL+ GK+ EA L+ ++ G PN+
Sbjct: 314 EIGLEMMDEMLCLRFS----PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+L+ K ++ + +F+++ +G+ P+D
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 148/284 (52%), Gaps = 9/284 (3%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCS 225
+ +IKP +VV N + A F +M + GVK N++T+ TL+ AC S +
Sbjct: 434 EDEIKP--NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
V KA+ W+EKM C PD + ++I ++ A+ + ++ K + +D +A++
Sbjct: 492 V-EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
LI ++ N + + +DM+ G KP+ +TYN L+ G+ K + + E+M ++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADE 404
G P TY A++ AYC ++AL ++K+M K + + V+YN+L + + GN +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
A+ + +MK +P+ TY +L + C+ + T+ E LL M
Sbjct: 671 ALSLKEEMKMKM-VRPNVETYNAL---FKCLNEKTQGETLLKLM 710
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 157/398 (39%), Gaps = 87/398 (21%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG--------VKPNLITFSTLVAC 220
KI+P VV + + + + A ++F++M RG +K + I F+TL+
Sbjct: 324 KIRP--DVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDG 379
Query: 221 ASTCSVPHKAVEWFEKMPSFE-CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A E +M E C P+ +I Y R G ++ A + R K ++ +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 280 DTVAFSALIKMYGMSGNYDACLSV--YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
+ V + ++ GM ++ ++V + DM+ G K N+VTY L++A A
Sbjct: 440 NVVTVNTIVG--GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE------------------ 379
YE+M++ G SP+ Y AL+ C+ R DA+ V +++KE
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 380 -----------------KGKDVDKVLYNML------------------------------ 392
+GK D + YN L
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 393 -----FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
D G DEA+K+F DM P+ Y LIN +S +G +A +L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
M PN+ +L + + + ++K+ +++++
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 8/285 (2%)
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
F+ L++C + + KM + PD +I + VD AL ++++ +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 274 TEK------WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG-AKPNMVTYNNLLYAM 326
++ + D++ F+ LI G + MK+ PN VTYN L+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
RA + AK + M ++ PN T ++ CR A+ + +M+++G +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
V Y L C N ++AM + M +G C PD Y +LI+ + + +A ++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAG-CSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
++ GF ++LA L+ L+ A+ V ++ + G PD
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + LF + + + ++ +M + G KP+ IT++TL++ E+M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLY-DRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+P ++I Y +G +D AL L+ D K +TV ++ LI + GN+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK---NGFSPNW 351
LS+ +MK+ +PN+ TYN L + + + +EMV+ N W
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQIRSQW 725
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 90/230 (39%), Gaps = 41/230 (17%)
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+N LL +GR + +M + P+ T L+ C++R ++AL V+++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 379 EKGKD------VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
K D D + +N L D G EA ++ MK C P+ TY LI+ Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTS------------------------------ 462
GK+ A+ +++ M +PN++ + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 463 -----LVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPR 507
L+H + + + ++L+ G SPD + L+ Q+ R
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 1/317 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V YN + ++ + A ++ D+M+ R PN +T++TL++ + +A E
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ S PD S+I N +A+ L++ +++ D ++ LI G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D L++ M++ G +++TYN L+ +A + R+A+ I++EM +G S N TY
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ C++R EDA + +M +G+ DK YN L G+ +A I M S+
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G C+PD TY +LI+ G+V A LL + G A ++ + ++ +
Sbjct: 570 G-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 476 VVKIFNQLLDLGISPDD 492
+ +F ++L+ +P D
Sbjct: 629 AINLFREMLEQNEAPPD 645
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 148/322 (45%), Gaps = 2/322 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+ ++ + E D A ++ ++M++ G + ++ + +V A+ + ++M
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 239 SFECE-PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ + PD +++ + G+V A+ + D E + D ++++I G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ V M PN VTYN L+ + + + +A + + G P+ T+ +L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+Q C R A+ +++EM+ KG + D+ YNML D G DEA+ + M+ SG
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG- 465
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
C TY +LI+ + K EAE + +EM G N + +L+ K++R +D
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 478 KIFNQLLDLGISPDDRFCDCLL 499
++ +Q++ G PD + LL
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLL 547
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 39/356 (10%)
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
+KP H YN L L + E +M G+KP++ TF+ L+
Sbjct: 150 LKPDTH--FYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR------------------ 271
A+ E MPS+ PD+ +++ Y G++D AL + ++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 272 ------------------AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ + + D F+ L+ +G+ + + M G
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P++ TYN+++ + + ++A + ++M+ SPN TY L+ C+ E+A +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+ + KG D +N L N AM++F +M+S G C+PD FTY LI+
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLC 446
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
GK+ EA +L +M G +++ +L+ + KA + + +IF+++ G+S
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 13/265 (4%)
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG- 292
E M S CE + +I YA+ D LS+ D W +D Y
Sbjct: 106 LEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVD------WMIDEFGLKPDTHFYNR 159
Query: 293 -----MSGNYDACLSV-YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+ GN + + ++ M V G KP++ T+N L+ A+ RA + R A + E+M G
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
P+ T+ ++Q Y + AL + ++M E G V N++ G ++A+
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+M + PD +T+ +L+N G V A +++ M++ G++P++ S++
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 467 YGKAKRADDVVKIFNQLLDLGISPD 491
K + V++ +Q++ SP+
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPN 364
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 157/388 (40%), Gaps = 50/388 (12%)
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDF 192
++ GL + +EA+ VLD M+ + + + V YN + +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCS--------------PNTVTYNTLISTLCKENQV 381
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
A +L + +G+ P++ TF++L+ A+E FE+M S CEPD+ +
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI-------------------KMYGM 293
I G +D AL++ + + + ++ LI +++G+
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 294 SGN---YDACL-------------SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
S N Y+ + + M + G KP+ TYN+LL R + A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
I + M NG P+ TY L+ C+A E A + + ++ KG ++ YN +
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLI-NMYSCMGKVTEAEALLNEMIRCGFEPN 456
EA+ +F +M + PD +Y + + + G + EA L E++ GF P
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLL 484
+L L + +VK+ N ++
Sbjct: 682 FSSLYMLAEGLLTLSMEETLVKLVNMVM 709
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P Y +L +GR+ D K I E+M + T+ L+++Y + ++ LSV
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 374 YKEM-KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
M E G D YN + ++ GN+ + ++I S +PD T+ LI
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
++ A +L +M G P+ T+++ Y + D ++I Q+++ G S
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +L D M++ G KP LIT +TLV AV ++M +P++ ++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
V + G +A+ L + + ++D V +S +I G+ D +++++M++ G K
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+++TYN L+ A R D + +M+K SPN T++ L+ ++ + +A +
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
KEM ++G + + YN L D +EA+++ M S G C PD T+ LIN Y
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCK 415
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--- 491
++ + L EM G N + +LV + ++ + + K+F +++ + PD
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 492 -----DRFCD 496
D CD
Sbjct: 476 YKILLDGLCD 485
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 145/297 (48%), Gaps = 7/297 (2%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
L D M++ G +PN +T+ ++ A+E KM + D + +I
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ G++D A +L++ + + ++ D + ++ LI + +G +D + DM PN+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
T++ L+ + + + R+A + +EM++ G +PN TY +L+ +C+ E+A+ + M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
KG D D + +N+L + D+ +++F +M G + TY +L+ + GK
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG-VIANTVTYNTLVQGFCQSGK 453
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL------LDLGI 488
+ A+ L EM+ P+I++ L+ + ++IF ++ LD+GI
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 143/312 (45%), Gaps = 15/312 (4%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF +M+Q P +I F+ L + + + ++M S + MI
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + A S + + DTV F+ L+ + L + M +G KP
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++T N L+ + + DA + + MV+ GF PN TY +L C++ + A+ +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
++M+E+ +D V Y+++ D G+ D A +F +M+ G + D TY +LI +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCN 310
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDVVKIFNQLLDLGISPD 491
G+ + LL +MI+ PN++ + L+ + GK + AD ++K +++ GI+P+
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK---EMMQRGIAPN 367
Query: 492 --------DRFC 495
D FC
Sbjct: 368 TITYNSLIDGFC 379
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 3/332 (0%)
Query: 162 AFEYFKQKI--KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + F+ I +P V+ +N + K + L +M +G+ ++ T S ++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C C A K+ EPD + +++ V AL L DR +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ + L+ ++G + + M G +PN VTY +L M ++ + A +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+M + + Y+ ++ C+ ++A +++ EM+ KG D + YN L +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G D+ K+ DM P+ T++ LI+ + GK+ EA+ LL EM++ G PN +
Sbjct: 312 GRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
SL+ + K R ++ +++ + ++ G PD
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 9/341 (2%)
Query: 130 SEMLVKGLGENVTEREAMIVLDNMVNP----ETALLAFEYFKQKIKPARHVVLYNVTLKL 185
+EM +KG ++ +I N + A L + K+KI P +VV ++V +
Sbjct: 287 NEMEIKGFKADIITYNTLI--GGFCNAGRWDDGAKLLRDMIKRKISP--NVVTFSVLIDS 342
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPD 245
F + A++L EM+QRG+ PN IT+++L+ + +A++ + M S C+PD
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS 305
+I Y + +D L L+ +TV ++ L++ + SG + ++
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 306 DMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
+M +P++V+Y LL + A I+ ++ K+ + Y ++ C A
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
+DA ++ + KG +D YN++ + +A +F M G PD TY
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH-APDELTY 581
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
LI + T A L+ EM GF ++ + ++++
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM 622
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 161/359 (44%), Gaps = 10/359 (2%)
Query: 122 CNPTEQQVSEMLVKGLGENVTEREAM---IVLDNMVNPETALLAFEYFKQ-KIKPAR-HV 176
C + ++ L++ + E + +A+ I++D + + AF F + +IK + +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
+ YN + F + KL +M++R + PN++TFS L+ +A + ++
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M P+ S+I + + ++ A+ + D ++ D + F+ LI Y +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
D L ++ +M + G N VTYN L+ ++ + AK +++EMV P+ +Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
LL C E AL ++ ++++ ++D +Y ++ + D+A +F + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
+ D Y +I+ +++A+ L +M G P+ L L+ +A DD
Sbjct: 539 -VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI----RAHLGDD 592
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 8/292 (2%)
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPA--RHVVLYNVTL 183
+Q + EM+ +G+ N ++I D A + I ++ +N+ +
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLI--DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 184 KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECE 243
+ + +LF EM RGV N +T++TLV A + F++M S
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
PD ++ G ++ AL ++ + + K +D + +I + D +
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ + + G K + YN ++ + R A ++ +M + G +P+ TY L++A+
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+ A + +EMK G D M+ +M + + E K F DM S+
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVSTVKMVINMLS----SGELDKSFLDMLST 638
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
D + ++ DM P ++ +N L A+ + K+ + ++M G + + T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ +CR R A S ++ + G + D V++N L + EA+++ M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
+P T +L+N GKV++A L++ M+ GF+PN
Sbjct: 190 -KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
+A DA ++ +M+++ P + L A + + E L++ K+M+ KG + +Y
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG--IAHSIYT 125
Query: 391 M-----LFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+ F C A M + +PD + +L+N +V+EA L+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGY----EPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+ M+ G +P ++ L +LV+ + D V + +++++ G P++
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 34/378 (8%)
Query: 155 NPETA-----------LLAFEYFKQKIKPARHVVLYNVTLKLFRE---------IKDFGR 194
NP TA + AF +++ ++ H + +N L LF I DF R
Sbjct: 29 NPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTR 88
Query: 195 -------------AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
LF++M G+ P L T + ++ C S P +A + KM
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
EPD S++ Y ++ A++L+D+ ++ + V ++ LI+ + + + +
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
+++ M G++PN+VTYN L+ + R DA + +M+K PN T+ AL+ A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
+ +A +Y M + D Y L + +G DEA ++F M+ +G C P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG-CYPN 327
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFN 481
YT+LI+ + +V + + EM + G N + T L+ Y R D ++FN
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 482 QLLDLGISPDDRFCDCLL 499
Q+ PD R + LL
Sbjct: 388 QMSSRRAPPDIRTYNVLL 405
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 1/297 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LFD++L G KPN++T++TL+ C + AVE F +M + P+ +++
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
IG A L + + + F+ALI + G +Y+ M + P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++ TY +L+ + +A+ ++ M +NG PN Y L+ +C+++ ED + ++
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
EM +KG + + Y +L G D A ++F M SS PD TY L++ C
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM-SSRRAPPDIRTYNVLLDGLCC 410
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
GKV +A + M + + NI+ T ++ K + +D +F L G+ P+
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 1/318 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV Y ++ + + A +LF++M G +PN++T++ LV A
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
M EP+ ++I + ++G + A LY+ D + +LI M
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G D ++ M+ G PN V Y L++ ++KR D I+ EM + G N TY
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+Q YC + A V+ +M + D YN+L D G ++A+ IF M+
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
+ + TYT +I +GKV +A L + G +PN++ T+++ + +
Sbjct: 427 R-EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 475 DVVKIFNQLLDLGISPDD 492
+ +F ++ + G P++
Sbjct: 486 EADSLFKKMKEDGFLPNE 503
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A L + K++I+P +V+ + + F ++ A++L++ M+Q V P++ T+ +
Sbjct: 241 DAAWLLRDMMKRRIEP--NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ + +A + F M C P++ + ++I+ + + V+ + ++ +
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+T+ ++ LI+ Y + G D V++ M A P++ TYN LL + + A
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
I+E M K N TY ++Q C+ EDA ++ + KG + + Y +
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 397 AHFGNADEAMKIFADMKSSG 416
G EA +F MK G
Sbjct: 479 CRRGLIHEADSLFKKMKEDG 498
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V+Y + F + K K+F EM Q+GV N IT++ L+ P A E F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M S PD ++ G V+ AL +++ + + ++ V ++ +I+ G
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
+ ++ + G KPN++TY ++ R +A +++++M ++GF PN Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 152/317 (47%), Gaps = 7/317 (2%)
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPD 245
+ ++ +F AE++ + + G PN+I+++ L+ + A F +M S EP
Sbjct: 149 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 208
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEK---WRVDTVAFSALIKMYGMSGNYDACLS 302
++ + A +++ EK + D + +I MY +GNY+
Sbjct: 209 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 268
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
V+S M G + VTYN+L M ++ IY++M ++ P+ +YA L++AY
Sbjct: 269 VFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
RAR E+ALSV++EM + G YN+L D A G ++A +F M+ PD
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDL 384
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
++YT++++ Y + AE + GFEPNI+ +L+ Y KA + +++++ +
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 483 LLDLGISPDDRFCDCLL 499
+ GI + ++
Sbjct: 445 MRLSGIKANQTILTTIM 461
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
W + F LI YG GN++ V S + +G+ PN+++Y L+ + GR + +A+
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD---VDKVLYNMLF 393
I+ M +G P+ TY +L+ + ++A V++ + ++ K D+ +Y+M+
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
M GN ++A K+F+ M G Q TY SL++ + +V++ + ++M R
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQ-STVTYNSLMSFETSYKEVSK---IYDQMQRSDI 310
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKI 513
+P++++ L+ YG+A+R ++ + +F ++LD G+ P + + LL + I
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL---------DAFAI 361
Query: 514 TACIEKAKPKLGSVVR 529
+ +E+AK S+ R
Sbjct: 362 SGMVEQAKTVFKSMRR 377
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 158/352 (44%), Gaps = 8/352 (2%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K+ +V+ Y ++ + AE +F M G +P+ IT+ ++
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 226
Query: 229 KAVEWFEKM---PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
+A E FE + +PD + MIY+Y + GN + A ++ + TV ++
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
+L+ +Y +Y M+ +P++V+Y L+ A GRA+R +A +++EEM+
Sbjct: 287 SLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
G P Y LL A+ + E A +V+K M+ D Y + + + + A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
K F +K G +P+ TY +LI Y+ V + + +M G + N LT+++
Sbjct: 404 EKFFKRIKVDG-FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA-TQIPRQELGKITAC 516
G+ K + + ++ G+ PD + + LL +A TQ +E ++T
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGI 514
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 146/332 (43%), Gaps = 50/332 (15%)
Query: 113 EKLAKSLDSCNPTEQQVS-EMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIK 171
E + + + S P ++ ++++K E +EA V + +++ + K +K
Sbjct: 194 EAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK---------KSPLK 244
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P + +Y++ + ++++ ++ +A K+F M+ +GV + +T+++L++ ++ K
Sbjct: 245 PDQK--MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI- 301
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+++M + +PD A +I Y R + ALS+++ R A++ L+ +
Sbjct: 302 --YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 292 GMSG----------------------NYDACLSVY---SDM----------KVLGAKPNM 316
+SG +Y LS Y SDM KV G +PN+
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
VTY L+ +A +YE+M +G N ++ A R + AL YKE
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 479
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
M+ G D+ N+L + + +EA ++
Sbjct: 480 MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 160/350 (45%), Gaps = 36/350 (10%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +L +L G PN++TF TL+ +A + F+ M EPD +++I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y + G + M L+ +A + ++D V FS+ I +Y SG+ VY M G P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+VTY L+ + + R +A +Y +++K G P+ TY++L+ +C+ ++Y
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFG---------------------------------- 400
++M + G D V+Y +L D + G
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 401 -NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
DEA+K+F M G +PD T+T+++ + G++ EA L M + G EP+ LA
Sbjct: 510 NRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQE 509
+L+ + K + +++F+ + IS D C+ ++++ + R E
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 3/332 (0%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
Q I P +VV Y + +K + A ++ ++L+RG++P+++T+S+L+ C
Sbjct: 385 QGISP--NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+E M PD + ++ ++ G + A+ + + R++ V F++L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I + +D L V+ M + G KP++ T+ ++ R +A ++ M K G
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P+ Y L+ A+C+ L ++ M+ D + N++ + ++A K
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
F ++ G +PD TY ++I Y + ++ EAE + + F PN + LT L+H+
Sbjct: 623 FFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 468 GKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
K D +++F+ + + G P+ CL+
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 147/318 (46%), Gaps = 1/318 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV++N + + + F A K+F M G+KP++ TF+T++ + +A+ F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M EPD ++I + + + L L+D + K D + +I +
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
+ ++++ +P++VTYN ++ +R +A+ I+E + F PN T
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ C+ + A+ ++ M EKG + V Y L D + + + + K+F +M+
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
G P +Y+ +I+ G+V EA + ++ I P+++A L+ Y K R
Sbjct: 735 KG-ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 475 DVVKIFNQLLDLGISPDD 492
+ ++ +L G+ PDD
Sbjct: 794 EAALLYEHMLRNGVKPDD 811
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 150/383 (39%), Gaps = 73/383 (19%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
PA +VV + + F + + RA LF M QRG++P+LI +STL+ +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ F + + D + +S I VY + G++ A +Y R + + V ++ LIK
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G +Y + G +P++VTY++L+ + R +YE+M+K G+ P+
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 352 PTYA-----------------------------------ALLQAYCRARCSEDALSVYKE 376
Y +L+ +CR ++AL V++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN------ 430
M G D + + + G +EA+ +F M G +PD Y +LI+
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG-LEPDALAYCTLIDAFCKHM 580
Query: 431 ------------------------------MYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
++ C ++ +A N +I EP+I+
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH-RIEDASKFFNNLIEGKMEPDIVTY 639
Query: 461 TSLVHLYGKAKRADDVVKIFNQL 483
+++ Y +R D+ +IF L
Sbjct: 640 NTMICGYCSLRRLDEAERIFELL 662
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 151/339 (44%), Gaps = 15/339 (4%)
Query: 134 VKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVT--LKLFREIKD 191
VK LG+++ R ++V +++++ L F + +K R + +Y + + F +
Sbjct: 485 VKMLGQSI--RLNVVVFNSLIDGWCRL---NRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 192 F----GRAEK---LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEP 244
GR E+ LF M + G++P+ + + TL+ P ++ F+ M +
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D + +I++ + ++ A ++ K D V ++ +I Y D ++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+KV PN VT L++ + + A ++ M + G PN TY L+ + ++
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
E + +++EM+EKG V Y+++ D G DEA IF + PD
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVA 778
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
Y LI Y +G++ EA L M+R G +P+ L +L
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 174/428 (40%), Gaps = 41/428 (9%)
Query: 101 LKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETAL 160
+K SS ++ KS D + ML +G+ NV I++ +
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVY-KRMLCQGISPNVVTYT--ILIKGLCQDGRIY 408
Query: 161 LAFEYFKQKIKPARH--VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
AF + Q +K +V Y+ + F + + L+++M++ G P+++ + LV
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
S + A+ + KM + + S+I + R+ D AL ++ +
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY------------------- 319
D F+ ++++ M G + L ++ M +G +P+ + Y
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 320 ----------------NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
N +++ + + R DA + +++ P+ TY ++ YC
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
R ++A +++ +K + V +L + + D A+++F+ M G +P+
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAV 707
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
TY L++ +S + + L EM G P+I++ + ++ K R D+ IF+Q
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 484 LDLGISPD 491
+D + PD
Sbjct: 768 IDAKLLPD 775
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 152/317 (47%), Gaps = 7/317 (2%)
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPD 245
+ ++ +F AE++ + + G PN+I+++ L+ + A F +M S EP
Sbjct: 156 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 215
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEK---WRVDTVAFSALIKMYGMSGNYDACLS 302
++ + A +++ EK + D + +I MY +GNY+
Sbjct: 216 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 275
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
V+S M G + VTYN+L M ++ IY++M ++ P+ +YA L++AY
Sbjct: 276 VFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
RAR E+ALSV++EM + G YN+L D A G ++A +F M+ PD
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDL 391
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
++YT++++ Y + AE + GFEPNI+ +L+ Y KA + +++++ +
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 483 LLDLGISPDDRFCDCLL 499
+ GI + ++
Sbjct: 452 MRLSGIKANQTILTTIM 468
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
W + F LI YG GN++ V S + +G+ PN+++Y L+ + GR + +A+
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD---VDKVLYNMLF 393
I+ M +G P+ TY +L+ + ++A V++ + ++ K D+ +Y+M+
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
M GN ++A K+F+ M G Q TY SL++ + +V++ + ++M R
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQ-STVTYNSLMSFETSYKEVSK---IYDQMQRSDI 317
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKI 513
+P++++ L+ YG+A+R ++ + +F ++LD G+ P + + LL + I
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL---------DAFAI 368
Query: 514 TACIEKAKPKLGSVVR 529
+ +E+AK S+ R
Sbjct: 369 SGMVEQAKTVFKSMRR 384
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 158/352 (44%), Gaps = 8/352 (2%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K+ +V+ Y ++ + AE +F M G +P+ IT+ ++
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 229 KAVEWFEKM---PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
+A E FE + +PD + MIY+Y + GN + A ++ + TV ++
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
+L+ +Y +Y M+ +P++V+Y L+ A GRA+R +A +++EEM+
Sbjct: 294 SLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
G P Y LL A+ + E A +V+K M+ D Y + + + + A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
K F +K G +P+ TY +LI Y+ V + + +M G + N LT+++
Sbjct: 411 EKFFKRIKVDG-FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA-TQIPRQELGKITAC 516
G+ K + + ++ G+ PD + + LL +A TQ +E ++T
Sbjct: 470 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGI 521
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 146/332 (43%), Gaps = 50/332 (15%)
Query: 113 EKLAKSLDSCNPTEQQVS-EMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIK 171
E + + + S P ++ ++++K E +EA V + +++ + K +K
Sbjct: 201 EAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK---------KSPLK 251
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P + +Y++ + ++++ ++ +A K+F M+ +GV + +T+++L++ ++ K
Sbjct: 252 PDQK--MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI- 308
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+++M + +PD A +I Y R + ALS+++ R A++ L+ +
Sbjct: 309 --YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 292 GMSG----------------------NYDACLSVY---SDM----------KVLGAKPNM 316
+SG +Y LS Y SDM KV G +PN+
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
VTY L+ +A +YE+M +G N ++ A R + AL YKE
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
M+ G D+ N+L + + +EA ++
Sbjct: 487 MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + L +++ F A L D M R V+ ++ TF+ L+ + +AV F +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ C PD + +I +R A S +D K +++ D + ++ L++ + +G
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
V+ +MK+ G +PN+ TY+ ++ A+ R + A ++ +M+ +G +PN T+ L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ + +A +E L VY +MK+ G + D + YN L + N + A+K+ M C
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK-KC 391
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+ + T+ ++ V A + ++M+ EPN + L+ ++ +K D V+K
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLK 451
Query: 479 IFNQLLDLGISPD 491
+ ++ D + P+
Sbjct: 452 MKKEMDDKEVEPN 464
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 143/309 (46%), Gaps = 5/309 (1%)
Query: 148 IVLDNMVNPETALLA---FEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
IV+ N+ A A F+ K + +P V++Y ++ + + AEK+F EM
Sbjct: 226 IVISNLSRKRRASEAQSFFDSLKDRFEP--DVIVYTNLVRGWCRAGEISEAEKVFKEMKL 283
Query: 205 RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
G++PN+ T+S ++ C +A + F M C P+ +++ V+ + G +
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
L +Y++ K DT+ ++ LI+ + N + + V + M + N T+N +
Sbjct: 344 VLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR 403
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
+ + + A +Y +M++ PN TY L++ + ++ ++ L + KEM +K +
Sbjct: 404 YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEP 463
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
+ Y +L M G+ + A K+F +M P Y ++ G++ + E L
Sbjct: 464 NVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEEL 523
Query: 445 LNEMIRCGF 453
+ +MI+ G
Sbjct: 524 VEKMIQKGL 532
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
YN ++ G+ ++ A + + M + T+ L++ Y RA + +A+ + M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
+ G DK+ ++++ + A EA F +K +PD YT+L+ + G++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR--FEPDVIVYTNLVRGWCRAGEI 271
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDVVKIFNQLLDLGISPDDRFC 495
+EAE + EM G EPN+ + ++ G+ RA DV F +LD G +P+
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV---FADMLDSGCAPNAITF 328
Query: 496 DCLLYVATQIPRQELGKITACIEKAKPKLGS-----VVRYLTEEHEGDGDFRKEALELFN 550
+ L+ V + R E K+ + K KLG +L E H D + + A+++ N
Sbjct: 329 NNLMRVHVKAGRTE--KVLQVYNQMK-KLGCEPDTITYNFLIEAHCRDENL-ENAVKVLN 384
Query: 551 SI 552
++
Sbjct: 385 TM 386
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 168/353 (47%), Gaps = 8/353 (2%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
ALL + + + K P+ V YNV L+ K F A LFDEM QR + P+ T+STL+
Sbjct: 140 ALLDWVHEEAKYTPS--VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLI 197
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
+ A+ W +KM D L +++I + R+ + A+S++ R K
Sbjct: 198 TSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGIT 257
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D VA++++I +YG + + + +M G PN V+Y+ LL + +A ++
Sbjct: 258 PDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSV 317
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ EM + + + T ++ Y + ++A ++ +++ + + V YN + +
Sbjct: 318 FAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 377
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
EA+ +F M+ D + + TY ++I +Y + +A L+ EM G EPN +
Sbjct: 378 AELFGEAIHLFRLMQRK-DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELG 511
++++ ++GKA + D +F +L G+ D +LY + + +G
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVE-----IDQVLYQTMIVAYERVG 484
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 153/324 (47%), Gaps = 5/324 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V YN + ++ + K F A L EM + GV PN +++STL++ +A+ F
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M C D MI VY ++ V A L+ + + V+++ ++++YG +
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + ++ M+ + N+VTYN ++ G+ A + +EM G PN TY+
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
++ + +A + A +++++++ G ++D+VLY + G A ++ ++K
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK-- 497
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
PDN + I + + G+ EA + + G +I +++LY + +R +
Sbjct: 498 ---LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVN 554
Query: 476 VVKIFNQLLDLGISPDDRFCDCLL 499
V+++F ++ G PD +L
Sbjct: 555 VIEVFEKMRTAGYFPDSNVIAMVL 578
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 154/326 (47%), Gaps = 15/326 (4%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
K I+P +VV YN L+++ E + FG A LF M ++ ++ N++T++T++
Sbjct: 358 KMDIEP--NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
KA ++M S EP+ +++I ++ + G +D A +L+ + ++ +D V +
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+I Y G + ++K+ P+ + + + +A R +A ++ + ++G
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
+ + ++ Y R + + + V+++M+ G D + M+ + ++A
Sbjct: 532 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKAD 591
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI----LALTS 462
++ +M+ G PD + ++++YS E+L R +PN+ L L
Sbjct: 592 TVYREMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQ---RLESDPNVNSKELHLV- 646
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGI 488
+ LY +A + +D ++ N++ + GI
Sbjct: 647 VAALYERADKLNDASRVMNRMRERGI 672
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 159/354 (44%), Gaps = 25/354 (7%)
Query: 162 AFEYFKQKIKPARH--VVLYNVTLKLFREIKD------FGRAEKLFDEMLQRGVKPNLIT 213
A++ K+ +K V+YN+ + KD AEK + EML GV N I
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
S+ C + KA +M PD + + ++ +++A L++ K
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
D ++ ++ + +G + +++M+ +G PN+VTY L++A +AK+
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM--KEKGKDVDK----- 386
A ++E M+ G PN TY+AL+ +C+A E A +++ M + DVD
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630
Query: 387 ---------VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
V Y L D +EA K+ M G C+P+ Y +LI+ +GK
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CEPNQIVYDALIDGLCKVGK 689
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ EA+ + EM GF + +SL+ Y K KR D K+ +++L+ +P+
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 22/364 (6%)
Query: 129 VSEMLVKG-LGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
+ EM+ +G + + T + + L N E A L FE K+ A V Y + + F
Sbjct: 471 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA-DVYTYTIMVDSFC 529
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+ +A K F+EM + G PN++T++ L+ A E FE M S C P+
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
+++I + + G V+ A +++R K D + MY Y D
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-------VDMY---------FKQYDDN 633
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
+PN+VTY LL ++ R +A+ + + M G PN Y AL+ C+
Sbjct: 634 ---SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
++A V EM E G Y+ L D D A K+ + M + C P+ YT
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTE 749
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+I+ +GK EA L+ M G +PN++ T+++ +G + + +++ ++ G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 488 ISPD 491
++P+
Sbjct: 810 VAPN 813
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 17/315 (5%)
Query: 185 LFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEP 244
LF E DF + M PN++T+STL+ + M C P
Sbjct: 317 LFEEAMDF------LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP 370
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA----- 299
+ S+++ Y G+ A L + V ++ LI + G+ D+
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG--SICGDKDSLNCDL 428
Query: 300 ---CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
YS+M G N + ++ + A + A ++ EM+ GF P+ TY+
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+L C A E A +++EMK G D Y ++ D G ++A K F +M+ G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
C P+ TYT+LI+ Y KV+ A L M+ G PNI+ ++L+ + KA + +
Sbjct: 549 -CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 477 VKIFNQLLDLGISPD 491
+IF ++ PD
Sbjct: 608 CQIFERMCGSKDVPD 622
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 7/291 (2%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
++Y+ + ++ A+++ EM + G L T+S+L+ A + K
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M C P+ + MI ++G D A L + + + + V ++A+I +GM G
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ CL + M G PN VTY L+ + A + EEM + +WPT+ A
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT----HWPTHTA 850
Query: 357 LLQAYCRARCSE--DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+ E ++L + E+ + +Y +L D + A+++ ++ +
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 415 SGDCQPD-NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
D + TY SLI KV A L +EM + G P + + SL+
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 140/376 (37%), Gaps = 62/376 (16%)
Query: 98 KQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVS-----EMLVKGLGENVTEREAMIVLDN 152
++++ + + +S K+ L CN ++ +++ EM GL +V M+ D+
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYL--CNASKMELAFLLFEEMKRGGLVADVYTYTIMV--DS 527
Query: 153 MVNPETALLAFEYFKQ--KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPN 210
A ++F + ++ +VV Y + + + K A +LF+ ML G PN
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 211 LITFSTLVACASTCSVPHKAVEWFEK---------------------------------- 236
++T+S L+ KA + FE+
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 237 -----------------MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
M CEP+ + ++I ++G +D A + +
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+S+LI Y D V S M PN+V Y ++ + + + +A +
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+ M + G PN TY A++ + E L + + M KG + V Y +L D C
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 400 GNADEAMKIFADMKSS 415
G D A + +MK +
Sbjct: 828 GALDVAHNLLEEMKQT 843
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 45/279 (16%)
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
Y ++G AL+L +TE + DTV ++ LI + ++ + + M+
Sbjct: 278 YSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
PN+VTY+ LL K+ K + M+ G P+ + +L+ AYC + A +
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 374 YKEMKEKGKDVDKVLYNML----------------------------------------F 393
K+M + G V+YN+L F
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 394 DMC-AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
C G ++A + +M G PD TY+ ++N K+ A L EM R G
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFI-PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
++ T +V + KA + K FN++ ++G +P+
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 20/333 (6%)
Query: 116 AKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARH 175
A S++ C P Q V + L+ GL + EA V E + F PA
Sbjct: 664 AMSMEGCEPN-QIVYDALIDGLCKVGKLDEA-----QEVKTEMSEHGF--------PAT- 708
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+ Y+ + + ++K A K+ +ML+ PN++ ++ ++ +A + +
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M C+P+ +MI + IG ++ L L +R ++ + V + LI +G
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D ++ +MK + Y ++ G K ++ + +E+ ++ +P Y
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVI--EGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 356 ALLQAYCRARCSEDALSVYKEMKE-KGKDVD-KVLYNMLFDMCAHFGNADEAMKIFADMK 413
L+ +A+ E AL + +E+ VD YN L + + A ++F++M
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
G P+ ++ SLI K++EA LL+
Sbjct: 947 KKG-VIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 11/337 (3%)
Query: 161 LAFEYFKQKIKPARHVVLYNV---TLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT---F 214
L + +F K + Y V + + +++ FG L +EM R P LI F
Sbjct: 113 LGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELF 170
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
L+ ++ ++ KAVE ++MP + EPD+ + ++ + G+V A +++ +
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR- 229
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
EK+ + F++L+ + G V MK G +P++V + NLL A + D
Sbjct: 230 EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRA-RCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
A + +M K GF PN Y L+QA CR + ++A+ V+ EM+ G + D V Y L
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
+G D+ + DM+ G P TY ++ + + E L+ +M R G
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKG-VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
P++L ++ L K + V+++N++ G+SP
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWF 234
+V++ L + A L ++M +RG +PN+ ++ L+ A T +A+ F
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M + CE D ++I + + G +D S+ D + + V + ++ +
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
++ CL + MK G P+++ YN ++ + ++A ++ EM NG SP T+
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKG 381
++ + +A + +KEM +G
Sbjct: 451 VIMINGFTSQGFLIEACNHFKEMVSRG 477
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
+ L++ + A + A+ V EM + G + D+ ++ L D G+ EA K+F DM+
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 414 SSGDCQPDNFTY-TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
P N Y TSL+ + GK+ EA+ +L +M G EP+I+ T+L+ Y A +
Sbjct: 230 EKF---PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 473 ADDVVKIFNQLLDLGISPD 491
D + N + G P+
Sbjct: 287 MADAYDLMNDMRKRGFEPN 305
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 8/329 (2%)
Query: 177 VLYN-VTLKLFREIK----DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
V+YN VT L E+ AEKLFDEM +RG++ ++ +++L++ +A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
F+++ P ++I ++G + A L + +++ + V F+ LI Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G D +Y M+ G + ++ T N + R KR +AK M++ G +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN-MLFDMCAHFGNADEAMKIFA 410
+Y L+ YC+ E+A ++ EM KG + + YN M++ C G EA K+ A
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ-GKIKEARKLRA 528
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
+M+++G PD++TYTSLI+ V EA L +EM G + N + T ++ KA
Sbjct: 529 NMEANG-MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 471 KRADDVVKIFNQLLDLGISPDDRFCDCLL 499
++D+ +++++ G + D++ L+
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
+D+ L ++ R ++ + + +++ G + + + V G KP TYN
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
++ A + + + + + M K+G N TY L++ + DA ++ EM+E+G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+ D +Y L GN A +F ++ G P ++TY +LI+ +G++ A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG-LSPSSYTYGALIDGVCKVGEMGAA 383
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYV 501
E L+NEM G + +L+ Y + D+ I++ + G D C+ +
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 502 ATQIPRQELGK 512
++ R + K
Sbjct: 444 FNRLKRYDEAK 454
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+ ++Y +G ++ L V+ M G + + L A + +R I+ MV +G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH---FGNAD 403
+ +++ CR E + + KE KG + YN + + F +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
+K+ MK G + TYT L+ + GK+++AE L +EM G E ++ TSL
Sbjct: 280 GVLKV---MKKDG-VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 464 VH---LYGKAKRADDVVKIFNQLLDLGISP 490
+ G KRA +F++L + G+SP
Sbjct: 336 ISWNCRKGNMKRA---FLLFDELTEKGLSP 362
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A++LF EM +GV+PN IT++ ++ +A + M + +PD S+I+
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
NVD A+ L+ + ++V ++ +I +G D +Y +MK G
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 315 NMVTYNNLLYAM 326
+ Y L+ +M
Sbjct: 608 DNKVYTALIGSM 619
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 41/348 (11%)
Query: 184 KLFREIKDFGR---AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
KL + + GR A +F+ +++ G KP+LIT++TLV + H + K+
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG----- 295
+PD L ++I + GN+D A+ ++++ K + F+ LIK YG G
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 296 ---------------NYDAC----------------LSVYSDMKVLGAKPNMVTYNNLLY 324
N C ++ M+ G KP++VT+N L
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 325 AMGRAKRARDAK-TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
A R A+ I M+ N PN T ++ YC E+AL + MKE G
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+ ++N L + + D ++ M+ G +PD T+++L+N +S +G + E
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG-VKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ +M+ G +P+I A + L Y +A + +I NQ+ G+ P+
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 23/341 (6%)
Query: 112 LEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIK 171
EK+ +S C PT + L+KG G+ E+ +LD M+ E ++
Sbjct: 412 FEKMKES--GCKPTASTFN-TLIKGYGKIGKLEESSRLLDMMLRDEM-----------LQ 457
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC----ASTCSVP 227
P N+ ++ + + A + +M GVKP+++TF+TL STC+
Sbjct: 458 PNDRTC--NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+ +M + +P+ +++ Y G ++ AL + R K + F++L
Sbjct: 516 DMIIP---RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
IK + + D V M+ G KP++VT++ L+ A + + IY +M++ G
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P+ ++ L + Y RA E A + +M++ G + V+Y + G +AM+
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
++ M P+ TY +LI + + +AE LL +M
Sbjct: 693 VYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
L F Y +++ ++ ++N +K F I D ++ D M + GVKP+++TFSTL+
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD 280
S+ + E + M +PD + + + YAR G + A + ++ + R +
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
V ++ +I + +G + VY M ++G PN+ TY L++ G AK+ A+ +
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELL 730
Query: 340 EEMVKNGFSPNWPTYAALLQAY 361
++M P T + +
Sbjct: 731 KDMEGKNVVPTRKTMQLIADGW 752
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
S+++ + G KP+++TY L+ A+ R K ++ ++ KNG P+ + A++ A
Sbjct: 340 SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS 399
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
+ + A+ ++++MKE G +N L G +E+ ++ M QP+
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDVVK 478
+ T L+ + K+ EA ++ +M G +P+++ +L Y G A+D+
Sbjct: 460 DRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM-- 517
Query: 479 IFNQLLDLGISPDDRFCDCLL 499
I ++L + P+ R C ++
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIV 538
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A + F M + GV PNL F++L+ + E + M F +PD ++++
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
++ +G++ +Y D AFS L K Y +G + + + M+ G +P
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVK-NGFSPNWPTYAALLQAYCRARCSEDALSV 373
N+V Y ++ A + A +Y++M G SPN TY L+ + A+ A +
Sbjct: 670 NVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEEL 729
Query: 374 YKEMKEKGKDV 384
K+M +GK+V
Sbjct: 730 LKDM--EGKNV 738
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 141/297 (47%), Gaps = 2/297 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
AE++F+ M +KP+++T++T++ KA+E M + E D +MI
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ ++LY + +V AFS +I G + +V+ +M G+KP
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+ Y L+ ++ DA + M+ GF P+ TY+ ++ C+ E+AL +
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+ G ++ + Y+ L D G DEA ++F +M G C D++ Y +LI+ ++
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG-CTRDSYCYNALIDAFTK 479
Query: 435 MGKVTEAEALLNEM-IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
KV EA AL M G + + T L+ K R ++ +K+++ ++D GI+P
Sbjct: 480 HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 147/321 (45%), Gaps = 13/321 (4%)
Query: 189 IKDFGR---AEKL---FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
IK FG+ E+L + +M + G++P L T++ L+ + A FE M S
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS 302
+PD +MI Y + G A+ +T D + + +I+ ++ +C++
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
+Y +M G + ++ ++ + + + + T++E M++ G PN Y L+ Y
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
++ EDA+ + M ++G D V Y+++ + G +EA+ F + G ++
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-LAINS 432
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
Y+SLI+ G+V EAE L EM G + +L+ + K ++ D+ + +F +
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 483 LLDLGISPDDRFCDCLLYVAT 503
+ ++ CD +Y T
Sbjct: 493 M------EEEEGCDQTVYTYT 507
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
S++ V A +VD + K ++ + A +ALIK +G G + L V+ MK
Sbjct: 156 VSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKE 215
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +P + TYN L+ + A A+ ++E M P+ TY +++ YC+A ++
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
A+ ++M+ +G + DK+ Y + C + + ++ +M G P + ++ +I
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH-AFSLVI 334
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
GK+ E + MIR G +PN+ T L+ Y K+ +D +++ ++++D G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 490 PD 491
PD
Sbjct: 395 PD 396
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 9/339 (2%)
Query: 157 ETALLAFEYFKQ-KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
++A FE + +IKP +V YN +K + + +A + +M RG + + IT+
Sbjct: 239 DSAERVFEVMESGRIKP--DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
T++ S V +++M + + + +I + G ++ ++++ +
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
+ + ++ LI Y SG+ + + + M G KP++VTY+ ++ + + R +A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+ +G + N Y++L+ +A ++A +++EM EKG D YN L D
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
DEA+ +F M+ C +TYT L++ + EA L + MI G P
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Query: 456 N---ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
AL++ + L GK RA KI ++L +G+ D
Sbjct: 537 TAACFRALSTGLCLSGKVARA---CKILDELAPMGVILD 572
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 36/332 (10%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSA 250
DFG L+ EM ++G++ FS ++ ++ FE M +P+ +
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
+I YA+ G+V+ A+ L R E ++ D V +S ++ +G + L + +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G N + Y++L+ +G+A R +A+ ++EEM + G + + Y AL+ A+ + R ++A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 371 LSVYKEMKEK-GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
++++K M+E+ G D Y +L +EA+K++ DM P + +L
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW-DMMIDKGITPTAACFRALS 545
Query: 430 NMYSCMGKVTEAEALLNEMIRCGF------EPNILAL----------------------- 460
GKV A +L+E+ G E I L
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREV 605
Query: 461 -----TSLVHLYGKAKRADDVVKIFNQLLDLG 487
T +++ K +AD +K+ + + +G
Sbjct: 606 PGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+ Y +L+ + AK + + E+ K F AL++++ + E+ L V+
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
++MKE G + YN L + D A ++F M+ SG +PD TY ++I Y
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME-SGRIKPDIVTYNTMIKGYCK 269
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
G+ +A L +M G E + + +++ V ++ ++ + GI
Sbjct: 270 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 11/351 (3%)
Query: 161 LAFEYFKQKIKPARH---VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT---F 214
L + +F K R+ + +Y +K+ +++ FG L +EM R P LI F
Sbjct: 129 LGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELF 186
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
LV ++ + KA+E ++MP F EPD+ + ++ + G+V A L++ +
Sbjct: 187 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM 246
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
++ V+ F++L+ + G V M G +P++V Y NLL A + D
Sbjct: 247 -RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A + +M + GF PN Y L+QA C+ E+A+ V+ EM+ + D V Y L
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
+G D+ + DM G P TY ++ + E L+ +M + +
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD-DRFCDCLLYVATQ 504
P+I ++ L K + V+++N++ + G+SP D F + +A+Q
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT-YAALLQAYCRARCSEDALSVYKE 376
Y +++ + + ++ + EEM K P + L+Q + A + A+ V E
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY-TSLINMYSCM 435
M + G + D+ ++ L D G+ +A K+F DM+ P N Y TSL+ + +
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF---PVNLRYFTSLLYGWCRV 265
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC 495
GK+ EA+ +L +M GFEP+I+ T+L+ Y A + D + + G P+
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 496 DCLLYVATQIPRQE 509
L+ ++ R E
Sbjct: 326 TVLIQALCKVDRME 339
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 102/222 (45%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A+ + +M + G +P+++ ++ L++ + A + M EP+ N +I
Sbjct: 271 AKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQ 330
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
++ ++ A+ ++ + + D V ++AL+ + G D C V DM G P
Sbjct: 331 ALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP 390
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ +TY +++ A + + + + E+M + + P+ Y +++ C+ ++A+ ++
Sbjct: 391 SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLW 450
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
EM+E G + ++ + A G EA F +M + G
Sbjct: 451 NEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 155/310 (50%), Gaps = 8/310 (2%)
Query: 189 IKDFGRAEKL------FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
I+ +AEKL F + + G K + T++ L+ +P+KA E +E M +
Sbjct: 250 IQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDS 309
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS 302
D + +I A+ G +D A L+ + K K R FS+L+ G +G D +
Sbjct: 310 LLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMK 369
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
VY +M+ G +P+ + +L+ + +A + A +++EM K+GF PN+ Y +++++
Sbjct: 370 VYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHA 429
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
++ E A++V+K+M++ G Y+ L +M A G D AMKI+ M ++G +P
Sbjct: 430 KSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG-LRPGL 488
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
+Y SL+ + + V A +L EM G+ ++ A + ++ +Y K D +K
Sbjct: 489 SSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA-SDVLMIYIKDASVDLALKWLRF 547
Query: 483 LLDLGISPDD 492
+ GI ++
Sbjct: 548 MGSSGIKTNN 557
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 146/324 (45%), Gaps = 4/324 (1%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK---AVEWFE 235
Y V + +DF + LF+EM+Q ++F+ + K A F+
Sbjct: 208 YVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFK 267
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
K C+ D +++ ++ G A +Y+ + +D + +I SG
Sbjct: 268 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 327
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
DA ++ MK +P+ +++L+ +MG+A R + +Y EM G P+ +
Sbjct: 328 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+L+ +Y +A + AL ++ EMK+ G + LY M+ + A G + AM +F DM+ +
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G P TY+ L+ M++ G+V A + N M G P + + SL+ L + D
Sbjct: 448 GFL-PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDV 506
Query: 476 VVKIFNQLLDLGISPDDRFCDCLL 499
KI ++ +G S D D L+
Sbjct: 507 AGKILLEMKAMGYSVDVCASDVLM 530
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDD-NLSASMIYVYAR---IGNVDMALSLYDRAKTEK 276
AS+ + + V+ ++ P E + D +M+++ + VD ALSL+ AK +
Sbjct: 140 ASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQP 199
Query: 277 WRV-----------------DTV----------------------AFSALIKMYGMSGNY 297
W + D V A++ +I+ +
Sbjct: 200 WYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKL 259
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ + + G K + TYNNL+ A IYE M K + TY +
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ + ++ + A ++++MKE+ +++ L D G D +MK++ +M+ G
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
+P + SLI+ Y+ GK+ A L +EM + GF PN T ++ + K+ + + +
Sbjct: 380 -RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 478 KIFNQLLDLGISPDDRFCDCLL 499
+F + G P CLL
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLL 460
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 171/375 (45%), Gaps = 8/375 (2%)
Query: 119 LDSCNPTEQQVSEMLVKGLG-ENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVV 177
D N + V+ ML++G +++T M L + + A + F + KP +V
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK---DLFYRIPKP--EIV 354
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQR-GVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
++N + F A+ + +M+ G+ P++ T+++L+ + A+E
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M + C+P+ ++ + ++G +D A ++ + + + +TV F+ LI +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ ++ +M G KP++ T+N+L+ + + A + +M+ G N TY
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ A+ R ++A + EM +G +D++ YN L G D+A +F M G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
P N + LIN G V EA EM+ G P+I+ SL++ +A R +D
Sbjct: 595 H-APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 477 VKIFNQLLDLGISPD 491
+ +F +L GI PD
Sbjct: 654 LTMFRKLQAEGIPPD 668
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 1/282 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+V Y + + F ++ A + +EM G+KPN + F+ L++ +AVE F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+MP C+PD S+I + + AL L +E +TV ++ LI +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G + ++M G+ + +TYN+L+ + RA A++++E+M+++G +P+ +
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ CR+ E+A+ KEM +G D V +N L + G ++ + +F +++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
G PD T+ +L++ G V +A LL+E I GF PN
Sbjct: 663 EG-IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 183/468 (39%), Gaps = 89/468 (19%)
Query: 102 KKSYAATSSPLEKLAKSLDSCNPTEQQ---VSEMLVKGLGENVTEREAMIVLDNMVNPET 158
K + ++ L +++ SC PT + V E+LV G V
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVA---------------- 201
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A + ++ +KI P + + V +K F + + A L +M + G PN + + TL+
Sbjct: 202 ANVFYDMLSRKIPPT--LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDD----------------NLSASMI--------- 253
S C+ ++A++ E+M C PD N +A M+
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 254 -----YVY-----ARIGNVDMALSLYDRAKTEKWRV------------------------ 279
Y Y +IG VD A L+ R + +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 280 --------DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
D +++LI Y G L V DM+ G KPN+ +Y L+ + +
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
+A + EM +G PN + L+ A+C+ +A+ +++EM KG D +N
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 392 LFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRC 451
L A+ + DM S G + TY +LIN + G++ EA L+NEM+
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 452 GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
G + + SL+ +A D +F ++L G +P + C+ L+
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 150/378 (39%), Gaps = 32/378 (8%)
Query: 154 VNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT 213
+N T++ F + + +Y V + +F ++L +M G+
Sbjct: 89 LNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL 148
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPS-FECEPDDNLSASMIYVYARIGNVDMALSLYDRA 272
F +++ P + +M + + CEP ++ + +A +++
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 208
Query: 273 KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
+ K F ++K + D+ LS+ DM G PN V Y L++++ + R
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG----------- 381
+A + EEM G P+ T+ ++ C+ +A + M +G
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 382 -------------KDV-------DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
KD+ + V++N L G D+A + +DM +S PD
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFN 481
TY SLI Y G V A +L++M G +PN+ + T LV + K + D+ + N
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 482 QLLDLGISPDDRFCDCLL 499
++ G+ P+ +CL+
Sbjct: 449 EMSADGLKPNTVGFNCLI 466
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ V YN + F + A KL +EM+ +G + IT+++L+ KA F
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
EKM P + +I R G V+ A+ D V F++LI +
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G + L+++ ++ G P+ VT+N L+ + + DA + +E +++GF PN T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 355 AALLQA 360
+ LLQ+
Sbjct: 708 SILLQS 713
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 181/421 (42%), Gaps = 44/421 (10%)
Query: 123 NPTEQQVSEMLVKGLGENVTEREAMIVLDNMV---NPETALLAFEYFK-QKIKPARHVVL 178
N EQ EML + L ++ +I D NPE + E K I+P+ ++
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLI--DGYCKAGNPEKSFKVRERMKADHIEPS--LIT 286
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE--- 235
+N LK + AE + EM G P+ TFS L S+ A+ +E
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 236 ----KMPSFECE----------------------------PDDNLSASMIYVYARIGNVD 263
KM ++ C P++ + +MI Y R G++
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
A + + + + D +A++ LI+ + G + + MK+ G P++ TYN L+
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
GR I +EM NG PN +Y L+ C+ +A V ++M+++G
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+YNML D C G ++A + +M G + + TY +LI+ S GK++EAE
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVAT 503
LL E+ R G +P++ SL+ YG A + ++ ++ GI P + L+ + T
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 504 Q 504
+
Sbjct: 646 K 646
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 3/331 (0%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
+I P+ V +YNV + + K AE+LFDEML R + P+LIT++TL+ P
Sbjct: 209 RIYPS--VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE 266
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
K+ + E+M + EP +++ + G V+ A ++ K + D FS L
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
Y + +A L VY G K N T + LL A+ + + A+ I + G
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
PN Y ++ YCR A + M+++G D + YN L G + A K
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
MK G P TY LI Y + + +L EM G PN+++ +L++
Sbjct: 447 VNKMKLKG-VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 469 KAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
K + + + + D G+SP R + L+
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 158/349 (45%), Gaps = 9/349 (2%)
Query: 148 IVLDNMVNPETALLAFEYF----KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEML 203
++LD++V + + F + +P++ +Y ++ ++ D G+ +LF+ M
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKF--MYGKAIQAAVKLSDVGKGLELFNRMK 206
Query: 204 QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVD 263
+ P++ ++ L+ + A + F++M + P ++I Y + GN +
Sbjct: 207 HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE 266
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
+ + +R K + + F+ L+K +G + +V +MK LG P+ T++ L
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
++A A +YE V +G N T + LL A C+ E A + KG
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 384 VDKVLYNMLFDMCAHFGNADEA-MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
++V+YN + D G+ A MKI A M+ G +PD+ Y LI + +G++ AE
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEA-MEKQG-MKPDHLAYNCLIRRFCELGEMENAE 444
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+N+M G P++ L+ YG+ D I ++ D G P+
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 10/295 (3%)
Query: 164 EYFKQKIKPAR-HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
E K K+K V YN+ + + +F + + EM G PN++++ TL+ C
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
S +A M P + +I G ++ A + ++ V
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
++ LI M+G + ++ G KP++ TYN+L+ G A + +YEEM
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
++G P TY LL + C E ++ EM K D ++YN + A G+
Sbjct: 626 KRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMSLKP---DLLVYNGVLHCYAVHGDM 681
Query: 403 DEAMKIFADM--KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
++A + M KS G D TY SLI +GK+ E +L++EM EP
Sbjct: 682 EKAFNLQKQMIEKSIG---LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 21/290 (7%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
KQ +KP + YN ++ F E+ + AEK ++M +GV P++ T++ L+
Sbjct: 417 KQGMKPDH--LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG------- 467
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
+ F+K E +DN + + Y + N S A+ K ++ S
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 287 LIKMYGM-------SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+++Y M G + +M G + N+VTYN L+ + + +A+ +
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
E+ + G P+ TY +L+ Y A + +++Y+EMK G Y++L +C
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE 647
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI 449
G + ++F +M +PD Y +++ Y+ G + +A L +MI
Sbjct: 648 G-IELTERLFGEM----SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIK--------MYGMS-------GNYDACLSVYSDMK 308
+ L L KT+++RV F +++ MYG + + L +++ MK
Sbjct: 147 LTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMK 206
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
P++ YN L+ + + KR DA+ +++EM+ P+ TY L+ YC+A E
Sbjct: 207 HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE 266
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
+ V + MK + + +N L G ++A + +MK G PD FT++ L
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSIL 325
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
+ YS K A + + G + N + L++ K + + +I + + G+
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 489 SPDD 492
P++
Sbjct: 386 VPNE 389
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 43/264 (16%)
Query: 193 GRAEKLF---DEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
G+ E F EML++G++ NL+T++TL+ D LS
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLI---------------------------DGLS 575
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+ G + A L + + D +++LI YG +GN C+++Y +MK
Sbjct: 576 MT--------GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G KP + TY+ LL ++ + + ++ EM P+ Y +L Y E
Sbjct: 628 SGIKPTLKTYH-LLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
A ++ K+M EK +DK YN L G E + +M + + +P+ TY ++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR-EMEPEADTYNIIV 742
Query: 430 NMYSCMGKVTEAEALLNEMIRCGF 453
+ + A EM GF
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGF 766
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 115/265 (43%), Gaps = 10/265 (3%)
Query: 162 AFEYFKQKIKPA--RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
AF + K+ +K ++V YN + AE L E+ ++G+KP++ T+++L++
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE-KWR 278
+ + +E+M +P +I + + G + L +R E +
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLK 662
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D + ++ ++ Y + G+ + ++ M + TYN+L+ + + + +++
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+EM P TY +++ +C + A Y+EM+EKG +D + N L
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 399 FGNADEAMKIFADMKSS--GDCQPD 421
+ EA + ++M GD D
Sbjct: 783 EWRSKEAEIVISEMNGRMLGDVTVD 807
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G P+ + LL + + K+ R ++ ++++ F P+ Y +QA +
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
L ++ MK +YN+L D ++A ++F +M + P TY +LI+
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR-RLLPSLITYNTLID 257
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
Y G ++ + M EP+++ +L+ KA +D + ++ DLG P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 491 D 491
D
Sbjct: 318 D 318
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ Y + ++ A KL DEML RG+KP++ T++T++ + +A E
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ CEPD ++ G + L + +EK + V +S LI G
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ +++ MK G P+ +Y+ L+ A R R A E M+ +G P+ Y
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+L C+ ++ AL ++ ++ E G + YN +F G+ A+ + +M S+
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD TY S+I+ G V EA LL +M C F P+++ ++ + KA R +D
Sbjct: 468 G-IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 476 VVKIFNQLLDLGISPDD 492
+ + ++ G P++
Sbjct: 527 AINVLESMVGNGCRPNE 543
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
L + M+++G P++I + L+ T KAV E + F +PD ++I +
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
++ +D A + DR +++ + DTV ++ +I G D L V + + +P ++
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
TY L+ A +A + +EM+ G P+ TY +++ C+ + A + + +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
+ KG + D + YN+L + G +E K+ M S C P+ TY+ LI GK
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCRDGK 348
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ EA LL M G P+ + L+ + + R D ++ ++ G PD
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 9/326 (2%)
Query: 129 VSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQ-KIKPAR-HVVLYNVTLKLF 186
+ EML +GL ++ +I M AFE + ++K V+ YN+ L+
Sbjct: 251 MDEMLSRGLKPDMFTYNTII--RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 187 REIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
+ EKL +M PN++T+S L+ +A+ + M PD
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
+I + R G +D+A+ + ++ D V ++ ++ +G D L ++
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
+ +G PN +YN + A+ + A + EM+ NG P+ TY +++ CR
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNM-LFDMC-AHFGNADEAMKIFADMKSSGDCQPDNFT 424
++A + +M+ V YN+ L C AH ++A+ + M +G C+P+ T
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH--RIEDAINVLESMVGNG-CRPNETT 545
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIR 450
YT LI G EA L N+++R
Sbjct: 546 YTVLIEGIGFAGYRAEAMELANDLVR 571
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 164/391 (41%), Gaps = 75/391 (19%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y L+ + +D+ +A ++ E+ + G K ++ ++ L+ + KA + FE M
Sbjct: 206 YKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMK 262
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
C D+ MI RIG D A+ L++ TE ++ V ++ L+++ D
Sbjct: 263 KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 299 ACLSVYSDMKVLGAKPNMVTYN---NLLYAMGRAKRARDAKTIYEEMVKNG--------- 346
+ V+S M G +PN TY+ NLL A G+ R I + + G
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTL 382
Query: 347 ------------FSPNWP--------TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
F W +Y ++L++ C A + +A+ + ++ EKG D
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 387 VLYNMLFD--------------------------------MCAHFGNA---DEAMKIFAD 411
++YN +F + A FG DEA+ IF +
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
++ S DC+PD +Y SLIN G V EA EM G P+++ ++L+ +GK +
Sbjct: 503 LERS-DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 472 RADDVVKIFNQLLDLGISPD----DRFCDCL 498
R + +F ++L G P+ + DCL
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 172/376 (45%), Gaps = 34/376 (9%)
Query: 148 IVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGV 207
++LD + E A FE K++ R Y + ++ I A LF+EM+ G+
Sbjct: 243 MLLDALAKDEKACQVFEDMKKR-HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD--------------------- 246
N++ ++TL+ + + KA++ F +M C P++
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG 361
Query: 247 -----------NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ + ++ +++G+V A L+ + + + ++ ++++ +G
Sbjct: 362 VVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + S + G + + YN + A+G+ K+ ++E+M K+G SP+ TY
Sbjct: 422 KTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ ++ R ++A+++++E++ D + YN L + G+ DEA F +M+
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD TY++L+ + +V A +L EM+ G +PNI+ L+ K R +
Sbjct: 542 G-LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 476 VVKIFNQLLDLGISPD 491
V +++++ G++PD
Sbjct: 601 AVDLYSKMKQQGLTPD 616
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 16/237 (6%)
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+D S+ M N+ T N L+ G + D + + K N TY
Sbjct: 152 FDRVRSILDSMVKSNVHGNISTVNILIGFFGNTE---DLQMCLRLVKKWDLKMNSFTYKC 208
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
LLQAY R+R A VY E++ G +D YNML D A ++A ++F DMK
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALA---KDEKACQVFEDMKKR- 264
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
C+ D +TYT +I +GK EA L NEMI G N++ +L+ + K K D
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 477 VKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVVRYLTE 533
+++F+++++ G P++ LL + + +L ++ +E +K RY+T+
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLL--VAEGQLVRLDGVVEISK-------RYMTQ 372
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 141/309 (45%), Gaps = 21/309 (6%)
Query: 121 SCNPTEQQVSEMLVKGLGENVTEREAMIV-LDNMVNPETALLAFEYFKQKIKPARHVVLY 179
C P E S +L N+ E +V LD +V ++ Y Q I Y
Sbjct: 335 GCRPNEYTYSLLL------NLLVAEGQLVRLDGVVE-----ISKRYMTQGI--------Y 375
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
+ ++ ++ A +LF +M VK ++ +++ +A+E K+
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
D + ++ ++ + L+++ K + D ++ LI +G G D
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
++++ +++ KP++++YN+L+ +G+ +A ++EM + G +P+ TY+ L++
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
+ + E A S+++EM KG + V YN+L D G EA+ +++ MK G
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG-LT 614
Query: 420 PDNFTYTSL 428
PD+ TYT L
Sbjct: 615 PDSITYTVL 623
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 45/337 (13%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTL----------------- 217
+VV YN +++ + K +A ++F M++ G +PN T+S L
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 218 ---------------VACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNV 262
V S +A F M SF + + + SM+ G
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 263 DMALSLYDRAKTEKWRVDTV----AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
A+ + + + DT+ FSAL K+ +S +D ++ MK G P++ T
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD----LFEKMKKDGPSPDIFT 479
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
YN L+ + GR +A I+EE+ ++ P+ +Y +L+ + ++A +KEM+
Sbjct: 480 YNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
EKG + D V Y+ L + + A +F +M G CQP+ TY L++ G+
Sbjct: 540 EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG-CQPNIVTYNILLDCLEKNGRT 598
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHL----YGKAK 471
EA L ++M + G P+ + T L L +GK++
Sbjct: 599 AEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSR 635
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 255 VYARIGNVDMALSLYDRAK--------TEKW--RVDTVAFSALIKMYGMSGNYDACLSVY 304
V+ I V++ + + + +KW ++++ + L++ Y S +Y VY
Sbjct: 167 VHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY 226
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+++ G K ++ YN LL A+ + ++ A ++E+M K + TY +++ R
Sbjct: 227 CEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRI 283
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
++A+ ++ EM +G ++ V YN L + A D+A+++F+ M +G C+P+ +T
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG-CRPNEYT 342
Query: 425 YTSLINMYSCMGKVTEAEALL 445
Y+ L+N+ G++ + ++
Sbjct: 343 YSLLLNLLVAEGQLVRLDGVV 363
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 9/309 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF EM + +P LI FS L + + ++ ++M + + MI
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
R + +A S + + DTV FS LI + G L + M +G KP
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++T N L+ + + DA + + MV+ GF PN TY +L+ C++ + A+ +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
++M+E+ +D V Y+++ D G+ D A +F +M+ G + D YT+LI +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCY 294
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--- 491
G+ + LL +MI+ P+++A ++L+ + K + + ++ +++ GISPD
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 492 -----DRFC 495
D FC
Sbjct: 355 YTSLIDGFC 363
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 150/340 (44%), Gaps = 3/340 (0%)
Query: 162 AFEYFKQ--KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + F++ + +P ++ ++ + K + L +M +G+ NL T S ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C C A K+ EPD +++I G V AL L DR +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ +AL+ ++G + + M G +PN VTY +L M ++ + A +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+M + + Y+ ++ C+ ++A +++ EM+ KG D ++Y L +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G D+ K+ DM PD +++LI+ + GK+ EAE L EMI+ G P+ +
Sbjct: 296 GRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
TSL+ + K + D + + ++ G P+ R + L+
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 145/319 (45%), Gaps = 5/319 (1%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A L + K+KI P VV ++ + F + AE+L EM+QRG+ P+ +T+++
Sbjct: 300 DGAKLLRDMIKRKITP--DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ + KA + M S C P+ +I Y + +D L L+ +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
DTV ++ LI+ + G + ++ +M +P++V+Y LL + A
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
I+E++ K+ + Y ++ C A +DA ++ + KG D YN++
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
G+ EA +F M+ G P+ TY LI + G T++ L+ E+ RCGF +
Sbjct: 538 CKKGSLSEADLLFRKMEEDGH-SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 457 ILALTSLVHLY--GKAKRA 473
+ +V + G+ K++
Sbjct: 597 ASTVKMVVDMLSDGRLKKS 615
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 165/375 (44%), Gaps = 6/375 (1%)
Query: 122 CNPTEQQVSEMLVKGLGENVTEREAM---IVLDNMVNPETALLAFEYFKQ-KIKPAR-HV 176
C + ++ L++ + E + +A+ I++D + + AF F + +IK + +
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
++Y ++ F + KL +M++R + P+++ FS L+ C +A E ++
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M PD S+I + + +D A + D ++ + F+ LI Y +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
D L ++ M + G + VTYN L+ + AK +++EMV P+ +Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
LL C E AL +++++++ ++D +YN++ + D+A +F + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+PD TY +I G ++EA+ L +M G PN L+ + A
Sbjct: 523 -VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 477 VKIFNQLLDLGISPD 491
K+ ++ G S D
Sbjct: 582 AKLIEEIKRCGFSVD 596
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 143/297 (48%), Gaps = 7/297 (2%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
L D M++ G +PN +T+ ++ A+E KM + + D + +I
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ G++D A +L++ + + ++ D + ++ LI+ + +G +D + DM P++V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
++ L+ + + R+A+ +++EM++ G SP+ TY +L+ +C+ + A + M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
KG + +N+L + D+ +++F M G D TY +LI + +GK
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGK 437
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL------LDLGI 488
+ A+ L EM+ P+I++ L+ + ++IF ++ LD+GI
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 141/318 (44%), Gaps = 36/318 (11%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +L D M++ G KP LIT + LV AV ++M +P++ ++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
V + G +A+ L + + K ++D V +S +I G+ D +++++M++ G K
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+++ Y L+ A R D + +M+K +P+ ++AL+ + + +A ++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
KEM ++G PD TYTSLI+ +
Sbjct: 341 KEMIQRG------------------------------------ISPDTVTYTSLIDGFCK 364
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRF 494
++ +A +L+ M+ G PNI L++ Y KA DD +++F ++ G+ D
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 495 CDCLLYVATQIPRQELGK 512
+ L+ ++ + E+ K
Sbjct: 425 YNTLIQGFCELGKLEVAK 442
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 43/268 (16%)
Query: 132 MLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVV----LYNVTLKLFR 187
M+ KG G N+ R I+++ E F++ R VV YN ++ F
Sbjct: 378 MVSKGCGPNI--RTFNILINGYCKANLIDDGLELFRKM--SLRGVVADTVTYNTLIQGFC 433
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
E+ A++LF EM+ R V+P+++++ L+ P KA+E FEK+ + E D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
+ +I+ VD A W ++ +
Sbjct: 494 IYNIIIHGMCNASKVDDA-----------W------------------------DLFCSL 518
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
+ G KP++ TYN ++ + + +A ++ +M ++G SPN TY L++A+ +
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+ + +E+K G VD M+ DM
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVDM 606
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
DA +++EM ++ P ++ L R + + L + K+M+ KG + +++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
+ C A + G +PD T+++LIN G+V+EA L++ M+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLG-YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+P ++ L +LV+ + D V + +++++ G P++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 144/307 (46%), Gaps = 2/307 (0%)
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
GRA ++ EM + G+ P+ ++++ L+ S A + ++M P ++
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I+ ++ A L + + +D+V ++ LI Y G+ +++ +M G
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+P TY +L+Y + R + R+A ++E++V G P+ L+ +C + A S
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+ KEM + D V YN L G +EA ++ +MK G +PD+ +Y +LI+ Y
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG-IKPDHISYNTLISGY 547
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
S G A + +EM+ GF P +L +L+ K + + ++ ++ GI P+D
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 493 -RFCDCL 498
FC +
Sbjct: 608 SSFCSVI 614
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 4/320 (1%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N L L + A + +M + +K N+ TF+ ++ KA + M
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
F +P +++ ++ G ++ A + K++ ++ D ++ ++ G
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS- 312
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
V +MK +G P+ V+YN L+ A +EMVK G P + TY L+
Sbjct: 313 --EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
E A + +E++EKG +D V YN+L + G+A +A + +M + G Q
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG-IQ 429
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
P FTYTSLI + K EA+ L +++ G +P+++ + +L+ + D +
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Query: 480 FNQLLDLGISPDDRFCDCLL 499
++ + I+PDD +CL+
Sbjct: 490 LKEMDMMSINPDDVTYNCLM 509
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 198 LFDEML---QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
LFDE++ R + I F LV C + +A+E F M P ++
Sbjct: 139 LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT 198
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ +R+ ++ A Y + + + F+ +I + G M+V G KP
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC-RARCSEDALSV 373
+VTYN L+ R A+ I EM GF P+ TY +L C R SE V
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE----V 314
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+EMKE G D V YN+L C++ G+ + A +M G P +TY +LI+
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG-MVPTFYTYNTLIHGLF 373
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
K+ AE L+ E+ G + + L++ Y + A + ++++ GI P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 494 FCDCLLYV 501
L+YV
Sbjct: 434 TYTSLIYV 441
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 150/360 (41%), Gaps = 37/360 (10%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS- 222
+ ++ +IK +V +N+ + + + +A+ M G+KP ++T++TLV S
Sbjct: 215 DMYRMEIKS--NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 223 --------------------------------TCSVPHKAVEWFEKMPSFECEPDDNLSA 250
C+ +A E +M PD
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN-EGRASEVLREMKEIGLVPDSVSYN 331
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
+I + G+++MA + D + ++ LI M +A + +++
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G + VTYN L+ + A+ A +++EM+ +G P TY +L+ CR + +A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+++++ KG D V+ N L D GN D A + +M PD+ TY L+
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM-SINPDDVTYNCLMR 510
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
GK EA L+ EM R G +P+ ++ +L+ Y K + +++L LG +P
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V YN+ + + + D +A L DEM+ G++P T+++L+ + +A E FEK
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
+ +PD + +++ + IGN+D A SL D V ++ L++ G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
++ + +MK G KP+ ++YN L+ + + A + +EM+ GF+P TY A
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 357 LLQAYCRARCSEDALSVYKEMKEKG 381
LL+ + + E A + +EMK +G
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEG 602
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 7/371 (1%)
Query: 99 QLLKKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMI-VLDNMV 154
Q+++ Y + L L N + V+ M+VKG ++ A+I L
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 155 NPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF 214
P+ AL +K K VV+YN + + K A LF++M +G+KP++ T+
Sbjct: 230 EPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR-AK 273
+ L++C A M PD ++I + + G + A LYD K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
++ D VA++ LIK + + + V+ +M G N VTY L++ +A+
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
+A+ ++++MV +G P+ TY LL C E AL V++ M+++ +D V Y +
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
+ G ++ +F + G +P+ TYT++++ + G EA+AL EM G
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 454 EPNILALTSLV 464
PN +L+
Sbjct: 528 LPNSGTYNTLI 538
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 149/324 (45%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
Q + + ++ Y++ + F A + +M++ G P+++T ++L+ +
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+AV ++M +PD ++++ + A++L +R + + D V + A+
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I G D L++ + M+ + ++V YN ++ + + K DA ++ +M G
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P+ TY L+ C DA + +M EK + D V +N L D G EA K
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
++ +M S C PD Y +LI + +V E + EM + G N + T+L+H +
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 468 GKAKRADDVVKIFNQLLDLGISPD 491
+A+ D+ +F Q++ G+ PD
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPD 425
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 154/306 (50%), Gaps = 4/306 (1%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N++ K+ +++K A LF +M++ P+++ FS L++ + + + E+M +
Sbjct: 45 NLSRKVLQDLK-LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
+ + I + R + +AL++ + + V ++L+ +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
+++ M +G +P+ VT+ L++ + + +A +A + E MV G P+ TY A++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 360 AYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
C+ + AL++ +M EKGK + D V+YN + D + + D+A +F M++ G
Sbjct: 224 GLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG-I 281
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+PD FTY LI+ G+ ++A LL++M+ P+++ +L+ + K + + K
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 479 IFNQLL 484
++++++
Sbjct: 342 LYDEMV 347
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 129 VSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARH----VVLYNVTLK 184
+S+ML K + ++ A+I D V E L+ E ++ ++H VV YN +K
Sbjct: 308 LSDMLEKNINPDLVFFNALI--DAFV-KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 185 LFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEP 244
F + K ++F EM QRG+ N +T++TL+ A F++M S P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D ++ GNV+ AL +++ + ++D V ++ +I+ +G + ++
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+ + G KPN+VTY ++ R +A ++ EM ++G PN TY L++A R
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+ + KEM+ G D + ++ +M H G D K F DM S
Sbjct: 545 GDEAASAELIKEMRSCGFAGDASTFGLVTNM-LHDGRLD---KSFLDMLS 590
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 126/269 (46%), Gaps = 4/269 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ-RGVKPNLITFSTLVACAS 222
+ ++ I P +V +N + F + AEKL+DEM++ + P+++ ++TL+
Sbjct: 310 DMLEKNINP--DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
+ +E F +M + ++I+ + + + D A ++ + ++ D +
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
++ L+ +GN + L V+ M+ K ++VTY ++ A+ +A + D ++ +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
G PN TY ++ +CR E+A +++ EMKE G + YN L G+
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ ++ +M+S G D T+ + NM
Sbjct: 548 AASAELIKEMRSCG-FAGDASTFGLVTNM 575
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 9/313 (2%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSA 250
+ G+A LF+ M + G+ P+ + FS +V KA+E++ +M S P L
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVH 419
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
+MI + + + AL +++ + E W + + ++ G DA S M+
Sbjct: 420 TMIQGCLKAESPEAALEIFNDS-FESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQK 478
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G +PN+V YNN++ A R K A++I+ EM++ G PN TY+ L+ + + + ++A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
V +M + ++V+YN + + G +A ++ ++ +Y S+I+
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+ +G A EM G PN++ TSL++ + K+ R D +++ +++ + +
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 491 D--------DRFC 495
D D FC
Sbjct: 659 DLPAYGALIDGFC 671
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 167/376 (44%), Gaps = 39/376 (10%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
++ I+P +VV YN + +K+ A +F EML++G++PN T+S L+
Sbjct: 477 QKGIEP--NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALS-LYDRAKTEKWRVDTVAFS 285
A + +M + E ++ + ++I ++G A L + K +++ + +++
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
++I + G+ D+ + Y +M G PN+VT+ +L+ ++ R A + EM
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
+ P Y AL+ +C+ + A +++ E+ E G + +YN L + G D A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 406 MKIFADMKSSGDCQPDNFTYTS-----------------------------------LIN 430
+ ++ M + G D FTYT+ L+N
Sbjct: 715 IDLYKKMVNDG-ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
S G+ +A +L EM + PN+L ++++ + + ++ ++ +++L+ GI
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 491 DDRFCDCLLYVATQIP 506
DD + L+ + P
Sbjct: 834 DDTVFNLLVSGRVEKP 849
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 7/236 (2%)
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA---CLSVYSDMKVLGAKPN 315
I NV M +L D +K + + AF+ L+ Y + D C + D KV+ P
Sbjct: 148 IPNV-MVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVV---PF 203
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+ NN+L ++ R+ +AK IY +MV G + + T L++A R R E+A+ +++
Sbjct: 204 VPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFR 263
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM 435
+ +G + D +L+++ + A+ + +M+ TYTS+I +
Sbjct: 264 RVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKE 323
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G + EA +++EM+ G +++A TSLV+ Y K + +FN++ + G++PD
Sbjct: 324 GNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 6/340 (1%)
Query: 155 NPETALLAF-EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT 213
+PE AL F + F+ I H + N LF + A M Q+G++PN++
Sbjct: 430 SPEAALEIFNDSFESWIA---HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
++ ++ A F +M EP++ + +I + + + A + ++
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRA 332
+ + V ++ +I G + ++ K + +YN+++ +
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
A Y EM +NG SPN T+ +L+ +C++ + AL + EMK +D Y L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
D + A +F+++ G P+ Y SLI+ + +GK+ A L +M+ G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELG-LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
++ T+++ K + ++++LLDLGI PD+
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 137/300 (45%), Gaps = 5/300 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A++++++M+ GV + +T L+ + P +AV+ F ++ S EPD L + +
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 255 VYARIGNVDMALSLYDRAKTEKWRV--DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ ++ MAL L R K V ++++I + GN + + V +M G
Sbjct: 283 AACKTPDLVMALDLL-REMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI 341
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+++ +L+ + A ++ M + G +P+ ++ +++ +C+ E A+
Sbjct: 342 PMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
Y MK VL + + C + + A++IF D S F + ++
Sbjct: 402 FYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAH--GFMCNKIFLLF 459
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
GKV A + L M + G EPN++ +++ + + K D IF+++L+ G+ P++
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 162 AFEYFKQKIKPARHVVL---YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A E + IK R+ + YN + F ++ D A + + EM + G PN++TF++L+
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
+ + +D+AL + K+ + +
Sbjct: 633 NG-----------------------------------FCKSNRMDLALEMTHEMKSMELK 657
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+D A+ ALI + + +++S++ LG PN+ YN+L+ + A +
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
Y++MV +G S + TY ++ + A +Y E+ + G D++L+ +L + +
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
G +A K+ +MK D P+ Y+++I + G + EA L +EM+ G
Sbjct: 778 KGQFLKASKMLEEMKKK-DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 3/314 (0%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
+P +V ++ L + K++ LF M G+ +L +++ ++ C CS A
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ KM F EPD +S+I + + V A+ L + + +R D V ++ +I
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
G + + ++ M+ G + + VTYN+L+ + + R DA + +MV PN
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIF 409
T+ A++ + + +A+ +Y+EM + D D YN L + +C H G DEA ++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH-GRVDEAKQML 302
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
M + G C PD TY +LIN + +V E L EM + G + + +++ Y +
Sbjct: 303 DLMVTKG-CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 470 AKRADDVVKIFNQL 483
A R D +IF+++
Sbjct: 362 AGRPDAAQEIFSRM 375
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 149/348 (42%), Gaps = 39/348 (11%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + F A + +M++ G +P+++T S+L+ + A++ KM
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA--------------- 283
PD + ++I +IG V+ A+ L+DR + + R D V
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 284 --------------------FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
F+A+I ++ G + + +Y +M P++ TYN+L+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
+ R +AK + + MV G P+ TY L+ +C+++ ++ +++EM ++G
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
D + YN + G D A +IF+ M D +P+ TY+ L+ +V +A
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L M + E +I ++H K +D +F L G+ PD
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 113/210 (53%), Gaps = 1/210 (0%)
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
V FS ++ S NYD +S++ M+V G ++ +YN ++ + R R A ++ +
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M+K G+ P+ T ++L+ +C+ DA+ + +M+E G D V+YN + D G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
++A+++F M+ G + D TY SL+ C G+ ++A L+ +M+ PN++ T
Sbjct: 190 VNDAVELFDRMERDG-VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+++ ++ K + + +K++ ++ + PD
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 5/260 (1%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A L + + I P +V+ + + +F + F A KL++EM +R V P++ T+++
Sbjct: 227 DAARLMRDMVMRDIVP--NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ +A + + M + C PD ++I + + VD L+
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
DT+ ++ +I+ Y +G DA ++S M ++PN+ TY+ LLY + R A
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
++E M K+ + TY ++ C+ EDA +++ + KG D V Y +
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 397 AHFGNADEAMKIFADMKSSG 416
D++ ++ M+ G
Sbjct: 462 CRKRQWDKSDLLYRKMQEDG 481
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV YN + F + K KLF EM QRG+ + IT++T++ P A E F
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M S P+ + ++Y V+ AL L++ + + +D ++ +I G
Sbjct: 374 RMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
N + ++ + G KP++V+Y ++ R ++ + +Y +M ++G P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 173/388 (44%), Gaps = 16/388 (4%)
Query: 173 ARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE 232
A ++ N+ + F A + ++++ G +P+ TF+TL+ +AV
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
++M C+PD S++ R G+ +AL L + + + D +S +I
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G DA +S++ +M+ G K ++VTYN+L+ + +A + D + ++MV PN
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
T+ LL + + ++A +YKEM +G + + YN L D EA + D+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DL 358
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
C PD T+TSLI Y + +V + + + + G N + + LV + ++ +
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 473 ADDVVKIFNQLLDLGISPD--------DRFCDCLLYVATQIPRQELGKITACIEKAKPKL 524
++F +++ G+ PD D CD ++ +I ++K+K L
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCD-------NGKLEKALEIFEDLQKSKMDL 471
Query: 525 GSVVRYLTEEHEGDGDFRKEALELFNSI 552
G V+ E G ++A LF S+
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 38/335 (11%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ ALL + ++I P +V+ +NV L +F + A +L+ EM+ RG+ PN+IT++T
Sbjct: 281 DGALLLKDMVSREIVP--NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ + +A + M +C PD
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPD------------------------------- 367
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
V F++LIK Y M D + V+ ++ G N VTY+ L+ ++ + + A+
Sbjct: 368 ----IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+++EMV +G P+ TY LL C E AL +++++++ D+ V+Y + +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
G ++A +F + G +P+ TYT +I+ G ++EA LL +M G PN
Sbjct: 484 CKGGKVEDAWNLFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+L+ + + K+ ++ G S D
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 149/329 (45%), Gaps = 3/329 (0%)
Query: 162 AFEYFKQKIK--PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A F++ I+ P +V ++ K F ++ G+ N+ T + ++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C C A K+ EPD ++I G V A+ L DR +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D V +++++ SG+ L + M+ K ++ TY+ ++ ++ R A +++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+EM G + TY +L++ C+A D + K+M + + + +N+L D+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G EA +++ +M + G P+ TY +L++ Y +++EA +L+ M+R P+I+
Sbjct: 312 GKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
TSL+ Y KR DD +K+F + G+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 161/385 (41%), Gaps = 73/385 (18%)
Query: 179 YNVTLK-LFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+N +K LF E K A L D M++ G +P+++T++++V A++ KM
Sbjct: 161 FNTLIKGLFLEGK-VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ D +++I R G +D A+SL+ +T+ + V +++L++ +G +
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ + DM PN++T+N LL + + ++A +Y+EM+ G SPN TY L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 358 LQAYC----------------RARCS-------------------EDALSVYKEMKEKGK 382
+ YC R +CS +D + V++ + ++G
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN------------ 430
+ V Y++L G A ++F +M S G PD TY L++
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 431 ----------------MYSCM-------GKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
MY+ + GKV +A L + G +PN++ T ++
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 468 GKAKRADDVVKIFNQLLDLGISPDD 492
K + + ++ + G +P+D
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPND 543
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 6/268 (2%)
Query: 131 EMLVKGLGENVTEREAMI---VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
EM+ +G+ N+ ++ + N ++ +L + K P +V + +K +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL-MVRNKCSP--DIVTFTSLIKGYC 379
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+K K+F + +RG+ N +T+S LV A E F++M S PD
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
++ G ++ AL +++ + K + V ++ +I+ G + +++ +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
G KPN++TY ++ + + +A + +M ++G +PN TY L++A+ R
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+ + +EMK G D M+ DM
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 111/273 (40%), Gaps = 40/273 (14%)
Query: 258 RIGNVDM----ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
R G VD+ A++L+ + V FS + ++ L +++ G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP--------------------- 352
N+ T N ++ R + A ++ +++K G+ P+
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 353 --------------TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
TY +++ CR+ + AL + ++M+E+ D Y+ + D
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G D A+ +F +M++ G + TY SL+ GK + LL +M+ PN++
Sbjct: 241 DGCIDAAISLFKEMETKG-IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L+ ++ K + + +++ +++ GISP+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 167/382 (43%), Gaps = 26/382 (6%)
Query: 133 LVKGLGENVTEREAMIVLDNMV----NPETAL---------------LAFEYFKQ----K 169
L+ GL + EAM ++D MV P+ LAF + K
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
++P V++YN + + K A LF EM +G++PN++T+S+L++C
Sbjct: 252 LEPG--VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
A M + PD +++I + + G + A LYD V +S+LI
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
+ M D ++ M P++VTYN L+ + KR + ++ EM + G
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
N TY L+Q +A + A ++KEM G + + YN L D G ++AM +F
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
++ S +P +TY +I GKV + L + G +P+++A +++ + +
Sbjct: 490 EYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 470 AKRADDVVKIFNQLLDLGISPD 491
++ +F ++ + G P+
Sbjct: 549 KGSKEEADALFKEMKEDGTLPN 570
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 148/303 (48%), Gaps = 3/303 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A L D+M G +PN +TF+TL+ + +A+ ++M + C+PD
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
++ + G+ D+A +L ++ + K + ++ +I + D L+++ +M+
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN+VTY++L+ + R DA + +M++ +P+ T++AL+ A+ + +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A +Y EM ++ D V Y+ L + C H DEA ++F M S C PD TY +L
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMH-DRLDEAKQMFEFMVSK-HCFPDVVTYNTL 402
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I + +V E + EM + G N + L+ +A D +IF +++ G+
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 489 SPD 491
P+
Sbjct: 463 PPN 465
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 154/323 (47%), Gaps = 1/323 (0%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K +P ++ ++ L ++ F L ++M G+ N T+S L+ C S
Sbjct: 74 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ KM EP+ +S++ Y + A++L D+ ++ +TV F+ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ +++ M G +P++VTY ++ + + A + +M +
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P Y ++ C+ + +DAL+++KEM+ KG + V Y+ L ++G +A ++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+DM PD FT+++LI+ + GK+ EAE L +EM++ +P+I+ +SL++ +
Sbjct: 314 LSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 469 KAKRADDVVKIFNQLLDLGISPD 491
R D+ ++F ++ PD
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPD 395
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF EM++ P++I FS L++ + + + E+M + + + +I
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R + +AL++ + + + V S+L+ Y S +++ M V G +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N VT+N L++ + +A +A + + MV G P+ TY ++ C+ ++ A ++
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+M++ + ++YN + D + + D+A+ +F +M++ G +P+ TY+SLI+
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCN 303
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
G+ ++A LL++MI P++ ++L+ + K + + K++++++ I P
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 131 EMLVKGLGENVTEREAMI-VLDNMVN-PETALLAFEYFKQKIKPARHVVLYNVTLKLFRE 188
EM KG+ NV ++I L N + + L + ++KI P V ++ + F +
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP--DVFTFSALIDAFVK 338
Query: 189 IKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNL 248
AEKL+DEM++R + P+++T+S+L+ +A + FE M S C PD
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
++I + + V+ + ++ +TV ++ LI+ +G+ D ++ +M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN----------------------- 345
G PN++TYN LL + + + A ++E + ++
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 346 ------------GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
G P+ Y ++ +CR E+A +++KEMKE G + YN L
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 394 DMCAHFGNADEAMKIFADMKSSG 416
G+ + + ++ +M+S G
Sbjct: 579 RARLRDGDREASAELIKEMRSCG 601
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
+D A++L+ + + FS L+ +D +S+ M+ LG N TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
L+ R + A + +M+K G+ PN T ++LL YC ++ +A+++ +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+ V +N L A EAM + M + G CQPD TY ++N G A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
LLN+M + EP +L +++ K K DD + +F ++ GI P+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ V YN+ ++ + D A+++F EM+ GV PN++T++TL+ KA+ F
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
E + + EP MI + G V+ L+ + + D VA++ +I +
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G+ + +++ +MK G PN YN L+ A R + + +EM GF+ + T
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 1/316 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V + + F + F A L D+++ G +PN++ ++T++ + A++ +
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M PD S+I G ++ + D + FSALI +YG G
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
Y++M PN+VTYN+L+ + +AK + +V GF PN TY
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ YC+A+ +D + + M G D D YN L+ G A K+ M S
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD +T+ L++ GK+ +A L ++ + I+ ++ KA + +D
Sbjct: 389 G-VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 476 VVKIFNQLLDLGISPD 491
+F L G+SPD
Sbjct: 448 AWYLFCSLALKGVSPD 463
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 160/362 (44%), Gaps = 33/362 (9%)
Query: 166 FKQKIKPARHVVLYNVTLKLFRE---------IKDFGR-------------AEKLFDEML 203
++++++ H + +N L LF + I DF R LF +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 204 QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVD 263
G+ +L +F+TL+ C C+ A+ KM EP S++ + +
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
A+SL D+ + + V ++ +I G + L V MK +G +P++VTYN+L+
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
+ + + I +M++ G SP+ T++AL+ Y + +A Y EM ++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 384 VDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
+ V YN L + +C H G DEA K+ + S G P+ TY +LIN Y +V +
Sbjct: 287 PNIVTYNSLINGLCIH-GLLDEAKKVLNVLVSKG-FFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--------DRF 494
+L M R G + + +L Y +A + K+ +++ G+ PD D
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Query: 495 CD 496
CD
Sbjct: 405 CD 406
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 121/291 (41%), Gaps = 3/291 (1%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV+YN + E A + M + G++P+++T+++L+ +
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
M PD +++I VY + G + A Y+ + V +++LI +
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G D V + + G PN VTYN L+ +AKR D I M ++G + TY
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMK 413
L Q YC+A A V M G D +N+L D +C H G +A+ D++
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH-GKIGKALVRLEDLQ 421
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
S TY +I KV +A L + G P+++ +++
Sbjct: 422 KS-KTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 150/323 (46%), Gaps = 1/323 (0%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
+ +P + ++ L ++K + L+++M G+ NL T + L+ C CS
Sbjct: 74 QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS 133
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+ + KM EP S++ + R V AL ++D+ ++ + V ++ +I
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
S D L + + M+ G P++VTYN+L+ + + R DA + M K
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P+ T+ AL+ A + +A Y+EM + D D V Y++L + DEA ++
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
F M S G C PD TY+ LIN Y KV L EM + G N + T L+ Y
Sbjct: 314 FGFMVSKG-CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 469 KAKRADDVVKIFNQLLDLGISPD 491
+A + + +IF +++ G+ P+
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPN 395
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 3/319 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV+YN + + K A L + M + G+ P+++T+++L++ + A
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
M E PD ++I + G V A Y+ D V +S LI M
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
D ++ M G P++VTY+ L+ ++K+ ++ EM + G N TY
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+Q YCRA A +++ M G + + YN+L G ++A+ I ADM+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS-LVHLYGKAKRA 473
+G D TY +I G+V +A + + G P+I T+ ++ LY K R
Sbjct: 425 NG-MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 474 DDVVKIFNQLLDLGISPDD 492
+ +F ++ + GI P++
Sbjct: 484 -EADALFRKMKEDGILPNE 501
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+NV L L G A + F M+QRG +P++++++ L+ AVE + M
Sbjct: 117 FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLY-DRAKTEKWRVDTVAFSALIKMYGMSGNY 297
PD+ A+++ VD+A + + K+ + ++ TV ++ALI + +G
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ ++ S M +G +P++VTYN LL + A+ + EMV++G + +Y L
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
Query: 358 LQAYCRARCSEDALS-VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ +CR + + + KEM+ +G D V Y+ L + N +A ++F +M+ G
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+ TYTSLI + G + A+ LL++M G P+ + T+++ K+ D
Sbjct: 356 MVM-NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 477 VKIFNQLLDLGISPD 491
+FN +++ I+PD
Sbjct: 415 YGVFNDMIEHEITPD 429
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 4/296 (1%)
Query: 161 LAFEYFKQKIKPAR---HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTL 217
LA+E ++IK AR V+YN + F + +AE L M + G +P+L+T++ L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 218 VACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW 277
+ ++ +A +M + D ++ + R+ + D + + +
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 278 RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
D V++S LI+ + + N ++ +M+ G N+VTY +L+ A R + AK
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
+ ++M + G SP+ Y +L C++ + A V+ +M E D + YN L
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
G EA+K+F DMK +C PD T+ +I K++ A + ++M+ GF
Sbjct: 442 RSGRVTEAIKLFEDMKGK-ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 92/187 (49%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y+ ++ F + +A +LF+EM Q+G+ N++T+++L+ A + +
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M PD +++ + GNVD A +++ + D +++++LI SG
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ ++ DMK P+ +T+ ++ + R K+ A ++++M+ GF+ +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 356 ALLQAYC 362
L++A C
Sbjct: 505 TLIKASC 511
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 49/288 (17%)
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG--MSG-----NYDACLSVYSDMK 308
Y R V + S ++ A+ W + + FS + Y +SG +D ++ SDM+
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 309 VL-----------------------------------GAKPNMVTYNNLLYAMGRAKRAR 333
L G +P++V+Y L+ + RA +
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS-VYKEMKEKGKDVDKVLYNML 392
DA I+ M+++G SP+ AAL+ C AR + A V +E+K + V+YN L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
G ++A + + M G C+PD TY L+N Y + AE ++ EM+R G
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIG-CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+ + + L+ + + D K +N ++ + P FCD + Y
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPD---KCYNFMVK-EMEPRG-FCDVVSY 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 35/260 (13%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPN----------- 210
A + + KI +V YNV L + + RAE + EM++ G++ +
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 211 ------------------------LITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
++++STL+ S KA FE+M +
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
S+I + R GN +A L D+ D + ++ ++ SGN D V++D
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
M P+ ++YN+L+ + R+ R +A ++E+M P+ T+ ++ R +
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 367 SEDALSVYKEMKEKGKDVDK 386
A V+ +M +KG +D+
Sbjct: 481 LSAAYKVWDQMMDKGFTLDR 500
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 43/271 (15%)
Query: 260 GNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY 319
G +D A+ ++D + +RV + ++ I + ++ ++Y DMK +G TY
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 320 NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
+ + + + K+ + +M GF P+ + L CR A+ + M +
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN----------------- 422
+G++ D V Y +L + G +A++I+ M SG PDN
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG-VSPDNKACAALVVGLCHARKVD 201
Query: 423 -------------------FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
Y +LI+ + G++ +AEAL + M + G EP+++ L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 464 VHLY---GKAKRADDVVKIFNQLLDLGISPD 491
++ Y KRA+ V+ +++ GI D
Sbjct: 262 LNYYYDNNMLKRAEGVMA---EMVRSGIQLD 289
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
SG D + V+ +M+ + YN + + R R A+ IY +M GFS T
Sbjct: 22 SGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFT 81
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
Y+ + C+ + + ++ +M+ G D +N+ D+ A++ F M
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
G +PD +YT LIN GKVT+A + N MIR G P+ A +LV A++
Sbjct: 142 QRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 474 D 474
D
Sbjct: 201 D 201
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 165/363 (45%), Gaps = 11/363 (3%)
Query: 162 AFEYFK--QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A EY++ +K+ V + L + + K E + EM + ++ + + ++
Sbjct: 394 ALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQ 453
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGN-VDMALSLYDRAKTEKWR 278
+ +A FE+ +C A++I VYA G V+ Y + R
Sbjct: 454 MYVNEGLVVQAKALFERF-QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR 512
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D + ++ +IK YG + ++ LS++ MK G P+ TYN+L + +A+ I
Sbjct: 513 NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRI 572
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
EM+ +G P TYAA++ +Y R DA+ +Y+ M++ G ++V+Y L + A
Sbjct: 573 LAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G +EA++ F M+ G Q ++ TSLI YS +G + EA + ++M P++
Sbjct: 633 SGMVEEAIQYFRMMEEHG-VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIE 518
A S++ L + IFN L + G CD + + + +G + IE
Sbjct: 692 ASNSMLSLCADLGIVSEAESIFNALREKGT------CDVISFATMMYLYKGMGMLDEAIE 745
Query: 519 KAK 521
A+
Sbjct: 746 VAE 748
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 168/386 (43%), Gaps = 46/386 (11%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
KP R +N + L+ + A LF EML+ GV + +TF+T++ T +A
Sbjct: 301 KP-RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+KM PD ++ ++A G+++ AL Y + + DTV A++ +
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPN-------MVTY-NNLLYAMGRAKRAR--------- 333
+V ++M + + M Y N L +A R
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 334 -----------------DAKTI-YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+A+T+ Y + +G + Y +++AY +A+ E ALS++K
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM 435
MK +G D+ YN LF M A DEA +I A+M SG C+P TY ++I Y +
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG-CKPGCKTYAAMIASYVRL 598
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC 495
G +++A L M + G +PN + SL++ + ++ ++ ++ F + + G+ +
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 496 DCLLYVATQIPRQELGKITACIEKAK 521
L+ +++ C+E+A+
Sbjct: 659 TSLIKAYSKV---------GCLEEAR 675
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 176/416 (42%), Gaps = 21/416 (5%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMI-------VLDNMVNPETAL 160
T + L ++ +D + ++ ++EML G AMI +L + V+ A+
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
K +KP + V+Y + F E A + F M + GV+ N I ++L+
Sbjct: 612 E-----KTGVKP--NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKA 664
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD 280
S +A ++KM E PD S SM+ + A +G V A S+++ A EK D
Sbjct: 665 YSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFN-ALREKGTCD 723
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
++F+ ++ +Y G D + V +M+ G + ++N ++ + + ++
Sbjct: 724 VISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFH 783
Query: 341 EM-VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK-VLYNMLFDMCAH 398
EM V+ +W T+ L + +A+S + + K + + LF
Sbjct: 784 EMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGL 843
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
+ A E+ + +SG+ ++F Y ++I YS G + A M G EP+I+
Sbjct: 844 YAYALESCQEL----TSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIV 899
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKIT 514
LV +YGKA + V ++ ++L + P + RQ+L +
Sbjct: 900 TQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVV 955
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 179/451 (39%), Gaps = 48/451 (10%)
Query: 42 LYFPTSHNLFPLT-----QSKTHFSLQPLNSQLDAKLDNPDAKSPPSSKSRIWVNPRSPR 96
L + +FPL+ S+ F LQ + + +P S P+ SR
Sbjct: 28 LALSSKARVFPLSLPCNFSSRVSFKLQLHCAASSSSSVSPPRCSKPNPSSR--------- 78
Query: 97 AKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNP 156
K+ Y + + +SLDS E ++ + + N++ +E ++L
Sbjct: 79 -----KRKYGGV---IPSILRSLDSSTDIETTLASLCL-----NLSPKEQTVLLKEQTRW 125
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E L F +F+ +V+ YN+ L+ + + EM GV P T+
Sbjct: 126 ERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGM 185
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
LV + +A+ W + M PD+ A+++ V+ G D A + K
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 277 WRVDT---------------VAFSALIKM----YGMSGNYDACLSVYSDMKVLGAKPNMV 317
+D V + M G + L S KP +
Sbjct: 246 VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLT 305
Query: 318 -TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
T+N L+ G+A R DA ++ EM+K+G + T+ ++ +A S+ K+
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M+EKG D YN+L + A G+ + A++ + ++ G PD T+ +++++
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG-LFPDTVTHRAVLHILCQRK 424
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
V E EA++ EM R + ++ ++ +Y
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 59/259 (22%)
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
PN++ YN +L A+GRA + + + + EM NG P TY L+ Y +A ++AL
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA---------------DMKSSGDC 418
K M ++ D+V + + + G D A + F D +G
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 419 Q-PDNF--------------------------------------TYTSLINMYSCMGKVT 439
Q P N T+ +LI++Y G++
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+A L +EM++ G + + +++H G + + ++ + GISPD + + LL
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 500 YVATQIPRQELGKITACIE 518
+ + G I A +E
Sbjct: 383 SL-----HADAGDIEAALE 396
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 197 KLFDEML-QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYV 255
+LF EML +R + + TF TL VP +AV + + E +P A +
Sbjct: 780 ELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN-EAKPLAT-PAITATL 837
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
++ +G AL + + + A++A+I Y SG+ D L Y M+ G +P+
Sbjct: 838 FSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPD 897
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+VT L+ G+A K ++ + P+ + A+ AY A + A V K
Sbjct: 898 IVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKK 957
Query: 376 EM 377
EM
Sbjct: 958 EM 959
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +L D M++ G KP+LIT +TLV +A+ +KM + C+P+ ++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
V + G +A+ L + + ++D V +S +I G+ D +++++M++ G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N++TYN L+ A R D + +M+K +PN T++ L+ ++ + +A ++
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
KEM +G D + Y L D + D+A ++ M S G C P+ T+ LIN Y
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG-CDPNIRTFNILINGYCK 415
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--- 491
++ + L +M G + + +L+ + + + + ++F +++ + P+
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 492 -----DRFCD 496
D CD
Sbjct: 476 YKILLDGLCD 485
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 13/330 (3%)
Query: 130 SEMLVKGLGENVTEREAMIVLDNMVNP----ETALLAFEYFKQKIKPARHVVLYNVTLKL 185
+EM +KG+ N+ I++ N + A L + K+KI P +VV ++V +
Sbjct: 287 NEMEMKGITTNIITYN--ILIGGFCNAGRWDDGAKLLRDMIKRKINP--NVVTFSVLIDS 342
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH--KAVEWFEKMPSFECE 243
F + AE+L EM+ RG+ P+ IT+++L+ C H KA + + M S C+
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLID--GFCKENHLDKANQMVDLMVSKGCD 400
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
P+ +I Y + +D L L+ + DTV ++ LI+ + G + +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ +M PN+VTY LL + + A I+E++ K+ + Y ++ C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
A +DA ++ + KG YN++ G EA +F M+ G PD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH-APDGW 579
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
TY LI + G T++ L+ E+ RCGF
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 167/375 (44%), Gaps = 6/375 (1%)
Query: 122 CNPTEQQVSEMLVKGLGENVTEREAM---IVLDNMVNPETALLAFEYFKQ-KIKP-ARHV 176
C + ++ L++ + E + +A+ I++D + + AF F + ++K ++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
+ YN+ + F + KL +M++R + PN++TFS L+ +A E ++
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M PD S+I + + ++D A + D ++ + F+ LI Y +
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
D L ++ M + G + VTYN L+ + AK +++EMV PN TY
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
LL C SE AL +++++++ ++D +YN++ + D+A +F + G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+P TY +I G ++EAE L +M G P+ L+ + A
Sbjct: 539 -VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 477 VKIFNQLLDLGISPD 491
VK+ +L G S D
Sbjct: 598 VKLIEELKRCGFSVD 612
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 10/337 (2%)
Query: 162 AFEYFKQKI--KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + F+ I +P V+ ++ + K + L +M +G+ NL T S ++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C C A K+ EP+ +++I G V AL L DR +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + + L+ +SG + + M G +PN VTY +L M ++ + A +
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+M + + Y+ ++ C+ ++A +++ EM+ KG + + YN+L +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G D+ K+ DM P+ T++ LI+ + GK+ EAE L EMI G P+ +
Sbjct: 312 GRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCD 496
TSL+ + K D NQ++DL +S + CD
Sbjct: 371 YTSLIDGFCKENHLDKA----NQMVDLMVS---KGCD 400
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 103/217 (47%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+N+ + + + +LF +M RGV + +T++TL+ + A E F++M
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
S + P+ ++ G + AL ++++ + K +D ++ +I + D
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++ + + G KP + TYN ++ + + +A+ ++ +M ++G +P+ TY L+
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+A+ + ++ + +E+K G VD M+ DM
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 622
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 136/274 (49%), Gaps = 5/274 (1%)
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
+ ++ +W EK +E MI A+I + L + + +K ++ F
Sbjct: 116 LTYRFFQWSEKQRHYE--HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFC 172
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
+++ Y + D + ++ M+ PN+V +N LL A+ ++K R A+ ++E M ++
Sbjct: 173 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RD 231
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
F+P+ TY+ LL+ + + A V++EM + G D V Y+++ D+ G DEA
Sbjct: 232 RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA 291
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ I M S C+P F Y+ L++ Y ++ EA EM R G + ++ SL+
Sbjct: 292 LGIVRSMDPSI-CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIG 350
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ KA R +V ++ ++ G++P+ + C+ +L
Sbjct: 351 AFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 137/308 (44%), Gaps = 9/308 (2%)
Query: 189 IKDFGRAEKL------FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
++ + RA+K+ F+ M + + PNL+ F+ L++ KA E FE M
Sbjct: 175 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RF 233
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS 302
PD + ++ + + N+ A ++ D V +S ++ + +G D L
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
+ M KP Y+ L++ G R +A + EM ++G + + +L+ A+C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
+A ++ V KEMK KG + N++ G DEA +F M C+PD
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDA 411
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
TYT +I M+ ++ A+ + M + G P++ + L++ + + + +
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 483 LLDLGISP 490
++++GI P
Sbjct: 472 MIEMGIRP 479
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 9/341 (2%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A+ AF ++ P ++V +N L + K+ +A+++F+ M R P+ T+S
Sbjct: 185 DEAIYAFNVMEKYDLPP-NLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSI 242
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ KA E F +M C PD + M+ + + G VD AL +
Sbjct: 243 LLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ T +S L+ YG + + + +M+ G K ++ +N+L+ A +A R ++
Sbjct: 303 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVY 362
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +EM G +PN + +L+ ++A V+++M K + D Y M+ M
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMF 421
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE-AEALLNEMIRCGFEP 455
+ A K++ M+ G P T++ LIN C + T+ A LL EMI G P
Sbjct: 422 CEKKEMETADKVWKYMRKKG-VFPSMHTFSVLINGL-CEERTTQKACVLLEEMIEMGIRP 479
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCD 496
+ + L L K +R +DV+K N+ +++ + ++ CD
Sbjct: 480 SGVTFGRLRQLLIKEER-EDVLKFLNEKMNVLV--NEPLCD 517
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 4/347 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E K+ + P H Y++ + + + A + EM V+PN FS L+A
Sbjct: 364 EMEKRGVSPDEHT--YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
K + ++M S +PD +I + + +D A++ +DR +E D V
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT 481
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI + G + ++ M+ G P TYN ++ + G +R D K + +M
Sbjct: 482 WNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMK 541
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
G PN T+ L+ Y ++ DA+ +EMK G +YN L + A G ++
Sbjct: 542 SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
+A+ F M S G +P SLIN + + EA A+L M G +P+++ T+L
Sbjct: 602 QAVNAFRVMTSDG-LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQEL 510
+ + + V ++ +++ G P DR +L A + +Q L
Sbjct: 661 MKALIRVDKFQKVPVVYEEMIMSGCKP-DRKARSMLRSALRYMKQTL 706
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 147/362 (40%), Gaps = 42/362 (11%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
KQ + P + YN + D +A L +M Q G + + + +S ++ + +
Sbjct: 192 KQTLTP----LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247
Query: 227 PHKA--VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
+ ++++ + E D L +I +A+ G+ AL L A+ T
Sbjct: 248 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATL 307
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
++I SG +++ +++ G KP YN LL + +DA+++ EM K
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDA---------------------------------- 370
G SP+ TY+ L+ AY A E A
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 371 -LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
V KEMK G D+ YN++ D F D AM F M S G +PD T+ +LI
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLI 486
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
+ + G+ AE + M R G P +++ YG +R DD+ ++ ++ GI
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 490 PD 491
P+
Sbjct: 547 PN 548
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 162/371 (43%), Gaps = 21/371 (5%)
Query: 90 VNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIV 149
+ PR+ RA L K Y T PL+ E VSEM +G+ + E ++
Sbjct: 335 IKPRT-RAYNALLKGYVKTG-PLKD----------AESMVSEMEKRGVSPD--EHTYSLL 380
Query: 150 LDNMVNP---ETALLAF-EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQR 205
+D VN E+A + E ++P V ++ L FR+ ++ + ++ EM
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFV--FSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 206 GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMA 265
GVKP+ ++ ++ + A+ F++M S EPD ++I + + G +A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
+++ + ++ +I YG +D + MK G PN+VT+ L+
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
G++ R DA EEM G P+ Y AL+ AY + SE A++ ++ M G
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+ N L + EA + MK +G +PD TYT+L+ + K + +
Sbjct: 619 LLALNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 446 NEMIRCGFEPN 456
EMI G +P+
Sbjct: 678 EEMIMSGCKPD 688
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA--LSVY 374
+TYN L+ A R A + +M ++G+ ++ Y+ ++Q+ R+ + L +Y
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
KE++ ++D L N + A G+ +A+++ +++G T S+I+ +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATG-LSAKTATLVSIISALAD 316
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRF 494
G+ EAEAL E+ + G +P A +L+ Y K D + +++ G+SPD+
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 495 CDCLLYVATQIPRQELGKIT 514
L+ R E +I
Sbjct: 377 YSLLIDAYVNAGRWESARIV 396
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 42/338 (12%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +L +L G PN++TF TL+ +A + F+ M EPD +++I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y + G + M L+ +A + ++D V FS+ I +Y SG+ VY M G P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+VTY L+ + + R +A +Y +++K G P+ TY++L+ +C+ ++Y
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFG---------------------------------- 400
++M + G D V+Y +L D + G
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 401 -NADEAMKIFADMKSSGDCQPDNFTYTSLINM------YSCMGKVTEAEALLNEMIRCGF 453
DEA+K+F M G +PD T+T+++ + + K T L + M R
Sbjct: 510 NRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+I ++HL K R +D K FN L++ + PD
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 154/332 (46%), Gaps = 11/332 (3%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV+++ T+ ++ + D A ++ ML +G+ PN++T++ L+ ++A +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
++ EP +S+I + + GN+ +LY+ + D V + L+ G+S
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--GLSK 473
Query: 296 NYDACLSVYSDMKVLGA--KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
++ +K+LG + N+V +N+L+ R R +A ++ M G P+ T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 354 YAALLQ------AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
+ +++ A+C+ L ++ M+ D + N++ + ++A K
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
F ++ G +PD TY ++I Y + ++ EAE + + F PN + LT L+H+
Sbjct: 594 FFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 468 GKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
K D +++F+ + + G P+ CL+
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 155/365 (42%), Gaps = 44/365 (12%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
Q I P +VV Y + +K + A ++ ++L+RG++P+++T+S+L+ C
Sbjct: 385 QGISP--NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+E M PD + ++ ++ G + A+ + + R++ V F++L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY---------------------------- 319
I + +D L V+ M + G KP++ T+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 320 -------------NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
N +++ + + R DA + +++ P+ TY ++ YC R
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
++A +++ +K + V +L + + D A+++F+ M G +P+ TY
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYG 681
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
L++ +S + + L EM G P+I++ + ++ K R D+ IF+Q +D
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 487 GISPD 491
+ PD
Sbjct: 742 KLLPD 746
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 7/295 (2%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA----STCS--VPH 228
+VV++N + + + F A K+F M G+KP++ TF+T++ + + C P
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
++ F+ M + D + +I++ + ++ A ++ K D V ++ +I
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
Y D ++ +KV PN VT L++ + + A ++ M + G
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
PN TY L+ + ++ E + +++EM+EKG V Y+++ D G DEA I
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
F + PD Y LI Y +G++ EA L M+R G +P+ L +L
Sbjct: 735 FHQAIDA-KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 162/371 (43%), Gaps = 11/371 (2%)
Query: 130 SEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPAR--HVVLYNVTLKLFR 187
++L +G+ ++ ++I D F ++ IK VV+Y V +
Sbjct: 415 GQILKRGMEPSIVTYSSLI--DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+ A + +ML + ++ N++ F++L+ + +A++ F M + +PD
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 248 LSASMIYV------YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
+++ V + + + L L+D + K D + +I + +
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
++++ +P++VTYN ++ +R +A+ I+E + F PN T L+
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
C+ + A+ ++ M EKG + V Y L D + + + + K+F +M+ G P
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG-ISPS 711
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFN 481
+Y+ +I+ G+V EA + ++ I P+++A L+ Y K R + ++
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
Query: 482 QLLDLGISPDD 492
+L G+ PDD
Sbjct: 772 HMLRNGVKPDD 782
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 154 VNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT 213
+ P L F+ Q+ K + + + NV + L + A K F+ +++ ++P+++T
Sbjct: 551 MKPTIGLQLFD-LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
++T++ + +A FE + P+ +I+V + ++D A+ ++
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
+ + + V + L+ + S + + ++ +M+ G P++V+Y+ ++ + + R
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCR-ARCSEDALSVYKEMKEKGKDVDKVLYNML 392
+A I+ + + P+ YA L++ YC+ R E AL +Y+ M G D +L L
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL-LYEHMLRNGVKPDDLLQRAL 788
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 168/385 (43%), Gaps = 26/385 (6%)
Query: 131 EMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPA-RHVVLYNVTLKLFRE- 188
++V G+ + + +V N++ A AF +++K++ H + + LF E
Sbjct: 3 RLIVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEM 62
Query: 189 --------IKDFGR-------------AEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
I DF R +M G+ +L +F+ L+ C CS
Sbjct: 63 VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
A+ KM EP S+++ + + + A SL + + V ++ L
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I +G + L + ++M+ G ++VTYN LL + + R DA + +M+K
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAM 406
+P+ T+ AL+ + + ++A +YKEM + D + V YN + + +C H G +A
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH-GRLYDAK 301
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
K F D+ +S C P+ TY +LI+ + V E L M GF +I +L+H
Sbjct: 302 KTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 467 YGKAKRADDVVKIFNQLLDLGISPD 491
Y + + + IF ++ ++PD
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 4/336 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V + L F + G A L M++ G +PN++ ++TL+ + A+E
Sbjct: 141 IVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 236 KMPSFECEPDDNLSASMIYVYARIGN-VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M D +++ G D A L D K D V F+ALI ++
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPDVVTFTALIDVFVKQ 259
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
GN D +Y +M PN VTYN+++ + R DAK ++ M G PN TY
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ +C+ R ++ + +++ M +G + D YN L G A+ IF M S
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
PD T+ L++ G++ A ++M I+A ++H KA + +
Sbjct: 380 R-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 475 DVVKIFNQLLDLGISPDDR-FCDCLLYVATQIPRQE 509
++F +L G+ PD R + +L + PR+E
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
V F+ L+ Y+ + M++ G ++ ++ L++ R R A ++ +
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGK 131
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M+K G+ P+ T+ +LL +C DA S+ M + G + + V+YN L D G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
+ A+++ +M+ G D TY +L+ G+ ++A +L +M++ P+++ T
Sbjct: 192 LNIALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+L+ ++ K D+ +++ +++ + P++
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 38/310 (12%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV+YN + + + A +L +EM ++G+ +++T++TL+ A
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
M PD ++I V+ + GN+D A LY + V ++++I M
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 295 GN-YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G YDA + M G PN+VTYN L+ + + + +++ M GF+ + T
Sbjct: 295 GRLYDA-KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 354 YAALLQAYCRA------------------------RC-----------SEDALSVYKEMK 378
Y L+ YC+ C E AL + +M+
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
E K + V YN++ ++A ++F + G +PD TYT +I G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG-VKPDARTYTIMILGLCKNGPR 472
Query: 439 TEAEALLNEM 448
EA+ L+ M
Sbjct: 473 READELIRRM 482
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 91/187 (48%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A+K FD M +G PN++T++TL++ + + ++ F++M D ++I+
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y ++G + +AL ++ + + D + L+ ++G ++ L + DM+
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+V YN +++ + +A + A ++ + G P+ TY ++ C+ +A +
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Query: 375 KEMKEKG 381
+ MKE+G
Sbjct: 480 RRMKEEG 486
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 192 FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS 251
+ + EKL DEM G+KPN+ ++ + + +A + FE M P+ ++
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
MI Y + GNV A LY + + V F L+ + + S++ M G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
PN+ YN L++ ++ +A + EM SP+ TY L+ C +A
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
++++MK + YN L N ++A+ + ++M +SG +P+ T+++LI+
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG-VEPNIITFSTLIDG 453
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
Y + + A L EM G P+++ T+L+ + K + +++++ +L+ GI P+
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 492 DRFCDCLL 499
D CL+
Sbjct: 514 DHTFACLV 521
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 163/380 (42%), Gaps = 10/380 (2%)
Query: 119 LDSCNPTEQQVSEMLVK-----GLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPA 173
LD C + + +E + + G+ N+ AMI D A+ +K+ +
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI--DGYCKTGNVRQAYGLYKEILVAE 299
Query: 174 R--HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
+VV++ + F + ++ A LF M++ GV PNL ++ L+ +AV
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+M S PD +I V A L+ + K E+ + +++LI Y
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
N + L + S+M G +PN++T++ L+ + + A +Y EM G P+
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
TY AL+ A+ + ++AL +Y +M E G + + L D G A+ + +
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
C ++ +T LI G + A ++M CG P+I + S++ + + K
Sbjct: 540 NNQQRSCW-NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 472 RADDVVKIFNQLLDLGISPD 491
R D + + ++ GI P+
Sbjct: 599 RITDTMMLQCDMIKTGILPN 618
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 1/293 (0%)
Query: 199 FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYAR 258
+ M+ RG+ P++ + L C + K + ++M S +P+ + I R
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
++ A +++ K + +SA+I Y +GN +Y ++ V PN+V
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+ L+ +A+ A++++ MVK G PN Y L+ +C++ +A+ + EM+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
D Y +L + EA ++F MK+ P + TY SLI+ Y +
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSLIHGYCKEYNM 425
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+A L +EM G EPNI+ ++L+ Y + + ++ ++ GI PD
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 148/316 (46%), Gaps = 9/316 (2%)
Query: 170 IKPARHVVLYNV-TLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
IKP +V +Y + L L R+ K AEK+F+ M + GV PNL T+S ++
Sbjct: 230 IKP--NVYIYTIYILDLCRDNK-MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR 286
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD--TVAFSA 286
+A ++++ E P+ + +++ + + + A SL+ K+ VD ++
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF--VHMVKFGVDPNLYVYNC 344
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
LI + SGN + + S+M+ L P++ TY L+ + + +A ++++M
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
P+ TY +L+ YC+ E AL + EM G + + + ++ L D + + AM
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
++ +M G PD TYT+LI+ + + EA L ++M+ G PN LV
Sbjct: 465 GLYFEMTIKG-IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 467 YGKAKRADDVVKIFNQ 482
+ K R + + +
Sbjct: 524 FWKEGRLSVAIDFYQE 539
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L EM + P++ T++ L+ +A F+KM + P S+I+
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y + N++ AL L + + FS LI Y + A + +Y +M + G P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++VTY L+ A + ++A +Y +M++ G PN T+A L+ + + A+ Y
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+E ++ + V + L + G A + F+DM+S G PD +Y S++ +
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG-ITPDICSYVSMLKGHLQ 596
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
++T+ L +MI+ G PN+L L Y
Sbjct: 597 EKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 1/250 (0%)
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
+C PD S++ R D Y + D + L + G Y
Sbjct: 159 KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK 218
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQA 360
+ +M LG KPN+ Y + + R + +A+ ++E M K+G PN TY+A++
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 361 YCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQP 420
YC+ A +YKE+ + V++ L D A +F M G P
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG-VDP 337
Query: 421 DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
+ + Y LI+ + G + EA LL+EM P++ T L++ + + ++F
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 481 NQLLDLGISP 490
++ + I P
Sbjct: 398 QKMKNERIFP 407
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 6/219 (2%)
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
FS LI + G ++ L V +MK P+ ++L + R +R Y+ M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM-LFDMCAHFGN 401
+ G P+ Y L Q + + EM G + +Y + + D+C
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD-NK 249
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
+EA K+F MK G P+ +TY+++I+ Y G V +A L E++ PN++
Sbjct: 250 MEEAEKMFELMKKHG-VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+LV + KA+ +F ++ G+ P+ +CL++
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 153/323 (47%), Gaps = 2/323 (0%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
++++ LK++ E A +FD M G P+L++ ++L++ A+ +++M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE-KWRVDTVAFSALIKMYGMSGN 296
SFE PD + ++ Y R GNVD A+ ++ ++ V +++LI Y M G+
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ V M G N+VTY +L+ + +A+ ++E + + + Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ YCR DA+ V+ M E G + + N L + G EA +IF+ M +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM-NDW 395
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+PD+ TY +L++ Y G V EA L ++M + P ++ L+ Y + DV
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 477 VKIFNQLLDLGISPDDRFCDCLL 499
+ ++ +L G++ D+ C LL
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLL 478
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 5/318 (1%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV YN + + I D ++ M +RGV N++T+++L+ + +A F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
E + + D ++ ++ Y R G + A+ ++D R +T ++LI Y S
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G ++S M KP+ TYN L+ RA +A + ++M + P TY
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
LL+ Y R D LS++K M ++G + D++ + L + G+ +EAMK++ ++ +
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLN--EMIRCGFEPNILALTSLVHLYGKAKR 472
G D T +I+ M KV EA+ +L+ + RC +P + +L H Y K
Sbjct: 500 RG-LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC--KPAVQTYQALSHGYYKVGN 556
Query: 473 ADDVVKIFNQLLDLGISP 490
+ + + GI P
Sbjct: 557 LKEAFAVKEYMERKGIFP 574
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 145/347 (41%), Gaps = 38/347 (10%)
Query: 183 LKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
L+ ++ DF A KL++ +L RG+ + IT + +++ ++A E + + F C
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS 302
+P ++ + Y ++GN+ A ++ + + + ++ LI + +
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
+ +++ G P + TY L+ A EM++ G + N + + +
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 363 RARCSEDA-------------LSVYKEMKE----------KGKDV--------------- 384
R ++A L Y+ +KE K + +
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
+ ++YN+ G ++A K+F+D+ SS PD +TYT LI+ + G + +A L
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+EM G PNI+ +L+ K D ++ ++L GI+P+
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 155/361 (42%), Gaps = 15/361 (4%)
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKL 185
+Q + +L+ G R+A+ V DNM+ +I + + N +
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMI--------------EIGVRTNTTICNSLING 375
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPD 245
+ + AE++F M +KP+ T++TLV +A++ ++M E P
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS 305
++ Y+RIG LSL+ D ++ S L++ G+++ + ++
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 306 DMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
++ G + +T N ++ + + ++ +AK I + + P TY AL Y +
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
++A +V + M+ KG +YN L + + ++ + ++++ G P TY
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG-LTPTVATY 614
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+LI + +G + +A A EMI G N+ + + + + + D+ + +++D
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 486 L 486
Sbjct: 675 F 675
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 217 LVACASTCSVPHKAVEWFEK-MPSFECEPDDNLSASMIYVYARIGNVDMALSLY-DRAKT 274
L A A+TC K E E P P++ + I + G ++ A L+ D +
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
+++ D ++ LI ++G+ + ++ +M + G PN+VTYN L+ + +
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
A+ + ++ + G +PN TY L+ ++ +A+ + ++M EKG
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 141/327 (43%), Gaps = 13/327 (3%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
+ KPA V Y + ++ + A + + M ++G+ P + ++TL++ A +
Sbjct: 536 RCKPA--VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMA----LSLYDRAKTEKWRVDTVAF 284
K + ++ + P ++I + IG +D A + ++ T + +
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRA--KRARDAKTIYEEM 342
++L ++ + +ACL + + P + L A K + A+++
Sbjct: 654 NSLFRLDKID---EACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENST 710
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV-DKVLYNMLFDMCAHFGN 401
K PN Y + C+A EDA ++ ++ + + D+ Y +L CA G+
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 770
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
++A + +M G P+ TY +LI +G V A+ LL+++ + G PN +
Sbjct: 771 INKAFTLRDEMALKG-IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGI 488
+L+ K+ + +++ ++++ G+
Sbjct: 830 TLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 124/299 (41%), Gaps = 68/299 (22%)
Query: 261 NVDMALSLYDRA-KTEKWRVDTVA------------------------------------ 283
N + L +++ A K +K+R D A
Sbjct: 83 NPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWG 142
Query: 284 ---------------FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
F ++K+Y G L V+ +M G P++++ N+LL + R
Sbjct: 143 ELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVR 202
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK-GKDVDKV 387
A +Y++M+ SP+ T + ++ AYCR+ + A+ KE + G +++ V
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
YN L + A G+ + ++ M G + TYTSLI Y G + EAE + E
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERG-VSRNVVTYTSLIKGYCKKGLMEEAEHVF-E 320
Query: 448 MIRCGFEPNILALTSLVHLYG-------KAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+++ E ++A H+YG + + D V++ + ++++G+ + C+ L+
Sbjct: 321 LLK---EKKLVADQ---HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLI 373
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E ++ I P +V YN + F + A++L +M++R + P+++TF+ L++ +
Sbjct: 321 EMLEKGIAP--NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+A + ++M PD SMIY + + D A ++D + D V
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVT 434
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
F+ +I +Y + D + + ++ G N TYN L++ A+ +++EM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+G P+ T LL +C E+AL +++ ++ D+D V YN++ D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
EA +F + G +PD TY +I+ + +++A L ++M G EP+ +L
Sbjct: 555 EAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ KA D +++ +++ G S D
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 189/450 (42%), Gaps = 47/450 (10%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK 208
V M P+ A+ + + + P ++ +N+ +K F + + F ++ + G +
Sbjct: 115 VFVRMNRPDVAISLYRKMEIRRIPL-NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQ 173
Query: 209 PNLITFSTLV-----------ACASTCSVPH----KAVEWFEKMPSFECEPDDNLSASMI 253
P+++TF+TL+ A A + +AV F++M P ++I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
G V A +L ++ + +D V + ++ G+ + L++ S M+ K
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P++V Y+ ++ + + DA+ ++ EM++ G +PN TY ++ +C DA +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI------------------------- 408
++M E+ + D + +N L G EA K+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 409 ---FADMKSSGD--CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
F D K D PD T+ ++I++Y +V E LL E+ R G N +L
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPR-QELGKITACIEKAKP 522
+H + + + +F +++ G+ PD C+ LLY + + +E ++ I+ +K
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 523 KLGSVVRYLTEEHEGDGDFRKEALELFNSI 552
L +V + G EA +LF S+
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 155/344 (45%), Gaps = 22/344 (6%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A+ F+Y + +P V N + +F + A L+ +M R + N+ +F+
Sbjct: 88 DDAIDFFDYMVRS-RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ C C ++ F K+ +PD ++++ + AL+L+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG------ 200
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ V+T A+ +++ M +G P ++T+N L+ + R +A
Sbjct: 201 YMVETGFLEAV--------------ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +MV G + TY ++ C+ ++ AL++ +M+E D V+Y+ + D
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
G+ +A +F++M G P+ FTY +I+ + G+ ++A+ LL +MI P+
Sbjct: 307 CKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+L +L+ K + + K+ +++L I PD + ++Y
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 153/367 (41%), Gaps = 50/367 (13%)
Query: 90 VNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQV-SEMLVKGLGENVTEREAMI 148
+N S + +K S+ +++L K D + Q + SEML KG+ NV MI
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCK--DGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 149 VLDNMVN----PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
D + + L + +++I P V+ +N + + AEKL DEML
Sbjct: 339 --DGFCSFGRWSDAQRLLRDMIEREINP--DVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 205 RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
R + P+ +T+++++ + A F+ M S PD ++I VY R VD
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
+ L +T ++ LI + N +A ++ +M G P+ +T N LLY
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 325 AMGRAKRARDAKTIYE--EMVK---------------------------------NGFSP 349
++ +A ++E +M K +G P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
+ TY ++ +C DA ++ +MK+ G + D YN L C G D+++++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 410 ADMKSSG 416
++M+S+G
Sbjct: 631 SEMRSNG 637
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV +N + ++ K +L E+ +RG+ N T++TL+ + A + F+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M S PD ++Y + ++ AL L++ + K +DTVA++ +I
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D ++ + + G +P++ TYN ++ DA ++ +M NG P+ TY
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
L++ +A + ++ + EM+ G D M
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 149/318 (46%), Gaps = 2/318 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV YN + K+ A +F +L++G+KPN T+S L+ A+E
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR-VDTVAFSALIKMYGM 293
M S E + + ++I ++G A L EK V ++++++I +
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G D+ ++ Y +M G PN++TY +L+ + + R A + +EM G + P
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
Y AL+ +C+ E A +++ E+ E+G + + +YN L + GN A+ ++ M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
G + D TYT+LI+ G + A L EM G P+ + T +V+ K +
Sbjct: 717 KDG-LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 474 DDVVKIFNQLLDLGISPD 491
VVK+F ++ ++P+
Sbjct: 776 VKVVKMFEEMKKNNVTPN 793
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 9/313 (2%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSA 250
D A LFD+M + G PN +TFS L+ KA+E+++KM P
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
++I + + + AL L+D + E + + ++ G D + S M+
Sbjct: 414 TIIQGWLKGQKHEEALKLFDES-FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G PN+V+YNN++ R K A+ ++ +++ G PN TY+ L+ R ++A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
L V M +V+ V+Y + + G +A ++ A+M +Y S+I+
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+ G++ A A EM G PN++ TSL++ K R D +++ +++ + G+
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 491 D--------DRFC 495
D D FC
Sbjct: 653 DIPAYGALIDGFC 665
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%)
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
L D AK+ + V++ AF+ L+ Y D + + + M L P N L A+
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
+ +AK +Y MV G + T L++A R +AL V E+G + D +
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
LY++ C + A + +MK C P TYTS+I G + +A L +E
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
M+ G N++A TSL+ + K + +F+++ G SP+
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPN 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 142/314 (45%), Gaps = 3/314 (0%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N TL + A++L+ M+ GV + +T L+ + P +A+E +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV-AFSALIKMYGMSGNYD 298
EPD L + + + ++ MA SL K +K V + ++++I GN D
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ + +M G N+V +L+ + A ++++M K G SPN T++ L+
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ + + E AL YK+M+ G + + +EA+K+F + +G
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-- 439
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
+ F ++++ GK EA LL++M G PN+++ +++ + + K D
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 479 IFNQLLDLGISPDD 492
+F+ +L+ G+ P++
Sbjct: 500 VFSNILEKGLKPNN 513
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 154/393 (39%), Gaps = 88/393 (22%)
Query: 180 NVTLKLF-----REIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEW 233
NVT +L RE K A ++ ++RG +P+ + +S V AC T +
Sbjct: 233 NVTTQLLMRASLREEKP-AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMA---------------------------- 265
E C P S+I + GN+D A
Sbjct: 292 REMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCK 351
Query: 266 -------LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
L L+D+ + E ++V FS LI+ + +G + L Y M+VLG P++
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFH 411
Query: 319 YNNLLYAMGRAKRARDAKTIYEE----------------------------------MVK 344
+ ++ + ++ +A +++E M
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
G PN +Y ++ +CR + + A V+ + EKG + Y++L D C F N DE
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC--FRNHDE 529
Query: 405 --AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR----CGFEPNIL 458
A+++ M SS + + + Y ++IN +G+ ++A LL MI C + +
Sbjct: 530 QNALEVVNHMTSS-NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC---VSCM 585
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ S++ + K D V + ++ GISP+
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 157 ETALLAFEYF-KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
++A+ A+E I P +V+ Y + + +A ++ DEM +GVK ++ +
Sbjct: 601 DSAVAAYEEMCGNGISP--NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L+ S A F ++ P + S+I + +GN+ AL LY + +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
R D ++ LI GN +Y++M+ +G P+ + Y ++ + + +
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
++EEM KN +PN Y A++ + R ++A ++ EM +KG D +++L +
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL--V 836
Query: 396 CAHFGN 401
GN
Sbjct: 837 SGQVGN 842
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + F + + A ++EM G+ PN+IT+++L+ + +A+E ++M
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ + D ++I + + N++ A +L+ E +++LI + GN
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
A L +Y M G + ++ TY L+ + + A +Y EM G P+ Y ++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ + +++EMK+ + ++YN + GN DEA ++ +M G
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG-I 825
Query: 419 QPDNFTYTSLI 429
PD T+ L+
Sbjct: 826 LPDGATFDILV 836
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 148/315 (46%), Gaps = 6/315 (1%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
L N +KL R ++D A KLFDE L+ + TF+ L+ KA+E M
Sbjct: 177 LLNTLVKLDR-VED---AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK-WRVDTVAFSALIKMYGMSGN 296
F CEPD ++I + + ++ A ++ K+ D V ++++I Y +G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
S+ DM LG P VT+N L+ +A A+ I +M+ G P+ T+ +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ YCR +++EM +G + Y++L + + +A ++ + +S
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL-ASK 411
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
D P F Y +I+ + GKV EA ++ EM + +P+ + T L+ + R +
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 477 VKIFNQLLDLGISPD 491
V IF++++ +G SPD
Sbjct: 472 VSIFHKMVAIGCSPD 486
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 6/311 (1%)
Query: 185 LFREIKDFGRAEK---LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
L R + G+AEK L M G +P+++T++TL+ + +KA E F+ + S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 242 -CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
C PD SMI Y + G + A SL D V F+ L+ Y +G
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQA 360
+ M G P++VT+ +L+ R + ++EEM G PN TY+ L+ A
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 361 YCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQP 420
C A + ++ K +YN + D G +EA I +M+ C+P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK-KCKP 450
Query: 421 DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
D T+T LI + G++ EA ++ ++M+ G P+ + ++SL+ KA A + +
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL- 509
Query: 481 NQLLDLGISPD 491
NQ+ G S +
Sbjct: 510 NQIARKGQSNN 520
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 150 LDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKP 209
LDN NP +E+ + K+ YN+ + + A ++F+ M GV P
Sbjct: 79 LDN--NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSP 136
Query: 210 NLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY 269
N LV+ + H A + SFE E + S++ ++ V+ A+ L+
Sbjct: 137 NNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF 194
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRA 329
D + DT F+ LI+ G + L + M G +P++VTYN L+ ++
Sbjct: 195 DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 330 KRARDAKTIYEEMVKNG--FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
A ++++ VK+G SP+ TY +++ YC+A +A S+ +M G V
Sbjct: 255 NELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
+N+L D A G A +I M S G C PD T+TSLI+ Y +G+V++ L E
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFG-CFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--------DRFC 495
M G PN + L++ R ++ QL I P D FC
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y + + + A L D+ML+ G+ P +TF+ LV + A E
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
KM SF C PD S+I Y R+G V L++ + +S LI
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC--- 393
Query: 296 NYDACLSVYSDMKVLGAK---PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
N + L + L +K P YN ++ +A + +A I EEM K P+
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
T+ L+ +C +A+S++ +M G DK+ + L G A EA
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 148/315 (46%), Gaps = 6/315 (1%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
L N +KL R ++D A KLFDE L+ + TF+ L+ KA+E M
Sbjct: 177 LLNTLVKLDR-VED---AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK-WRVDTVAFSALIKMYGMSGN 296
F CEPD ++I + + ++ A ++ K+ D V ++++I Y +G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
S+ DM LG P VT+N L+ +A A+ I +M+ G P+ T+ +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ YCR +++EM +G + Y++L + + +A ++ + +S
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL-ASK 411
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
D P F Y +I+ + GKV EA ++ EM + +P+ + T L+ + R +
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 477 VKIFNQLLDLGISPD 491
V IF++++ +G SPD
Sbjct: 472 VSIFHKMVAIGCSPD 486
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 6/311 (1%)
Query: 185 LFREIKDFGRAEK---LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
L R + G+AEK L M G +P+++T++TL+ + +KA E F+ + S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 242 -CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
C PD SMI Y + G + A SL D V F+ L+ Y +G
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQA 360
+ M G P++VT+ +L+ R + ++EEM G PN TY+ L+ A
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 361 YCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQP 420
C A + ++ K +YN + D G +EA I +M+ C+P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK-KCKP 450
Query: 421 DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
D T+T LI + G++ EA ++ ++M+ G P+ + ++SL+ KA A + +
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL- 509
Query: 481 NQLLDLGISPD 491
NQ+ G S +
Sbjct: 510 NQIARKGQSNN 520
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 150 LDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKP 209
LDN NP +E+ + K+ YN+ + + A ++F+ M GV P
Sbjct: 79 LDN--NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSP 136
Query: 210 NLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY 269
N LV+ + H A + SFE E + S++ ++ V+ A+ L+
Sbjct: 137 NNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF 194
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRA 329
D + DT F+ LI+ G + L + M G +P++VTYN L+ ++
Sbjct: 195 DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 330 KRARDAKTIYEEMVKNG--FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
A ++++ VK+G SP+ TY +++ YC+A +A S+ +M G V
Sbjct: 255 NELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
+N+L D A G A +I M S G C PD T+TSLI+ Y +G+V++ L E
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFG-CFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--------DRFC 495
M G PN + L++ R ++ QL I P D FC
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y + + + A L D+ML+ G+ P +TF+ LV + A E
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
KM SF C PD S+I Y R+G V L++ + +S LI
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC--- 393
Query: 296 NYDACLSVYSDMKVLGAK---PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
N + L + L +K P YN ++ +A + +A I EEM K P+
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
T+ L+ +C +A+S++ +M G DK+ + L G A EA
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 165/378 (43%), Gaps = 32/378 (8%)
Query: 144 REAMIVLDNMVNPETALL-------AFEYFKQKIKPARHVVLYNVTLKLFRE-------- 188
R ++L+ NPET+L +++++++ H + ++ LF E
Sbjct: 18 RRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIP 77
Query: 189 -IKDFGRAEK-------------LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
I DF R L+ +M G+ +L +F+ L+ C CS A+
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
KM P S++ + + A+SL D + + V ++ +I +
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
+ + L V+ M+ G + + VTYN L+ + + R DA + +MVK PN +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMK 413
AL+ + + +A ++YKEM + + YN L + C H G +A +F M
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH-GCLGDAKYMFDLMV 316
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
S G C PD TY +LI + +V + L EM G + +L+H Y +A +
Sbjct: 317 SKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 474 DDVVKIFNQLLDLGISPD 491
+ K+FN+++D G+SPD
Sbjct: 376 NVAQKVFNRMVDCGVSPD 393
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 147/322 (45%), Gaps = 1/322 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV+YN + + +D A ++F M ++G++ + +T++TL++ S A
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
M + +P+ ++I + + GN+ A +LY + +++LI + +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G ++ M G P++VTYN L+ ++KR D ++ EM G + TY
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ YC+A A V+ M + G D V YN+L D + G ++A+ + D++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
S + D TY +I K+ EA L + R G +P+ +A +++ +
Sbjct: 423 S-EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 475 DVVKIFNQLLDLGISPDDRFCD 496
+ K+ ++ + G P +R D
Sbjct: 482 EADKLCRRMKEDGFMPSERIYD 503
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 79/186 (42%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV YN + F + K KLF EM +G+ + T++TL+ + A + F
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M PD ++ G ++ AL + + + + VD + ++ +I+ +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
++ + G KP+ + Y ++ + R R+A + M ++GF P+ Y
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Query: 356 ALLQAY 361
L+ +
Sbjct: 504 ETLRDH 509
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 176/421 (41%), Gaps = 56/421 (13%)
Query: 115 LAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPAR 174
+ ++LDS E +S E ++ +E I+L ++ E A+ FE+FK K
Sbjct: 131 ILEALDSIEDVEDALSP-----WAERLSNKERTIILKEQIHWERAVEIFEWFKSKGCYEL 185
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+V+ YN+ L++ + + + L+DEM+++G+KP T+ TL+ S + A+ W
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 235 EKMPSFECEPDDNLSA-----------------------------------------SMI 253
KM +PD+ + +MI
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
Y + G + A + R E TV F+ +I +YG +G S+ MK L
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCA 364
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P+ TYN L+ + A ++EM +G P+ +Y LL A+ E+A +
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
EM + ++D+ + L M +++ F +G+ + Y++ I+ Y
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG--YSANIDAYG 482
Query: 434 CMGKVTEAEALLNEMIRCGFEPN---ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
G ++EAE + C E N ++ ++ YG +K + ++F ++ G++P
Sbjct: 483 ERGYLSEAERVF----ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 491 D 491
D
Sbjct: 539 D 539
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 186/445 (41%), Gaps = 64/445 (14%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + L + D RA F EM G+KP+ +++ TL+ S + +A +M
Sbjct: 370 YNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD 429
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK-----------------------TE 275
E D+ +++ +Y ++ + S + R +E
Sbjct: 430 DDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSE 489
Query: 276 KWRV----------DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
RV + ++ +IK YG+S + + ++ M G P+ TYN L+
Sbjct: 490 AERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQI 549
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
+ A + E+M + G+ + Y A++ ++ + A VYKEM E + D
Sbjct: 550 LASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPD 609
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
V+Y +L + A GN +AM MK +G ++ Y SLI +Y+ +G + EAEA+
Sbjct: 610 VVVYGVLINAFADTGNVQQAMSYVEAMKEAG-IPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 446 NEMIRCGFE---PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYV- 501
++++ + P++ +++LY + IF+ + G + + F L
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYK 728
Query: 502 -------ATQIPRQ--ELGKITACIEKAKPKLGSVVRYLTEEHEGDGDFRKEALELFNSI 552
ATQI +Q E+ +T + SV+ DG F KEA+E F +
Sbjct: 729 KNGRFEEATQIAKQMREMKILTDPL-----SYNSVLGLFAL----DGRF-KEAVETFKEM 778
Query: 553 -------DDDVKKSLCNCLIDLCVS 570
DD KSL L+ L +S
Sbjct: 779 VSSGIQPDDSTFKSLGTILMKLGMS 803
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E + I+P VV+Y V + F + + +A + M + G+ N + +++L+ +
Sbjct: 600 EMVEYNIEP--DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 224 CSVPHKAVEWFEKMPSFECE----PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A + K+ C PD S MI +Y+ V A +++D K ++
Sbjct: 658 VGYLDEAEAIYRKLLQ-SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK-QRGEA 715
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ F+ ++ MY +G ++ + M+ + + ++YN++L R ++A +
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
+EMV +G P+ T+ +L + S+ A+ +E+++K
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKK 816
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E ++ I P +V YN + F + A++L +M++R + P+++TF+ L++ +
Sbjct: 321 EMLEKGIAP--NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+A + ++M PD SMIY + + D A ++D + D V
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVT 434
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
F+ +I +Y + D + + ++ G N TYN L++ A+ +++EM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+G P+ T LL +C E+AL +++ ++ D+D V YN++ D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
EA +F + G +PD TY +I+ + +++A L ++M G EP+ +L
Sbjct: 555 EAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ KA D +++ +++ G S D
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 189/450 (42%), Gaps = 47/450 (10%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK 208
V M P+ A+ + + + P ++ +N+ +K F + + F ++ + G +
Sbjct: 115 VFVRMNRPDVAISLYRKMEIRRIPL-NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQ 173
Query: 209 PNLITFSTLV-----------ACASTCSVPH----KAVEWFEKMPSFECEPDDNLSASMI 253
P+++TF+TL+ A A + +AV F++M P ++I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
G V A +L ++ + +D V + ++ G+ + L++ S M+ K
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P++V Y+ ++ + + DA+ ++ EM++ G +PN TY ++ +C DA +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI------------------------- 408
++M E+ + D + +N L G EA K+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 409 ---FADMKSSGD--CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
F D K D PD T+ ++I++Y +V E LL E+ R G N +L
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPR-QELGKITACIEKAKP 522
+H + + + +F +++ G+ PD C+ LLY + + +E ++ I+ +K
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 523 KLGSVVRYLTEEHEGDGDFRKEALELFNSI 552
L +V + G EA +LF S+
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 155/344 (45%), Gaps = 22/344 (6%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A+ F+Y + +P V N + +F + A L+ +M R + N+ +F+
Sbjct: 88 DDAIDFFDYMVRS-RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ C C ++ F K+ +PD ++++ + AL+L+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------G 200
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ V+T A+ +++ M +G P ++T+N L+ + R +A
Sbjct: 201 YMVETGFLEAV--------------ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +MV G + TY ++ C+ ++ AL++ +M+E D V+Y+ + D
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
G+ +A +F++M G P+ FTY +I+ + G+ ++A+ LL +MI P+
Sbjct: 307 CKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+L +L+ K + + K+ +++L I PD + ++Y
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 4/239 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV +N + ++ K +L E+ +RG+ N T++TL+ + A + F+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M S PD ++Y + ++ AL L++ + K +DTVA++ +I
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D ++ + + G +P++ TYN ++ DA ++ +M NG P+ TY
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L++ +A + ++ + EM+ G D M+ D+ G D++ F+DM S
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD-GRLDKS---FSDMLS 666
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 36/313 (11%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+N + + D ++FD + RGVKP + LV + + ++M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM- 416
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
VD LS +++A+I + +
Sbjct: 417 ----------------------GVDGLLS------------SVYSYNAVIDCLCKARRIE 442
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++M+ G PN+VT+N L + + E+++ +GF P+ T++ ++
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
CRA+ +DA +KEM E G + +++ YN+L C G+ D ++K+FA MK +G
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG-L 561
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
PD + Y + I + M KV +AE LL M+R G +P+ ++L+ ++ R + +
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 479 IFNQLLDLGISPD 491
+F+ + G PD
Sbjct: 622 MFSSIERHGCVPD 634
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 157/377 (41%), Gaps = 16/377 (4%)
Query: 122 CNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQ----KIKPARHVV 177
CN Q+S LG + R V+D +V + LA+ F+Q KP R
Sbjct: 164 CNDVFAQISF-----LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFT- 217
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
YN+ + + A +L +M Q G +PN+ T++ L+ +A++ E M
Sbjct: 218 -YNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ P++ + ++ R A + + + V + A+ +Y +S N
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAV--LYCLSNNS 334
Query: 298 DACLSVYSDMKV--LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
A + K+ G P+ T+N + + + + I++ V G P + Y
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+QA A+ + K+M G YN + D + A +M+
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G P+ T+ + ++ YS G V + +L +++ GF+P+++ + +++ +AK D
Sbjct: 455 G-ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 476 VVKIFNQLLDLGISPDD 492
F ++L+ GI P++
Sbjct: 514 AFDCFKEMLEWGIEPNE 530
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D +L + + R G + +++ L + +R+ LI +G G C V+
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+ + LG KP+ YN ++ A+ ++ A +++M +G P+ TY L+ C+
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
++A+ + K+M+++G + Y +L D G DEA+K M+ P+ T
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVR-KLNPNEAT 287
Query: 425 YTSLIN-MYSCMGKVTEAEALLNEM 448
+ ++ ++ C+ E L+ M
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFM 312
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPE----TALLAFEYFKQKIKPARHVVLYNV 181
++ + +M V GL +V A V+D + A+ E + I P ++V +N
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNA--VIDCLCKARRIENAAMFLTEMQDRGISP--NLVTFNT 465
Query: 182 TLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
L + D + + +++L G KP++ITFS ++ C A + F++M +
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
EP++ +I G+ D ++ L+ + K D A++A I+ +
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
+ M +G KP+ TY+ L+ A+ + R +A+ ++ + ++G P+ T
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 4/309 (1%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
RA LF+E L +G+KPN+I ++TL+ S + +A + +M P+ ++
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
++G V A L ++ + D F+ LI Y + L + M G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P++ TYN+LL + + + D Y+ MV+ G +PN T+ LL++ CR R ++AL +
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+EMK K + D V + L D G+ D A +F M+ + TY +I+ ++
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD-- 491
VT AE L EM+ P+ +V + K + K ++++ G P
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 492 --DRFCDCL 498
R +CL
Sbjct: 674 TLGRVINCL 682
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 156/386 (40%), Gaps = 71/386 (18%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V YN + + + F +A K++ M RG+ P++ +F+ + S PH A+
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 236 KMPSFECEP-------------DDNLSAS----------------------MIYVYARIG 260
M S CE ++N A ++ V + G
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 230
Query: 261 NVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
+V L D+ + ++ I+ G D + + + G KP+++TYN
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR--------------- 365
NL+Y + + + ++A+ +MV G P+ TY L+ YC+
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 366 ----------------CSED----ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
C E AL+++ E KG + +LYN L ++ G EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
++ +M G P+ T+ L+N MG V++A+ L+ MI G+ P+I L+H
Sbjct: 411 AQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPD 491
Y + ++ ++I + +LD G+ PD
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPD 495
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 143/325 (44%), Gaps = 9/325 (2%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ ++ + + A ++ ++++G KP++IT++ L+ S +A + KM
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ EPD ++I Y + G V +A + A + D + +LI G +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
L+++++ G KPN++ YN L+ + +A + EM + G P T+ L+
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
C+ C DA + K M KG D +N+L + + A++I M +G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG-V 492
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
PD +TY SL+N K + M+ G PN+ L+ + ++ D+ +
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 479 IFNQLLDLGISPD--------DRFC 495
+ ++ + ++PD D FC
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFC 577
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 1/312 (0%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P V+ YN + + F AE +M+ G++P+ T++TL+A + A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
PD S+I G + AL+L++ A + + + + ++ LIK
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G + ++M G P + T+N L+ + + DA + + M+ G+ P+
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
T+ L+ Y E+AL + M + G D D YN L + ++ M+ +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
M G C P+ FT+ L+ K+ EA LL EM P+ + +L+ + K
Sbjct: 522 MVEKG-CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 472 RADDVVKIFNQL 483
D +F ++
Sbjct: 581 DLDGAYTLFRKM 592
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+AV FE+M ++CEP +++ V G D A +Y R + D +F+
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMV------------------------------ 317
+K + + A L + ++M G + N+V
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 318 -----TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
T+N LL + + ++ + + ++++K G PN TY +Q C+ + A+
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 373 VYKEMKEKGKDVDKVLY-NMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ + E+G D + Y N+++ +C + EA M + G +PD++TY +LI
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKN-SKFQEAEVYLGKMVNEG-LEPDSYTYNTLIAG 330
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
Y G V AE ++ + + GF P+ SL+ + + +FN+ L GI P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 9/270 (3%)
Query: 227 PHKAVEWFEKMPSFECEPDDNLSA--SMIYVYARIGNVD-MALSLYDRAKTEKWRVDTVA 283
P KA+E F M E LS S+I G + M L D + +
Sbjct: 20 PMKALEMFNSMRK-EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
+ +K YG G ++V+ M +P + +YN ++ + + A +Y M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
G +P+ ++ ++++C+ AL + M +G +++ V Y +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 404 EAMKIFADMKSSGD--CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
E ++F M +SG C T+ L+ + G V E E LL+++I+ G PN+
Sbjct: 199 EGYELFGKMLASGVSLCLS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ + D V++ L++ G PD
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 21/236 (8%)
Query: 148 IVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGV 207
++LDN V+P+ V YN L + F + + M+++G
Sbjct: 486 VMLDNGVDPD------------------VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALS 267
PNL TF+ L+ +A+ E+M + PD ++I + + G++D A +
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 268 LYDRAKTEKWRV--DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
L+ R E ++V T ++ +I + N ++ +M P+ TY ++
Sbjct: 588 LF-RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
+ EM++NGF P+ T ++ C +A + M +KG
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 167/437 (38%), Gaps = 76/437 (17%)
Query: 129 VSEMLVKGLGENVTEREAMI--VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLF 186
V EM+ G NV +I L N + + E +Q I P + YN +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP--DIFCYNSLIIGL 497
Query: 187 REIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
+ K A EM++ G+KPN T+ ++ S A ++ ++M P+
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 247 NLSASMIYVYARIGNVDMALSLY---------DRAKT------------------EKWRV 279
L +I Y + G V A S Y AKT E +R
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 280 --------DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
D ++ LI + GN S++ +M G PN++ YN LL R+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
AK + +EM G PN TY ++ YC++ +A ++ EMK KG D +Y
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 392 LFDMCAHFGNADEAMKIFAD-----------------------------------MKSSG 416
L D C + + A+ IF M S
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 417 D--CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
D +P++ TY +I+ G + A+ L ++M P ++ TSL++ Y K R
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 475 DVVKIFNQLLDLGISPD 491
++ +F++ + GI PD
Sbjct: 858 EMFPVFDEAIAAGIEPD 874
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 1/298 (0%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+A+ LFD M+ G+ P +++L+ + E +M +++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
G++D A ++ R + V ++ LIK + + + + V +MK G
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P++ YN+L+ + +AKR +A++ EMV+NG PN TY A + Y A A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
KEM+E G +KVL L + G EA + M G D TYT L+N
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-ILGDAKTYTVLMNGLF 603
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
KV +AE + EM G P++ + L++ + K IF+++++ G++P+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 5/322 (1%)
Query: 174 RHVVL----YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
R++V+ Y +K D A + EM+ G +PN++ ++TL+ S
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
A+ ++M PD S+I ++ +D A S + + + A I
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
Y + + + +M+ G PN V L+ + + +A + Y MV G
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
+ TY L+ + +DA +++EM+ KG D Y +L + + GN +A IF
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
+M G P+ Y L+ + G++ +A+ LL+EM G PN + +++ Y K
Sbjct: 651 DEMVEEG-LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 470 AKRADDVVKIFNQLLDLGISPD 491
+ + ++F+++ G+ PD
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPD 731
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 6/294 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
AE++F EM +G+ P++ ++ L+ S KA F++M P+ + ++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ R G ++ A L D + + V + +I Y SG+ ++ +MK+ G P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ Y L+ R A TI+ K S P + AL+ + +E V
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP-FNALINWVFKFGKTELKTEVL 789
Query: 375 KEMKEKGKDV----DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+ + D + V YN++ D GN + A ++F M+++ + P TYTSL+N
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA-NLMPTVITYTSLLN 848
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
Y MG+ E + +E I G EP+ + + +++ + K + + +Q+
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+D +S LI N DA + +M G Y+ + M + AK +
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
++ M+ +G P YA+L++ YCR + + EMK++ + Y +
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G+ D A I +M +SG C+P+ YT+LI + + +A +L EM G P+I
Sbjct: 430 SGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
SL+ KAKR D+ ++++ G+ P+
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 126/322 (39%), Gaps = 8/322 (2%)
Query: 185 LFREIKDFGRAE-------KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
LF+ K+F A KL + M+ +G+ P T+ L+ A +M
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
S D++ + +I + N D A L + + + I + G
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ +++ M G P Y +L+ R K R + EM K + TY +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
++ C + + A ++ KEM G + V+Y L +AM++ +MK G
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG- 482
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
PD F Y SLI S ++ EA + L EM+ G +PN + + Y +A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 478 KIFNQLLDLGISPDDRFCDCLL 499
K ++ + G+ P+ C L+
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLI 564
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 51/279 (18%)
Query: 252 MIYVYARIGNVDMALSLYDRAKTEK-WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
+I + R GNV + + KTEK +R T+ N D L + M
Sbjct: 227 LIIAHCRAGNVQLGKDVL--FKTEKEFRTATL-------------NVDGALKLKESMICK 271
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G P TY+ L+ + + KR DAK++ EM G S + TY+ L+ + R ++ A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS--------------G 416
+ EM G ++ +Y+ + + G ++A +F M +S G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 417 DCQPDN--------------------FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
C+ N +TY +++ G + A ++ EMI G PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC 495
++ T+L+ + + R D +++ ++ + GI+P D FC
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP-DIFC 489
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 49/369 (13%)
Query: 120 DSCNPTEQQVSEMLVKGLGENVTEREAMI-VLDNMVNPETALLAF-EYFKQKIKPARHVV 177
D + E+ EM KG+ +V +I + N + A F E ++ + P +V+
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP--NVI 663
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+YN+ L F + +A++L DEM +G+ PN +T+ T++ +A F++M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDR----------------------AKTE 275
PD + +++ R+ +V+ A++++ KTE
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 276 -KWRV---------------DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY 319
K V + V ++ +I GN +A ++ M+ P ++TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 320 NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
+LL + R + +++E + G P+ Y+ ++ A+ + + AL + +M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 380 KGKDVDKVLYNM-----LFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
K D ++ L A G + A K+ +M PD+ T LIN SC
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL-QYIPDSATVIELIN-ESC 961
Query: 435 MGKVTEAEA 443
+ EA
Sbjct: 962 ISSNQRVEA 970
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 148/318 (46%), Gaps = 1/318 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V +YN + + D+ A +L EM+++G+ PN+I++STL+ A +
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA-KTEKWRVDTVAFSALIKMYGMS 294
+M C P+ +S++ G AL L+++ + + + VA++ L++ +
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
GN +SV+S M+ +G PN+ TY +L+ + A I+ +M+ +G PN Y
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+++A CR ++A S+ + M ++ +N G D A K+F M+
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
C P+ TY L++ + ++ EA L E+ G E + +L+H A
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 475 DVVKIFNQLLDLGISPDD 492
+++ +++ G SPD+
Sbjct: 546 IALQLVGKMMVDGKSPDE 563
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 167/395 (42%), Gaps = 50/395 (12%)
Query: 131 EMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKL---FR 187
EM+ KG+ NV +I + + N LAF + Q +K H +Y ++ + F
Sbjct: 271 EMVEKGISPNVISYSTLI--NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 188 EIKDFGRAEKLFDEMLQR-GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
F A L+++M++ G++PN++ ++TLV + KAV F M C P+
Sbjct: 329 RGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI 387
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA----------------------- 283
S+I +A+ G++D A+ ++++ T + V
Sbjct: 388 RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Query: 284 ------------FSALIKMYGMSGNYDACLSVYSDMKVLG-AKPNMVTYNNLLYAMGRAK 330
F+A IK +G D V+ M+ PN+VTYN LL + +A
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
R +A + E+ G + TY LL C A AL + +M GK D++ N
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 391 MLFDMCAHFGNADEAMKIFADMKSSG--DCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
M+ G A+ A ++ D+ S G +PD +YT++I + LL M
Sbjct: 568 MIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 449 IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
I G P+I + L++ + DD+V+ +Q
Sbjct: 627 ISAGIVPSIATWSVLINCF----ILDDIVRAHDQF 657
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 7/300 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
+ L +M +G + F ++++ + +AVE F ++ F C+P + ++
Sbjct: 95 VQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 154
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ M +Y K + + + ++ L+K + D + +M G P
Sbjct: 155 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ V+Y ++ +M ++ + + E F P Y AL+ C+ + A +
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFELM 269
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+EM EKG + + Y+ L ++ + G + A M G C P+ +T +SL+
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFL 328
Query: 435 MGKVTEAEALLNEMIRC-GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
G +A L N+MIR G +PN++A +LV + V +F+ + ++G SP+ R
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 139/311 (44%), Gaps = 2/311 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
KD A K+F+EM +G + N + ++ L+ +A++ F KM EC P
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+I AL+L + + + ++ LI ++ + M
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G PN++TYN L+ + DA + E M SPN TY L++ YC++ +
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK- 445
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
A+ V +M E+ D V YN L D GN D A ++ + M G PD +TYTS+I
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG-LVPDQWTYTSMI 504
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
+ +V EA L + + + G PN++ T+L+ Y KA + D+ + ++L
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 490 PDDRFCDCLLY 500
P+ + L++
Sbjct: 565 PNSLTFNALIH 575
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 2/313 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN L ++++ EML+ V PN+ T++ +V +A ++ K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+PD S+I Y + ++D A +++ + R + VA++ LI ++ D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ ++ MK P + TY L+ ++ ++R +A + +EM + G PN TY L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ C E A + +M EKG + + YN L + G ++A+ + M+S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KL 424
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
P+ TY LI Y C V +A +LN+M+ P+++ SL+ ++ D +
Sbjct: 425 SPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 479 IFNQLLDLGISPD 491
+ + + D G+ PD
Sbjct: 484 LLSLMNDRGLVPD 496
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
K+++ ++ L+ G D VY +M PN+ TYN ++ + +A
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
++V+ G P++ TY +L+ YC+ + + A V+ EM KG ++V Y L
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
DEAM +F MK +C P TYT LI + +EA L+ EM G +P
Sbjct: 298 LCVARRIDEAMDLFVKMKDD-ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
NI T L+ + + ++ Q+L+ G+ P+
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 158/361 (43%), Gaps = 33/361 (9%)
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDF 192
L+KG ++ + AM VL+ M+ ++K+ P VV YN + +F
Sbjct: 434 LIKGYCKSNVHK-AMGVLNKML------------ERKVLP--DVVTYNSLIDGQCRSGNF 478
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
A +L M RG+ P+ T+++++ +A + F+ + P+ + ++
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I Y + G VD A + ++ ++ +++ F+ALI G + M +G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+P + T L++ + + A + +++M+ +G P+ TY +Q YCR DA
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+ +M+E G D Y+ L G + A + M+ +G C+P T+ SLI
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG-CEPSQHTFLSLIKHL 717
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
M + G EP + A+++++ D VV++ ++++ ++P+
Sbjct: 718 LEMKYGKQK----------GSEPELCAMSNMMEF-------DTVVELLEKMVEHSVTPNA 760
Query: 493 R 493
+
Sbjct: 761 K 761
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 139/353 (39%), Gaps = 63/353 (17%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
LFD + Q+GV PN++ ++ L+ +A EKM S C P+ ++I+
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 258 RIGNVDMALSLYDR----AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
G + A L ++ DT+ L+K G++D S + M G K
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK----DGDFDHAYSRFQQMLSSGTK 634
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P+ TY + R R DA+ + +M +NG SP+ TY++L++ Y + A V
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 374 YKEMKEKGKDVDK--------------------------VLYNML-FD--------MCAH 398
K M++ G + + + NM+ FD M H
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 399 ------------------FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
GN A K+F M+ + P + +L++ + K E
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 441 AEALLNEMIRCGFEPNILALTSLV-HLYGKAKRADDVVKIFNQLLDLGISPDD 492
A ++++MI G P + + L+ LY K ++ + +F LL G D+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEK-ERGTSVFQNLLQCGYYEDE 866
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 125/306 (40%), Gaps = 20/306 (6%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L ++M++ G++P + T + L+ A F++M S +PD + + I
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y R G + A + + + D +S+LIK YG G + V M+ G +P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 315 NMVTYNNLLYAMGRAKRARDAKT------------------IYEEMVKNGFSPNWPTYAA 356
+ T+ +L+ + K + + + E+MV++ +PN +Y
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 357 LLQAYCRARCSEDALSVYKEM-KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ C A V+ M + +G ++++N L C +EA K+ DM
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G + +Y G+ ++ +++CG+ + LA ++ GK +
Sbjct: 826 GHLPQLESCKVLICGLYK-KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884
Query: 476 VVKIFN 481
++FN
Sbjct: 885 FYELFN 890
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 141/308 (45%), Gaps = 15/308 (4%)
Query: 195 AEKLFDEMLQ--------RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
K+FDE+ Q + P I F ++ +P +A+ F++MP + C+
Sbjct: 59 GSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTV 118
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKT--EKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
S++ + G ++ + +R + E + D ++ LI SG +D L ++
Sbjct: 119 KSLNSLLSALLKCGELE---KMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLF 175
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK-NGFSPNWPTYAALLQAYCR 363
+M KP VT+ L++ + + R ++A + +M+K G P YA+L++A C+
Sbjct: 176 DEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQ 235
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
A + E E VD +Y+ L G ++E I +M G C+PD
Sbjct: 236 IGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG-CKPDTV 294
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
TY LIN + A +L+EM+ G +P++++ ++ ++ + K+ ++ +F +
Sbjct: 295 TYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDM 354
Query: 484 LDLGISPD 491
G SPD
Sbjct: 355 PRRGCSPD 362
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM- 237
YN+ + + F A KLFDEM+++ VKP +TF TL+ S +A++ M
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ P ++ AS+I +IG + A L D A K +VD +S LI +G
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ + +M G KP+ VTYN L+ + A + +EMV+ G P+ +Y +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L + R + E+A ++++M +G D + Y ++FD +EA I +M G
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 37/212 (17%)
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
++P H+ Y +K +I + A KL DE + +K + +STL++ ++
Sbjct: 219 VRPTVHI--YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNE 276
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
E+M C+P DTV ++ LI
Sbjct: 277 VSMILEEMSEKGCKP-----------------------------------DTVTYNVLIN 301
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
+ + + ++ V +M G KP++++YN +L R K+ +A ++E+M + G SP
Sbjct: 302 GFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSP 361
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
+ +Y + C E+A + EM KG
Sbjct: 362 DTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
P ++ F KM F+C+P +++ + +++A Y + + +
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 287 LIK-MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
LIK + G DA L ++ +M G P+ TY L+ + R R +AK ++ EMV+
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
+P TY +L+ C ++ ++A+ +EMK KG + + Y+ L D G + +A
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
M++F M + G C+P+ TYT+LI K+ EA LL+ M G +P+ ++
Sbjct: 282 MELFEMMMARG-CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPD 491
+ + + ++++ GI+P+
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPN 366
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 2/228 (0%)
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A L R K E V ++ + YG L V+ MK P+ Y +L
Sbjct: 70 AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA-LSVYKEMKEKGKD 383
+ + A Y+ M + G P + L++A CR + DA L ++ EM ++G D
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
D Y L FG DEA K+F +M DC P TYTSLIN V EA
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L EM G EPN+ +SL+ K R+ +++F ++ G P+
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA--CASTCSVPHKAVEWFEK 236
Y L + E A K + M + G+ P + + + L+ C + +V ++ F +
Sbjct: 124 YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTV-DAGLKIFLE 182
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
MP C+PD ++I R G +D A L+ + V +++LI S N
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
D + +MK G +PN+ TY++L+ + + R+ A ++E M+ G PN TY
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ C+ + ++A+ + M +G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQG----------------------------------- 327
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+PD Y +I+ + + K EA L+EMI G PN LT +H+ K +++V
Sbjct: 328 -LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN--RLTWNIHV----KTSNEV 380
Query: 477 VK 478
V+
Sbjct: 381 VR 382
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 261 NVDMALSLYDRAKTE---KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+V+ +++++D A E + D +F ++ + + A + MK+ N V
Sbjct: 28 DVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKI----ENCV 83
Query: 318 TYNNLLYAM----GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
++L ++ GR R D+ ++ +M P+ Y +L A
Sbjct: 84 VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF 143
Query: 374 YKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
YK M+E G N+L +C + G D +KIF +M G C PD++TY +LI+
Sbjct: 144 YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG-CDPDSYTYGTLISGL 202
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G++ EA+ L EM+ P ++ TSL++ +K D+ ++ ++ GI P+
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPN 261
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 99/264 (37%), Gaps = 42/264 (15%)
Query: 173 ARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE 232
A VV Y + K+ A + +EM +G++PN+ T+S+L+ +A+E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
FE M + C P+ ++I + + A+ L DR
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR--------------------- 322
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN-- 350
M + G KP+ Y ++ + R+A +EM+ G +PN
Sbjct: 323 --------------MNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 351 -WPTYAALLQAYCRARCS---EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
W + R C+ A ++Y M+ +G V+ L G +A+
Sbjct: 369 TWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428
Query: 407 KIFADMKSSGDCQPDNFTYTSLIN 430
++ ++ + G C P T+ LI
Sbjct: 429 QLVDEIVTDG-CIPSKGTWKLLIG 451
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 2/335 (0%)
Query: 150 LDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKP 209
L + +PE AL F + Q++ Y+ + + ++F +++ + R V+
Sbjct: 56 LKEIEDPEEALSLFHQY-QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC 114
Query: 210 NLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY 269
F L+ KA++ F K+ SF+C ++I V G ++ A S +
Sbjct: 115 RESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRA 329
D AK + R ++V+F+ LIK + +++A V+ +M + +P++VTYN+L+ + R
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 330 KRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY 389
AK++ E+M+K PN T+ L++ C +A + +M+ +G V Y
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 390 NMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI 449
+L G DEA + +MK +PD Y L+N +V EA +L EM
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKR-RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 450 RCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
G +PN ++ + + + D + + N +L
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML 388
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 36/253 (14%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V +N+ +K F + D+ A K+FDEML+ V+P+++T+++L+
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG----------------- 229
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
F C DD + A SL + ++ R + V F L+K G
Sbjct: 230 ---FLCRNDD---------------MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
Y+ + DM+ G KP +V Y L+ +G+ R +AK + EM K P+ Y
Sbjct: 272 YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ C +A V EM+ KG + Y M+ D + D + + M +S
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 417 DCQPDNFTYTSLI 429
C P T+ ++
Sbjct: 392 HC-PTPATFVCMV 403
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 15/272 (5%)
Query: 132 MLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKD 191
+L+KG + A V D M+ E ++P+ VV YN + D
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEME------------VQPS--VVTYNSLIGFLCRNDD 236
Query: 192 FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS 251
G+A+ L ++M+++ ++PN +TF L+ ++A + M C+P
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
++ + G +D A L K + + D V ++ L+ V ++M++ G
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
KPN TY ++ R + + M+ + P T+ ++ + + A
Sbjct: 357 CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC 416
Query: 372 SVYKEMKEKGKDVDKVLY-NMLFDMCAHFGNA 402
V + M +K + N+L D+C G
Sbjct: 417 FVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A DEM++RG+KP+ T+S L+ + +A+++++ PD
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+ MI + + +D ++ + +TV ++ LI+ Y SG L + DMK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G PN TY +L+ M R +AK ++EEM G PN Y AL+ Y +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
+ +EM K +K+ Y ++ A GN EA ++ +M+ G PD+ TY I
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFI 792
Query: 430 NMYSCMGKVTEA 441
Y G V EA
Sbjct: 793 YGYLKQGGVLEA 804
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 36/348 (10%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN +K + + AE+L EML G N +F++++ + + A+ + +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
P L ++I + G AL L+ + + + VDT +AL+ +G D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN-------- 350
+ ++ G + V+YN L+ K+ +A +EMVK G P+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 351 ---------------WP------------TYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
W TY+ ++ C+A +E+ + EM K
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+ V+YN L G A+++ DMK G P++ TYTSLI S + +V EA+
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L EM G EPN+ T+L+ YGK + V + ++ + P+
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 1/316 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
++ Y++ +K K G A + EM ++G PN+I ++ L+ +KA+E +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M S + ++I Y + G D A L + + V+ +F+++I +
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+D+ L +M + P L+ + + + A ++ + + GF + T
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
ALL C A ++A + KE+ +G +D+V YN L C DEA +M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G +PDN+TY+ LI M KV EA ++ R G P++ + ++ KA+R ++
Sbjct: 570 G-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 476 VVKIFNQLLDLGISPD 491
+ F++++ + P+
Sbjct: 629 GQEFFDEMMSKNVQPN 644
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 2/306 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +F + +G+ P+ T + L+ + K E F+ + PD L + I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ + G V+ A+ L+ + + + V F+ +I GM G YD M G +P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++TY+ L+ + RAKR DA + +EM K GF PN Y L+ ++ A A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
M KG + YN L G AD A ++ +M S G + ++TS+I +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFTSVICLLCS 447
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRF 494
A + EM+ P LT+L+ K + ++++ Q L+ G D R
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 495 CDCLLY 500
+ LL+
Sbjct: 508 SNALLH 513
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALI-KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
+D A D + D +S LI ++ M+ +A + + D K G P++ TY+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA-IQFWDDCKRNGMLPDVYTYS 614
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
++ +A+R + + ++EM+ PN Y L++AYCR+ AL + ++MK K
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
G + Y L + +EA +F +M+ G +P+ F YT+LI+ Y +G++ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVK 733
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
E LL EM PN + T ++ Y + + ++ N++ + GI PD
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 1/290 (0%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N L E A ++ E+L RG + ++++TL++ +A + ++M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
+PD+ + +I + V+ A+ +D K D +S +I + +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
+ +M +PN V YN+L+ A R+ R A + E+M G SPN TY +L++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
E+A +++EM+ +G + + Y L D G + + +M S +
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVH 747
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
P+ TYT +I Y+ G VTEA LLNEM G P+ + ++ Y K
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 138/331 (41%), Gaps = 40/331 (12%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
AF+ + + P V L+ + F + A KLF +M + GV PN++TF+T++
Sbjct: 248 AFDVVCKGVSP--DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
C +A + EKM EP
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEP-----------------------------------TL 330
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
+ +S L+K + V +M G PN++ YNNL+ + A A I +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY-NMLFDMCAHFG 400
MV G S TY L++ YC+ +++A + KEM G +V++ + +++ +C+H
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL- 449
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
D A++ +M + P T+LI+ GK ++A L + + GF +
Sbjct: 450 MFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+L+H +A + D+ +I ++L G D
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K A DEM++RG+KP+ T+S L+ + +A+++++ PD
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+ MI + + +D ++ + +TV ++ LI+ Y SG L + DMK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G PN TY +L+ M R +AK ++EEM G PN Y AL+ Y +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
+ +EM K +K+ Y ++ A GN EA ++ +M+ G PD+ TY I
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFI 792
Query: 430 NMYSCMGKVTEA 441
Y G V EA
Sbjct: 793 YGYLKQGGVLEA 804
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 36/348 (10%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN +K + + AE+L EML G N +F++++ + + A+ + +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
P L ++I + G AL L+ + + + VDT +AL+ +G D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN-------- 350
+ ++ G + V+YN L+ K+ +A +EMVK G P+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 351 ---------------WP------------TYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
W TY+ ++ C+A +E+ + EM K
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+ V+YN L G A+++ DMK G P++ TYTSLI S + +V EA+
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L EM G EPN+ T+L+ YGK + V + ++ + P+
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 1/316 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
++ Y++ +K K G A + EM ++G PN+I ++ L+ +KA+E +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M S + ++I Y + G D A L + + V+ +F+++I +
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+D+ L +M + P L+ + + + A ++ + + GF + T
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
ALL C A ++A + KE+ +G +D+V YN L C DEA +M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G +PDN+TY+ LI M KV EA ++ R G P++ + ++ KA+R ++
Sbjct: 570 G-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 476 VVKIFNQLLDLGISPD 491
+ F++++ + P+
Sbjct: 629 GQEFFDEMMSKNVQPN 644
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 2/306 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +F + +G+ P+ T + L+ + K E F+ + PD L + I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ + G V+ A+ L+ + + + V F+ +I GM G YD M G +P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++TY+ L+ + RAKR DA + +EM K GF PN Y L+ ++ A A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
M KG + YN L G AD A ++ +M S G + ++TS+I +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFTSVICLLCS 447
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRF 494
A + EM+ P LT+L+ K + ++++ Q L+ G D R
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 495 CDCLLY 500
+ LL+
Sbjct: 508 SNALLH 513
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALI-KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
+D A D + D +S LI ++ M+ +A + + D K G P++ TY+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA-IQFWDDCKRNGMLPDVYTYS 614
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
++ +A+R + + ++EM+ PN Y L++AYCR+ AL + ++MK K
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
G + Y L + +EA +F +M+ G +P+ F YT+LI+ Y +G++ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVK 733
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
E LL EM PN + T ++ Y + + ++ N++ + GI PD
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 1/290 (0%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N L E A ++ E+L RG + ++++TL++ +A + ++M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
+PD+ + +I + V+ A+ +D K D +S +I + +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
+ +M +PN V YN+L+ A R+ R A + E+M G SPN TY +L++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
E+A +++EM+ +G + + Y L D G + + +M S +
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVH 747
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
P+ TYT +I Y+ G VTEA LLNEM G P+ + ++ Y K
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 138/331 (41%), Gaps = 40/331 (12%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
AF+ + + P V L+ + F + A KLF +M + GV PN++TF+T++
Sbjct: 248 AFDVVCKGVSP--DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
C +A + EKM EP
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEP-----------------------------------TL 330
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
+ +S L+K + V +M G PN++ YNNL+ + A A I +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY-NMLFDMCAHFG 400
MV G S TY L++ YC+ +++A + KEM G +V++ + +++ +C+H
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL- 449
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
D A++ +M + P T+LI+ GK ++A L + + GF +
Sbjct: 450 MFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+L+H +A + D+ +I ++L G D
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 3/305 (0%)
Query: 160 LLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
LL + K+ I P V YN + F A +L +EML G+ PN +TF+ L+
Sbjct: 324 LLLRDMRKRMIHPNE--VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+ +A++ F M + P + ++ + D+A Y R K V
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ ++ +I +G D + + ++M G P++VTY+ L+ + R + AK I
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+ + G SPN Y+ L+ CR C ++A+ +Y+ M +G D +N+L
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G EA + M S G P+ ++ LIN Y G+ +A ++ +EM + G P
Sbjct: 562 GKVAEAEEFMRCMTSDG-ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620
Query: 460 LTSLV 464
SL+
Sbjct: 621 YGSLL 625
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 154/380 (40%), Gaps = 39/380 (10%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPARH---VVLYNVTLKLFREIKDFGRAEKLFDEMLQR 205
+L N++ E + Y QK++ + + +V YN L + + F A +L D M +
Sbjct: 238 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297
Query: 206 GV-----------------------------------KPNLITFSTLVACASTCSVPHKA 230
GV PN +T++TL+ S A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ +M SF P+ ++I + GN AL ++ + + V++ L+
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ +D Y MK G +TY ++ + + +A + EM K+G P+
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
TY+AL+ +C+ + A + + G + ++Y+ L C G EA++I+
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
M G + D+FT+ L+ GKV EAE + M G PN ++ L++ YG +
Sbjct: 538 AMILEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 471 KRADDVVKIFNQLLDLGISP 490
+F+++ +G P
Sbjct: 597 GEGLKAFSVFDEMTKVGHHP 616
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 141/337 (41%), Gaps = 38/337 (11%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E K+KI P V +N+ + + F ++ L +M + G P ++T++T+
Sbjct: 223 EMLKRKICP--DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV------ 274
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+ W Y + G A+ L D K++ D
Sbjct: 275 -------LHW----------------------YCKKGRFKAAIELLDHMKSKGVDADVCT 305
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI S + DM+ PN VTYN L+ + A + EM+
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
G SPN T+ AL+ + ++AL ++ M+ KG +V Y +L D D
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
A + MK +G C TYT +I+ G + EA LLNEM + G +P+I+ ++L
Sbjct: 426 LARGFYMRMKRNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
++ + K R +I ++ +G+SP+ L+Y
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 2/295 (0%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
L +EM + G+ P+++T+S L+ A E ++ P+ + +++IY
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
R+G + A+ +Y+ E D F+ L+ +G M G PN V
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
+++ L+ G + A ++++EM K G P + TY +LL+ C+ +A K +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
VD V+YN L GN +A+ +F +M PD++TYTSLI+ GK
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLISGLCRKGK 703
Query: 438 VTEAEALLNEM-IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
A E R PN + T V KA + + Q+ +LG +PD
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 169/416 (40%), Gaps = 53/416 (12%)
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDF 192
++ GL +N EA+++L+ M K I P +V Y+ + F ++ F
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMS------------KDGIDP--DIVTYSALINGFCKVGRF 494
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
A+++ + + G+ PN I +STL+ +A+ +E M E D+ + ++
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTRDHFTFNV 553
Query: 253 IYV-YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
+ + G V A ++ +TV+F LI YG SG SV+ +M +G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAK----------------------------------- 336
P TY +LL + + R+A+
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV-DKVLYNMLFDM 395
+++ EMV+ P+ TY +L+ CR + A+ KE + +G + +KV+Y D
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 733
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
G + M + G PD T ++I+ YS MGK+ + LL EM P
Sbjct: 734 MFKAGQWKAGIYFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 792
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELG 511
N+ L+H Y K K ++ ++ GI PD C L+ + E+G
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 119/291 (40%), Gaps = 6/291 (2%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
+ A V+YN L + + +A LF EM+QR + P+ T+++L++ C
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS--GLCRKG 702
Query: 228 HKAVEWF---EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
+ E P+ + + + G + ++ D V
Sbjct: 703 KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 762
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+A+I Y G + + +M PN+ TYN LL+ + K + +Y ++
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
NG P+ T +L+ C + E L + K +G +VD+ +NML C G +
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
A + M S G D T +++++ + + E+ +L+EM + G P
Sbjct: 883 AFDLVKVMTSLG-ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 932
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 10/306 (3%)
Query: 165 YFKQKIKPARH---VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
YF++++ H +V N + + + + L EM + PNL T++ L+
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
S + + + PD S++ +++ L + VD
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 864
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
F+ LI +G + + M LG + T + ++ + R R ++++ + E
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M K G SP Y L+ CR + A V +EM V + + A G
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 402 ADEA---MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
ADEA ++ MK P ++T+L+++ G V EA L M CG + +++
Sbjct: 985 ADEATLLLRFMLKMK----LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 459 ALTSLV 464
+ L+
Sbjct: 1041 SYNVLI 1046
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 138/302 (45%), Gaps = 11/302 (3%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
E ++ EM++R ++PN+ TF+ ++ +KA + E M + C P+ ++I
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDT------VAFSALIKMYGMSGNYDACLSVYSDMK 308
Y ++G +Y K V+ F+ LI + N + V+ +M
Sbjct: 267 GYCKLGGNG---KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
KPN+++YN+L+ + + +A ++ ++MV G PN TY AL+ +C+ +
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
+AL ++ +K +G +YNML D G D+ + +M+ G PD TY L
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG-IVPDVGTYNCL 442
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I G + A+ L +++ G P+++ L+ Y + + + ++ +G+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 489 SP 490
P
Sbjct: 502 KP 503
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 3/293 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E + + P ++ +N+ + F + + + K+F EML + VKPN+I++++L+
Sbjct: 286 EMVENDVSP--NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+A+ +KM S +P+ ++I + + + AL ++ K + T
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI Y G D ++ +M+ G P++ TYN L+ + R AK +++++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
G P+ T+ L++ YCR S A + KEM + G + YN++ GN
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
A + M+ + + +Y L+ YS GK+ +A LLNEM+ G PN
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 23/273 (8%)
Query: 236 KMPSFECEP------DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
K+ + C+P +N SA + YVY + K + + F+ +I
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEM-------------IRRKIQPNVFTFNVVIN 231
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA---MGRAKRARDAKTIYEEMVKNG 346
+G + V DMKV G PN+V+YN L+ +G + A + +EMV+N
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
SPN T+ L+ + + ++ V+KEM ++ + + YN L + + G EA+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+ M S+G QP+ TY +LIN + + EA + + G P L+
Sbjct: 352 SMRDKMVSAG-VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
Y K + DD + ++ GI PD +CL+
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 39/265 (14%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E Q +KP +V+ YN + A + D+M+ GV+PNLIT++ L+
Sbjct: 321 EMLDQDVKP--NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+ +A++ F + P + +I Y ++G +D +L + + E D
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI +GN +A ++ + G P++VT++ L+ R +R A + +EM
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 344 KNGFSP------------------------------------NWPTYAALLQAYCRARCS 367
K G P N +Y LLQ Y +
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 368 EDALSVYKEMKEKGKDVDKVLYNML 392
EDA + EM EKG +++ Y ++
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIV 582
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 158/324 (48%), Gaps = 7/324 (2%)
Query: 202 MLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGN 261
M++ G +P+++TF+TL+ +A+ ++M +P ++I ++G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 262 VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
+ AL+L + + + V ++A+I G++ +++++M G P+++TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
++ + R+ R DA+ + +M++ +P+ T++AL+ A + +A +Y +M +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+ YN + D ++A ++ M +S C PD T+++LIN Y +V
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSM-ASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYV 501
+ EM R G N + T+L+H + + D + N ++ G++P+ +L
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML-- 293
Query: 502 ATQIPRQELGKITACIEKAKPKLG 525
A+ ++EL K A +E + G
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEG 317
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 36/274 (13%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
HVV+YN + + A+ LF EM +G+ P++IT+S
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS------------------- 115
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
MI + R G A L + D V FSALI
Sbjct: 116 ----------------GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G +Y DM G P +TYN+++ + R DAK + + M SP+ T+
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+ L+ YC+A+ ++ + ++ EM +G + V Y L G+ D A + M S
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
SG P+ T+ S++ ++ +A A+L ++
Sbjct: 280 SG-VAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 110/279 (39%), Gaps = 42/279 (15%)
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G +P++VT+ L+ + R A + + MV+ G P Y ++ C+ +E A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG-------------- 416
L++ +M+E V+YN + D G+ A +F +M G
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 417 --------------------DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
PD T+++LIN GKV+EAE + +M+R G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITAC 516
+ S++ + K R +D ++ + + SPD L+ + R + G C
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 517 IEKAKPKLGSVVRYLTEEHE----GDGDFRKEALELFNS 551
+ + + V Y T H GD D ++ L + S
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ Y+ + F + AE+L +M++R + P+++TFS L+ +A E +
Sbjct: 111 VITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M P SMI + + ++ A + D ++ D V FS LI Y +
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D + ++ +M G N VTY L++ + A+ + M+ +G +PN+ T+
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Query: 356 ALLQAYCRARCSEDALSVYKEMKE 379
++L + C + A ++ +++++
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQK 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
+ +++I P VV ++ + + AE+++ +ML+RG+ P IT+++++
Sbjct: 136 DMIERQINP--DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK 193
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+ A + M S C PD +++I Y + VD + ++ +TV
Sbjct: 194 QDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 253
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ LI + G+ DA + + M G PN +T+ ++L ++ K R A I E++
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Query: 344 KN 345
K+
Sbjct: 314 KS 315
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 2/313 (0%)
Query: 155 NPETALLAFEYFKQKIKPARH-VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT 213
+ E L F Y+ + RH ++Y L++ + K + ++ M +RG+
Sbjct: 185 DDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEA 244
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
FS ++ S A++ M EP+ + + I V+ R ++ AL +R +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
+ V ++ +I+ Y + + + DM G P+ V+Y ++ + + KR
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 334 DAKTIYEEMVK-NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
+ + + ++M K +G P+ TY L+ + +++AL K+ +EKG +DK+ Y+ +
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
G EA + +M S G C PD TYT+++N + +G+V +A+ LL M G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 453 FEPNILALTSLVH 465
+PN ++ T+L++
Sbjct: 485 HKPNTVSYTALLN 497
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 142/315 (45%), Gaps = 3/315 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
++++ N T+ +F +A + + M G+ PN++T++ ++ +A+E
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 235 EKMPSFECEPDD-NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
E M S C PD + M Y+ V++ + AK D V ++ LI M
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP-NWP 352
+ D L D + G + + + Y+ +++A+ + R +AK + EM+ G P +
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
TY A++ +CR + A + + M G + V Y L + G + EA ++ +M
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM-NM 514
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
P++ TY+ +++ GK++EA ++ EM+ GF P + + L+ + R
Sbjct: 515 SEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 574
Query: 473 ADDVVKIFNQLLDLG 487
+ K + L+ G
Sbjct: 575 THEARKFMEECLNKG 589
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 195 AEKLFDEMLQRG-VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
A+ L +EML +G P+++T++ +V
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNG--------------------------------- 463
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ R+G VD A L T + +TV+++AL+ +G + + +
Sbjct: 464 --FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
PN +TY+ +++ + R + +A + EMV GF P LLQ+ CR + +A
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+E KG ++ V + + D A+ + DM D FTYT+L++
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK-HADVFTYTTLVDTLG 640
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
G++ EA L+ +M+ G +P + +++H Y + + DD+V I +++
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%)
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
AFS ++ Y +G L V + M+ G +PN++ N + RA R A E M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
G PN TY +++ YC E+A+ + ++M KG DKV Y +
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
E + M PD TY +LI+M + EA L + GF + L ++
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+VH K R + + N++L G P D
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPD 453
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 18/315 (5%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFD-----EMLQR-GVKPNLITFSTLVACASTCSVPHKAV 231
+Y R + + RA +L D ++QR GV+PNL+ +T + + KA+
Sbjct: 238 IYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKAL 297
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ E+M P+ MI Y + V+ A+ L + ++ D V++ ++
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM--- 354
Query: 292 GMSGNYDACLSVYSDMKVL----GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
G + V MK + G P+ VTYN L++ + + A +A ++ + GF
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGF 414
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADEAM 406
+ Y+A++ A C+ +A + EM KG D V Y + + G D+A
Sbjct: 415 RIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK 474
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH- 465
K+ M + G +P+ +YT+L+N GK EA ++N + PN + + ++H
Sbjct: 475 KLLQVMHTHGH-KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHG 533
Query: 466 --LYGKAKRADDVVK 478
GK A DVV+
Sbjct: 534 LRREGKLSEACDVVR 548
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 131/358 (36%), Gaps = 73/358 (20%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y + F + + +A+KL M G KPN ++++ L+ +A E
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNV--------DMAL---------------SLYDRA 272
P+ + +++ R G + +M L SL
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 573
Query: 273 KTEKWR------------VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
+T + R ++ V F+ +I + + DA LSV DM ++ ++ TY
Sbjct: 574 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 633
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
L+ +G+ R +A + ++M+ G P TY ++ YC+
Sbjct: 634 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ----------------- 676
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
G D+ + I M S C+ Y +I +GK+ E
Sbjct: 677 ------------------MGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEE 715
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCL 498
A+ LL +++R + +L+ Y K K+ ++ + + PD + C+ L
Sbjct: 716 ADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 41/368 (11%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKD--FGRAEKLFDEMLQRGVKPNLITFSTLV 218
LA E+ + + RH+ ++L + + D F + +L M G++P+++ F+ +
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
+A K+ F D +S+I + ++G + A+ L + + R
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLR 370
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+ +S+ + +G+ +++ ++ LG P+ V Y ++ R A
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ ++K+G P+ T L+ A R DA SV++ MK +G +D V YN L
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
++ ++ +M+S+G PD TY LI+ G + EA +++E+IR GF P+ L
Sbjct: 491 THQLNKVFELIDEMRSAG-ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
Query: 459 ALT-----------------------------------SLVHLYGKAKRADDVVKIFNQL 483
A T +L+H Y KA+R + + +FN+L
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 484 LDLGISPD 491
LD G+ PD
Sbjct: 610 LDAGLKPD 617
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
PE A+ F+ ++P ++ +Y+ L D RA +F E+ + G+ P+ + ++
Sbjct: 357 PEEAIKLIHSFR--LRP--NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
T++ KA ++F + P S +I +R G++ A S++ KTE
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
++D V ++ L+ YG + + + +M+ G P++ TYN L+++M +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
I E+++ GF P+ + ++ + + ++A ++ M + D V + L
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHG 592
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
++A+ +F + +G +PD Y +LI+ Y +G + +A L+ M++ G P
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAG-LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 456 N 456
N
Sbjct: 652 N 652
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 35/326 (10%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
LF+ + R V + FS L+ C + A++ K+ F P + S++
Sbjct: 190 LFETRIDRRVLETV--FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEIL 247
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
R+ +++A + + ++ S I+ Y G +D + MK G +P++V
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFS----------------------------- 348
+ + + +A ++A ++ ++ G S
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 349 ---PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
PN Y++ L C A ++++E+ E G D V Y + D + G D+A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ F + SG+ P T T LI S G +++AE++ M G + +++ +L+H
Sbjct: 428 FQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPD 491
YGK + + V ++ +++ GISPD
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPD 512
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 14/251 (5%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFK 167
T + L S NP S +L+ + +A V NM L
Sbjct: 424 TDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL------- 476
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
VV YN + + + + +L DEM G+ P++ T++ L+
Sbjct: 477 -------DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+A E ++ P +I +++ G+ A L+ + + D V SAL
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
+ Y + + + +++ + G KP++V YN L++ A + MV+ G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 348 SPNWPTYAALL 358
PN T+ AL+
Sbjct: 650 LPNESTHHALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 41/368 (11%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKD--FGRAEKLFDEMLQRGVKPNLITFSTLV 218
LA E+ + + RH+ ++L + + D F + +L M G++P+++ F+ +
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
+A K+ F D +S+I + ++G + A+ L + + R
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLR 370
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+ +S+ + +G+ +++ ++ LG P+ V Y ++ R A
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ ++K+G P+ T L+ A R DA SV++ MK +G +D V YN L
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
++ ++ +M+S+G PD TY LI+ G + EA +++E+IR GF P+ L
Sbjct: 491 THQLNKVFELIDEMRSAG-ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
Query: 459 ALT-----------------------------------SLVHLYGKAKRADDVVKIFNQL 483
A T +L+H Y KA+R + + +FN+L
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 484 LDLGISPD 491
LD G+ PD
Sbjct: 610 LDAGLKPD 617
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
PE A+ F+ ++P ++ +Y+ L D RA +F E+ + G+ P+ + ++
Sbjct: 357 PEEAIKLIHSFR--LRP--NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
T++ KA ++F + P S +I +R G++ A S++ KTE
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
++D V ++ L+ YG + + + +M+ G P++ TYN L+++M +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
I E+++ GF P+ + ++ + + ++A ++ M + D V + L
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHG 592
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
++A+ +F + +G +PD Y +LI+ Y +G + +A L+ M++ G P
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAG-LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 456 N 456
N
Sbjct: 652 N 652
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 35/326 (10%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
LF+ + R V + FS L+ C + A++ K+ F P + S++
Sbjct: 190 LFETRIDRRVLETV--FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEIL 247
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
R+ +++A + + ++ S I+ Y G +D + MK G +P++V
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFS----------------------------- 348
+ + + +A ++A ++ ++ G S
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 349 ---PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
PN Y++ L C A ++++E+ E G D V Y + D + G D+A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ F + SG+ P T T LI S G +++AE++ M G + +++ +L+H
Sbjct: 428 FQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPD 491
YGK + + V ++ +++ GISPD
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPD 512
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 14/251 (5%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFK 167
T + L S NP S +L+ + +A V NM L
Sbjct: 424 TDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL------- 476
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
VV YN + + + + +L DEM G+ P++ T++ L+
Sbjct: 477 -------DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+A E ++ P +I +++ G+ A L+ + + D V SAL
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
+ Y + + + +++ + G KP++V YN L++ A + MV+ G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 348 SPNWPTYAALL 358
PN T+ AL+
Sbjct: 650 LPNESTHHALV 660
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 3/296 (1%)
Query: 199 FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYAR 258
+ ++ G KPN+ + L+ + KA+ E M S PD + ++ +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
GNV A+ L ++ + + +TV ++AL++ M G+ + L + G PN T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
Y+ LL A + + +A + +E++ G PN +Y LL +C+ ++DA+++++E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
KG + V YN+L G +EA + A+M GD P TY LIN + G+
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM-DGGDRAPSVVTYNILINSLAFHGRT 332
Query: 439 TEAEALLNEMIRCGFEPNILALT--SLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+A +L EM + + + A + ++ K + D VVK ++++ P++
Sbjct: 333 EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 6/313 (1%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ V YN ++ + ++ + + ++Q+G+ PN T+S L+ A +AV+
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+++ EP+ ++ + + G D A++L+ + ++ + V+++ L++
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG--FSPNWP 352
G ++ S+ ++M P++VTYN L+ ++ R A + +EM K F
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
+Y ++ C+ + + EM + ++ YN + +C H EA I +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH---LYGK 469
+ C +F Y S+I G A LL EM RCGF+P+ ++L+ L G
Sbjct: 415 SNKQKCCTHDF-YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 470 AKRADDVVKIFNQ 482
A +V+ I +
Sbjct: 474 FTGAMEVLSIMEE 486
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE-----CEPDDNLSAS 251
K DEM+ R KPN T++ A S C K E F + S C D S
Sbjct: 374 KCLDEMIYRRCKPNEGTYN---AIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD--FYKS 428
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK-VL 310
+I R GN A L + D +SALI+ + G + + V S M+
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE 488
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
KP + +N ++ + + +R A ++E MV+ PN TYA L++ ED
Sbjct: 489 NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAH----EDE 544
Query: 371 LSVYKEM 377
L + KE+
Sbjct: 545 LELAKEV 551
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
D+ + E +V G PN LL C+A + A+ V + M G D Y L
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDN-FTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
+ GN AM++ M+ G P N TY +L+ +G + ++ + +++ G
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHG--YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
PN + L+ K + D+ VK+ ++++ G P+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 245
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 1/317 (0%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+VV+Y + + + +A+ LF EM + G+ N T++ L+ V + E +
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
EKM P+ ++ + G A ++D + + V ++ LI
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
+ V MK G PN++TYN L+ + A ++ ++ G SP+ TY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ +CR + A + KEM+E+G KV Y +L D A N ++A+++ M+
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
G PD TY+ LI+ + G++ EA L M+ EPN + +++ Y K +
Sbjct: 437 LG-LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 475 DVVKIFNQLLDLGISPD 491
+K+ ++ + ++P+
Sbjct: 496 RALKLLKEMEEKELAPN 512
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 161/344 (46%), Gaps = 11/344 (3%)
Query: 137 LGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGR-- 194
LG ER ++++ + FE +++ + LY + + KD GR
Sbjct: 227 LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD-GRTK 285
Query: 195 -AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
A ++FDEM +RGV N++T++TL+ ++A + ++M S P+ ++I
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ +G + ALSL K+ V ++ L+ + G+ + +M+ G K
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P+ VTY L+ R+ A + M + G P+ TY+ L+ +C +A +
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 374 YKEMKEKGKDVDKVLYN-MLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+K M EK + ++V+YN M+ C G++ A+K+ +M+ + P+ +Y +I +
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKE-GSSYRALKLLKEMEEK-ELAPNVASYRYMIEVL 523
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
K EAE L+ +MI G +P+ TS++ L +AK V
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPS----TSILSLISRAKNDSHV 563
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 136/303 (44%), Gaps = 4/303 (1%)
Query: 193 GRAEKLFD---EMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
G EK FD E+ + G PN++ ++TL+ KA + F +M ++
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+I + G +Y++ + + + ++ ++ G V+ +M+
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G N+VTYN L+ + R + +A + ++M +G +PN TY L+ +C
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
ALS+ +++K +G V YN+L G+ A K+ +M+ G +P TYT LI
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG-IKPSKVTYTILI 415
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
+ ++ + +A L M G P++ + L+H + + ++ ++F +++
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 490 PDD 492
P++
Sbjct: 476 PNE 478
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 20/322 (6%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
LY V + + + + + F+EM+ G P F+ L+ S ++ +F
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF--- 152
Query: 238 PSFECEPDDNLSASMIYVYA---------RIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
++N S ++ VY+ G ++ + L + + V ++ LI
Sbjct: 153 -------NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
G + ++ +M LG N TY L+ + + + +YE+M ++G
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
PN TY ++ C+ ++DA V+ EM+E+G + V YN L +EA K+
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
MKS G P+ TY +LI+ + +GK+ +A +L ++ G P+++ LV +
Sbjct: 326 VDQMKSDG-INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 469 KAKRADDVVKIFNQLLDLGISP 490
+ K+ ++ + GI P
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKP 406
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 153/338 (45%), Gaps = 6/338 (1%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
+ Y+ + + ++ A +LFDEM ++P ++TL+ KA++ FE+
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M C P +I + G VD A Y + D V + L+ + G G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAK-RARDAKTIYEEMVKNGFSPNWPTYA 355
+ +V+S+M + P +V+YN ++ A+ +K + + +++M + SP+ TY+
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ YC+ E AL + +EM EKG Y L + + A ++F ++K +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 416 -GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
G+ Y +I + GK++EA L NEM G P++ A +L+ KA +
Sbjct: 474 FGNVSSR--VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 475 DVVKIFNQLLDLGISPDDRFCDCLL--YVATQIPRQEL 510
+ + ++ + G D + +L + T +PR+ +
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI 569
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 170/379 (44%), Gaps = 31/379 (8%)
Query: 114 KLAKSLD--------SCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEY 165
K+ K+LD C+PT +E L+KGLG+ EA +M+
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTE-LIKGLGKAGRVDEAYGFYKDML----------- 330
Query: 166 FKQKIKPARHVVLYNVTLKLFREIKDFGRAEKL---FDEMLQRGVKPNLITFSTLV-ACA 221
+ + P VV N + + ++ GR E+L F EM P +++++T++ A
Sbjct: 331 -RDGLTP--DVVFLNNLMNILGKV---GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+ + + WF+KM + P + + +I Y + V+ AL L + + +
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
A+ +LI G + Y+A ++ ++K + Y ++ G+ + +A ++ E
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M G P+ Y AL+ +A +A S+ ++M+E G D +N++ + A G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
A+++F +K SG +PD TY +L+ ++ G EA ++ EM GFE + + +
Sbjct: 565 PRRAIEMFETIKHSG-IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 462 SLVHLYGKAKRADDVVKIF 480
S++ G D V F
Sbjct: 624 SILDAVGNVDHEKDDVSSF 642
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
V S L+K G + LSV+ K KP TYN+++ + + + +
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219
Query: 339 YEEMVKNGFS-PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
Y EM G P+ TY+AL+ +Y + ++ A+ ++ EMK+ + +Y L +
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
G ++A+ +F +MK +G C P +TYT LI G+V EA +M+R G P++
Sbjct: 280 KVGKVEKALDLFEEMKRAG-CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 458 LALTSLVHLYGKAKRADDVVKIFNQL 483
+ L +L+++ GK R +++ +F+++
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 4/192 (2%)
Query: 320 NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
+ L+ A+GRAK A +++ + P TY +++ + E VY EM
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 380 KGKDV-DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC-QPDNFTYTSLINMYSCMGK 437
+G D + Y+ L G D A+++F +MK +C QP YT+L+ +Y +GK
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD--NCMQPTEKIYTTLLGIYFKVGK 283
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
V +A L EM R G P + T L+ GKA R D+ + +L G++PD F +
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 498 LLYVATQIPRQE 509
L+ + ++ R E
Sbjct: 344 LMNILGKVGRVE 355
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 122/308 (39%), Gaps = 77/308 (25%)
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWR------------------------------- 278
+ ++ R V ALS++ +AK K +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 279 -----VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL---YAMGRAK 330
DT+ +SALI Y G D+ + ++ +MK +P Y LL + +G+ +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
+A D ++EEM + G SP TY L++ +A ++A YK+M G D V N
Sbjct: 286 KALD---LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 391 MLFDMCAHFGNADEAMKIFADM----------------------------------KSSG 416
L ++ G +E +F++M K
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 417 D-CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
D P FTY+ LI+ Y +V +A LL EM GF P A SL++ GKAKR +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 476 VVKIFNQL 483
++F +L
Sbjct: 463 ANELFKEL 470
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 148/315 (46%), Gaps = 3/315 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y K+ K +A LF+ ML G+KP + +++L++ + KA E M
Sbjct: 147 YTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK 206
Query: 239 SF-ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
S +C+PD +I ++G D+ S+ TV ++ +I YG +G +
Sbjct: 207 SVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMF 266
Query: 298 DACLSVYSDMKVLG-AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ SV +DM G + P++ T N+++ + G + R ++ Y G P+ T+
Sbjct: 267 EEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNI 326
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ ++ +A + SV M+++ + V YN++ + G ++ +F MK G
Sbjct: 327 LILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQG 386
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+P++ TY SL+N YS G V + +++L +++ + +++ YG+A +
Sbjct: 387 -VKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 445
Query: 477 VKIFNQLLDLGISPD 491
+++ Q+ + PD
Sbjct: 446 KELYIQMEERKCKPD 460
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 16/314 (5%)
Query: 195 AEKLFDEML-QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
A K+F+ + Q +P T++ L C P +A FE M S +P ++ S+I
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 254 YVYARIGNVDMALSLYDRAKT-EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
VY + +D A S + K+ + D F+ LI G +D S+ +M LG
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS-PNWPTYAALLQAYCRARCSEDAL 371
+ VTYN ++ G+A + +++ +M+++G S P+ T +++ +Y R
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF------TY 425
S Y + G D +N+L FG A ++ M S D F TY
Sbjct: 307 SWYSRFQLMGVQPDITTFNILI---LSFGKAG----MYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+I + G++ + + + +M G +PN + SLV+ Y KA + + Q+++
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN 419
Query: 486 LGISPDDRFCDCLL 499
+ D F +C++
Sbjct: 420 SDVVLDTPFFNCII 433
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 144/364 (39%), Gaps = 22/364 (6%)
Query: 100 LLKKS--YAATSSPLEKLAKSLDSCNPTEQQ---VSEMLVKGLGENVTEREAMI-VLDNM 153
LL+K Y KL K L +C +Q ML +GL + ++I V
Sbjct: 133 LLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKS 192
Query: 154 VNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT 213
+ A EY K V + V + ++ F + + EM GV + +T
Sbjct: 193 ELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVT 252
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECE--------PDDNLSASMIYVYARIGNVDMA 265
++T++ + FE+M S + PD S+I Y N+
Sbjct: 253 YNTIID-------GYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM 305
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
S Y R + + D F+ LI +G +G Y SV M+ VTYN ++
Sbjct: 306 ESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIET 365
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
G+A R ++ +M G PN TY +L+ AY +A SV +++ +D
Sbjct: 366 FGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLD 425
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+N + + G+ +++ M+ C+PD T+ ++I Y+ G + L
Sbjct: 426 TPFFNCIINAYGQAGDLATMKELYIQMEER-KCKPDKITFATMIKTYTAHGIFDAVQELE 484
Query: 446 NEMI 449
+MI
Sbjct: 485 KQMI 488
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK-PNLITFSTLVACASTCSVPHKAVEWFE 235
V YN + + + F E + +M++ G P++ T ++++ K W+
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ +PD +I + + G S+ D + + + TV ++ +I+ +G +G
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ V+ MK G KPN +TY +L+ A +A ++ ++V + + P +
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFN 430
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
++ AY +A +Y +M+E+ DK+ + + G D ++ M SS
Sbjct: 431 CIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISS 490
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 278 RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
+ D V +A++ GN+ +++++M G PN++TYN ++ + + R DA
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
+ M++ +P+ T++AL+ A+ + R +A +YKEM + YN + D
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
D+A ++ M S G C PD T+++LIN Y +V + EM R G N
Sbjct: 127 KQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 458 LALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACI 517
+ T+L+H + + D + N+++ G++PD C+L A ++EL K A +
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML--AGLCSKKELRKAFAIL 243
Query: 518 E 518
E
Sbjct: 244 E 244
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
+S +++ + GN A +L+ + + + ++ +I + SG + + M
Sbjct: 12 ISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHM 71
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
P++VT++ L+ A + ++ +A+ IY+EM++ P TY +++ +C+
Sbjct: 72 IEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRV 131
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+DA + M KG D V ++ L + D M+IF +M G + TYT+
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG-IVANTVTYTT 190
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
LI+ + +G + A+ LLNEMI CG P+ + + L G + ++ K F L DL
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM--LAGLCSKK-ELRKAFAILEDLQ 247
Query: 488 ISPDDRFCD 496
S D D
Sbjct: 248 KSEDHHLED 256
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 36/254 (14%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A+ LF EM ++G+ PN++T++ ++ S H W + D L MI
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMID-----SFCHSG-RWSDA---------DQLLRHMI- 72
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
++ D V FSALI + +Y +M P
Sbjct: 73 -------------------EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+TYN+++ + R DAK + + M G SP+ T++ L+ YC+A+ ++ + ++
Sbjct: 114 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
EM +G + V Y L G+ D A + +M S G PD T+ ++
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG-VAPDYITFHCMLAGLCS 232
Query: 435 MGKVTEAEALLNEM 448
++ +A A+L ++
Sbjct: 233 KKELRKAFAILEDL 246
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 152 NMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNL 211
N +N + L E ++ I P +V+ YN + F + A++L M+++ + P++
Sbjct: 25 NHINAQN--LFTEMHEKGIFP--NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 80
Query: 212 ITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR 271
+TFS L+ +A E +++M + P SMI + + VD A + D
Sbjct: 81 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 140
Query: 272 AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
++ D V FS LI Y + D + ++ +M G N VTY L++ +
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
A+ + EM+ G +P++ T+ +L C + A ++ +++++
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
A++ C+ +A +++ EM EKG + + YN + D H G +A ++ M
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
PD T+++LIN + KV+EAE + EM+R P + S++ + K R D
Sbjct: 74 K-QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 475 DVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVVRYLTEE 534
D ++ + + G SPD L+ + R + G C + + + V Y T
Sbjct: 133 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 535 H 535
H
Sbjct: 193 H 193
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 13/328 (3%)
Query: 173 ARHVVLYNVTLKLFREI-KDFGRAE------KLFDEMLQRGVKPNLITFSTLVACASTCS 225
AR + ++ K+F + + + RA + F+ M++ G+KP + L+ S C
Sbjct: 128 AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLH--SLCD 185
Query: 226 VPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
H A E+F K F P + ++ +ARI + A ++D VD +A
Sbjct: 186 KKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLA 245
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++AL+ SG+ D ++ +M LG KP+ ++ ++A A A + + M
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+ PN T+ +++ C+ +DA + EM +KG + D YN + +
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
A K+ + M + C PD TY ++ + +G+ A + M F P + T +
Sbjct: 366 RATKLLSRMDRT-KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVM 424
Query: 464 VH-LYGKAKRADDVVKIFNQLLDLGISP 490
+H L K + ++ + F ++D GI P
Sbjct: 425 IHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 9/288 (3%)
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
V NL+ L C + H+ W ++P F +L + I V + AL
Sbjct: 66 VSSNLVE-QVLKRCKNLGFPAHRFFLWARRIPDFA----HSLESYHILVEILGSSKQFAL 120
Query: 267 ---SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
L + + + + + F + + Y + ++ M G KP + + LL
Sbjct: 121 LWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLL 180
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
+++ K A+ + + G P+ TY+ L++ + R R + A V+ EM E+
Sbjct: 181 HSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCV 240
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
VD + YN L D G+ D K+F +M + G +PD +++ I+ Y G V A
Sbjct: 241 VDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG-LKPDAYSFAIFIHAYCDAGDVHSAYK 299
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+L+ M R PN+ ++ K ++ DD + ++++ G +PD
Sbjct: 300 VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 178/406 (43%), Gaps = 47/406 (11%)
Query: 148 IVLDNMVNPETA-LLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGR---AEKLFDEML 203
++L M+ E +LAF + + +K LY + L + GR A+K+FD+M
Sbjct: 167 VILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGI-LMDGLYKKGRTSDAQKMFDDMT 225
Query: 204 QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVD 263
RG+ PN +T++ L++ A + F +M + PD +++ + ++G +
Sbjct: 226 GRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMV 285
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
A L + + + + +S+LI + Y +Y++M KP+++ Y L+
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
+ +A + DA + M G SP+ Y A+++A C E+ S+ EM E
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 384 VDKVLYNMLF-DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
D + +L MC + G EA +IF +++ SG C P T+ +LI+ G++ EA
Sbjct: 406 PDACTHTILICSMCRN-GLVREAEEIFTEIEKSG-CSPSVATFNALIDGLCKSGELKEAR 463
Query: 443 ALLNEM---------IR------------------------------CGFEPNILALTSL 463
LL++M +R G P+I++ L
Sbjct: 464 LLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVL 523
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQE 509
++ + +A D +K+ N L G+SPD + L+ ++ R+E
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 35/293 (11%)
Query: 199 FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYAR 258
+E+ GV + F L++ + + KAVE F +M F+C PD ++ Y
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPD-------VFTYNV 167
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
I V M ++ + +VY++M PN+ T
Sbjct: 168 ILRVMMREEVF---------------------------FMLAFAVYNEMLKCNCSPNLYT 200
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+ L+ + + R DA+ ++++M G SPN TY L+ C+ ++DA ++ EM+
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
G D V +N L D G EA ++ + G Y+SLI+ +
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR-GYSSLIDGLFRARRY 319
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
T+A L M++ +P+I+ T L+ KA + +D +K+ + + GISPD
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 2/230 (0%)
Query: 263 DMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL 322
D+ + K+ VD+ F LI Y G + + + MK +P++ TYN +
Sbjct: 109 DLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI 168
Query: 323 LYAMGRAKR-ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
L M R + A +Y EM+K SPN T+ L+ + + DA ++ +M +G
Sbjct: 169 LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
++V Y +L G+AD+A K+F +M++SG+ PD+ + +L++ + +G++ EA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGN-YPDSVAHNALLDGFCKLGRMVEA 287
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
LL + GF + +SL+ +A+R +++ +L I PD
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 7/319 (2%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V +N L F ++ A +L + G L +S+L+ +A E +
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M +PD L +I ++ G ++ AL L ++ DT ++A+IK G
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ S+ +M + P+ T+ L+ +M R R+A+ I+ E+ K+G SP+ T+ A
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY-----NMLFDMCAHFGNADEAMKIFAD 411
L+ C++ ++A + +M E G+ L N FD G+ +A + A
Sbjct: 449 LIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
+G PD +Y LIN + G + A LLN + G P+ + +L++ +
Sbjct: 508 FADTGS-SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Query: 472 RADDVVKIFNQLLDLGISP 490
R ++ K+F D SP
Sbjct: 567 REEEAFKLFYAKDDFRHSP 585
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 153/356 (42%), Gaps = 38/356 (10%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
AE++F E+ + G P++ TF+ L+ +A KM + AS+
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-------EVGRPASLFL 479
Query: 255 VYARIGNVDMALSLYDRAKTEKWR-----------VDTVAFSALIKMYGMSGNYDACLSV 303
+ GN + + + +R D V+++ LI + +G+ D L +
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ +++ G P+ VTYN L+ + R R +A ++ K+ F + Y +L+ CR
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCR 597
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
R A +++ + +K +D N + + C G + A++ ++ D + D
Sbjct: 598 KRKVLVAFNLWMKYLKKISCLDDETANEI-EQCFKEGETERALRRLIEL----DTRKDEL 652
Query: 424 T---YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL----ALTSLVHLYGKAKRADDV 476
T YT + G+ EA ++ ++R E IL + L+H K ++ D
Sbjct: 653 TLGPYTIWLIGLCQSGRFHEA-LMVFSVLR---EKKILVTPPSCVKLIHGLCKREQLDAA 708
Query: 477 VKIFNQLLDLGISPDDRFCDCLL--YVATQIPRQELGKITACIEKAKPKLGSVVRY 530
+++F LD R C+ LL + + + + ++T +E+A + S++R+
Sbjct: 709 IEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSMLRF 764
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML------- 392
EE+ G S + + L+ AY + +E A+ + MKE D YN++
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE 175
Query: 393 --FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
F M A F +E +K +C P+ +T+ L++ G+ ++A+ + ++M
Sbjct: 176 EVFFMLA-FAVYNEMLKC--------NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTG 226
Query: 451 CGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD--------DRFC 495
G PN + T L+ + ADD K+F ++ G PD D FC
Sbjct: 227 RGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 147/315 (46%), Gaps = 2/315 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+N+ + + A +L +M + GV+P+ +T++ L + A E M
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA-FSALIKMYGMSGNY 297
PD ++ ++GN+DM L L + + ++++ S ++ +G
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
D LS+++ MK G P++V Y+ +++ + + + A +Y+EM PN T+ AL
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
L C+ +A S+ + G+ +D VLYN++ D A G +EA+++F + +G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG- 498
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
P T+ SLI Y + EA +L+ + G P++++ T+L+ Y +
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 478 KIFNQLLDLGISPDD 492
++ ++ GI P +
Sbjct: 559 ELRREMKAEGIPPTN 573
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 4/301 (1%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E LA + K ++P V YN+ K F + A ++ +ML +G+ P++IT++
Sbjct: 275 EALELASDMNKHGVEPDS--VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS-MIYVYARIGNVDMALSLYDRAKTE 275
L+ + + M S E + + S M+ + G +D ALSL+++ K +
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D VA+S +I G +D L +Y +M PN T+ LL + + +A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+++ + ++ +G + + Y ++ Y ++ C E+AL ++K + E G +N L
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
N EA KI +K G P +YT+L++ Y+ G + L EM G P
Sbjct: 513 YCKTQNIAEARKILDVIKLYG-LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 456 N 456
Sbjct: 572 T 572
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 13/283 (4%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L D ++ G +++ ++ ++ + +A+E F+ + P S+IY
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y + N+ A + D K V+++ L+ Y GN + + +MK G P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEE------------MVKNGFSPNWPTYAALLQAYC 362
VTY+ + + R + + + E M G P+ TY ++Q C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
R + A + MK + D YN+L D +G +A ++ +
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ-NVSLSK 690
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
F YT+LI + G A L ++++ GF +I +++++
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 146/335 (43%), Gaps = 20/335 (5%)
Query: 185 LFREIKD------------FGRAEKLFDEML------QRGVKPNLITFSTLVACASTCSV 226
+++EIKD R +KL D +L + + P++++F+++++
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
A +F + P +I +G++ AL L D+V ++
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
L K + + G V DM G P+++TY LL + + ++M+ G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 347 FSPNWPT-YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
F N + +L C+ ++ALS++ +MK G D V Y+++ G D A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ ++ +M P++ T+ +L+ G + EA +LL+ +I G +I+ ++
Sbjct: 418 LWLYDEM-CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
Y K+ ++ +++F +++ GI+P + L+Y
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 133/330 (40%), Gaps = 13/330 (3%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V Y++ + ++ F A L+DEM + + PN T L+ + +A +
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ S D L +I YA+ G ++ AL L+ F++LI Y +
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
N + +K+ G P++V+Y L+ A + + EM G P TY+
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 577
Query: 356 ALLQAYCRARCSEDALSVYKE------------MKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+ + CR E+ V +E M+ +G D++ YN + +
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
A +F ++ S + + TY LI+ G + +A++ + + + A T+L
Sbjct: 638 GAF-VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+ + + VK+F+QLL G + R
Sbjct: 697 IKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 22/301 (7%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF++M G+ P+L+ +S ++ A+ +++M P+ +++
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ G + A SL D + +D V ++ +I Y SG + L ++ + G P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++ T+N+L+Y + + +A+ I + + G +P+ +Y L+ AY ++ +
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 375 KEMKEKGKDVDKVLYNMLF---------DMCAH------FGNADEAMKIFADMKSSGDCQ 419
+EMK +G V Y+++F + C H F + ++ DM+S G
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR---DMESEG-IP 617
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH---LYGKAKRADDV 476
PD TY ++I + ++ A L M + + L+ +YG ++AD
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 477 V 477
+
Sbjct: 678 I 678
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 18/251 (7%)
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
L + KW + + L+ + D L + MK + +YN++LY
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 170
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK--EMKEKGKDVD 385
+ D +Y+E +K+ N TY+ ++ CR + EDA+ + E K+ G V
Sbjct: 171 ETDKMWD---VYKE-IKD---KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV- 222
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
V +N + G D A F + G P +++ LIN +G + EA L
Sbjct: 223 -VSFNSIMSGYCKLGFVDMAKSFFCTVLKCG-LVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 446 NEMIRCGFEPNILALTSLV---HLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
++M + G EP+ + L HL G A +V++ +LD G+SPD LL
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR---DMLDKGLSPDVITYTILLCGQ 337
Query: 503 TQIPRQELGKI 513
Q+ ++G +
Sbjct: 338 CQLGNIDMGLV 348
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 147/315 (46%), Gaps = 2/315 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+N+ + + A +L +M + GV+P+ +T++ L + A E M
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA-FSALIKMYGMSGNY 297
PD ++ ++GN+DM L L + + ++++ S ++ +G
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
D LS+++ MK G P++V Y+ +++ + + + A +Y+EM PN T+ AL
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
L C+ +A S+ + G+ +D VLYN++ D A G +EA+++F + +G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG- 498
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
P T+ SLI Y + EA +L+ + G P++++ T+L+ Y +
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 478 KIFNQLLDLGISPDD 492
++ ++ GI P +
Sbjct: 559 ELRREMKAEGIPPTN 573
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 4/301 (1%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
E LA + K ++P V YN+ K F + A ++ +ML +G+ P++IT++
Sbjct: 274 AEALELASDMNKHGVEPDS--VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS-MIYVYARIGNVDMALSLYDRAKT 274
L+ + + M S E + + S M+ + G +D ALSL+++ K
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
+ D VA+S +I G +D L +Y +M PN T+ LL + + +
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 451
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A+++ + ++ +G + + Y ++ Y ++ C E+AL ++K + E G +N L
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
N EA KI +K G P +YT+L++ Y+ G + L EM G
Sbjct: 512 GYCKTQNIAEARKILDVIKLYG-LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 455 P 455
P
Sbjct: 571 P 571
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 13/283 (4%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A L D ++ G +++ ++ ++ + +A+E F+ + P S+IY
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y + N+ A + D K V+++ L+ Y GN + + +MK G P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEE------------MVKNGFSPNWPTYAALLQAYC 362
VTY+ + + R + + + E M G P+ TY ++Q C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
R + A + MK + D YN+L D +G +A ++ +
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ-NVSLSK 690
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
F YT+LI + G A L ++++ GF +I +++++
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 146/335 (43%), Gaps = 20/335 (5%)
Query: 185 LFREIKD------------FGRAEKLFDEML------QRGVKPNLITFSTLVACASTCSV 226
+++EIKD R +KL D +L + + P++++F+++++
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
A +F + P +I +G++ AL L D+V ++
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
L K + + G V DM G P+++TY LL + + ++M+ G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 347 FSPNWPT-YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
F N + +L C+ ++ALS++ +MK G D V Y+++ G D A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ ++ +M P++ T+ +L+ G + EA +LL+ +I G +I+ ++
Sbjct: 418 LWLYDEM-CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
Y K+ ++ +++F +++ GI+P + L+Y
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 133/330 (40%), Gaps = 13/330 (3%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V Y++ + ++ F A L+DEM + + PN T L+ + +A +
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ S D L +I YA+ G ++ AL L+ F++LI Y +
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
N + +K+ G P++V+Y L+ A + + EM G P TY+
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYS 577
Query: 356 ALLQAYCRARCSEDALSVYKE------------MKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+ + CR E+ V +E M+ +G D++ YN + +
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
A +F ++ S + + TY LI+ G + +A++ + + + A T+L
Sbjct: 638 GAF-VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+ + + VK+F+QLL G + R
Sbjct: 697 IKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 22/301 (7%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A LF++M G+ P+L+ +S ++ A+ +++M P+ +++
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ G + A SL D + +D V ++ +I Y SG + L ++ + G P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++ T+N+L+Y + + +A+ I + + G +P+ +Y L+ AY ++ +
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 375 KEMKEKGKDVDKVLYNMLF---------DMCAH------FGNADEAMKIFADMKSSGDCQ 419
+EMK +G V Y+++F + C H F + ++ DM+S G
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR---DMESEG-IP 617
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH---LYGKAKRADDV 476
PD TY ++I + ++ A L M + + L+ +YG ++AD
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 477 V 477
+
Sbjct: 678 I 678
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 18/251 (7%)
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
L + KW + + L+ + D L + MK + +YN++LY
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 170
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK--EMKEKGKDVD 385
+ D +Y+E +K+ N TY+ ++ CR + EDA+ + E K+ G V
Sbjct: 171 ETDKMWD---VYKE-IKD---KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV- 222
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
V +N + G D A F + G P +++ LIN +G + EA L
Sbjct: 223 -VSFNSIMSGYCKLGFVDMAKSFFCTVLKCG-LVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 446 NEMIRCGFEPNILALTSLV---HLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
++M + G EP+ + L HL G A +V++ +LD G+SPD LL
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR---DMLDKGLSPDVITYTILLCGQ 337
Query: 503 TQIPRQELGKI 513
Q+ ++G +
Sbjct: 338 CQLGNIDMGLV 348
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 10/307 (3%)
Query: 190 KDFGRAEKL------FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECE 243
+ + RA K+ F +M + G K F+ ++ S A + F+KM E
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
PD ++ + + N+ + K E + D VA+ +I + + Y+ +
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+++M+ KP+ + +L+ +G K+ DA +E +GF PTY AL+ AYC
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
++ EDA EM+ KG + Y+++ + EA +++ M C+P
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM----SCEPTVS 405
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
TY ++ M+ ++ A + +EM G P + +SL+ + D+ + FN++
Sbjct: 406 TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Query: 484 LDLGISP 490
LD+GI P
Sbjct: 466 LDVGIRP 472
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y + L+ + + + R +++ EM G +P+++ + ++ +A+ +F +M
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 294
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
C+P ++ S+I ++ AL ++R+K+ + ++ ++AL+ Y S +
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 354
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+M++ G PN TY+ +L+ + R +R+++A +Y+ M P TY ++
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMV 411
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ +C + A+ ++ EMK KG +++ L H DEA + F +M G
Sbjct: 412 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG-I 470
Query: 419 QPDNFTYTSL 428
+P ++ L
Sbjct: 471 RPPGHMFSRL 480
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 4/276 (1%)
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+W E F+ N +A +I +I + SL D K +K + F+ + + Y
Sbjct: 116 KWAENQKGFK-HTTSNYNA-LIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRY 172
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
+ + + M+ G K +N +L + +++ DA+ ++++M K F P+
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
+Y LL+ + + V +EMK++G + D V Y ++ + +EA++ F +
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
M+ +C+P + SLIN K+ +A GF +LV Y ++
Sbjct: 293 MEQR-NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 472 RADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPR 507
R +D K +++ G+ P+ R D +L+ ++ R
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQR 387
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 9/317 (2%)
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV--PHKAVEWFEK-MPSFEC 242
F E + A ++ + M + V F + C + P A+ +FE + S
Sbjct: 144 FVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVL 203
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS 302
P+ +++ ++G VD L R + E + D V +S I Y G L
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALM 263
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
+M G ++V+Y+ L+ + + +A + +M+K G PN TY A+++ C
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
+ E+A ++ + G +VD+ LY L D GN + A + DM+ G QP
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG-IQPSI 382
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
TY ++IN G+V+EA+ + G +++ ++L+ Y K + D V++I +
Sbjct: 383 LTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRR 437
Query: 483 LLDLGISPDDRFCDCLL 499
L+ I D C+ LL
Sbjct: 438 FLEAKIPMDLVMCNILL 454
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 47/278 (16%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
R VV Y++ + + + A L +M++ GV+PNLIT++ ++ +A
Sbjct: 275 RDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL 334
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
F ++ S E D+ L ++I R GN++ A S+
Sbjct: 335 FNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM------------------------- 369
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
DM+ G +P+++TYN ++ + A R +A + V G + T
Sbjct: 370 ----------LGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVIT 414
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML---FDMCAHFGNADEAMKIFA 410
Y+ LL +Y + + + L + + E +D V+ N+L F + +G AD +
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMP 474
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
+M D PD TY ++I Y G++ EA + NE+
Sbjct: 475 EM----DLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 97/224 (43%), Gaps = 1/224 (0%)
Query: 261 NVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
++D L + + +T +D + ++ +I G L++ S K G N +TYN
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
+L+ + + +A +++ + G P+ TY L+ C+ DA + M K
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
G + ++YN + D G ++AM++ + K G PD FT +S+I Y G + E
Sbjct: 755 GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR-KMMGRVTPDAFTVSSMIKGYCKKGDMEE 813
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
A ++ E + L+ + R ++ + ++L
Sbjct: 814 ALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 3/294 (1%)
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALS 267
KPN+ + L+ C P KA E F++M + C + + +++ Y+R G D A +
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 268 LYDRAK-TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
L +R K + + D +S LIK + +D + SDM+ G +PN +TYN L+ A
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 327 GRAKRARDAKTIYEEMV-KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
G+AK + ++ +M+ ++ P+ T + L+A+ E + Y++ + G + +
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+N+L D GN + + M+ TY +I+ + G + + E L
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVMEYMQKY-HYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
M P+ + L SLV YG+A +AD + + + + I D F +CL+
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLV 439
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWF 234
V Y++ +K F ++ F + + L +M ++G++PN IT++TL+ A
Sbjct: 221 VHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLI 280
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+ + +C+PD S + + G ++M + Y++ ++ + F+ L+ YG S
Sbjct: 281 QMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKS 340
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
GNY +V M+ +VTYN ++ A GRA + + ++ M P+ T
Sbjct: 341 GNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTL 400
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+L++AY RA ++ V + ++ +D V +N L D E + M+
Sbjct: 401 CSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEK 460
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
G +PD TY +++ Y G T + L
Sbjct: 461 KG-FKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 147/339 (43%), Gaps = 7/339 (2%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E+A+ FE ++++ +V +Y + + + K +A +LF EM+ G N ++
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 217 LVACASTCSVPHKAVEWFEKM-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
LV+ S A E+M S C+PD + + +I + ++ D L + +
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA---KPNMVTYNNLLYAMGRAKRA 332
R +T+ ++ LI YG + + S +++LG KP+ T N+ L A G +
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTL--IQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
+ YE+ +G PN T+ LL +Y ++ + +V + M++ V YN++
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 368
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
D G+ + +F M+S P T SL+ Y K + +L +
Sbjct: 369 IDAFGRAGDLKQMEYLFRLMQSE-RIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+++ LV YG+ ++ ++ + + G PD
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPD 466
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALS 267
KP++++F++L S + + + M C P+ ++ I + + G + +AL
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
+ K + + V F+ LI Y +G+ + +S+Y +M+ + N+VTY L+
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
+ + A+ +Y MV++ PN Y ++ + + S++A+ +M +G +D
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
Y ++ G EA +I DM+ S D PD +T+++N Y G++ A + ++
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKS-DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
+I GFEP+++AL++++ K + + + F
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 159/344 (46%), Gaps = 9/344 (2%)
Query: 157 ETALLAFEYFKQ-KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
+ AL +F K+ + P +VV + + + + D A L+ EM + + N++T++
Sbjct: 180 QLALKSFHSMKRDALSP--NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L+ +A E + +M EP+ + ++I + + G+ D A+ + +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
R+D A+ +I +G + DM+ P+MV + ++ A ++ R + A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+Y ++++ GF P+ + ++ + +A+ + EK DV +Y +L D
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKANDV---MYTVLIDA 412
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
G+ E ++F+ + +G PD F YTS I G + +A L M++ G
Sbjct: 413 LCKEGDFIEVERLFSKISEAG-LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
++LA T+L++ + ++F+++L+ GISPD D L+
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 169/396 (42%), Gaps = 44/396 (11%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
K ++ RG P+ +F+++V+ A + MP F CEPD S+I +
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 257 ARIGNVDMALSLYDRAKTEKWRV---DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
R G++ A + + + + D V+F++L + D VY + +
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCS 160
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
PN+VTY+ + ++ + A + M ++ SPN T+ L+ YC+A E A+S+
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 374 YKEMKEKGKDVDKVLYNMLFD-MCA----------------------------------H 398
YKEM+ ++ V Y L D C
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G++D AMK A M + G + D Y +I+ GK+ EA ++ +M + P+++
Sbjct: 281 RGDSDNAMKFLAKMLNQG-MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIE 518
T++++ Y K+ R V ++++L++ G PD ++ + + + CIE
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 519 KAKPKLGSVVRYLTEEHEGDGDFRKEALELFNSIDD 554
KA + +V L + +GDF E LF+ I +
Sbjct: 400 KANDVMYTV---LIDALCKEGDF-IEVERLFSKISE 431
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 32/280 (11%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
+ +++P + ++Y + F + D A K +ML +G++ ++ + +++
Sbjct: 261 EDRVEP--NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
+A E E M + PD + +M+ Y + G + A+++Y + + D VA S
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 287 LIK-----------------------MYGM-------SGNYDACLSVYSDMKVLGAKPNM 316
+I MY + G++ ++S + G P+
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK 438
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
Y + + + + DA + MV+ G + Y L+ +A V+ E
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDE 498
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
M G D ++++L GN A + DM+ G
Sbjct: 499 MLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 144/329 (43%), Gaps = 15/329 (4%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
AFE F + P V + + L E +A+ L D M + GV+P + L+
Sbjct: 551 AFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAW 610
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+ KA E+FE + + + PD MI Y R+ A +L++ K + D
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
V +S L+ N D L + +M+ P++V Y ++ + ++++
Sbjct: 671 VTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M + P+ TY LL+ ++ ++ +EMK D Y +L D G+
Sbjct: 724 MKRREIVPDVVTYTVLLK-------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
EA +IF M SG PD YT+LI MG + EA+ + + MI G +P+++ T
Sbjct: 777 LGEAKRIFDQMIESG-VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYT 835
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+L+ + VK+ ++L+ GI P
Sbjct: 836 ALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 15/283 (5%)
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
P + F+ + + KA + ++M EP+ ++ +I + R+ NV A
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 269 YDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
++ T+K D ++ +I Y +++ DMK KP++VTY+ LL +
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 682
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
R EM P+ Y ++ YC + +++K+MK + D V
Sbjct: 683 LDMKR-------EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT 735
Query: 389 YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
Y +L N MK F D +PD F YT LI+ +G + EA+ + ++M
Sbjct: 736 YTVLLKNKPE-RNLSREMKAF-------DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQM 787
Query: 449 IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
I G +P+ T+L+ K + IF+++++ G+ PD
Sbjct: 788 IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
SV DM+ G P++ Y+ ++ + A ++ +M+K N +++LQ Y
Sbjct: 312 SVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCY 371
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
C+ +A ++KE +E +D+V YN+ FD G +EA+++F +M G PD
Sbjct: 372 CQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG-IAPD 430
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFN 481
YT+LI GK ++A L+ EM G P+I+ L A + +
Sbjct: 431 VINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Query: 482 QLLDLGISP 490
+ + G+ P
Sbjct: 491 MMENRGVKP 499
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M +PD + +++I + + N+ A+ ++++ ++ R++ V S++++ Y GN
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ ++ + + + V YN A+G+ + +A ++ EM G +P+ Y
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 357 LLQAYC-RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L+ C + +CS DA + EM GK D V+YN+L A G A EA + M++
Sbjct: 437 LIGGCCLQGKCS-DAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR 495
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
G +P T+ +I G++ +AEA
Sbjct: 496 G-VKPTYVTHNMVIEGLIDAGELDKAEAF 523
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 128/326 (39%), Gaps = 30/326 (9%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
AE + +M + G+ P++ +S ++ ++P KAV+ F KM + + +S++
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIP-KAVDVFNKMLKKRKRINCVIVSSIL 368
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
Y ++GN A L+ + +D V ++ G G + + ++ +M G
Sbjct: 369 QCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIA 428
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P+++ Y L+ + DA + EM G +P+ Y L +++A
Sbjct: 429 PDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFET 488
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS----------SGDCQ---- 419
K M+ +G V +NM+ + G D+A + ++ G C
Sbjct: 489 LKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCL 548
Query: 420 --------------PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
P + +T ++ + +++A+ LL+ M + G EP L+
Sbjct: 549 DHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIG 608
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPD 491
+ + + F L+ I PD
Sbjct: 609 AWCRVNNVRKAREFFEILVTKKIVPD 634
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 306 DMKVLGAKPNM-VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
D +L K ++ + Y ++ + R DA+++ +M K+G P+ Y+A+++ + +
Sbjct: 280 DANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKN 339
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
A+ V+ +M +K K ++ V+ + + GN EA +F + + + + D
Sbjct: 340 MNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRET-NISLDRVC 398
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
Y + +GKV EA L EM G P+++ T+L+ + D + ++
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 485 DLGISPD 491
G +PD
Sbjct: 459 GTGKTPD 465
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 130/339 (38%), Gaps = 40/339 (11%)
Query: 162 AFEYFKQKIKPARHV--VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + F + +K + + V+ + L+ + ++ +F A LF E + + + + ++
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A+E F +M PD ++I G A L
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D V ++ L +G M+ G KP VT+N ++ + A A+ Y
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDAL------------SVY----------KEM 377
E + + A++++ +C A C + A SVY K+
Sbjct: 525 ESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY 580
Query: 378 KEKGKDV-----------DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
K +D+ +K +Y L N +A + F ++ + PD FTYT
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF-EILVTKKIVPDLFTYT 639
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+IN Y + + +A AL +M R +P+++ + L++
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y + + + + D + LF +M +R + P+++T++ L+ + P + +
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPERNLS--R 750
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M +F+ +PD +I +IG++ A ++D+ D ++ALI G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
++ M G KP++V Y L+ R A + +EM++ G P + +
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 356 ALLQAYCRAR 365
A+ A +A+
Sbjct: 871 AVHYAKLKAK 880
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 183/410 (44%), Gaps = 15/410 (3%)
Query: 103 KSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNP-ETALL 161
K+Y +T L ++ + + Q +L GL NV+ ++IV+ + E +
Sbjct: 86 KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK 145
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
F K R++ +N L + ++ A L DEM G+KP+++T+++L++
Sbjct: 146 VFNSMKD-----RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGY 200
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
++ + A+ ++M +P + +S++ A G++ + +++ + D
Sbjct: 201 ASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDV 260
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
+ LI MY +G V+ M N+V +N+L+ + A +DA+ +
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLLKDAEALMIR 316
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M K G P+ T+ +L Y E AL V +MKEKG + V + +F C+ GN
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
A+K+F M+ G P+ T ++L+ + C+ + + + +R + T
Sbjct: 377 FRNALKVFIKMQEEG-VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELG 511
+LV +YGK+ ++IF + + ++ +C+L R E G
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLAS----WNCMLMGYAMFGRGEEG 481
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 171/382 (44%), Gaps = 21/382 (5%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
+ F ++ +L+ G++ N+ ++L+ S + +E K+ F D NLS
Sbjct: 103 EGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSR----NGKLELSRKV--FNSMKDRNLS 156
Query: 250 A--SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
+ S++ Y ++G VD A+ L D + + D V +++L+ Y G ++V M
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
++ G KP+ + ++LL A+ + K I+ +++N + L+ Y +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
A V+ M K + V +N L ++ +A + M+ G +PD T+ S
Sbjct: 277 PYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEG-IKPDAITWNS 331
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
L + Y+ +GK +A ++ +M G PN+++ T++ K + +K+F ++ + G
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 488 ISPDDRFCDCLLYVATQIPRQELGKITA--CIEKAKPKLGSVVRYLTEEHEGDGDFRKEA 545
+ P+ LL + + GK C+ K V L + + GD + A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL-QSA 450
Query: 546 LELFNSIDDDVKKSLC--NCLI 565
+E+F I + KSL NC++
Sbjct: 451 IEIFWGIKN---KSLASWNCML 469
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 13/298 (4%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +FD M + N++ +++LV+ S + A +M +PD S+
Sbjct: 279 ARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS 334
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
YA +G + AL + + K + + V+++A+ +GN+ L V+ M+ G P
Sbjct: 335 GYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N T + LL +G K ++ ++ + AL+ Y ++ + A+ ++
Sbjct: 395 NAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+K K +N + A FG +E + F+ M +G +PD T+TS++++
Sbjct: 455 WGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG-MEPDAITFTSVLSVCKN 509
Query: 435 MGKVTEAEALLNEM-IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G V E + M R G P I + +V L G++ D+ ++ + + + PD
Sbjct: 510 SGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA---WDFIQTMSLKPD 564
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 10/218 (4%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
+SASM + Y R ++ A L+D E + D +A++ ++ + SGN++ + ++ +M
Sbjct: 26 VSASMGF-YGRCVSLGFANKLFD----EMPKRDDLAWNEIVMVNLRSGNWEKAVELFREM 80
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
+ GAK T LL + + + I+ +++ G N +L+ Y R
Sbjct: 81 QFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKL 140
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
E + V+ MK++ +N + G D+A+ + +M+ G +PD T+ S
Sbjct: 141 ELSRKVFNSMKDRNLSS----WNSILSSYTKLGYVDDAIGLLDEMEICG-LKPDIVTWNS 195
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
L++ Y+ G +A A+L M G +P+ +++SL+
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQ 233
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 7/220 (3%)
Query: 295 GNYDACLSVYSDMKVLGAKPNM--VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G Y C+S+ K+ P + +N ++ R+ A ++ EM +G
Sbjct: 31 GFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDS 90
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
T LLQ + ++ + G + + + N L M + G + + K+F M
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
K + ++ S+++ Y+ +G V +A LL+EM CG +P+I+ SL+ Y
Sbjct: 151 K-----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 473 ADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
+ D + + ++ G+ P LL + +LGK
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 145/340 (42%), Gaps = 22/340 (6%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
PE AL K+K A +VV + + +F A K+F +M + GV PN T S
Sbjct: 342 PEKALDVIGKMKEK-GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 216 TLVACASTCSVPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
TL+ S+ H K V F + C D ++ +++ +Y + G++ A+ ++ K
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLIC--DAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
+ +++ ++ Y M G + ++ +S M G +P+ +T+ ++L + +
Sbjct: 459 NK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQ 514
Query: 334 DAKTIYEEM-VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
+ ++ M + G P + ++ R+ ++A + M K D ++
Sbjct: 515 EGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAF 571
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDN-FTYTSLINMYSCMGKVTEAEALLNEM--- 448
C + + A + ++ +P N Y +IN+YS + + + E + N M
Sbjct: 572 LSSCKIHRDLELAEIAWKRLQV---LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
Query: 449 -IRCGFEPNILALTSLVHL-YGKAKRADDVVKIFNQLLDL 486
+R + + + VH+ Y + K D I+ +L L
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKL 668
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 140/336 (41%), Gaps = 39/336 (11%)
Query: 159 ALLAFEYF--KQKIKPARHVV-LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
A LA+ +F + + RH V Y++ +K+F E ++ +L DEM+Q G TF+
Sbjct: 129 AKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFN 188
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L+ + +AV F K +F P + Y I N + + Y K
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRP-------FKHSYNAILNSLLGVKQY---KLI 238
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
+W VY M G P+++TYN LL+ R +
Sbjct: 239 EW-------------------------VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRF 273
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+++EM ++GFSP+ TY LL + AL+ MKE G D + Y L D
Sbjct: 274 DRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
+ GN EA K F D C+PD YT +I Y G++ +A+ + EM G P
Sbjct: 334 LSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
N+ S++ A + + ++ G +P+
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YN+ L + R ++LFDEM + G P+ T++ L+ + P A+
Sbjct: 254 VLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M +P ++I +R GN++ D R D V ++ +I Y +SG
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG 373
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
D ++ +M V G PN+ TYN+++ + A R+A + +EM G +PN+ Y+
Sbjct: 374 ELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 433
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
L+ +A +A V +EM +KG V V
Sbjct: 434 TLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 37/320 (11%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
L M + P+ TF+ + ++ P KAV+ F M C D +++ V
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ V+ A L+ RA ++ VDTV ++ ++ + + L V +M G PN+
Sbjct: 173 KSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 318 TYNNLLYAMGRAKRARDA-----------------------------------KTIYEEM 342
TYN +L RA + R A + +++EM
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
++ G P+ TY A++Q C+ E+A+ +++EM +G + + YN+L H G
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
++ M++ G C+P+ TY +I YS +V +A L +M PN+
Sbjct: 352 SRGEELMQRMENEG-CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 463 LVHLYGKAKRADDVVKIFNQ 482
L+ KR++D+V NQ
Sbjct: 411 LISGMFVRKRSEDMVVAGNQ 430
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 37/283 (13%)
Query: 149 VLDNMVNPETALLAFEYFKQ-KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGV 207
+LD + + A+E F+ + + + V YNV L + IK +A ++ EM++RG+
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALS 267
PNL T++T++ A E+F +M +CE
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE------------------------ 262
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
+D V ++ ++ +G++G +V+ +M G P++ TYN ++ +
Sbjct: 263 -----------IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC 311
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
+ +A ++EEMV+ G+ PN TY L++ A + + M+ +G + +
Sbjct: 312 KKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQ 371
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
YNM+ + ++A+ +F M SGDC P+ TY LI+
Sbjct: 372 TYNMMIRYYSECSEVEKALGLFEKM-GSGDCLPNLDTYNILIS 413
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 136/286 (47%), Gaps = 7/286 (2%)
Query: 229 KAVEWFEKMPSFECEPDDNLSAS--MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
KA+++F + + E + S+ I + AR+ SL R ++ + F+
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+ + Y +G D + ++ +M G ++ ++N +L + ++KR A ++ + +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGR 190
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
FS + TY +L +C + + AL V KEM E+G + + YN + G A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+ F +MK DC+ D TYT++++ + G++ A + +EMIR G P++ +++ +
Sbjct: 251 EFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDRFCDCL---LYVATQIPRQE 509
K ++ V +F +++ G P+ + L L+ A + R E
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 4/208 (1%)
Query: 129 VSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKP--ARHVVLYNVTLKLF 186
+ EM+ +G+ N+T M L A+E+F + K VV Y + F
Sbjct: 218 LKEMVERGINPNLTTYNTM--LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 275
Query: 187 REIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
+ RA +FDEM++ GV P++ T++ ++ AV FE+M EP+
Sbjct: 276 GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNV 335
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
+I G L R + E + ++ +I+ Y + L ++
Sbjct: 336 TTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARD 334
M PN+ TYN L+ M KR+ D
Sbjct: 396 MGSGDCLPNLDTYNILISGMFVRKRSED 423
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 148/363 (40%), Gaps = 41/363 (11%)
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTL----VACASTCS 225
+ P L+++ L + A ++F +M++ +KPNL+T +TL V S+ S
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE-KWRVDTVAF 284
+ A E F+ M + ++ Y G ++ AL + +R +E K D V +
Sbjct: 185 IS-SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+ ++K G + DMK G PN VTYNNL+Y + ++A I E M +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
P+ TY L+ C A + L + MK D V YN L D C G + E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 405 AMKIFADMKSSG-----------------------------------DCQPDNFTYTSLI 429
A K+ M++ G PD TY +LI
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
Y +G ++ A ++ EM + G + N + L +++ K ++ D+ + N G
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 490 PDD 492
D+
Sbjct: 484 VDE 486
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 144/362 (39%), Gaps = 53/362 (14%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
K + P R V YN + + ++ A ++ + M Q V P+L T++ L+
Sbjct: 268 KNGLVPNR--VTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARI--GNVDMALSLYDRAKTE--------- 275
+ +E + M S + +PD + Y + G ++ LSL R E
Sbjct: 326 MREGLELMDAMKSLKLQPD-------VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378
Query: 276 ---------KWRV-----------------------DTVAFSALIKMYGMSGNYDACLSV 303
KW D V + LIK Y G+ L +
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+M G K N +T N +L A+ + ++ +A + K GF + TY L+ + R
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
E AL ++ EMK+ +N L H G + AM+ F ++ SG PD+
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG-LLPDDS 557
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
T+ S+I Y G+V +A NE I+ F+P+ L++ K + + FN L
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 484 LD 485
++
Sbjct: 618 IE 619
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 138/309 (44%), Gaps = 6/309 (1%)
Query: 177 VLYNVTLK-LFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V +N++LK L +E K K+ + + G P+++T+ TL+ A+E
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M + + +++ + +D A +L + A + VD V + LI +
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ L ++ +MK + P + T+N+L+ + + A ++E+ ++G P+ T+
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+++ YC+ E A Y E + D N+L + G ++A+ F +
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKR 472
+ D TY ++I+ + K+ EA LL+EM G EP+ S + L GK
Sbjct: 621 REV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Query: 473 ADDVVKIFN 481
D+++K F+
Sbjct: 679 TDELLKKFS 687
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 157/384 (40%), Gaps = 47/384 (12%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E AL E + K V YN LK + ++L +M + G+ PN +T++
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
LV +A + E M PD +I G++ L L D K+ K
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYS-----DMKVLGAKPNMVTYN-NLLYAMGRAK 330
+ D V ++ LI G ++ LS+ + M+ G K N VT+N +L + K
Sbjct: 341 LQPDVVTYNTLI-----DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
R + + E + +GFSP+ TY L++AY + AL + +EM +KG ++ + N
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 391 MLFD-MC--------------AH----------FGN----------ADEAMKIFADMKSS 415
+ D +C AH +G ++A++++ +MK
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
P T+ SLI GK A +E+ G P+ S++ Y K R +
Sbjct: 516 -KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 476 VVKIFNQLLDLGISPDDRFCDCLL 499
+ +N+ + PD+ C+ LL
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILL 598
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 136/304 (44%), Gaps = 14/304 (4%)
Query: 163 FEYFKQ-KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQR-GVKPNLITFSTLVAC 220
F+ KQ I P+ V+ +N L + + G A LFDEM + GV P+ TF+TL+
Sbjct: 161 FQTMKQMGISPS--VLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLING 218
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA--KTEKWR 278
S+ +A F+ M + C PD ++I R G V +A ++ K
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+ V+++ L++ Y M D + V+ DM G KPN VTYN L+ + A R + K I
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 339 Y--EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
F+P+ T+ L++A+C A + A+ V++EM D Y++L
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 397 AHFGNADEAMKIFAD------MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
D A +F + + +C+P Y + GK +AE + ++++
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 451 CGFE 454
G +
Sbjct: 459 RGVQ 462
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 134/274 (48%), Gaps = 5/274 (1%)
Query: 212 ITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY-- 269
I+ +T++ VP + +F+ + + + M+ R N+++A +
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFS 125
Query: 270 -DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+R ++ F++LI+ YG +G + + ++ MK +G P+++T+N+LL + +
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 329 AKRARDAKTIYEEMVKN-GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
R A +++EM + G +P+ T+ L+ +C+ ++A ++K+M+ + D V
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 388 LYNMLFDMCAHFGNADEAMKIFADM-KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
YN + D G A + + M K + D P+ +YT+L+ Y ++ EA + +
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
+M+ G +PN + +L+ +A R D++ I
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 142/336 (42%), Gaps = 41/336 (12%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM- 237
+N ++ + F + KLF M Q G+ P+++TF++L++ A + F++M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
++ PD ++I + + VD A ++ + D V ++ +I +G
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 298 DACLSVYSDM--KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+V S M K PN+V+Y L+ + +A ++ +M+ G PN TY
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 356 ALLQAYCRARCSEDALSVYKEMKE---KGKDV------DKVLYNMLFDMCAHFGNADEAM 406
L++ A Y E+K+ G D D +N+L G+ D AM
Sbjct: 321 TLIKGLSEAH-------RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL----ALTS 462
K+F +M + PD+ +Y+ LI + AE L NE+ FE +L
Sbjct: 374 KVFQEMLNM-KLHPDSASYSVLIRTLCMRNEFDRAETLFNEL----FEKEVLLGKDECKP 428
Query: 463 LVHLY----------GKAKRADDVVKIFNQLLDLGI 488
L Y GK K+A+ K+F QL+ G+
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAE---KVFRQLMKRGV 461
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 151/325 (46%), Gaps = 2/325 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YN +K + A + M + G++P++ T+++L++ A+ + ++ ++ F+
Sbjct: 48 VITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFD 107
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV-AFSALIKMYGMS 294
+M PD +++ Y ++G A + V + ++ L+ S
Sbjct: 108 EMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKS 167
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G+ D + ++ +K KP ++TYN L+ + +++R + E+ K+G++PN TY
Sbjct: 168 GHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+L+ Y + + E L ++ +MK++G D + G A+EA + ++
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
SG D +Y +L+N+Y G + + LL E+ G +P+ T +V+
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 475 DVVKIFNQLLDLGISPDDRFCDCLL 499
K + ++G+ P C+CL+
Sbjct: 347 GAEKHLACIGEMGMQPSVVTCNCLI 371
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D + ++ LIK Y D +V M+ G +P++ TYN+L+ + ++
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV-LYNMLFDMCAH 398
+EM+ +G SP+ +Y L+ Y + +A + E V + YN+L D
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G+ D A+++F +KS +P+ TY LIN +V + ++ E+ + G+ PN +
Sbjct: 167 SGHTDNAIELFKHLKSR--VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
T+++ +Y K KR + +++F ++ G + D F +C
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG-FANC 262
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 147/327 (44%), Gaps = 48/327 (14%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P L N+++ + ++ RAE L + ++ GV P++IT++TL+
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG----------- 57
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
Y R +D A ++ R + D +++LI
Sbjct: 58 ------------------------YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGA 93
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL---YAMGRAKRARDAKTIYEEMVKNGFS 348
+ + L ++ +M G P+M +YN L+ + +GR A K ++E++ G
Sbjct: 94 AKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA--FKILHEDIHLAGLV 151
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-MCA--HFGNADEA 405
P TY LL A C++ +++A+ ++K +K + K + + YN+L + +C G+ D
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKP-ELMTYNILINGLCKSRRVGSVDWM 210
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
M+ ++K SG P+ TYT+++ MY ++ + L +M + G+ + A ++V
Sbjct: 211 MR---ELKKSG-YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVS 266
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDD 492
K RA++ + ++L+ G D
Sbjct: 267 ALIKTGRAEEAYECMHELVRSGTRSQD 293
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 127/305 (41%), Gaps = 52/305 (17%)
Query: 148 IVLDNMV---NPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
I+LD + + + A+ F++ K ++KP ++ YN+ + + + G + + E+ +
Sbjct: 159 ILLDALCKSGHTDNAIELFKHLKSRVKP--ELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 205 RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
G PN +T++T++ K ++ F KM D + +++ + G +
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 265 ALS-LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN--- 320
A +++ ++ D V+++ L+ +Y GN DA + ++++ G KP+ T+
Sbjct: 277 AYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV 336
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
N L +G A EM G P+ T L+ C+A
Sbjct: 337 NGLLNIGNTGGAEKHLACIGEM---GMQPSVVTCNCLIDGLCKA---------------- 377
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
G+ D AM++FA M+ D FTYTS+++ G++
Sbjct: 378 -------------------GHVDRAMRLFASMEVR-----DEFTYTSVVHNLCKDGRLVC 413
Query: 441 AEALL 445
A LL
Sbjct: 414 ASKLL 418
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 15/294 (5%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE--CEPDDNLSASM 252
A K F ML+ GV+PN+ T L+ +A F M F CE + +SM
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE---SAYSSM 285
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I +Y R+ D A + D K ++ R+ + ++ Y G + S+ M+ G
Sbjct: 286 ITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 345
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
PN++ YN L+ G+ + A+ ++ + G P+ +Y ++++ + RA E+A
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM- 431
Y+E+K G + L ++ A +G+ D A+K DM G CQ Y+S++ +
Sbjct: 406 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG-CQ-----YSSILGII 459
Query: 432 ---YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
Y +GK+ +L N + +SLV Y K DD + + +
Sbjct: 460 LQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 140/333 (42%), Gaps = 5/333 (1%)
Query: 162 AFEYFKQKIKPARHVVLY--NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
A + + K++ + L+ + + ++ + +F AEKL+ + GV + I FS +V
Sbjct: 542 AVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVR 601
Query: 220 CASTCSVPHKAVEWFEKM-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
+A E M + PD L M+ +Y + D LY R +
Sbjct: 602 MYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIH 661
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+ ++ +I + D + +M G PN VT+N LL G+AK + +
Sbjct: 662 WNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNEL 721
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ ++G + +Y ++ AY + + + S K M+ G V YN L D
Sbjct: 722 FLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
++ I MK S PD++TY +IN+Y G + E +L E+ G P++
Sbjct: 781 DKQMEKFRSILKRMKKS-TSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ +L+ YG ++ V + ++ I PD
Sbjct: 840 SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 133/333 (39%), Gaps = 42/333 (12%)
Query: 189 IKDFGRAEKL------FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
I+ +GRA+ + E+ + G KPN TL+ + A++ E M C
Sbjct: 391 IEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGC 450
Query: 243 EPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS 302
+ L ++ Y ++G +D+ + + R++ +FS+L+ Y G D CL
Sbjct: 451 QYSSILGI-ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLG 509
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
+ + K + Y+ L+ + + + DA IY +++ N + ++ Y
Sbjct: 510 LLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYT 569
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
+A +Y +K G +D++ ++++ M G+ +EA + M D PD
Sbjct: 570 VMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDV 629
Query: 423 FTYTSLIN----------------------------MYSCMGK-------VTEAEALLNE 447
+ + ++ MY+C+ + E E
Sbjct: 630 YLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEE 689
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
MIR GF PN + L+ +YGKAK V ++F
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 722
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 2/254 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V L+ L+++++ + + L+ + + G+ N ++ ++ C + + FE
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M + P+ ++ VY + L+ AK VD ++++ +I YG +
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNK 747
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+Y S +M+ G ++ YN LL A G+ K+ ++I + M K+ P+ TY
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
++ Y ++ V KE+KE G D YN L G +EA+ + +M+
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 416 GDCQPDNFTYTSLI 429
+ PD TYT+L+
Sbjct: 868 -NIIPDKVTYTNLV 880
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 42/333 (12%)
Query: 158 TALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ-RGVKPNLITFST 216
A+ F++ + K + V Y++ L++ +++ RAE L E+ + + F+T
Sbjct: 156 NAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNT 215
Query: 217 LV-ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
++ AC +V A +WF M F P+ + + M + LY +
Sbjct: 216 VIYACTKKGNVK-LASKWFHMMLEFGVRPN-------------VATIGMLMGLYQK---- 257
Query: 276 KWRVDTVAFS-ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
W V+ F+ + ++ +G+ C S YS M + Y R +
Sbjct: 258 NWNVEEAEFAFSHMRKFGI-----VCESAYSSM--------ITIYT-------RLRLYDK 297
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A+ + + M ++ + +L AY + E A S+ M+ G + + YN L
Sbjct: 298 AEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLIT 357
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
+ A +F + + G +PD +Y S+I + EA+ E+ RCG++
Sbjct: 358 GYGKIFKMEAAQGLFHRLCNIG-LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYK 416
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
PN L +L++L K D +K + +G
Sbjct: 417 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGA-KPNMVTYNNLLYAMGRAKRARDAKTIYE 340
VA+S ++++ G +D + ++ + + +N ++YA + + A +
Sbjct: 175 VAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFH 234
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG 400
M++ G PN T L+ Y + E+A + M++ G V + Y+ + +
Sbjct: 235 MMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI-VCESAYSSMITIYTRLR 293
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
D+A ++ D+ + + ++N YS GK+ AE++L M GF PNI+A
Sbjct: 294 LYDKAEEVI-DLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAY 352
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+L+ YGK + + +F++L ++G+ PD+
Sbjct: 353 NTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 199 FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYAR 258
F+EM++ G PN +TF+ L+ + K E F + D ++I Y +
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF-LLAKRHGVVDVISYNTIIAAYGK 745
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
+ S + + + V A++ L+ YG + S+ MK + P+ T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
YN ++ G + + +E+ ++G P+ +Y L++AY E+A+ + KEM+
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+ DKV Y L EA+K MK G
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 106 AATSSPLEKLAKSLDSCNP--TEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAF 163
+A+++P+E+ S S + T++ V+ G N E E + V + ++ +
Sbjct: 76 SASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLFVNNGEIDVNYS---- 131
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG-VKPNLITFSTLVACAS 222
IKP + + N LK D A K FD M G + N + +S ++
Sbjct: 132 -----AIKPGQSLEHCNGILKRLESCSD-TNAIKFFDWMRCNGKLVGNFVAYSLILRVLG 185
Query: 223 TCSVPHKAVEWFEKMPSF-ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+A + +++ F E + + ++IY + GNV +A KW
Sbjct: 186 RREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLA---------SKW---- 232
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
+ M G +PN+ T L+ + +A+ +
Sbjct: 233 ----------------------FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSH 270
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
M K G Y++++ Y R R + A V MK+ + + ++ + + G
Sbjct: 271 MRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
+ A I M+++G P+ Y +LI Y + K+ A+ L + + G EP+ +
Sbjct: 330 MELAESILVSMEAAG-FSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYR 388
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
S++ +G+A ++ + +L G P+
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YN + + + KD+ M G +L ++TL+ K +
Sbjct: 733 VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M PD MI +Y G +D + K D +++ LIK YG+ G
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+ + + +M+ P+ VTY NL+ A+ R
Sbjct: 853 MVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRR 885
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 10/318 (3%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEML--QRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+N L+ + I KLF +L Q +P TF L+ + C P ++
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTF--LILLSHACRAPDSSISNVH 144
Query: 236 K----MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ M + EPD + + G VD A L + DT ++ L+K
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 292 GMSGNYDACLSVYSDMKV-LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ +M+ KP++V++ L+ + +K R+A + ++ GF P+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
Y +++ +C +A+ VYK+MKE+G + D++ YN L + G +EA
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
M +G +PD TYTSL+N G+ A +LL EM G PN +L+H KA
Sbjct: 325 TMVDAG-YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 471 KRADDVVKIFNQLLDLGI 488
+ D ++++ + G+
Sbjct: 384 RLMDKGMELYEMMKSSGV 401
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V ++ ++ E A+ L E+ ++ P+ T++ L+ C H E+ ++
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 237 M-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M F+ +PD +I N+ A+ L + ++ D ++ ++K +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ VY MK G +P+ +TYN L++ + +A R +A+ + MV G+ P+ TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+L+ CR S ALS+ +EM+ +G + YN L D+ M+++ MKSS
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEA 441
G + ++ Y +L+ GKV EA
Sbjct: 400 G-VKLESNGYATLVRSLVKSGKVAEA 424
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 13/249 (5%)
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDT-VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
+ I NV L+L E +V T +A +L + +G D + ++ + P+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE----TGRVDEAKDLMKELTEKHSPPD 193
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYE--EMVKNGFS--PNWPTYAALLQAYCRARCSEDAL 371
TYN LL + + K D +YE + +++ F P+ ++ L+ C ++ +A+
Sbjct: 194 TYTYNFLLKHLCKCK---DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ ++ G D LYN + EA+ ++ MK G +PD TY +LI
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG-VEPDQITYNTLIFG 309
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
S G+V EA L M+ G+EP+ TSL++ + + + + ++ G +P+
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 492 DRFCDCLLY 500
D + LL+
Sbjct: 370 DCTYNTLLH 378
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 116/260 (44%), Gaps = 9/260 (3%)
Query: 261 NVDMALSLYDR-AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV-T 318
N+ A SL++ A T + +D +++++ YG + + ++ +L ++PN
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQ--HILKSQPNFRPG 121
Query: 319 YNNLLYAMGRAKRARDAKT-----IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
+ L + A RA D+ + MV NG P+ T +++ C ++A +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
KE+ EK D YN L + + +M+ D +PD ++T LI+
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+ EA L++++ GF+P+ +++ + + + V ++ ++ + G+ PD
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 494 FCDCLLYVATQIPRQELGKI 513
+ L++ ++ R E ++
Sbjct: 302 TYNTLIFGLSKAGRVEEARM 321
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 148 IVLDNMVNP----ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEML 203
I++DN+ N E L + KP LYN +K F + A ++ +M
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKP--DCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 204 QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVD 263
+ GV+P+ IT++TL+ S +A + + M EP
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP------------------- 333
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
DT +++L+ G LS+ +M+ G PN TYN LL
Sbjct: 334 ----------------DTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ + +A+ +YE M +G YA L+++ ++ +A V+
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 161/342 (47%), Gaps = 13/342 (3%)
Query: 150 LDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKP 209
++ +V+ + +L+ + + P V NV + F ++ GR + R +
Sbjct: 105 VNGLVHDQVSLIYSKMIACGVSP--DVFALNVLIHSFCKV---GRLSFAISLLRNRVISI 159
Query: 210 NLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY 269
+ +T++T+++ + +A ++ +M PD ++I + ++GN A +L
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRA 329
D E ++ + + L+ Y N A Y DM + G P++VT+++++ + +
Sbjct: 220 D----EISELNLITHTILLSSYY---NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 330 KRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY 389
+ + + EM + PN TY L+ + +A AL++Y +M +G VD V+Y
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 390 NMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI 449
+L D G+ EA K F M + P+ TYT+L++ G ++ AE ++ +M+
Sbjct: 333 TVLMDGLFKAGDLREAEKTF-KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 450 RCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
PN++ +S+++ Y K ++ V + ++ D + P+
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 8/298 (2%)
Query: 162 AFEYFKQK-IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
A++ ++K I+P + +N+ + R+ D KL+D+M G+KP+L++ + +V
Sbjct: 560 AYKGMREKGIEP--DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGM 617
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYV--YARIGNVDMALSLYDRAKTEKWR 278
+A+ +M E P NL+ I++ ++ D ++ + +
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHP--NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIK 675
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+ ++ LI G V DM+ G P+ VT+N+L++ R A +
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST 735
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
Y M++ G SPN TY +++ A ++ EMK +G D YN L A
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
GN +M I+ +M + G P TY LI+ ++ +GK+ +A LL EM + G PN
Sbjct: 796 IGNMKGSMTIYCEMIADG-LVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 149/318 (46%), Gaps = 6/318 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V+Y V + + D AEK F +L+ PN++T++ LV A
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M P+ +SMI Y + G ++ A+SL + + + + + +I +G
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + + +M+++G + N + L+ + R R ++ K + ++MV G + + Y
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYT 508
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG--NADEAMKIFADMK 413
+L+ + + E AL+ +EM+E+G D V YN+L FG AD A K M+
Sbjct: 509 SLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK---GMR 565
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
G +PD T+ ++N G L ++M CG +P++++ +V + + +
Sbjct: 566 EKG-IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 624
Query: 474 DDVVKIFNQLLDLGISPD 491
++ + I NQ++ + I P+
Sbjct: 625 EEAIHILNQMMLMEIHPN 642
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 159/373 (42%), Gaps = 8/373 (2%)
Query: 130 SEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPAR--HVVLYNVTLKLFR 187
S+M+V+G+ ++ +++D + A + FK ++ + +VV Y +
Sbjct: 318 SQMVVRGIPVDLVVYT--VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
+ D AE + +ML++ V PN++T+S+++ + +AV KM P+
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
++I + G +MA+ L + + AL+ G + DM
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR-ARC 366
G + + Y +L+ + A EEM + G + +Y L+ + +
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
D YK M+EKG + D +N++ + G+++ +K++ MKS G +P +
Sbjct: 556 GADW--AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG-IKPSLMSCN 612
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
++ M GK+ EA +LN+M+ PN+ + K KRAD + K LL
Sbjct: 613 IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSY 672
Query: 487 GISPDDRFCDCLL 499
GI + + L+
Sbjct: 673 GIKLSRQVYNTLI 685
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 135/318 (42%), Gaps = 6/318 (1%)
Query: 176 VVLYNVTLKLFREIKDFGR--AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
VV YNV L + FG+ A+ + M ++G++P++ TF+ ++ ++
Sbjct: 539 VVSYNV---LISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
++KM S +P ++ + G ++ A+ + ++ + + + +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
DA + + G K + YN L+ + + + A + +M GF P+ T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
+ +L+ Y ALS Y M E G + YN + + G E K ++MK
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
S G +PD+FTY +LI+ + +G + + + EMI G P L+ + +
Sbjct: 776 SRG-MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 834
Query: 474 DDVVKIFNQLLDLGISPD 491
++ ++ G+SP+
Sbjct: 835 LQARELLKEMGKRGVSPN 852
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N+ + + E A + ++M+ + PNL T+ + +S + E + S
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
+ + + ++I ++G A + + + DTV F++L+ Y + +
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
LS YS M G PN+ TYN ++ + A ++ EM G P+ TY AL+
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
+ + ++++Y EM G YN+L A+ G +A ++ +M G
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG-VS 850
Query: 420 PDNFTYTSLIN-----------------MYSCMGKVTEAEALLNEMI 449
P+ TY ++I+ MY + EA+ LL EM+
Sbjct: 851 PNTSTYCTMISGLCKLCTHPDVEWNKKAMY-----LAEAKGLLKEMV 892
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 140/329 (42%), Gaps = 27/329 (8%)
Query: 185 LFREIKDFGRAEK---LFDEMLQRGVKPNLITFSTLV-----------ACASTCSVPHKA 230
L +K GR ++ L +M+ +GV + I +++L+ A A + +
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ W + S+ N+ S + + ++G D A Y + + D F+ ++
Sbjct: 535 MPW--DVVSY------NVLISGMLKFGKVG-ADWA---YKGMREKGIEPDIATFNIMMNS 582
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
G+ + L ++ MK G KP++++ N ++ + + +A I +M+ PN
Sbjct: 583 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
TY L + + ++ ++ + G + + +YN L G +A +
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 702
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
DM++ G PD T+ SL++ Y V +A + + M+ G PN+ +++ A
Sbjct: 703 DMEARGFI-PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 471 KRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+V K +++ G+ PDD + L+
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 22/277 (7%)
Query: 109 SSPLEKLAKSLDSCNPTEQQVSEMLVKG-LGENVTEREAMIVLDNMVNPETA--LLAFEY 165
S + KL + SC +S +V G L EN EA+ +L+ M+ E L +
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 166 F-----KQKIKPA---RHVVLYNVTLKLFREIKD--------FG---RAEKLFDEMLQRG 206
F K K A H L + +KL R++ + G +A + +M RG
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
P+ +TF++L+ S KA+ + M P+ ++I + G +
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
K+ R D ++ALI GN +++Y +M G P TYN L+
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ A+ + +EM K G SPN TY ++ C+
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 152/323 (47%), Gaps = 9/323 (2%)
Query: 184 KLFREIKDFGRAEKLFDEMLQR----GVKPNLITFSTLV-ACASTCSVPHKAVEWFEKMP 238
K+ R + G+ K D L+ GVK + I ++L+ A S+ H A E F K+
Sbjct: 208 KVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEH-AHEVFLKLF 266
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+PD +I+ + + D A ++ D K ++ D V +++ ++ Y G++
Sbjct: 267 D-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ +M+ G PN+VTY +++++G++K+ +A +YE+M ++G P+ Y++L+
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM--KSSG 416
+ +DA ++++M +G D ++YN + H + A+++ M +
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
C P+ TY L+ M K+ LL+ M++ ++ L+ + + ++
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 477 VKIFNQLLDLGISPDDRFCDCLL 499
F + + G+ P D C L+
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLV 528
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 5/264 (1%)
Query: 251 SMIYVYARIGNVDMALSLYDRA-KTEKWRVDTV-AFSALIKMYGMSGNYDACLSVYSDM- 307
+M+ V + N D+ L + K E+ ++ T+ S +++ SG Y+ + + +M
Sbjct: 171 AMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME 230
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
K G K + + N+L+ A+ + A ++ ++ + P+ T+ L+ +C+AR
Sbjct: 231 KSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKF 289
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+DA ++ MK D V Y + G+ ++ +M+ +G C P+ TYT
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG-CNPNVVTYTI 348
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+++ +V EA + +M G P+ +SL+H+ K R D +IF + + G
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 488 ISPDDRFCDCLLYVATQIPRQELG 511
+ D + ++ A R E+
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMA 432
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y ++ + + DF R ++ +EM + G PN++T++ ++ +A+ +E
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYE 367
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
KM C PD +S+I++ ++ G A +++ + R D + ++ +I
Sbjct: 368 KMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHS 427
Query: 296 NYDACLSVYSDMKVLGAK---PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
+ L + M+ + PN+ TY LL K+ + + MVKN S +
Sbjct: 428 RDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKG 381
TY L++ C + E+A ++E KG
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKG 516
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 3/255 (1%)
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D SM+ + A+ + +S+ + T K + F+ +K + + + ++
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
MK K + T N LL ++GRAK ++A+ +++++ K F+PN TY LL +CR
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRV 310
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
R +A ++ +M + G D V +N++ + +A+K+F MKS G C P+ +
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-PNVRS 369
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
YT +I + + A ++M+ G +P+ T L+ +G K+ D V ++ ++
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 485 DLGISPDDRFCDCLL 499
+ G PD + + L+
Sbjct: 430 EKGHPPDGKTYNALI 444
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 139/314 (44%), Gaps = 3/314 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + + + + F + +EM +G+ + TF+ + + KAV FE M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
++ + ++ R A L+D+ K E++ + + ++ L+ + N
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+++DM G KP++V +N +L + R+ + DA ++ M G PN +Y ++
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ +C+ E A+ + +M + G D +Y L D ++ +M+ G
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH- 433
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
PD TY +LI + + + N+MI+ EP+I ++ Y A+ +
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 479 IFNQLLDLGISPDD 492
++++++ GI PDD
Sbjct: 494 VWDEMIKKGICPDD 507
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 2/262 (0%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A + F+ K++ P +++ Y V L + +++ A +++++M+ G+KP+++ + ++
Sbjct: 282 AQVLFDKLKERFTP--NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
A++ F M S P+ MI + + +++ A+ +D +
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D ++ LI +G D + +M+ G P+ TYN L+ M K I
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
Y +M++N P+ T+ ++++Y AR E +V+ EM +KG D Y +L
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 399 FGNADEAMKIFADMKSSGDCQP 420
G + EA + +M G P
Sbjct: 520 EGKSREACRYLEEMLDKGMKTP 541
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 146/362 (40%), Gaps = 10/362 (2%)
Query: 102 KKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMIVLDNMVNPET 158
++ +A S + L E VS EM KGL T AM +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 246
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A+ FE K K K V N L K A+ LFD++ +R PN++T++ L+
Sbjct: 247 AVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 304
Query: 219 ACASTCSVPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
C V + +A + M +PD M+ R A+ L+ K++
Sbjct: 305 N--GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ +++ +I+ + + + + + DM G +P+ Y L+ G K+
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +EM + G P+ TY AL++ + E +Y +M + + +NM+
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
N + ++ +M G C PD+ +YT LI GK EA L EM+ G +
Sbjct: 483 FVARNYEMGRAVWDEMIKKGIC-PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 457 IL 458
++
Sbjct: 542 LI 543
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLK-LFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
E A + + +KP +V +NV L+ L R +K A KLF M +G PN+ +++
Sbjct: 315 EAARIWNDMIDHGLKP--DIVAHNVMLEGLLRSMKK-SDAIKLFHVMKSKGPCPNVRSYT 371
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
++ S A+E+F+ M +PD + +I + +D L + +
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D ++ALIK+ + +Y+ M +P++ T+N ++ + A+
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
+ +++EM+K G P+ +Y L++ S +A +EM +KG + YN
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 124/249 (49%), Gaps = 3/249 (1%)
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
SM+ + A+ + +S+ + T K + F+ +K + + + ++ MK
Sbjct: 200 SMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
K + T N LL ++GRAK ++A+ +++++ K F+PN TY LL +CR R +A
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
++ +M + G D V +N++ + +A+K+F MKS G C P+ +YT +I
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIMIR 376
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+ + A ++M+ G +P+ T L+ +G K+ D V ++ ++ + G P
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Query: 491 DDRFCDCLL 499
D + + L+
Sbjct: 437 DGKTYNALI 445
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 139/314 (44%), Gaps = 3/314 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + + + + F + +EM +G+ + TF+ + + KAV FE M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
++ + ++ R A L+D+ K E++ + + ++ L+ + N
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+++DM G KP++V +N +L + R+ + DA ++ M G PN +Y ++
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ +C+ E A+ + +M + G D +Y L D ++ +M+ G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH- 434
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
PD TY +LI + + + N+MI+ EP+I ++ Y A+ +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 479 IFNQLLDLGISPDD 492
++++++ GI PDD
Sbjct: 495 VWDEMIKKGICPDD 508
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 2/262 (0%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A + F+ K++ P +++ Y V L + +++ A +++++M+ G+KP+++ + ++
Sbjct: 283 AQVLFDKLKERFTP--NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
A++ F M S P+ MI + + +++ A+ +D +
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D ++ LI +G D + +M+ G P+ TYN L+ M K I
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
Y +M++N P+ T+ ++++Y AR E +V+ EM +KG D Y +L
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 399 FGNADEAMKIFADMKSSGDCQP 420
G + EA + +M G P
Sbjct: 521 EGKSREACRYLEEMLDKGMKTP 542
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 146/362 (40%), Gaps = 10/362 (2%)
Query: 102 KKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMIVLDNMVNPET 158
++ +A S + L E VS EM KGL T AM +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A+ FE K K K V N L K A+ LFD++ +R PN++T++ L+
Sbjct: 248 AVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 219 ACASTCSVPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
C V + +A + M +PD M+ R A+ L+ K++
Sbjct: 306 N--GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ +++ +I+ + + + + + DM G +P+ Y L+ G K+
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +EM + G P+ TY AL++ + E +Y +M + + +NM+
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
N + ++ +M G C PD+ +YT LI GK EA L EM+ G +
Sbjct: 484 FVARNYEMGRAVWDEMIKKGIC-PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Query: 457 IL 458
++
Sbjct: 543 LI 544
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLK-LFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
E A + + +KP +V +NV L+ L R +K A KLF M +G PN+ +++
Sbjct: 316 EAARIWNDMIDHGLKP--DIVAHNVMLEGLLRSMKK-SDAIKLFHVMKSKGPCPNVRSYT 372
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
++ S A+E+F+ M +PD + +I + +D L + +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D ++ALIK+ + +Y+ M +P++ T+N ++ + A+
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
+ +++EM+K G P+ +Y L++ S +A +EM +KG + YN
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 4/355 (1%)
Query: 148 IVLDNMVNPETALLAFEYFKQKIK--PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQR 205
++L+++V ++ FK+ +K ++ +YNV + + D +AEKL EM ++
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 206 GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMA 265
GV P++ T++TL++ S+ +A+ ++M P+ S I+ ++R G + A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
L+ K + + V ++ LI Y + D L + M+ G P +VTYN++L
Sbjct: 293 TRLFREIKDDV-TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
+ R R+A + EM P+ T L+ AYC+ A+ V K+M E G +D
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
Y L + A + M G P TY+ L++ + K E LL
Sbjct: 412 MYSYKALIHGFCKVLELENAKEELFSMIEKG-FSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
E + G ++ L+ K ++ D +F + G+ D + Y
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAY 525
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 25/313 (7%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN-- 247
K F A +L D++ QR + + + +LV S +P+D
Sbjct: 94 KHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSE-------------------DPEDVSH 134
Query: 248 -LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
S MIY YA+ G ++ ++ ++++ ++ + A + L+ D ++
Sbjct: 135 VFSWLMIY-YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
M LG N+ YN L++A ++ A+ + EM + G P+ TY L+ YC+
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
+ALSV M+ G + V YN + G EA ++F ++K D ++ TYT
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD--DVTANHVTYT 311
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+LI+ Y M + EA L M GF P ++ S++ + R + ++ ++
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 487 GISPDDRFCDCLL 499
I PD+ C+ L+
Sbjct: 372 KIEPDNITCNTLI 384
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 137/329 (41%), Gaps = 37/329 (11%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
+F+++ G+KP+L + L+ + + F+KM + ++ +++ +
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ G+ + A L + + D ++ LI +Y + LSV M+ G PN+V
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIV 274
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
TYN+ ++ R R R+A ++ E +K+ + N TY L+ YCR ++AL + + M
Sbjct: 275 TYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVM 333
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN------- 430
+ +G V YN + G EA ++ +M S +PDN T +LIN
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM-SGKKIEPDNITCNTLINAYCKIED 392
Query: 431 -------------------MYSCMG------KVTEAEALLNE---MIRCGFEPNILALTS 462
MYS KV E E E MI GF P +
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGISPD 491
LV + + D++ K+ + G+ D
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 164/391 (41%), Gaps = 54/391 (13%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
+ YN ++ F ++ A ++F+ M++RGV+PN+ T++ L+ +A++
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M + EP+ +I + G V A+ + + K + R D + ++ L+ G+
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 297 YDACL---------SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK--- 344
D S Y+D P++++YN L++ + + R A IY+ +V+
Sbjct: 403 LDEASKLLYLMLKDSSYTD-------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 345 --------------------------------NGFSPNWPTYAALLQAYCRARCSEDALS 372
+ N TY A++ +C+ A
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+ +M+ YN L G+ D+A ++F +M+ + PD ++ +I+
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGS 574
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
G + AE+LL M R G P++ + L++ + K D+ + F++++D G PD
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 493 RFCDCLLYVATQIPRQELGKITACIEKAKPK 523
CD +L I + E K+T ++K K
Sbjct: 635 HICDSVLKYC--ISQGETDKLTELVKKLVDK 663
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 7/303 (2%)
Query: 132 MLVKGLGENVTEREAMI--VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREI 189
ML +G NV ++ + N+ + L E + + P V YN ++ F E
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP--DVFSYNTVIRGFCEG 190
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K+ +A +L +EM G +L+T+ L+ +A+ + ++M E D +
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
S+I + G +D +L+D + ++ LI+ + G ++ M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +PN+ TY L+ + + ++A + M++ PN TY ++ C+ D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLF-DMCAHFGNADEAMKIFADM-KSSGDCQPDNFTYTS 427
A+ + + MK++ D + YN+L +CA G+ DEA K+ M K S PD +Y +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAK-GDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 428 LIN 430
LI+
Sbjct: 430 LIH 432
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 5/246 (2%)
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS 305
+NL A ++ R N ++A S Y + ++ V+ S L++ Y V +
Sbjct: 76 NNLMAKLV----RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 306 DMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
M G N+ +N LL + R A ++ EM +N P+ +Y +++ +C +
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
E AL + EMK G V + +L D G DEAM +MK G + D Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LEADLVVY 250
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
TSLI + G++ +AL +E++ G P + +L+ + K + + +IF +++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 486 LGISPD 491
G+ P+
Sbjct: 311 RGVRPN 316
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A+SL + D +++ +I+ + + L + ++MK G ++VT+ L+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
A +A + +A +EM G + Y +L++ +C + +++ E+ E+G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
+ YN L G EA +IF M G +P+ +TYT LI+ +GK EA L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
LN MI EPN + +++ K D V+I + PD+
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/229 (17%), Positives = 108/229 (47%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YN + + +A ++D ++++ + +T + L+ +KA+E ++
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
++ + + + +MI + + G +++A L + + + + ++ L+ G
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ D ++ +M+ P++V++N ++ +A + A+++ M + G SP+ TY+
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
L+ + + ++A+S + +M + G + D + + + C G D+
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 23/338 (6%)
Query: 155 NPETALLAFEYFKQK--IKPAR--HVVLYNVTLKLFREIKDFGRAEKLFDEMLQR----G 206
+P A F+Y Q+ + +R H++L LKL R GR L D++L + G
Sbjct: 63 DPLLAKEIFDYASQQPNFRHSRSSHLIL---ILKLGR-----GRYFNLIDDVLAKHRSSG 114
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPD-DNLSASMIYVYARIGNVDMA 265
F+ L+ + +P K + F KM F P +L+ + + + G + A
Sbjct: 115 YPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
L+ ++ +T +++ L++ + ++ + ++ M P++ +Y L+
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
R + A + ++M+ GF P+ +Y LL + CR +A + MK KG + D
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
Query: 386 KVLYN-MLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
V YN M+ C A +A K+ DM S+G C P++ +Y +LI G E +
Sbjct: 295 LVHYNTMILGFCRE-DRAMDARKVLDDMLSNG-CSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 445 LNEMIRCGFEPNILALTSLVH---LYGKAKRADDVVKI 479
L EMI GF P+ LV +GK + A DVV++
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEV 390
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+A +LF GV PN +++ L+ A + F KM + PD + +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ R G V+ A+ L D + + D ++++ L+ + MK+ G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P++V YN ++ R RA DA+ + ++M+ NG SPN +Y L+ C ++
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+EM KG + N L FG +EA + + +G+
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 12/266 (4%)
Query: 149 VLDNMVNPETALL-AFEYFKQKIKPARHVVL-----YNVTLKLFREIKDFGRAEKLFDEM 202
+LD +V+ L AFE FK H V+ YN+ ++ F D A +LF +M
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSS---RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 203 LQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNV 262
L+R V P++ ++ L+ + A+E + M + PD +++ R +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 263 DMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL 322
A L R K + D V ++ +I + V DM G PN V+Y L
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 323 LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
+ + + K EEM+ GFSP++ L++ +C E+A V + + + G+
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKI 408
+ + M+ + N DE+ KI
Sbjct: 397 TLHSDTWEMVIPLIC---NEDESEKI 419
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 6/277 (2%)
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGN-VDMALSLYDRAKTE 275
L+A S + + ++ + P+F +L + R N +D L+ + ++
Sbjct: 57 LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA---KHRSS 113
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM-GRAKRARD 334
+ + F+ LIK+Y + + LS + M P N +L + +
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQK 173
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A +++ +G PN +Y L+QA+C A ++ +M E+ D Y +L
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
G + AM++ DM + G PD +YT+L+N ++ EA LL M G
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFV-PDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
P+++ +++ + + RA D K+ + +L G SP+
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPN 329
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 148/336 (44%), Gaps = 25/336 (7%)
Query: 179 YNVTLKLFREIKDFG--RAEKLFDEML------QR---------------GVKPNLITFS 215
Y ++++F I DFG R+ + + +L QR G+ PN+ T +
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
LV + A + +++PS P+ +++ Y G+++ A + +
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
W D ++ L+ Y G + +V DM+ +PN VTY ++ A+ + K++ +A
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+ +++EM++ F P+ ++ A C ++A ++++M + D L + L
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
G EA K+F + + P TY +LI G++TEA L ++M +P
Sbjct: 376 LCKEGRVTEARKLFDEFEKGS--IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
N L+ K + V++ ++L++G P+
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
F L++ YG++G Y++ + ++ + G K ++ + N LL + + +R +++
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 344 KN-GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
++ G +PN T L++A C+ E A V E+ G + V Y + G+
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
+ A ++ +M G PD TYT L++ Y +G+ +EA ++++M + EPN +
Sbjct: 243 ESAKRVLEEMLDRG-WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC 495
++ K K++ + +F+++L+ PD C
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 4/264 (1%)
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
P +C +NL ++ Y G + ++ ++ R + + + L+ + + +
Sbjct: 114 PPIKC--GENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
Query: 298 DACLSVYSDMK-VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
D +++ + K G PN+ T N L+ A+ + A + +E+ G PN TY
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+L Y E A V +EM ++G D Y +L D G EA + DM+ +
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN- 290
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+ +P+ TY +I K EA + +EM+ F P+ ++ + + D+
Sbjct: 291 EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA 350
Query: 477 VKIFNQLLDLGISPDDRFCDCLLY 500
++ ++L PD+ L++
Sbjct: 351 CGLWRKMLKNNCMPDNALLSTLIH 374
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 1/232 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y V + + ++ F A + D+M + ++PN +T+ ++ +A F++M
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 323
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
PD +L +I VD A L+ + D S LI G
Sbjct: 324 ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT 383
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
++ + + G+ P+++TYN L+ M +A ++++M + PN TY L+
Sbjct: 384 EARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
+ + ++ + V +EM E G +K + +LF+ G ++AMKI +
Sbjct: 443 EGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 9/279 (3%)
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
V PN + ++ L + +P +AV FE+M PD ++I Y R+G + A
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
L+ + D VA++ +I +G G + + +M+ K T ++L A+
Sbjct: 282 LLFGEMSSP----DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
G ++ E +K G + N ++L+ Y + E A V++ ++EK +
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----ND 393
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
V +N + AH G + + M++F DMKSSG D+FT+TSL++ + + +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+I+ N+ +LV +Y K +D +IF ++ D
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 26/311 (8%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHK---AVEWFEKMP--SFECEPDDNLSASM 252
LF EML RGV P+ ITF+T+V C P ++ ++ F E + L S+
Sbjct: 616 LFQEMLTRGVNPSEITFATIV---EACHKPESLTLGTQFHGQITKRGFSSEG-EYLGISL 671
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ +Y + A +L+ + K V ++ ++ + +G Y+ L Y +M+ G
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPK---SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
P+ T+ +L R+ + I+ + + T L+ Y + + +
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
V+ EM+ + + V +N L + A G A++A+KIF M+ S PD T+ ++
Sbjct: 789 VFDEMRRRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQS-HIMPDEITFLGVLTAC 844
Query: 433 SCMGKVTEAEALLNEMI-RCGFEPNILALTSLVHLYGK---AKRADDVVKIFNQLLDLGI 488
S GKV++ + MI + G E + + +V L G+ + ADD ++ N +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN------L 898
Query: 489 SPDDRFCDCLL 499
PD R LL
Sbjct: 899 KPDARLWSSLL 909
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 50/356 (14%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-STLVACASTCSVPH-KAV 231
R V +N + + + ++ A LF M G+ + STL AC + K V
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 232 EWFEKMPSFECEPDDNL--SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
S +C D +L +S+I +Y++ G + A ++ + +W V V+ +ALI
Sbjct: 552 HCL----SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF--SSLPEWSV--VSMNALIA 603
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
Y + N + + ++ +M G P+ +T+ ++ A + + + ++ K GFS
Sbjct: 604 GYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS 662
Query: 350 NWPTYA-ALLQAYCRAR-----CS---------------------------EDALSVYKE 376
+LL Y +R C+ E+AL YKE
Sbjct: 663 EGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE 722
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M+ G D+ + + +C+ + E I + + D T +LI+MY+ G
Sbjct: 723 MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH-DLDELTSNTLIDMYAKCG 781
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+ + + +EM R N+++ SL++ Y K A+D +KIF+ + I PD+
Sbjct: 782 DMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDE 834
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 140/361 (38%), Gaps = 45/361 (12%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFR--EIKDFGRAEKLFDEMLQRGVKPNLIT 213
PE A+L FE + + H+ V R ++KD A LF EM P+++
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD---ARLLFGEM----SSPDVVA 294
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA- 272
++ +++ A+E+F M + + S++ + N+D+ L ++ A
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 273 -------------------KTEKWRV-----------DTVAFSALIKMYGMSGNYDACLS 302
K EK + V ++A+I+ Y +G +
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 303 VYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYC 362
++ DMK G + T+ +LL + + ++K + N AL+ Y
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 363 RARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN 422
+ EDA +++ M ++ D V +N + N EA +F M G D
Sbjct: 475 KCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVSDG 529
Query: 423 FTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
S + + + + + + + ++CG + ++ +SL+ +Y K D K+F+
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 483 L 483
L
Sbjct: 590 L 590
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 144/344 (41%), Gaps = 25/344 (7%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
+ V +N L ++ I G+ + F + + + PN TFS ++ STC+ VE+
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL---STCA-RETNVEF 178
Query: 234 FEK----MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD--TVAFSAL 287
+ M E + +++ +YA+ + D + +W VD TV ++ L
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS------DARRVFEWIVDPNTVCWTCL 232
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
Y +G + + V+ M+ G +P+ + + ++ R + +DA+ ++ EM
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS---- 288
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
SP+ + ++ + + C A+ + M++ + + N D +
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+ A+ G + + +SL++MYS K+ EA A + E + E N + +++ Y
Sbjct: 349 VHAEAIKLG-LASNIYVGSSLVSMYSKCEKM-EAAAKVFEALE---EKNDVFWNAMIRGY 403
Query: 468 GKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELG 511
+ V+++F + G + DD LL E+G
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 130/338 (38%), Gaps = 57/338 (16%)
Query: 194 RAEKLFDEMLQR------------------GVKPNLITFSTLVACASTCSVPHKAVEWFE 235
++ K+FDEM QR G+ + +V + C+ V + E
Sbjct: 60 KSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA----QVSYAE 115
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
K F E D SM+ +Y+ IG L + + + FS ++
Sbjct: 116 KQFDF-LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
N + ++ M +G + N L+ + R DA+ ++E +V PN +
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV----DPNTVCWT 230
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS- 414
L Y +A E+A+ V++ M+++G D + + + + G +A +F +M S
Sbjct: 231 CLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP 290
Query: 415 ---------SG----DCQPDNFTY------TSLINMYSCMGKVTEAEALL---------- 445
SG C+ Y +S+ + S +G V A ++
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
E I+ G NI +SLV +Y K ++ + K+F L
Sbjct: 351 AEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
++ + +VL+ + + + A K + EM GV P+ TF T++ S S
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+ + + D+ S ++I +YA+ G++ + ++D + R + V++++LI
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR---RSNVVSWNSLI 806
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
Y +G + L ++ M+ P+ +T+ +L A A + D + I+E M+
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 178/445 (40%), Gaps = 59/445 (13%)
Query: 66 NSQLDAKLDNPDAKSPPSSKSRIWVNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPT 125
+S++D + D + S + R + + ++ L P +LD N +
Sbjct: 50 SSEMDCEFDQEENGEKISVRKRFMESTKLSASRVL---DTLQQDCPGFNTKSALDELNVS 106
Query: 126 EQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFK--QKIKPARHVV-LYNVT 182
+S +LV+ E + + DN A LA+++F + RH Y++
Sbjct: 107 ---ISGLLVR---EVLVGILRTLSFDN--KTRCAKLAYKFFVWCGGQENFRHTANCYHLL 158
Query: 183 LKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC 242
+K+F E ++ +L DEM++ G TF+ L+ + VE F K +F
Sbjct: 159 MKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNY 218
Query: 243 EP-----------------------------DDNLSASM----IYVYA--RIGNVDMALS 267
P +D + + I ++A R+G D
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
L D + + D ++ L+ A L++ + M+ +G +P ++ + L+ +
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
RA + K +E VK G +P+ Y ++ Y E A ++KEM EKG+ +
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
YN + G EA + +M+S G C P+ Y++L+N GKV EA ++ +
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRG-CNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 448 MIRCGFEPNILALTSLVHLYGKAKR 472
M+ G VHL K K+
Sbjct: 458 MVEKG---------HYVHLISKLKK 473
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 1/240 (0%)
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
++ ++A G L D + + F+ LI G +G + + K
Sbjct: 158 LMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFN 217
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
+P +YN +L+++ K+ + +YE+M+++GF+P+ TY ++ A R ++
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ EM + G D YN+L A A+ + M+ G +P +T+LI+
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG-VEPGVIHFTTLIDG 336
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
S GK+ + ++E ++ G P+++ T ++ Y + ++F ++ + G P+
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 36/335 (10%)
Query: 154 VNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLIT 213
+N AL F+ +++ A + V Y++ + E+ A L D+M ++G +P+ T
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
++ L+ + KA F++M C+P+ + +I R G ++ A + +
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
++ + ++ALI Y G + + M+ KPN+ T+N L+ + R +
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
A + + M+ NG SP+ +Y L+ CR
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE----------------------------- 454
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
G+ + A K+ + M D +PD T+T++IN + GK A A L M+R G
Sbjct: 455 ------GHMNTAYKLLSSMNCF-DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
+ + T+L+ K + D + I L+ + I
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 159/386 (41%), Gaps = 18/386 (4%)
Query: 121 SCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYN 180
C P + +L+ GL + EA V MV K +I P+ V+ YN
Sbjct: 331 GCKPNVHTYT-VLIDGLCRDGKIEEANGVCRKMV------------KDRIFPS--VITYN 375
Query: 181 VTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
+ + + A +L M +R KPN+ TF+ L+ P+KAV ++M
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
PD +I R G+++ A L D + F+A+I + G D
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQA 360
+ M G + VT L+ + + + RDA I E +VK + +L
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 361 YCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQP 420
+ ++ L++ ++ + G V Y L D G+ + +I MK SG C P
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG-CLP 614
Query: 421 DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
+ + YT +IN G+V EAE LL+ M G PN + T +V Y + D ++
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 481 NQLLDLGISPDDRFCDCLL--YVATQ 504
+++ G +DR LL +V +Q
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQ 700
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+S++ A++ +A Y R + + + V + + ++ +G +A S +
Sbjct: 164 SSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK 223
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-GFSPNWPTYAALLQAYCRARCSE 368
+G + +LL R RDA +++ M K +PN +Y+ L+ C E
Sbjct: 224 IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE 283
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
+A + +M EKG Y +L G D+A +F +M G C+P+ TYT L
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG-CKPNVHTYTVL 342
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
I+ GK+ EA + +M++ P+++ +L++ Y K R
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
+V G + N Y++LL ++ + A Y M +GF Y ++ A C+ +
Sbjct: 152 EVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211
Query: 368 EDALSVYKEMKEKGKDVDK-VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
E A ++ + G +D + ++L C N +A+K+F M C P++ +Y+
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL-NLRDALKVFDVMSKEVTCAPNSVSYS 270
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
LI+ +G++ EA L ++M G +P+ T L+ D +F++++
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR 330
Query: 487 GISPD 491
G P+
Sbjct: 331 GCKPN 335
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 7/339 (2%)
Query: 166 FKQKIKPARHVVLYNVTLKLFREIKDFGRAEK---LFDEMLQRGVKPNLITFSTLVACAS 222
F ++++ + V L N K+ R G E+ +FD + + G++ N + + L+
Sbjct: 143 FVERMRGDKLVTL-NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
+A ++ S P+ + I+ + + V+ AL K +R +
Sbjct: 202 KEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
+++ +I+ Y + + S+M+ G+ PN +TY ++ ++ K +A + M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYK-EMKEKGKDVDKVLYNMLFDMCAHFGN 401
++G P+ Y L+ RA E+A V++ EM E G ++ YN + M H
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILAL 460
D+A+++ +M+SS C PD TY L+ G V E LL EM+ + +
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
T L+ +A + +F +++ I+P R C LL
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 51/275 (18%)
Query: 263 DMALSLYDRAK--------TEKWRVDTVA----FSALIKMYGMSGNYDACLSVYSDMKVL 310
DMA+ + +AK E+ R D + + +++ + +G ++ + ++ +
Sbjct: 125 DMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEF 184
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G + N + N LL + + KR A+ + ++ K+ +PN T+ + +C+A E+A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
L +EMK G F C +YT++I
Sbjct: 244 LWTIQEMKGHG-----------FRPCV-------------------------ISYTTIIR 267
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
Y + + +L+EM G PN + T+++ K ++ +++ ++ G P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 491 DDRFCDCLLYVATQIPRQELGKITACIEKAKPKLG 525
D F +CL++ + R E + +E P+LG
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFRVE--MPELG 360
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 7/339 (2%)
Query: 166 FKQKIKPARHVVLYNVTLKLFREIKDFGRAEK---LFDEMLQRGVKPNLITFSTLVACAS 222
F ++++ + V L N K+ R G E+ +FD + + G++ N + + L+
Sbjct: 143 FVERMRGDKLVTL-NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
+A ++ S P+ + I+ + + V+ AL K +R +
Sbjct: 202 KEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
+++ +I+ Y + + S+M+ G+ PN +TY ++ ++ K +A + M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYK-EMKEKGKDVDKVLYNMLFDMCAHFGN 401
++G P+ Y L+ RA E+A V++ EM E G ++ YN + M H
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILAL 460
D+A+++ +M+SS C PD TY L+ G V E LL EM+ + +
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
T L+ +A + +F +++ I+P R C LL
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 51/275 (18%)
Query: 263 DMALSLYDRAK--------TEKWRVDTVA----FSALIKMYGMSGNYDACLSVYSDMKVL 310
DMA+ + +AK E+ R D + + +++ + +G ++ + ++ +
Sbjct: 125 DMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEF 184
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G + N + N LL + + KR A+ + ++ K+ +PN T+ + +C+A E+A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
L +EMK G F C +YT++I
Sbjct: 244 LWTIQEMKGHG-----------FRPCV-------------------------ISYTTIIR 267
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
Y + + +L+EM G PN + T+++ K ++ +++ ++ G P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 491 DDRFCDCLLYVATQIPRQELGKITACIEKAKPKLG 525
D F +CL++ + R E + +E P+LG
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFRVE--MPELG 360
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 19/251 (7%)
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
L R + K V T + + L+K G G L+ + MK KP++ YN ++ A
Sbjct: 150 LRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINA 209
Query: 326 MGRAKRARDAKTIYEEMVKNGFS--PNWPTYAALLQAYCR-----------ARCSEDALS 372
+ R + A+ + ++M GF P+ TY L+ +YCR R +A
Sbjct: 210 LCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANR 269
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+++EM +G D V YN L D C A+++F DMK+ G C P+ TY S I Y
Sbjct: 270 MFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG-CVPNQVTYNSFIRYY 328
Query: 433 SCMGKVTEAEALLNEMIRCGFE-PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
S ++ A ++ M + G P T L+H + +RA + + ++++ G+ P
Sbjct: 329 SVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPR 388
Query: 492 DR----FCDCL 498
+ CD L
Sbjct: 389 EYTYKLVCDAL 399
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 150/373 (40%), Gaps = 44/373 (11%)
Query: 88 IWVNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAM 147
+++PRS ++ + SPL K + + ++++ SE+LV G G + ++
Sbjct: 54 FFISPRSIGRQKGFRHR-----SPL----KQRNLSDESQRRRSEVLVLGPGAYMDPKKVS 104
Query: 148 IVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGV 207
I L + AL F + + + + L + DF ++ +R
Sbjct: 105 IGL------QKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRREN 158
Query: 208 KPNLIT---FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
N++T + L+ C +A+ F +M + C+PD ++I R+GN
Sbjct: 159 GKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKK 218
Query: 265 ALSLYDRAKTEKWRV--DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL 322
A L D+ + +R DT ++ LI Y G C
Sbjct: 219 ARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR----------------- 261
Query: 323 LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
+R +A ++ EM+ GF P+ TY L+ C+ AL ++++MK KG
Sbjct: 262 -------RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
++V YN + + A+++ MK G P + TYT LI+ + EA
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEAR 374
Query: 443 ALLNEMIRCGFEP 455
L+ EM+ G P
Sbjct: 375 DLVVEMVEAGLVP 387
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 2/298 (0%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC-EPDDNLSASM 252
+A ++ +EM++ G KPN+ T + L+ KA F K+ + +P+ + SM
Sbjct: 305 QAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM 364
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I Y + ++ A L+ R K + + ++ LI + +G++ + + M G
Sbjct: 365 IGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGF 424
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
PN+ TYN + ++ + RA +A + + G + TY L+Q C+ AL+
Sbjct: 425 MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALA 484
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+ M + G + D L N+L E+ ++F + S G P TYTS+I+ Y
Sbjct: 485 FFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG-LIPTKETYTSMISCY 543
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
G + A + M R G P+ SL+ K D+ K++ ++D G+SP
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 141/336 (41%), Gaps = 10/336 (2%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVP 227
Q + P+ + N L++ E+ AE +FDEM RGV P+ ++ +V
Sbjct: 176 QGLTPSS--ITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+A W M PD+ ++ G V+ A+ + + ++ + + F++L
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK-NG 346
I G+ + +M G KPN+ T+ L+ + + A ++ ++V+ +
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD---MCAHFGNAD 403
+ PN TY +++ YC+ A ++ MKE+G + Y L + FG A
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
E M + D P+ +TY + I+ + EA LLN+ CG E + + T L
Sbjct: 414 ELMNLMGD----EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 464 VHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ K + + F ++ G D R + L+
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 151/375 (40%), Gaps = 58/375 (15%)
Query: 140 NVTEREAMIVLDNMVNPETALLA--FEYFKQKIKPARHVV-LYNVT-------------- 182
++T +A+ V+ ++ + +++A F Y+ + RH + LY VT
Sbjct: 88 SLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAH 147
Query: 183 ------LKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
L+ F EI A + +M +G+ P+ IT + ++ A + A F++
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M PD + M+ R G + A + D + ++ +G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ + + M LG KPN++ + +L+ + + + A + EEMV+NG+ PN T+ A
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ C+ G ++A ++F + S
Sbjct: 328 LIDGLCKR-----------------------------------GWTEKAFRLFLKLVRSD 352
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+P+ TYTS+I Y K+ AE L + M G PN+ T+L++ + KA
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 477 VKIFNQLLDLGISPD 491
++ N + D G P+
Sbjct: 413 YELMNLMGDEGFMPN 427
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 138/348 (39%), Gaps = 45/348 (12%)
Query: 127 QQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKI-----KPARHVVLYNV 181
+ + EM+ G NV A+I D + AF F + + KP H Y
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALI--DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT--YTS 363
Query: 182 TLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
+ + + RAE LF M ++G+ PN+ T++TL+ +A E M
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
P+ + I + A L ++A + D V ++ LI+ + + L
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
+ + M G + +M N L+ A R K+ ++++ +++ +V G P TY +++ Y
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
C+ G+ D A+K F +MK G C PD
Sbjct: 544 CKE-----------------------------------GDIDLALKYFHNMKRHG-CVPD 567
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
+FTY SLI+ V EA L MI G P + +L + Y K
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 154/379 (40%), Gaps = 36/379 (9%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
P+ AL F+ ++ + YN L F E K + + E LF GV PNL T++
Sbjct: 94 PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L+ + KA + + M +PD +++I A+ G +D AL L+D
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARD 334
D ++ LI + ++ + ++ + + PN+ T+N ++ + + R D
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML-- 392
I+E M +N + TY++L+ C A + A SV+ E+ E+ +D V YN +
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 393 -FDMCAHF-------------------------------GNADEAMKIFADMKSSGDCQP 420
F C G DEA I+ M + G
Sbjct: 334 GFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG-YAA 392
Query: 421 DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
D TY I+ G V +A ++ E+ G ++ A S++ K KR ++ +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 481 NQLLDLGISPDDRFCDCLL 499
++ G+ + C+ L+
Sbjct: 453 KEMSKHGVELNSHVCNALI 471
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 160/361 (44%), Gaps = 38/361 (10%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQ-RGVKPNLITFSTLVACASTCSVPHKAVEWF 234
V YN+ + F + KD A +L+D +L+ V PN+ T + +++ S C ++ +
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
E+M E E D +S+I+ GNVD A S+++ K +D V ++ ++ +
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G L ++ M+ + N+V+YN L+ + + +A I+ M G++ + TY
Sbjct: 339 GKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 355 -----------------------------------AALLQAYCRARCSEDALSVYKEMKE 379
A+++ C+ + E+A ++ KEM +
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVT 439
G +++ + N L EA +M +G C+P +Y LI GK
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG-CRPTVVSYNILICGLCKAGKFG 516
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
EA A + EM+ G++P++ + L+ + ++ D +++++Q L G+ D + L+
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 500 Y 500
+
Sbjct: 577 H 577
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 143/320 (44%), Gaps = 1/320 (0%)
Query: 171 KPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKA 230
K + ++V YN+ +K E A ++ M +G + T+ + +KA
Sbjct: 354 KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ +++ S D AS+I + ++ A +L +++ +ALI
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+M G +P +V+YN L+ + +A + +A +EM++NG+ P+
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
TY+ LL CR R + AL ++ + + G + D +++N+L G D+AM + A
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
+M+ +C + TY +L+ + +G A + M + G +P+I++ +++
Sbjct: 594 NMEHR-NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 471 KRADDVVKIFNQLLDLGISP 490
+ ++ F+ + GI P
Sbjct: 653 RGVSYAMEFFDDARNHGIFP 672
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 146/327 (44%), Gaps = 12/327 (3%)
Query: 182 TLKLFREIKDFGRAEKLFDEMLQR-GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
LKL + K+ A LFD + G + + + ++ S + + E + S
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV--AFSALIKMYGMSGNYD 298
EC+ D++++ S+I Y + D AL ++ R + E + + +++ L+ + + +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMR-EIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
S+++ + G PN+ TYN L+ + K A+ + M K GF P+ +Y+ ++
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+A +DAL ++ EM E+G D YN+L D + AM+++ +
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
P+ T+ +I+ S G+V + + M + E ++ +SL+H A D
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 479 IFNQLLDLGISPD--------DRFCDC 497
+FN+L + S D FC C
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRC 338
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 18/364 (4%)
Query: 139 ENVTEREAMIVLDNMVNPETALLAFEYFKQ-KIKPARH----VVLYNVTLKLFREIKDFG 193
ENVT ++L + + A F++ + +P R VVLYN + L I +
Sbjct: 172 ENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVY 231
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
E+++ M G IT+S LV+ C A++ +++M + + ++ +MI
Sbjct: 232 ETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI 291
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ D+AL ++ + + + VA + LI G +G VYS +K LG K
Sbjct: 292 SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK 351
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVK--NGFSPNWPTYAALLQAYCRARCSEDAL 371
P+ T+N LL A+ +A R D ++ +M++ N N Y + + + E A+
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLF-DMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV 410
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ EM+ G V YN++ C + A+ ++ M + DC+P+ FTY SL+
Sbjct: 411 KLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHM-AQRDCKPNTFTYLSLVR- 468
Query: 432 YSCM-GKV-TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
SC+ G + E E +L ++ EP++ + +H + +++ ++ ++G+
Sbjct: 469 -SCIWGSLWDEVEDILKKV-----EPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLE 522
Query: 490 PDDR 493
PD +
Sbjct: 523 PDGK 526
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 40/247 (16%)
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQA 360
L ++ M+ LG +PN N+ L + R + A T++E M K + TY+ +L+A
Sbjct: 127 LELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYSLMLKA 185
Query: 361 YCRARCSEDALSVYKEMKEKGKD---VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ E AL +++E++ + K D VLYN +C N E +I+ MK G
Sbjct: 186 VAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGH 245
Query: 418 CQPDNFTYTSLIN-----------------------------MYSCMGKVTEAEA----- 443
+ TY+ L++ MY+ + T+ E
Sbjct: 246 IGTE-ITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLAL 304
Query: 444 -LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
+ M++ G +PN++A +L++ GKA + V K+++ L LG PD+ + LL
Sbjct: 305 KIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTAL 364
Query: 503 TQIPRQE 509
+ R E
Sbjct: 365 YKANRYE 371
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 5/238 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +LFD M G++PN ++ ++C KA FE M E S M+
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSL-MLK 184
Query: 255 VYARIGNVDMALSLYDRAKTEKWR---VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
A + + AL ++ + E R D V ++ I + G N ++ MK G
Sbjct: 185 AVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDG 244
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
+TY+ L+ R R+ A +Y+EMV N S A++ A + + AL
Sbjct: 245 HIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLAL 304
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
+++ M +KG + V N L + G K+++ +KS G +PD +T+ +L+
Sbjct: 305 KIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH-KPDEYTWNALL 361
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 151/339 (44%), Gaps = 48/339 (14%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
L NV + ++ + A +LFD+M QR N+I+++T+++ S C + KA+E M
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 238 ------PS-------------------FEC-------EPDDNLSASMIYVYARIGNVDMA 265
P+ C E D + +++I V+A++G + A
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
LS++D T D + ++++I + + D L ++ MK G T ++L A
Sbjct: 214 LSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
+ +VK + + AL+ YC+ EDAL V+ +MKE+ D
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----D 323
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
+ ++ + A G + EA+K+F MKSSG +P+ T ++ S G + +
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGT-KPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 446 NEMIRC-GFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
M + G +P ++ L GKA + DD VK+ N++
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
+D RA K D + G+ + T+S L+ C + H+ + P L
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+I +Y + ++ A L+D+ + ++++ +I Y + L + M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
+PN+ TY+++L + D + ++ ++K G + +AL+ + + ED
Sbjct: 156 DNVRPNVYTYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
ALSV+ EM D +++N + A +D A+++F MK +G + T TS++
Sbjct: 213 ALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVL 267
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+C G + + ++ +++ +LV +Y K +D +++FNQ+
Sbjct: 268 R--ACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 5/242 (2%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D F LI+ YG +G + ++ MK LG + + +YN+L + R R AK +
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+MV G P TY +L + + E AL +++MK +G D +N + + F
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
DEA K+F +MK + P +YT++I Y + +V + + EM G EPN
Sbjct: 304 KKMDEAEKLFVEMKGN-KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEK 519
++L+ A + + I ++ I+P D +++ + + + G + A E
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS----IFLKLLVSQSKAGDMAAATEV 418
Query: 520 AK 521
K
Sbjct: 419 LK 420
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 182/443 (41%), Gaps = 11/443 (2%)
Query: 51 FPLTQSKTHFSLQPLNSQLDAKLD----NPDAKSPPSSKSRIWVNPRSPRAKQLLKKSYA 106
P + + + FSL L S ++ NP+ +SP +KS N S + L ++
Sbjct: 20 LPRSSNSSLFSLPRLFSTIEETQTPANANPETQSP-DAKSETKKNLTSTETRPLRERFQR 78
Query: 107 ATSSPLEKLAKSLDSCNPTEQQV-SEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEY 165
EKL ++ C + + + L + + V E + +V + + + A ++
Sbjct: 79 GKRQNHEKLEDTI--CRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQF 136
Query: 166 FK--QKIKPARHVVLYNVTL-KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
F+ ++ RH ++ + K+ E+ A + +M ++GV + F L+
Sbjct: 137 FRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYG 196
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
+ ++V+ F+KM E S+ V R G MA +++ +E
Sbjct: 197 KAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRH 256
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
++ ++ + +S + L + DMK G P+ T+N ++ R K+ +A+ ++ EM
Sbjct: 257 TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
N P+ +Y +++ Y +D L +++EM+ G + + Y+ L G
Sbjct: 317 KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKM 376
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
EA I +M + DN + L+ S G + A +L M
Sbjct: 377 VEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGV 436
Query: 463 LVHLYGKAKRADDVVKIFNQLLD 485
L+ KA + +K+ + L++
Sbjct: 437 LIENQCKASAYNRAIKLLDTLIE 459
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 10/266 (3%)
Query: 234 FEKMPSFECEPDDNLSASM-IYVYARIGNVDMALSLYDRAKTEK------WRVDTVAFSA 286
FEK+ + D S ++ I+ + G++D ALSL+ K + D +++
Sbjct: 235 FEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNS 294
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
LI + + G L V+ ++KV G +P+ TY L+ ++ R DA IY EM NG
Sbjct: 295 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG 354
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
F P+ Y LL +AR +A ++++M ++G YN+L D G A+
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCM-GKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+F D+K G D T+ S++ + C GK+ A L+ EM GF +++ ++SL+
Sbjct: 415 TLFCDLKKKGQF-VDAITF-SIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLI 472
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPD 491
+ K R D K+ + + + P+
Sbjct: 473 GFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
PD S+I+V G AL ++D K D + LI+ S D + +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
Y +M+ G P+ + YN LL +A++ +A ++E+MV+ G + TY L+ R
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
+E +++ ++K+KG+ VD + ++++ G + A+K+ +M++ G D
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG-FSVDLV 465
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
T +SL+ + G+ E L+ + PN+L
Sbjct: 466 TISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVL 500
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
++++ DT +++ I +G G+ DA LS++ +MK +
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMK-------------------------E 276
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
++Y + F P+ TY +L+ C ++DAL V+ E+K G + D Y +L
Sbjct: 277 RSSVY----GSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
C D+AM+I+ +M+ +G PD Y L++ KVTEA L +M++ G
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNG-FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY--VATQIPRQELGK 512
+ L+ + RA+ +F L G +F D + + V Q+ R+ GK
Sbjct: 392 ASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG-----QFVDAITFSIVGLQLCRE--GK 444
Query: 513 ITACIE 518
+ ++
Sbjct: 445 LEGAVK 450
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 241 ECEPDD---NLSASMIYVYARIGNVDMALSLYDRAKTEKWR-VDTVAFSALIKMYGMSGN 296
E +PD ++ + + +Y G++ +A L++ + + +++++ + G
Sbjct: 586 EAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGY 645
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ V M ++ TYN ++ +G+ RA A + + + K G + Y
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNT 705
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
L+ A +A ++A ++ MK G + D V YN + ++ + G EA K M +G
Sbjct: 706 LINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Query: 417 DCQPDNFTYTSL 428
C P++ T T L
Sbjct: 766 -CLPNHVTDTIL 776
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 13/177 (7%)
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
TY +++ ++ + + A V +M E D YN++ G AD A + +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
G D Y +LIN ++ EA L + M G P++++ +++ + KA +
Sbjct: 692 TKQGG-YLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 473 ADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLGSVVR 529
+ K +LD G P+ L Y+ + +EKA+ K S VR
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVTDTILDYLGKE------------MEKARFKKASFVR 795
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 148/365 (40%), Gaps = 42/365 (11%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
++ Y L K +G + E+ Q G K + I F+ ++ S AV+
Sbjct: 80 LISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALL 139
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT----VAFSALIKMY 291
KM P + ++I Y G + + L D E+ VD F+ L++ +
Sbjct: 140 KMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD-LMLEEGNVDVGPNIRTFNVLVQAW 198
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA-MGRAKRARDAKTIYEEMV-KNGFSP 349
+ V M+ G +P+ VTYN + + + + R + E+MV K P
Sbjct: 199 CKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
N T ++ YCR D L + MKE + + V++N L + + D ++
Sbjct: 259 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVL 318
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
MK + + D TY++++N +S G + +A + EM++ G +P+ A + L Y +
Sbjct: 319 TLMKEC-NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 470 AKR----------------------------------ADDVVKIFNQLLDLGISPDDRFC 495
AK DD +++FN++ G+SP+ +
Sbjct: 378 AKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 496 DCLLY 500
+ L++
Sbjct: 438 ETLMW 442
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 4/311 (1%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC-ASTCSVPHKAVEW 233
++ +NV ++ + + K A ++ +M + GV+P+ +T++T+ C E
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 234 FEKMPSFE-CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
EKM E +P+ ++ Y R G V L R K + + V F++LI +
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
+ D V + MK K +++TY+ ++ A A A +++EMVK G P+
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
Y+ L + Y RA+ + A + + + + + + ++ C++ G+ D+AM++F M
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSN-GSMDDAMRVFNKM 425
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
G P+ T+ +L+ Y + + +AE +L M CG +P L + A
Sbjct: 426 CKFG-VSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 473 ADDVVKIFNQL 483
D+ K N L
Sbjct: 485 TDESNKAINAL 495
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 42/315 (13%)
Query: 184 KLFREIKDFGR---AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
KL + + GR A+ +F + + G +P+LI+++TL+A +
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT------------------ 91
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
V + G++ +S +++ T ++D++ F+A+I + SGN +
Sbjct: 92 --------------VQKQYGSISSIVSEVEQSGT---KLDSIFFNAVINAFSESGNMEDA 134
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG---FSPNWPTYAAL 357
+ MK LG P TYN L+ G A + + + + M++ G PN T+ L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA-MKIFADMKSSG 416
+QA+C+ + E+A V K+M+E G D V YN + G A ++ M
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+P+ T ++ Y G+V + + M E N++ SL++ + + D +
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 477 VKIFNQLLDLGISPD 491
++ + + + D
Sbjct: 315 DEVLTLMKECNVKAD 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
+V+ + G +P++++Y LL AM K+ +I E+ ++G + + A++ A+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAF 125
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG--DCQ 419
+ EDA+ +MKE G + YN L G + + ++ M G D
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDV 476
P+ T+ L+ + KV EA ++ +M CG P+ + ++ Y G+ RA+
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 477 VKIFNQLLDLGISPDDRFCDCLL 499
V + ++ P+ R C ++
Sbjct: 246 V-VEKMVMKEKAKPNGRTCGIVV 267
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 12/277 (4%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEW 233
+V+ +N + + + +A LFD M+ KP+ IT TL+ AC +T S+ +
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE-RGQMI 555
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
+ E E + +LSA++I +YA+ G+++ + L+D + D V ++ +I YGM
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK----DAVCWNVMISGYGM 611
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G+ ++ ++++ M+ KP T+ LL A A K ++ +M + PN
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKH 671
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
Y+ L+ R+ E+A S M D V++ L C G + +++ A+
Sbjct: 672 YSCLVDLLSRSGNLEEAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGIRM-AERA 727
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
+ D Q D + Y L NMYS GK EAE EM+R
Sbjct: 728 VASDPQNDGY-YIMLANMYSAAGKWEEAER-AREMMR 762
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 139/320 (43%), Gaps = 13/320 (4%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N L ++ + + AEKLF + + G K ++T++ K +E F K+ +
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKE---AWNTMLKGYGKMKCHVKCIELFRKIQN 426
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
E D + S+I + IG V + SL+ + ++LI +YG G+
Sbjct: 427 LGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTV 486
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
++ + A N++T+N ++ + +++ A +++ MV F P+ T LL
Sbjct: 487 AWRMFCE-----ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLM 541
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
A E +++ + E +++ L L DM A G+ +++ ++F +G+ Q
Sbjct: 542 ACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF----DAGN-Q 596
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
D + +I+ Y G V A AL ++M +P +L+ A + K+
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 480 FNQLLDLGISPDDRFCDCLL 499
F ++ + P+ + CL+
Sbjct: 657 FLKMHQYDVKPNLKHYSCLV 676
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 167/431 (38%), Gaps = 68/431 (15%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVE 232
R + L+N +K D+ R+ F ML G P+ T +V ACA +
Sbjct: 88 RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE--------LL 139
Query: 233 WFE----------KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
WF K F+ + + AS +Y Y++ G + A ++D D V
Sbjct: 140 WFHVGTFVHGLVLKHGGFD--RNTAVGASFVYFYSKCGFLQDACLVFDEMPDR----DVV 193
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGA---KPNMVTYNNLLYAMGRAKRARDAKTIY 339
A++A+I + +G + L M G+ KPN T A ++ + ++
Sbjct: 194 AWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLH 253
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
VKNG + + +++ Y ++ +A ++E+ D D + + A
Sbjct: 254 GFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG----DEDMFSWTSIIASLARS 309
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR--------- 450
G+ +E+ +F +M++ G PD + LIN M V + +A +IR
Sbjct: 310 GDMEESFDMFWEMQNKG-MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV 368
Query: 451 --------CGF---------------EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
C F E N A +++ YGK K +++F ++ +LG
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG 428
Query: 488 ISPDDRFCDCLLYVATQIPRQELGKITAC-IEKAKPKLG-SVVRYLTEEHEGDGDFRKEA 545
I D ++ + I LGK C + K L SVV L + + GD A
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL-TVA 487
Query: 546 LELFNSIDDDV 556
+F D +V
Sbjct: 488 WRMFCEADTNV 498
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 5/332 (1%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
AF + K + P + +N+ + + +D A + + + G+ + ++TL++
Sbjct: 455 AFRFTKLILNPT--MSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSC 512
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+ E F +M + E + + ++I AR G V A Y +++ + D
Sbjct: 513 AKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDR 572
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLG--AKPNMVTYNNLLYAMGRAKRARDAKTIY 339
V F+ALI G SG D V ++MK P+ ++ L+ A A + AK +Y
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+ + K G Y + + ++ + A S+YK+MKEK D+V ++ L D+ H
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
DEA I D KS G + +Y+SL+ +A L ++ P I
Sbjct: 693 KMLDEAFGILQDAKSQG-IRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIST 751
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ +L+ + + ++ +++ LG+ P+
Sbjct: 752 MNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 1/220 (0%)
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
F+ L+ + S + + V ++ G + Y L+ + ++ + ++ +M
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
+G N T+ AL+ RA A Y ++ K D+V++N L C G D
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVD 589
Query: 404 EAMKIFADMKS-SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
A + A+MK+ + PD+ + +L+ G+V A+ + + + G T
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
V+ K+ D I+ + + ++PD+ F L+ VA
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVA 689
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 5/261 (1%)
Query: 159 ALLAFEYFKQK-IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG--VKPNLITFS 215
A A+ + K +KP R V++N + + RA + EM + P+ I+
Sbjct: 556 AFGAYGILRSKNVKPDR--VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIG 613
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L+ +A E ++ + + + + ++ G+ D A S+Y K +
Sbjct: 614 ALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D V FSALI + G + D + D K G + ++Y++L+ A AK + A
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA 733
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+YE++ P T AL+ A C A+ E+K G + + Y+ML
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Query: 396 CAHFGNADEAMKIFADMKSSG 416
+ + + K+ + K G
Sbjct: 794 SERKDDFEVSFKLLSQAKGDG 814
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
RA++++ + + G++ ++ V S A ++ M + PD+ +++I
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
V +D A + AK++ R+ T+++S+L+ + ++ L +Y +K + +
Sbjct: 687 DVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLR 746
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P + T N L+ A+ + A +E+ G PN TY+ L+ A R E + +
Sbjct: 747 PTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKL 806
Query: 374 YKEMKEKGKDVDKVLYNMLFDMC 396
+ K G + ++ + +C
Sbjct: 807 LSQAKGDGVSPNLIMCRCITSLC 829
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ Y +K F + + A +++DEML++G+KP+ ++T KA E
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 236 KMPSFECE-PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M + + PD + I ++GN+ A+ + D V ++ +I+ Y +
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G + ++Y +M P+++TY L+Y +A R A EM K G PN T+
Sbjct: 564 GQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
ALL C+A ++A +M+E+G +K Y ML F +E +K++ +M
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 415 SGDCQPDNFTYTSLI 429
+ +PD +T+ +L
Sbjct: 684 K-EIEPDGYTHRALF 697
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 6/310 (1%)
Query: 192 FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS 251
F A + DEML G+ P T++ + A E M + PD +
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNT 379
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
+++ Y ++G A L+D + V ++ LI SGN + + +M
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
P+++TY L+ + A +Y+EM++ G P+ Y R S+ A
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 372 SVYKEMKEKGKDV-DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+++EM D +YN+ D GN +A++ + G PD+ TYT++I
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG-LVPDHVTYTTVIR 558
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
Y G+ A L +EM+R P+++ L++ + KA R + + ++ G+ P
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 491 DDRFCDCLLY 500
+ + LLY
Sbjct: 619 NVMTHNALLY 628
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 41/337 (12%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E +LL + I P+ +V YN + E + A++L +EM + + P++IT++T
Sbjct: 392 EASLLFDDLRAGDIHPS--IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR-AKTE 275
LV A E +++M +PD + R+G+ D A L++ T+
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D ++ I GN + + +G P+ VTY ++ + + A
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN-MLFD 394
+ +Y+EM++ P+ TY L+ + +A E A EMK++G + + +N +L+
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
MC GN DEA + M+ G P+ ++YT LI+ C FE
Sbjct: 630 MCKA-GNIDEAYRYLCKMEEEG-IPPNKYSYTMLISK------------------NCDFE 669
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ ++VVK++ ++LD I PD
Sbjct: 670 -----------------KWEEVVKLYKEMLDKEIEPD 689
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 8/300 (2%)
Query: 195 AEKL---FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS 251
AEK F++M+++G P++ + ++ + +KA +E M P +
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
M+ + G+++ ++ K V ++ LI + +G + + DM+ G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
++N L+ + DA + +EM+ G P TY + A C +DA
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ M D V YN L G EA +F D++ +GD P TY +LI+
Sbjct: 364 ELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLR-AGDIHPSIVTYNTLIDG 418
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G + A+ L EM P+++ T+LV + K ++++++L GI PD
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 179/413 (43%), Gaps = 38/413 (9%)
Query: 112 LEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIV----LDN-----------MVNP 156
L++ + L + QQ E+L+ G + +A+ V LDN ++
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEK---LFDEMLQRGVKPNLIT 213
+ L + +Y ++ R +Y V LFR + G E+ L+ +M + GV+ + T
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIY-VWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 214 FS-TLVAC-ASTCSVPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY 269
++ L AC AS C+V H K E + + +++ +YAR G VD A ++
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM--KVLGAKPNMVTYNNLLYAMG 327
+ V++SA+I Y +G L + +M + + PN VT ++L A
Sbjct: 241 GGMPVR----NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
K I+ +++ G P +AL+ Y RC + L V + + ++ D D V
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVISALVTMY--GRCGK--LEVGQRVFDRMHDRDVV 352
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
+N L G +A++IF +M ++G P T+ S++ S G V E + L
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANG-ASPTPVTFVSVLGACSHEGLVEEGKRLFET 411
Query: 448 MIR-CGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
M R G +P I +V L G+A R D+ K+ D+ P + LL
Sbjct: 412 MWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ---DMRTEPGPKVWGSLL 461
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 132/318 (41%), Gaps = 18/318 (5%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
HV + + ++ A +F M R N++++S ++AC + +A+ F
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVR----NVVSWSAMIACYAKNGKAFEALRTF 271
Query: 235 EKM--PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+M + + P+ S++ A + ++ ++ SAL+ MYG
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G + V+ M ++V++N+L+ + G + A I+EEM+ NG SP
Sbjct: 332 RCGKLEVGQRVFDRMH----DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387
Query: 353 TYAALLQAYCRARCSEDALSVYKEM-KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
T+ ++L A E+ +++ M ++ G Y + D+ DEA K+ D
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP-NILALTSLVHLYGKA 470
M++ +P + SL+ G V AE + EP N L +Y +A
Sbjct: 448 MRT----EPGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGNYVLLADIYAEA 501
Query: 471 KRADDVVKIFNQLLDLGI 488
+ D+V ++ L G+
Sbjct: 502 QMWDEVKRVKKLLEHRGL 519
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 16/240 (6%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ--RGVKPNLITF-STLVACASTCSVPH 228
P R+VV ++ + + + A + F EM++ + PN +T S L ACAS ++
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 229 -KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
K + + + + ++++ +Y R G +++ ++DR D V++++L
Sbjct: 304 GKLIHGYILRRGLDSILP--VISALVTMYGRCGKLEVGQRVFDRMHDR----DVVSWNSL 357
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK-NG 346
I YG+ G + ++ +M GA P VT+ ++L A + K ++E M + +G
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMK-EKGKDVDKVLYNMLFDMCAHFGNADEA 405
P YA ++ RA ++A + ++M+ E G V + L C GN + A
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV----WGSLLGSCRIHGNVELA 473
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 167/415 (40%), Gaps = 84/415 (20%)
Query: 109 SSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQ 168
SSP EK+ + LD C E++++ + N ++ + +L +V ++ L+
Sbjct: 91 SSP-EKIKRILDKCGI--DLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLS------ 141
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
+LYN L + +++ F ++FDEM +R N T+ L+ +
Sbjct: 142 ------SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVD 195
Query: 229 KAVEWFEKMPSFECEPD---------------------------------DNLSASMIY- 254
+AV FE+ F + D D + +MI
Sbjct: 196 EAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILN 255
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ +GNV A + K R D V++ +I G + +Y M P
Sbjct: 256 GWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNP 315
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++ NN++ A+ KR +A ++ E+ + G PN TY +LL+ C+ R +E +
Sbjct: 316 DVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELV 375
Query: 375 KEMKEKG--------------------KDVDKV--------------LYNMLFDMCAHFG 400
+EM+ KG KDVD V LYN++F + +
Sbjct: 376 EEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWD 435
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
++ +I+++M+ SG PD TYT I+ GK+ EA + EM+ G P
Sbjct: 436 KEEKVREIWSEMERSG-LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 37/242 (15%)
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
YN +L +G+ +R + +++EM K N TY LL Y A ++A+ V++ K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 379 EKGKDVDKVLY----------------------------------NMLFDMCAHFGNADE 404
E G D D V + NM+ + GN E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
A + + D+ +S C+PD +Y ++IN + GK+ +A L M P++ +++
Sbjct: 266 AKRFWKDIIAS-KCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 465 HLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKL 524
KR + +++F ++ + G P+ + LL +I R E K+ +E+ + K
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE--KVWELVEEMELKG 382
Query: 525 GS 526
GS
Sbjct: 383 GS 384
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP--SFECEPDDNLSASM 252
A ++F E+ ++G PN++T+++L+ K E E+M C P+D + +
Sbjct: 336 ALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYL 395
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ R +VD+ L +R K + + ++ + ++Y + ++S+M+ G
Sbjct: 396 LKYSQRSKDVDIVL---ERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL 452
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
P+ TY ++ + + +A + ++EM+ G P T L Q + R + L
Sbjct: 453 GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPRVEDKML 511
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 141/342 (41%), Gaps = 44/342 (12%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLK----LFREIKDFGRAE---KLFDEMLQRGVKPNL 211
AL ++ + K + Y +T K L + FG E +L+ EML+ V P++
Sbjct: 96 ALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDI 155
Query: 212 ITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDR 271
TF+TLV +A ++ + C+PD S I + R VD A
Sbjct: 156 YTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA------ 209
Query: 272 AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
V+ +M G N V+Y L+Y + AK+
Sbjct: 210 -----------------------------FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
+A ++ +M + PN TY L+ A C + +A++++K+M E G D +Y +
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 392 LFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRC 451
L DEA + M +G P+ TY +LI + C V +A LL++M+
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENG-LMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQ 358
Query: 452 GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
P+++ +L+ + D ++ + + + G+ P+ R
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQR 400
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
K N+ +Y +L+ + + + I M+K S N A + +CR D+
Sbjct: 57 KHNVTSYASLVTLLCSQEIPYEVPKITILMIK---SCNSVRDALFVVDFCRTMRKGDSFE 113
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+ ++ K YN L A FG +E +++ +M PD +T+ +L+N Y
Sbjct: 114 IKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDL-VSPDIYTFNTLVNGY 165
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+G V EA+ + +I+ G +P+ TS + + + K D K+F ++ G
Sbjct: 166 CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 3/194 (1%)
Query: 162 AFEYFKQKIKPA--RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
AF+ FK+ + R+ V Y + E K A L +M PN+ T++ L+
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+A+ F++M +PDD + +I + +D A L +
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ + ++ALIK + N + + S M P+++TYN L+ + A +
Sbjct: 329 NVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Query: 340 EEMVKNGFSPNWPT 353
M ++G PN T
Sbjct: 388 SLMEESGLVPNQRT 401
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 140/314 (44%), Gaps = 3/314 (0%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN + + + + F + +EM +G+ + TF+ + + KAV FE M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
++ + ++ R A L+D+ K E++ + + ++ L+ + N
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+++DM G KP++V +N +L + R+++ DA ++ M G PN +Y ++
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ +C+ E A+ + +M + G D +Y L D ++ +M+ G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH- 434
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
PD TY +LI + + A + N+MI+ EP+I ++ Y A+ +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 479 IFNQLLDLGISPDD 492
++ +++ GI PDD
Sbjct: 495 VWEEMIKKGICPDD 508
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A + F+ K++ P +++ Y V L + +++ A +++++M+ +G+KP+++ + ++
Sbjct: 283 AQVLFDKLKERFTP--NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
A++ F M S P+ MI + + +++ A+ +D +
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D ++ LI +G D + +M+ G P+ TYN L+ M K A I
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
Y +M++N P+ T+ ++++Y AR E +V++EM +KG D Y +L
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 399 FGNADEAMKIFADMKSSGDCQP 420
G + EA + +M G P
Sbjct: 521 EGKSREACRYLEEMLDKGMKTP 542
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D SM+ + A+ + +S+ + T K + F+ +K + + + ++
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
MK K + T N LL ++GRAK ++A+ +++++ K F+PN TY LL +CR
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRV 311
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
R +A ++ +M ++G D V +N++ + +A+K+F MKS G C
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC------ 365
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
PN+ + T ++ + K + ++ F+ ++
Sbjct: 366 ------------------------------PNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
Query: 485 DLGISPDDRFCDCLL 499
D G+ PD CL+
Sbjct: 396 DSGLQPDAAVYTCLI 410
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
E A + + Q +KP +V +NV L+ + A KLF M +G PN+ +++
Sbjct: 316 EAARIWNDMIDQGLKP--DIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
++ S A+E+F+ M +PD + +I + +D L + +
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
D ++ALIK+ + +Y+ M +P++ T+N ++ + A+ +
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGR 493
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
++EEM+K G P+ +Y L++ S +A +EM +KG + YN
Sbjct: 494 AVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 147/362 (40%), Gaps = 10/362 (2%)
Query: 102 KKSYAATSSPLEKLAKSLDSCNPTEQQVS---EMLVKGLGENVTEREAMIVLDNMVNPET 158
++ +A S + L E VS EM KGL T AM +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
A+ FE K K K V N L K A+ LFD++ +R PN++T++ L+
Sbjct: 248 AVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 219 ACASTCSVPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
C V + +A + M +PD M+ R A+ L+ K++
Sbjct: 306 N--GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
+ +++ +I+ + + + + + DM G +P+ Y L+ G K+
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+ +EM + G P+ TY AL++ + E A +Y +M + + +NM+
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
N + ++ +M G C PD+ +YT LI GK EA L EM+ G +
Sbjct: 484 FMARNYEMGRAVWEEMIKKGIC-PDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Query: 457 IL 458
++
Sbjct: 543 LI 544
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 140/335 (41%), Gaps = 2/335 (0%)
Query: 156 PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS 215
P A+ F + KQK + V +YN L + E ++ ++L EM + G ++ T++
Sbjct: 169 PHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWT 228
Query: 216 TLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
L++ K + FEKM E D MI G D+AL Y +
Sbjct: 229 ILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEK 288
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
+ L+ S D S+ DM + + LL + + + ++A
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEA 348
Query: 336 KTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDM 395
+ E+ + + L++ CRA DAL + MK + D D +Y ++
Sbjct: 349 LELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISG 407
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
+ +A++ F +K SG P TYT ++ + + + L NEMI G EP
Sbjct: 408 YLRQNDVSKALEQFEVIKKSGR-PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+ +A+T++V + R + K+F+ + + GI P
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 138/371 (37%), Gaps = 72/371 (19%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+++K+ KDF + LF EM ++G LIT T W
Sbjct: 681 YNMSIKVAGCGKDFKQMRSLFYEMRRQGC---LITQDT----------------W----- 716
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY--GMSGN 296
A MI Y R G ++A+ + K + F LI + N
Sbjct: 717 -----------AIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRN 765
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ + +M G P+ + L + +DAK+ + + K GF P Y+
Sbjct: 766 VEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSI 824
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
++A CR E+ALS + + +D+ Y + G+ +A+ MK G
Sbjct: 825 YIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIG 884
Query: 417 ----------------------------------DCQPDNFTYTSLINMYSCMGKVTEAE 442
C+P TYT++I Y +GKV EA
Sbjct: 885 TKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAW 944
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
M G P+ + ++ +A +++D +K+ +++LD GI+P + Y
Sbjct: 945 NAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Query: 503 TQIPRQELGKI 513
+ + +L +I
Sbjct: 1005 NREGKHDLARI 1015
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 104/265 (39%), Gaps = 29/265 (10%)
Query: 178 LYNVTLKLFREIKDFG------------------------RAEKLFDEMLQRGVKPNLIT 213
L N+ ++ F+E+KD G A + F EM++ G P+
Sbjct: 728 LTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDREL 787
Query: 214 FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA--RIGNVDMALSLYDR 271
+ C A + + A IY+ A RIG ++ ALS
Sbjct: 788 VQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVT---VAYSIYIRALCRIGKLEEALSELAS 844
Query: 272 AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKR 331
+ E+ +D + +++ G+ L + MK +G KP + Y +L+ + K+
Sbjct: 845 FEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 904
Query: 332 ARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
++M P+ TY A++ Y E+A + ++ M+E+G D Y+
Sbjct: 905 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 964
Query: 392 LFDMCAHFGNADEAMKIFADMKSSG 416
+ +++A+K+ ++M G
Sbjct: 965 FINCLCQACKSEDALKLLSEMLDKG 989
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 3/265 (1%)
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
KM EPD ++S++ + ++ A+ + + + + D V + LI +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
L V MK G PN+VTY++L+ + ++ R DA+ EM +PN T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN-MLFDMCAHFGNADEAMKIFADMKS 414
AL+ AY + SVYK M + D + Y+ +++ +C H DEA+K+ M S
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH-NRVDEAIKMLDLMIS 181
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRAD 474
G C P+ TY++L N + +V + LL++M + G N ++ +L+ Y +A + D
Sbjct: 182 KG-CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 475 DVVKIFNQLLDLGISPDDRFCDCLL 499
+ +F + G+ P+ R + +L
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVL 265
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 5/293 (1%)
Query: 201 EMLQRGVKPNLITFSTLV--ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYAR 258
+M + G+K +++ + L+ C + VP A+E ++M P+ +S+I +
Sbjct: 38 QMEKMGIKRDVVVDTILIDTLCKNRLVVP--ALEVLKRMKDRGISPNVVTYSSLITGLCK 95
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
G + A ++K + + FSALI Y G SVY M + PN+ T
Sbjct: 96 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT 155
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
Y++L+Y + R +A + + M+ G +PN TY+ L + ++ +D + + +M
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 215
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
++G + V N L G D A+ +F M S+G P+ +Y ++ G+V
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNG-LIPNIRSYNIVLAGLFANGEV 274
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+A + M + + +I+ T ++H KA + +F +L + PD
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 7/301 (2%)
Query: 148 IVLDNMVNPETALLAFEYFKQ----KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEML 203
I++D + + A E K+ I P +VV Y+ + + AE+ EM
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISP--NVVTYSSLITGLCKSGRLADAERRLHEMD 110
Query: 204 QRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVD 263
+ + PN+ITFS L+ + K ++ M +P+ +S+IY VD
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 170
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
A+ + D ++ + V +S L + S D + + DM G N V+ N L+
Sbjct: 171 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
+A + A ++ M NG PN +Y +L E ALS ++ M++ D
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+D + Y ++ EA +F +K +PD YT +I + G TEA+A
Sbjct: 291 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFK-RVEPDFKAYTIMIAELNRAGMRTEADA 349
Query: 444 L 444
L
Sbjct: 350 L 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 8/286 (2%)
Query: 124 PTEQQVSEMLVKGLGENVTEREAMIV----LDNMVNPETALLAFEYFKQKIKPARHVVLY 179
P + + M +G+ NV ++I + + E L E +KI P +V+ +
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL--HEMDSKKINP--NVITF 121
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
+ + + + + + ++ M+Q + PN+ T+S+L+ + +A++ + M S
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
C P+ +++ + + VD + L D +TV+ + LIK Y +G D
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
L V+ M G PN+ +YN +L + A + +E M K + TY ++
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
C+A ++A ++ ++K K + D Y ++ G EA
Sbjct: 302 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG 400
+M+K G P+ T ++L+ +C + +DA+ V +M++ G D V+ +L D
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
A+++ MK G P+ TY+SLI G++ +AE L+EM PN++
Sbjct: 63 LVVPALEVLKRMKDRG-ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
++L+ Y K + V ++ ++ + I P+ L+Y
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIY 161
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 5/318 (1%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+++ K F +K F A F +M G P + + + ++ A+ ++ +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ P+ ++ Y R G +D + L + +R V+++ LI + G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ L + + M G +PN+VT+N L++ RA + ++A ++ EM +PN TY L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN-MLFDMCAHFGNADEAMKIFADMKSSG 416
+ Y + E A Y++M G D + YN ++F +C A F
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ--FVKELDKE 407
Query: 417 DCQPDNFTYTSLINMYSCMGK-VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
+ P++ T+++LI M C+ K L MIR G PN LV + + + D
Sbjct: 408 NLVPNSSTFSALI-MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 476 VVKIFNQLLDLGISPDDR 493
++ +++ I D R
Sbjct: 467 ASQVLREMVRRSIPLDSR 484
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 24/362 (6%)
Query: 160 LLAFEYFK--QKIKPARHVV-LYNVTLKLFREIKDFGRAEKLF-DEMLQRGVKPNLITFS 215
LL+ E+F + P H + + + L + + F AE + D ++ GV F
Sbjct: 96 LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155
Query: 216 TLV----ACASTCSVPHKAVEWFEKMPSFECEPD--------------DNLSASMIYVYA 257
L+ C ST V + F + F D ++ +A M +
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ G VD+AL Y + K + + ++ Y SG D + + DM+ LG + V
Sbjct: 216 Q-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
+YN L+ A + M K+G PN T+ L+ +CRA ++A V+ EM
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
K + V YN L + + G+ + A + + DM +G Q D TY +LI K
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG-IQRDILTYNALIFGLCKQAK 393
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
+A + E+ + PN ++L+ K AD +++ ++ G P+++ +
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 498 LL 499
L+
Sbjct: 454 LV 455
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 1/252 (0%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
+L +M + G + ++++TL+A + A++ M +P+ ++I+ +
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
R + A ++ K +TV ++ LI Y G+++ Y DM G + ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
+TYN L++ + + + R A +E+ K PN T++AL+ C + ++ +YK
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M G ++ +NML + D A ++ +M D+ T + N G
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR-SIPLDSRTVHQVCNGLKHQG 497
Query: 437 KVTEAEALLNEM 448
K + LL EM
Sbjct: 498 KDQLVKKLLQEM 509
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V YN + E A KL + M + G++PN++TF+TL+ +A + F +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M + P+ ++I Y++ G+ +MA Y+ + D + ++ALI
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
++ PN T++ L+ K A +Y+ M+++G PN T+
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ A+CR + A V +EM + +D + + + H G K+ +M+
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 5/318 (1%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+++ K F +K F A F +M G P + + + ++ A+ ++ +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ P+ ++ Y R G +D + L + +R V+++ LI + G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ L + + M G +PN+VT+N L++ RA + ++A ++ EM +PN TY L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN-MLFDMCAHFGNADEAMKIFADMKSSG 416
+ Y + E A Y++M G D + YN ++F +C A F
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ--FVKELDKE 407
Query: 417 DCQPDNFTYTSLINMYSCMGK-VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
+ P++ T+++LI M C+ K L MIR G PN LV + + + D
Sbjct: 408 NLVPNSSTFSALI-MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 476 VVKIFNQLLDLGISPDDR 493
++ +++ I D R
Sbjct: 467 ASQVLREMVRRSIPLDSR 484
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 24/362 (6%)
Query: 160 LLAFEYFK--QKIKPARHVV-LYNVTLKLFREIKDFGRAEKLF-DEMLQRGVKPNLITFS 215
LL+ E+F + P H + + + L + + F AE + D ++ GV F
Sbjct: 96 LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155
Query: 216 TLV----ACASTCSVPHKAVEWFEKMPSFECEPD--------------DNLSASMIYVYA 257
L+ C ST V + F + F D ++ +A M +
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ G VD+AL Y + K + + ++ Y SG D + + DM+ LG + V
Sbjct: 216 Q-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
+YN L+ A + M K+G PN T+ L+ +CRA ++A V+ EM
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
K + V YN L + + G+ + A + + DM +G Q D TY +LI K
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG-IQRDILTYNALIFGLCKQAK 393
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
+A + E+ + PN ++L+ K AD +++ ++ G P+++ +
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 498 LL 499
L+
Sbjct: 454 LV 455
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 1/252 (0%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
+L +M + G + ++++TL+A + A++ M +P+ ++I+ +
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
R + A ++ K +TV ++ LI Y G+++ Y DM G + ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
+TYN L++ + + + R A +E+ K PN T++AL+ C + ++ +YK
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M G ++ +NML + D A ++ +M D+ T + N G
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR-SIPLDSRTVHQVCNGLKHQG 497
Query: 437 KVTEAEALLNEM 448
K + LL EM
Sbjct: 498 KDQLVKKLLQEM 509
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V YN + E A KL + M + G++PN++TF+TL+ +A + F +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M + P+ ++I Y++ G+ +MA Y+ + D + ++ALI
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
++ PN T++ L+ K A +Y+ M+++G PN T+
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ A+CR + A V +EM + +D + + + H G K+ +M+
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 2/241 (0%)
Query: 196 EKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYV 255
E++ +M Q G+ P+++T + LV S +A E FE + S+ PD+ + +MI
Sbjct: 404 ERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILG 463
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP- 314
Y G + L + ++ + + AL++ Y G+ + + S M+ P
Sbjct: 464 YVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPL 523
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ Y+ + A G+A + AK+ ++EM K G P+ A L++AY + AL +
Sbjct: 524 SFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLL 583
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
++++ G ++ + Y +L D A+ G +EA ++ + G+ P SL MYS
Sbjct: 584 LQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQ-VSLCCMYSG 642
Query: 435 M 435
+
Sbjct: 643 V 643
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 134/311 (43%), Gaps = 13/311 (4%)
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
+ +I+++A+ +++ + + D + +AL+ MY SGN++ + ++K
Sbjct: 388 SKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKS 447
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G +P+ Y ++ A + + + + +EM + Y ALL+AY + +
Sbjct: 448 YGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANG 507
Query: 370 ALSVYKEMKEKGKD-VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A + M+ + Y++ + G D+A F +M+ G +PD+ +L
Sbjct: 508 AAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGH-KPDDKCIANL 566
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
+ Y + +A LL ++ + G E ++ T LV ++ ++ ++ LG
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGE 626
Query: 489 SP--DDRFCDCLLYVATQIPR---QELGKITACIEKAKP-KLGSVVRYLTEEHEGDGDFR 542
+P + + C +Y + + Q LG + A ++ P + V+ L G F
Sbjct: 627 APPFELQVSLCCMYSGVRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKR-----GGFE 681
Query: 543 KEALELFNSID 553
K+A ++ ++
Sbjct: 682 KDARRMYKYME 692
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 1/232 (0%)
Query: 258 RIGNVDMALSLYDRAKTEK-WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
R GN L + + EK + +S LI ++ + + + M G P++
Sbjct: 360 REGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDI 419
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
+T L++ ++ A +E + G P+ Y A++ Y A + + KE
Sbjct: 420 LTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKE 479
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M+ K + +Y L A G+A+ A I + M+ + D Y+ + Y G
Sbjct: 480 MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAG 539
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
+V +A++ +EM + G +P+ + +LV Y D +++ QL GI
Sbjct: 540 QVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGI 591
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 11/220 (5%)
Query: 278 RVDTVAFSALIKMYGMSGNYDACLSVYS---DMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
RVD +A ++ GN A L V D K A ++ Y+ L++ + D
Sbjct: 349 RVDWIALINQLR----EGNTHAYLKVAEGVLDEKSFNA--SISDYSKLIHIHAKENHIED 402
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
+ I ++M +NG P+ T AL+ Y ++ E A ++ +K G D+ +Y +
Sbjct: 403 VERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMIL 462
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
+ G ++ +M++ + + Y +L+ Y+ MG A + + M
Sbjct: 463 GYVNAGKPKLGERLMKEMQAK-ELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDG 521
Query: 455 P-NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
P + A + V YGKA + D F+++ LG PDD+
Sbjct: 522 PLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDK 561
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
Y+ LI++++ + + E +L +M + G P+IL T+LVH+Y K+ + + F L
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 485 DLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLG 525
G+ PD++ + ++ LG + A KPKLG
Sbjct: 447 SYGLRPDEKIYEAMI----------LGYVNA----GKPKLG 473
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 37/309 (11%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V ++N+ L + + +AEKL++EM VKP ++T+ TL+
Sbjct: 250 VRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG--------------- 294
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
Y R+ V +A+ + + K + ++ + F+ +I G +G
Sbjct: 295 --------------------YCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
L + V + P +VTYN+L+ +A A I + M+ G P TY
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+ + + +E+ +++Y ++ E G D++ Y+++ M G AM++ +MK+
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD T T LI++ + + EA + +R G P + ++ ++K D
Sbjct: 455 G-IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF-KMIDNGLRSKGMSD 512
Query: 476 VVKIFNQLL 484
+ K + L+
Sbjct: 513 MAKRLSSLM 521
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 1/235 (0%)
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
+ R + A L++ K + V + LI+ Y + V +MK+ + N
Sbjct: 260 WFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN 319
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+ +N ++ +G A R +A + E P TY +L++ +C+A A + K
Sbjct: 320 FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILK 379
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM 435
M +G D YN F + +E M ++ + +G PD TY ++ M
Sbjct: 380 MMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH-SPDRLTYHLILKMLCED 438
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
GK++ A + EM G +P++L T L+HL + + ++ + F+ + GI P
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 143/336 (42%), Gaps = 53/336 (15%)
Query: 204 QRGVKPNL-ITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNV 262
+ G++P++ + + +S+ + H +W E P F P +L S++ +
Sbjct: 94 ETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSP--SLFDSVVNSLCKAREF 151
Query: 263 DMALSL-YDRAKTEKWR--VDTVAFSALIKMYGMSG-------------NYDACLSVYSD 306
++A SL +DR ++++ V F LI+ Y +G +Y+ ++
Sbjct: 152 EIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATE 211
Query: 307 MKVLGA-----------------------------KPNMVTYNNLLYAMGRAKRARDAKT 337
+++L P++ +N LL R+++ + A+
Sbjct: 212 LRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEK 271
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
++EEM P TY L++ YCR R + A+ V +EMK +++ +++N + D
Sbjct: 272 LWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLG 331
Query: 398 HFGNADEAMKIFADMKSSGDCQ--PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
G EA+ + M+ C+ P TY SL+ + G + A +L M+ G +P
Sbjct: 332 EAGRLSEALGM---MERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ K + ++ + ++ +L++ G SPD
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 148/340 (43%), Gaps = 34/340 (10%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNL--ITFSTLVACASTCSVPHK 229
P R V +NV ++ + G A K ++ M+ R NL +T T++ +S+
Sbjct: 99 PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLY----DRAKT----------- 274
+ ++ E + + ++Y+YA +G + A ++ DR
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 275 -----------EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
D+V+++A+IK +G + + +MKV G K + + ++L
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
A G + K I+ +++ F + +AL+ YC+ +C A +V+ MK+K
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK--- 334
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+ V + + G A+EA+KIF DM+ SG PD++T I+ + + + E
Sbjct: 335 -NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+ I G + SLV LYGK DD ++FN++
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 151/347 (43%), Gaps = 40/347 (11%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P LYN + + +K A ++FD + Q PNL +++ L+ S + +
Sbjct: 37 PYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEME 92
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE-KWRVDTVAFSALIKM 290
FEK+P + D +I Y+ G V A+ Y+ + + V ++K+
Sbjct: 93 STFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKL 148
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY----------- 339
+G+ ++ + LG + ++ + LLY DAK ++
Sbjct: 149 SSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 340 -------------EEMVK--NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
E+ ++ G + ++AA+++ + +++A+ ++EMK +G +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
D+ + + C G +E +I A + + + Q + ++LI+MY + A+ +
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ M + N+++ T++V YG+ RA++ VKIF + GI PD
Sbjct: 328 FDRMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 143/323 (44%), Gaps = 9/323 (2%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+A+ L EM + G PN ++++TL+ + + KA+ F M + P+ ++
Sbjct: 174 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIV 233
Query: 254 YVYAR---IGNVDMAL--SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
+ + IGN + L + D ++ +D V + L+ +GN L V+ +M
Sbjct: 234 HALCQKGVIGNNNKKLLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
+ V YN ++ + + A +MVK G +P+ TY L+ A C+ +
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFD-MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+A ++ M+ G D++ Y ++ +C H G+ + A + F P+ +
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIH-GDVNRANE-FLLSMLKSSLLPEVLLWNV 410
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+I+ Y G + A ++LN M+ G +PN+ +L+H Y K R D + N++
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 488 ISPDDRFCDCLLYVATQIPRQEL 510
I PD + LL A + L
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRL 493
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 135/340 (39%), Gaps = 40/340 (11%)
Query: 148 IVLDNMVNPETALLAFEYFK---QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
I++D+ + A E +K QK PA VV YNV ++ + A +M++
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV-YNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 205 RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
RGV P++ T++TL++ +A + M + PD +I G+V+
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A + + ++ +I YG G+ + LSV + M G KPN+ T N L++
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
+ R DA + EM P+ TY LL A C A +Y EM +G
Sbjct: 449 GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG--- 505
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
CQPD TYT L+ G++ +AE+L
Sbjct: 506 ---------------------------------CQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
L+ + G + + L Y + +R + ++ + L
Sbjct: 533 LSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 154/365 (42%), Gaps = 44/365 (12%)
Query: 168 QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSV 226
+++ P+ + V YN +K + + +A LF+ M + G++PN +T + +V A +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 227 PHKAVEWFEKM--PSFECEPDDNLSASMIYVYA-RIGNVDMALSLYDRAKTEKWRVDTVA 283
+ + E++ S P D + +++ + GNV AL ++ + D+V
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++ +I+ SGN A DM G P++ TYN L+ A+ + + +A ++ M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
G +P+ +Y ++Q C A M + + +L+N++ D +G+
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 404 EAMKIFADMKSSG----------------------------------DCQPDNFTYTSLI 429
A+ + M S G PD TY L+
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH---LYGKAKRADDVVKIFNQLLDL 486
+G + A L +EM+R G +P+I+ T LV G+ K+A+ + +++
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE---SLLSRIQAT 539
Query: 487 GISPD 491
GI+ D
Sbjct: 540 GITID 544
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
S++++ + G DA L + M G P ++T+N+LL + +A A + EM +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG----------------------- 381
G SPN +Y L++ C + AL ++ M + G
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 382 ----------------KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY 425
+D V+ +L D C GN +A++++ +M S + D+ Y
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM-SQKNVPADSVVY 303
Query: 426 TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+I G + A + +M++ G P++ +L+ K + D+ + + +
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 486 LGISPD 491
G++PD
Sbjct: 364 GGVAPD 369
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+L+NV + + D A + + ML GVKPN+ T
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYT---------------------- 442
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ ++I+ Y + G + A + + ++ K DT ++ L+ G
Sbjct: 443 -------------NNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ +Y +M G +P+++TY L+ + R + A+++ + G + + +
Sbjct: 490 HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFL 549
Query: 356 ALLQAYCRARCSEDALSVYKE---MKEKGKDVDKVLYNM 391
L + Y R + +A VYK+ + +G +L +M
Sbjct: 550 ILAKKYTRLQRPGEAYLVYKKWLATRNRGVSCPSILNHM 588
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 143/303 (47%), Gaps = 8/303 (2%)
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
H E E+ + + +A +I +Y + G + A +++ + ++F+AL
Sbjct: 91 HYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNAL 150
Query: 288 IKMYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+ Y +S +D +++++ L KP++V+YN L+ A+ +A + +E+ G
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 347 FSPNWPTY-AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
P+ T+ LL +Y + + E ++ +M EK +D YN A+ + E
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQF-ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKEL 269
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
+ +F ++K+SG +PD F++ ++I GK+ EAEA E+++ G+ P+ L+
Sbjct: 270 VNLFGELKASG-LKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLP 328
Query: 466 LYGKAKRADDVVKIFNQLLD----LGISPDDRFCDCLLYVATQIPRQELGKITACIEKAK 521
KA + +++F + +G + + D L+ + + +E+ KI + K
Sbjct: 329 AMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLK 388
Query: 522 PKL 524
KL
Sbjct: 389 LKL 391
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQR-GVKPNLITFSTLV-ACASTCSVPHKAV 231
R V+ +N L +R K F E+LF+E+ + +KP++++++TL+ A S+P AV
Sbjct: 142 RSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPE-AV 200
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+++ + +PD +++ G ++ ++ + + +D ++A +
Sbjct: 201 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGL 260
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
++++ ++K G KP++ ++N ++ + +A+ Y+E+VK+G+ P+
Sbjct: 261 ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 320
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
T+A LL A C+A E A+ ++KE K V + L D +EA +I
Sbjct: 321 ATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 380
Query: 412 MKSS 415
K++
Sbjct: 381 AKTN 384
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 11/320 (3%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAST 223
E F+ I V V K +++ +K + +M + G +I+
Sbjct: 68 ERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLY------GK 121
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE-KWRVDTV 282
+ A + FE+MP+ +C+ +++ Y D+ L++ + + D V
Sbjct: 122 AGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIV 181
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
+++ LIK + +++ +++ G KP++VT+N LL + + + I+ +M
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
V+ + + TY A L S++ ++++ E+K G D +N + + G
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
DEA + ++ G +PD T+ L+ G A L E + L
Sbjct: 302 DEAEAWYKEIVKHG-YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQ 360
Query: 463 LV-HLYGKAKR--ADDVVKI 479
LV L +KR A+++VKI
Sbjct: 361 LVDELVKGSKREEAEEIVKI 380
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 2/294 (0%)
Query: 201 EMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIG 260
EM ++G++ N I ++TL+ + + + F +M +P ++ YAR
Sbjct: 369 EMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRM 428
Query: 261 NVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY-DACLSVYSDMKVLGAKPNMVTY 319
D+ +L + + +++ LI YG + D + MK +G KP+ +Y
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSY 488
Query: 320 NNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
L++A + A +EEM K G P+ TY ++L A+ R+ + + ++K M
Sbjct: 489 TALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVT 439
+ ++ YN L D A G EA + ++ G QP TY L+N Y+ G+
Sbjct: 549 EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG-LQPSVMTYNMLMNAYARGGQDA 607
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+ LL EM +P+ + +++++ + + + ++ G PD R
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPR 661
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 148/326 (45%), Gaps = 6/326 (1%)
Query: 185 LFREIKDFGRAEK----LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
L ++ GR+ K +F++M ++GVK + F LV + +A+ +M
Sbjct: 314 LITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK 373
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
+ + +++ Y + +++ L+ + + + ++ L+ Y D
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD-AKTIYEEMVKNGFSPNWPTYAALLQ 359
++ +M+ LG +PN+ +Y L+ A GR K+ D A + M K G P+ +Y AL+
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
AY + E A + ++EM ++G Y + D G+ + M+I+ M +
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE-KIK 552
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
TY +L++ ++ G EA +++E + G +P+++ L++ Y + + + ++
Sbjct: 553 GTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQL 612
Query: 480 FNQLLDLGISPDDRFCDCLLYVATQI 505
++ L + PD ++Y ++
Sbjct: 613 LKEMAALNLKPDSITYSTMIYAFVRV 638
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 136/307 (44%), Gaps = 4/307 (1%)
Query: 151 DNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPN 210
D + E ++ E K+ I+ + ++YN + + + E LF EM +G+KP+
Sbjct: 356 DEGLKEEALVIQTEMEKKGIRS--NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPS 413
Query: 211 LITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNV-DMALSLY 269
T++ L+ + P +M EP+ +I Y R + DMA +
Sbjct: 414 AATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAF 473
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRA 329
R K + + +++ALI Y +SG ++ + + +M G KP++ TY ++L A R+
Sbjct: 474 LRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRS 533
Query: 330 KRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY 389
I++ M++ TY LL + + +A V E + G + Y
Sbjct: 534 GDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTY 593
Query: 390 NMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI 449
NML + A G + ++ +M ++ + +PD+ TY+++I + + A M+
Sbjct: 594 NMLMNAYARGGQDAKLPQLLKEM-AALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 450 RCGFEPN 456
+ G P+
Sbjct: 653 KSGQVPD 659
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 7/211 (3%)
Query: 189 IKDFGRAEKLFD-------EMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFE 241
I +GR +K+ D M + G+KP+ +++ L+ S KA FE+M
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
+P S++ + R G+ + ++ EK + + ++ L+ + G Y
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
V S+ +G +P+++TYN L+ A R + + +EM P+ TY+ ++ A+
Sbjct: 576 DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
R R + A +K M + G+ D Y L
Sbjct: 636 VRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
A S L + G D L + S++ ++ YN + + ++R DA +YE M
Sbjct: 240 ACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM 299
Query: 343 VKNGFSPNWPTYAALLQAYCRA-RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
K P+ T A L+ +A R +++ ++++M EKG + ++ L G
Sbjct: 300 DKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
+EA+ I +M+ G + + Y +L++ Y+ + E E L EM G +P+
Sbjct: 360 KEEALVIQTEMEKKG-IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 462 SLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
L+ Y + + D V + ++ DLG+ P+ + CL+
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI 456
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 14/299 (4%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
E L M R VKP+ TF+ L P KA++ E+M +P++ + I
Sbjct: 253 GEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAID 311
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDT---VAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
+ + G VD A L+D T+ V F+ +I + + C + M G
Sbjct: 312 TFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG 371
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
P++ TY +++ M A++ +A +EM G+ P+ TY L+ C R +++AL
Sbjct: 372 CLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEAL 431
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN- 430
+Y M E YNML M + D A + +M DC D TY ++IN
Sbjct: 432 KLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR-DCVQDVETYCAMING 490
Query: 431 MYSCMGKVTEAEALLNEMIRCG-------FEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
++ C + EA LL E++ G F+ ++ L+ + +L K ++ + K +N
Sbjct: 491 LFDC-HRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNH 548
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
KP+ T+N L + R + + A + EEM++ G P TY A + +C+A ++A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 372 SVYKEMKEKGKDVDK---VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
++ M KG V + ++ A A+E ++ M S+G C PD TY +
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTYKDV 382
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I KV EA L+EM G+ P+I+ + + + ++ D+ +K++ ++++
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 489 SP 490
+P
Sbjct: 443 AP 444
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
+ +P + +N LL A+ + ++ + + M ++ P+ T+ L +CR R +
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM--KSSGDCQPDNFTYTS 427
A+ + +EM E G + Y D G DEA +F M K S P T+
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+I + K E L+ MI G P++ ++ A++ D+ K +++ + G
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 488 ISPDDRFCDCLLYV 501
PD +C L V
Sbjct: 407 YPPDIVTYNCFLRV 420
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 145/349 (41%), Gaps = 21/349 (6%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA-CASTCSVPHKAV- 231
R V+ + + + E D A +L M GV+PN +T ++LV+ C V
Sbjct: 282 RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 232 -EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
W + + D + S+I +YA+ VD+ ++ A + T +SA+I
Sbjct: 342 HGWAVRQQVY---SDIIIETSLISMYAKCKRVDLCFRVFSGAS----KYHTGPWSAIIAG 394
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ L ++ M+ +PN+ T N+LL A R A I+ + K GF +
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
L+ Y + E A ++ ++EK K D VL+ L G+ A+++F
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFM 514
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA----LTSLVHL 466
+M SG P+ T+TS +N S G V E L M+ LA T +V L
Sbjct: 515 EMVRSG-VTPNEITFTSALNACSHSGLVEEGLTLFRFMLE---HYKTLARSNHYTCIVDL 570
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
G+A R D+ +N + + P LL +LG++ A
Sbjct: 571 LGRAGRLDEA---YNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAA 616
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 26/335 (7%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-STLVACASTCSVP----- 227
R V+ +N + + A +FD M+ V + T S L C +
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
HK VE EK + E + +++ +Y + G +D A ++DR + R D + ++ +
Sbjct: 241 HKLVE--EKRLGDKIEVKN----ALVNMYLKCGRMDEARFVFDRME----RRDVITWTCM 290
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I Y G+ + L + M+ G +PN VT +L+ G A + D K ++ V+
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
+ +L+ Y + + + V+ + ++ + C +A+
Sbjct: 351 YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVSDALG 406
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+F M+ D +P+ T SL+ Y+ + + +A + + + GF ++ A T LVH+Y
Sbjct: 407 LFKRMRRE-DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 468 GKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
K + KIFN GI + D +L+ A
Sbjct: 466 SKCGTLESAHKIFN-----GIQEKHKSKDVVLWGA 495
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 136/320 (42%), Gaps = 27/320 (8%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK--PNLITFSTLVACASTCS---- 225
P ++ YN+ ++++ + A +F M+ GVK P+ T+ + A
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 226 --VPHKAV--EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
V H + WF + D + +++ +Y G V+MA ++D K D
Sbjct: 136 GLVVHGRILRSWFGR--------DKYVQNALLAMYMNFGKVEMARDVFDVMKNR----DV 183
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
++++ +I Y +G + L ++ M + T ++L G K + +++
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGN 401
+ + AL+ Y + ++A V+ M+ + D + + + + G+
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGD 299
Query: 402 ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT 461
+ A+++ M+ G +P+ T SL+++ KV + + L +R +I+ T
Sbjct: 300 VENALELCRLMQFEG-VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 462 SLVHLYGKAKRADDVVKIFN 481
SL+ +Y K KR D ++F+
Sbjct: 359 SLISMYAKCKRVDLCFRVFS 378
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 140/293 (47%), Gaps = 13/293 (4%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R +V +N + +++I + +A ++ M GVKP+ +T LV+ S ++
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
E++E + L +++ ++++ G++ A ++D + V+++ +I Y
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT----IVSWTTMISGY 333
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G D ++ DM+ + ++V +N ++ +AKR +DA +++EM + P+
Sbjct: 334 ARCGLLDVSRKLFDDME----EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDE 389
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
T L A + + + +++ +++ ++ L L DM A GN EA+ +F
Sbjct: 390 ITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
+++ ++ TYT++I + G + A + NEMI G P+ + L+
Sbjct: 450 IQTR-----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 150/328 (45%), Gaps = 21/328 (6%)
Query: 166 FKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCS 225
K +++ HV +N ++ +F D A K+FDE R +L++++ L+
Sbjct: 183 LKLRLELVSHV--HNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLINGYKKIG 236
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
KA+ ++ M S +PDD ++ + +G+++ Y+ K R+ +
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
AL+ M+ G+ ++ +++ K +V++ ++ R ++ ++++M +
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
+ + A++ +A+ +DAL++++EM+ D++ C+ G D
Sbjct: 353 ----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP-NILALTSLV 464
+ I ++ + TSL++MY+ G ++EA ++ + G + N L T+++
Sbjct: 409 IWIHRYIEKY-SLSLNVALGTSLVDMYAKCGNISEALSVFH-----GIQTRNSLTYTAII 462
Query: 465 HLYGKAKRADDVVKIFNQLLDLGISPDD 492
A + FN+++D GI+PD+
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDE 490
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 156/379 (41%), Gaps = 54/379 (14%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGV---KPNLITFSTLVACASTCSVPHKAVEWFE 235
+NVT++ F E ++ + L+ +ML+ G +P+ T+ L + +
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ E ++ + I+++A G+++ A ++D + D V+++ LI Y G
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLINGYKKIG 236
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + VY M+ G KP+ VT L+ + K YE + +NG P
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP--- 293
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
L N L DM + G+ EA +IF +++
Sbjct: 294 --------------------------------LVNALMDMFSKCGDIHEARRIFDNLE-- 319
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
+ ++T++I+ Y+ G + + L ++M E +++ +++ +AKR D
Sbjct: 320 ---KRTIVSWTTMISGYARCGLLDVSRKLFDDM----EEKDVVLWNAMIGGSVQAKRGQD 372
Query: 476 VVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK-ITACIEKAKPKLG-SVVRYLTE 533
+ +F ++ PD+ L +Q+ ++G I IEK L ++ L +
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 534 EHEGDGDFRKEALELFNSI 552
+ G+ EAL +F+ I
Sbjct: 433 MYAKCGNI-SEALSVFHGI 450
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 120/286 (41%), Gaps = 13/286 (4%)
Query: 163 FEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
+EY K+ + L N + +F + D A ++FD + +R +++++T+++ +
Sbjct: 280 YEYVKEN-GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYA 334
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTV 282
C + + + F+ M E D L +MI + AL+L+ +T + D +
Sbjct: 335 RCGLLDVSRKLFDDME----EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
+ G D + ++ ++ N+ +L+ + +A +++ +
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
+ N TY A++ + A+S + EM + G D++ + L C H G
Sbjct: 451 Q----TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
F+ MKS + P Y+ ++++ G + EA+ L+ M
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 151/314 (48%), Gaps = 20/314 (6%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWF 234
+V++N + + + LF E+L+ G+ P+ TF +L+ ACA KA+E
Sbjct: 94 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA-----KALEEG 148
Query: 235 EKMP--SFECEPDDNLSA--SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
++ S + DDN+ ++I +Y +VD A ++DR V ++A+I
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC----VVCYNAMITG 204
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
Y + LS++ +M+ KPN +T ++L + K I++ K+ F
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
AL+ + + +DA+S++++M+ K D ++ + A+ G A+++M +F
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILALTSLVHLYGK 469
M+S + QPD T+ L+N S G+V E ++M+ + G P+I S+V L +
Sbjct: 321 RMRSE-NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 470 AKRADDVVKIFNQL 483
A +D + ++L
Sbjct: 380 AGNLEDAYEFIDKL 393
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 153/347 (44%), Gaps = 23/347 (6%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVE 232
R V + V + F + ++F A LF+EM+ G PN TFS++V +CA + +
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG-R 145
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+ E + + +S+ +Y++ G A L+ + DT++++ +I
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN----ADTISWTMMISSLV 201
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
+ + L YS+M G PN T+ LL A KTI+ ++ G N
Sbjct: 202 GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV 260
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
+L+ Y + EDA+ V E+ D L+ + A EA+ F +M
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
+S G QP+NFTY++++++ S + + + + ++ I+ GFE + +LV +Y K
Sbjct: 317 RSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 473 AD-DVVKIFNQL----------LDLGISPDDRFCDCLLYVATQIPRQ 508
++ + ++F + L LG+ DC + + R+
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 142/310 (45%), Gaps = 14/310 (4%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
L N L L+ + A KLFDEM R V ++ +++ + A+ FE+M
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTV----FAWTVMISAFTKSQEFASALSLFEEM 115
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
+ P++ +S++ A + ++ ++ + ++V S+L +Y G +
Sbjct: 116 MASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQF 175
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
++S ++ + +++ ++ ++ A++ R+A Y EMVK G PN T+ L
Sbjct: 176 KEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKL 231
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
L A E +++ + +G ++ VL L D + F ++A+++ + SSG
Sbjct: 232 LGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV---LNSSG- 286
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
+ D F +TS+++ + + EA EM G +PN ++++ L + D
Sbjct: 287 -EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 478 KIFNQLLDLG 487
+I +Q + +G
Sbjct: 346 QIHSQTIKVG 355
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 47/292 (16%)
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+AV F +M S +P++ ++++ + + + ++D ++ + + T +AL+
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALV 367
Query: 289 KMYGMSGNYDACLSVYSDMKVLGA--KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
MY S +V GA PN+V++ L+ + +D + EMVK
Sbjct: 368 DMY-----MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
PN T + +L+A + R L ++ + + D + V+ N L D A D A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM------------------ 448
+ MK + DN TYTSL+ ++ +GK A +++N M
Sbjct: 483 NVIRSMK-----RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Query: 449 -----------------IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
++ GF L SLV +Y K +D K+F ++
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 160/374 (42%), Gaps = 27/374 (7%)
Query: 99 QLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIV--LDNMVNP 156
Q +K + ++ L C+ +E + S + + NV +I+ +D+
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ L E K++++P +VV + L+ +++ R ++ +L+R V ++ ++
Sbjct: 410 DCFGLLMEMVKREVEP--NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLS-ASMIYVYARIGNVDMALSLYDRAKTE 275
LV ++ A M + DN++ S++ + +G +MALS+ + +
Sbjct: 468 LVDAYASSRKVDYAWNVIRSM-----KRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 276 KWRVDTVAFSALIKMYG-----MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAK 330
R+D ++ I +G + C SV S GA + N+L+ +
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS--GAASVL---NSLVDMYSKCG 577
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYN 390
DAK ++EE+ +P+ ++ L+ ALS ++EM+ K + D V +
Sbjct: 578 SLEDAKKVFEEIA----TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFL 633
Query: 391 MLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
+L C++ D ++ F MK + +P Y L+ + G++ EA ++ M
Sbjct: 634 ILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM-- 691
Query: 451 CGFEPNILALTSLV 464
+PN + +L+
Sbjct: 692 -HLKPNAMIFKTLL 704
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 37/262 (14%)
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
++ FE M S+ + +V A+ NV AL +Y E +++ ++++
Sbjct: 118 IQLFEWMQQHGKISVSTYSSCIKFVGAK--NVSKALEIYQSIPDESTKINVYICNSILSC 175
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+G D+C+ ++ MK G KP++VTYN LL + VKNG+
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK--------------VKNGYP-- 219
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
A+ + E+ G +D V+Y + +CA G ++EA
Sbjct: 220 ------------------KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
MK G P+ + Y+SL+N YS G +A+ L+ EM G PN + +T+L+ +Y K
Sbjct: 262 QMKVEGH-SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 471 KRADDVVKIFNQLLDLGISPDD 492
D ++ ++L G + ++
Sbjct: 321 GLFDRSRELLSELESAGYAENE 342
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 144/326 (44%), Gaps = 16/326 (4%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVA-CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYV 255
KLFD+M + G+KP+++T++TL+A C + KA+E ++P + D + +++ +
Sbjct: 187 KLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAI 246
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
A G + A + + K E + +S+L+ Y G+Y + ++MK +G PN
Sbjct: 247 CASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPN 306
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
V LL + ++ + E+ G++ N Y L+ +A E+A S++
Sbjct: 307 KVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM 435
+MK KG D +++ EA ++ D +++ + + D +++ Y
Sbjct: 367 DMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE-KCDLVMLNTMLCAYCRA 425
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL---GISPDD 492
G++ ++ +M P+ L+ + K K + + LD+ G ++
Sbjct: 426 GEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLH---LLAYQTTLDMHSKGHRLEE 482
Query: 493 RFCDCLLYVATQIPRQELGKITACIE 518
C L+Y LGKI A E
Sbjct: 483 ELCSSLIY--------HLGKIRAQAE 500
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 189/425 (44%), Gaps = 13/425 (3%)
Query: 69 LDAKLDNPDAKSPPSSKSRIWVN-PRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQ 127
L ++ P A + S+ + N +PR+K+ SY A S + ++ +S D + ++
Sbjct: 33 LSLRILTPTAATTSSAVIELPANVAEAPRSKRH-SNSYLARKSAISEVQRSSDFLSSLQR 91
Query: 128 QVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFR 187
+ + V+ L NV R+ I + + FE+ +Q K + V Y+ +K F
Sbjct: 92 LATVLKVQDL--NVILRDFGIS----GRWQDLIQLFEWMQQHGKIS--VSTYSSCIK-FV 142
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN 247
K+ +A +++ + K N+ +++++C ++ F++M +PD
Sbjct: 143 GAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVV 202
Query: 248 LSASMIYVYARIGN-VDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
+++ ++ N A+ L ++D+V + ++ + +G + +
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQ 262
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
MKV G PN+ Y++LL + + A + EM G PN LL+ Y +
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
+ + + E++ G +++ Y ML D + G +EA IF DMK G + D + +
Sbjct: 323 FDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG-VRSDGYANS 381
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+I+ + EA+ L + + +++ L +++ Y +A + V+++ ++ +
Sbjct: 382 IMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Query: 487 GISPD 491
+SPD
Sbjct: 442 AVSPD 446
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
+ +++ +G+SG + + ++ M+ G K ++ TY++ + +G AK A IY+ +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSIP 158
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA- 402
N ++L + + + ++ +MK G D V YN L C N
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY 218
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
+A+++ ++ +G Q D+ Y +++ + + G+ EAE + +M G PNI +S
Sbjct: 219 PKAIELIGELPHNG-IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 463 LVHLY---GKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYV 501
L++ Y G K+AD+ + ++ +G+ P+ LL V
Sbjct: 278 LLNSYSWKGDYKKADE---LMTEMKSIGLVPNKVMMTTLLKV 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 10/245 (4%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V+Y L + AE +M G PN+ +S+L+ S KA E +
Sbjct: 238 VMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTE 297
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M S P+ + +++ VY + G D + L ++ + + + + L+ +G
Sbjct: 298 MKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGK 357
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ S++ DMK G + + + ++ A+ R+KR ++AK + + +
Sbjct: 358 LEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNT 417
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA-----D 411
+L AYCRA E + + K+M E+ D YN + +F E + + A D
Sbjct: 418 MLCAYCRAGEMESVMRMMKKMDEQAVSPD---YNTFHILIKYF--IKEKLHLLAYQTTLD 472
Query: 412 MKSSG 416
M S G
Sbjct: 473 MHSKG 477
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 3/255 (1%)
Query: 164 EYFKQKIKPARH---VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
E F Q++K H + Y+ L + D+ +A++L EM G+ PN + +TL+
Sbjct: 257 ENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKV 316
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD 280
+ ++ E ++ S ++ ++ ++ G ++ A S++D K + R D
Sbjct: 317 YIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
A S +I S + + D + K ++V N +L A RA + +
Sbjct: 377 GYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG 400
+M + SP++ T+ L++ + + + A +M KG +++ L + L
Sbjct: 437 KMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIR 496
Query: 401 NADEAMKIFADMKSS 415
EA ++ ++ S
Sbjct: 497 AQAEAFSVYNMLRYS 511
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 140/315 (44%), Gaps = 7/315 (2%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE----WFEKMPSFE-CEPDDNLSASM 252
LF EM G +P+ ++ L+ KA+E + +KM E C+P+ +
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ +A+ G VD +L+ D F+ ++ YG +G +V + M+
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
KP+++T+N L+ + G+ + + ++ ++++ P PT+ +++ Y +AR + A
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
V+K+M + + Y + M + G+ A +IF ++ S D T +++ +Y
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGES-DRVLKASTLNAMLEVY 393
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
G EA+ L + P+ L Y KA + V + ++ GI P+
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK 453
Query: 493 R-FCDCLLYVATQIP 506
R F + L +++P
Sbjct: 454 RFFLEALEVFGSRLP 468
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 11/242 (4%)
Query: 266 LSLYDRAKTEKWRV-DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL-- 322
L ++ + ++W + D +S LI + G G + ++S+MK G +P+ YN L
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 323 --LYAMGRAKRARDAKTIYEEMVKNGF---SPNWPTYAALLQAYCRARCSEDALSVYKEM 377
L+ +AK + ++M G PN TY LL+A+ ++ + +++K++
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL 234
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
D +N + D G E + M+S+ +C+PD T+ LI+ Y +
Sbjct: 235 DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLIDSYGKKQE 293
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
+ E ++R +P + S++ YGKA+ D +F ++ D+ P +C
Sbjct: 294 FEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYEC 353
Query: 498 LL 499
++
Sbjct: 354 MI 355
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW-F 234
++ +NV + + + ++F + E+ F +++ KP L TF++++ + KA EW F
Sbjct: 278 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA-EWVF 336
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+KM P MI +Y G+V A +++ + +A++++Y +
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G Y ++ + P+ TY L A +A + + ++M K+G PN +
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Query: 355 AALLQAY 361
L+ +
Sbjct: 457 LEALEVF 463
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 140/315 (44%), Gaps = 7/315 (2%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE----WFEKMPSFE-CEPDDNLSASM 252
LF EM G +P+ ++ L+ KA+E + +KM E C+P+ +
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ +A+ G VD +L+ D F+ ++ YG +G +V + M+
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
KP+++T+N L+ + G+ + + ++ ++++ P PT+ +++ Y +AR + A
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
V+K+M + + Y + M + G+ A +IF ++ S D T +++ +Y
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGES-DRVLKASTLNAMLEVY 393
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
G EA+ L + P+ L Y KA + V + ++ GI P+
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK 453
Query: 493 R-FCDCLLYVATQIP 506
R F + L +++P
Sbjct: 454 RFFLEALEVFGSRLP 468
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 11/242 (4%)
Query: 266 LSLYDRAKTEKWRV-DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL-- 322
L ++ + ++W + D +S LI + G G + ++S+MK G +P+ YN L
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 323 --LYAMGRAKRARDAKTIYEEMVKNGF---SPNWPTYAALLQAYCRARCSEDALSVYKEM 377
L+ +AK + ++M G PN TY LL+A+ ++ + +++K++
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL 234
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
D +N + D G E + M+S+ +C+PD T+ LI+ Y +
Sbjct: 235 DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLIDSYGKKQE 293
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
+ E ++R +P + S++ YGKA+ D +F ++ D+ P +C
Sbjct: 294 FEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYEC 353
Query: 498 LL 499
++
Sbjct: 354 MI 355
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW-F 234
++ +NV + + + ++F + E+ F +++ KP L TF++++ + KA EW F
Sbjct: 278 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA-EWVF 336
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+KM P MI +Y G+V A +++ + +A++++Y +
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G Y ++ + P+ TY L A +A + + ++M K+G PN +
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Query: 355 AALLQAY 361
L+ +
Sbjct: 457 LEALEVF 463
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+AV+ +E ECE A I Y R+ + A L+D + + VA+S ++
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
MYG + + + + MK G KPN+ YN+L+ GRA R A+ I++EM +
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P+ +Y +++ AY R++ E + +Y+E + +D+ + ++ + + DE M++
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRL 550
Query: 409 FADMKSSGDCQPDNFTYTSLIN 430
DMK G + D Y+S +N
Sbjct: 551 LQDMKVEG-TRLDARLYSSALN 571
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 1/255 (0%)
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+A+E E+M L + +I +A V + L+ A +K D ++
Sbjct: 266 EALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVV 325
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
MY GN + L V + M+ K ++ + + +A +YE +K
Sbjct: 326 LMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECE 385
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
TYA + AYCR A ++ EM +KG D V Y+ + DM +A+++
Sbjct: 386 AGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRL 445
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
A MK G C+P+ + Y SLI+M+ + AE + EM R P+ ++ TS++ Y
Sbjct: 446 MAKMKQRG-CKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYN 504
Query: 469 KAKRADDVVKIFNQL 483
++K + V+++ +
Sbjct: 505 RSKELERCVELYQEF 519
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 134/302 (44%), Gaps = 5/302 (1%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A ++ +EM +G+ + +S L+ + + F++ + D + ++
Sbjct: 267 ALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVL 326
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+Y R GN++ L + + + +V A++ + + + VY +
Sbjct: 327 MYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEA 386
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
VTY + A R ++ A+ +++EMVK GF Y+ ++ Y + R DA+ +
Sbjct: 387 GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLM 446
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+MK++G + +YN L DM + A KI+ +MK + PD +YTS+I+ Y+
Sbjct: 447 AKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA-KVLPDKVSYTSMISAYNR 505
Query: 435 MGKVTEAEALLNE--MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
++ L E M R + + + +V ++ K R D+++++ + G D
Sbjct: 506 SKELERCVELYQEFRMNRGKIDRAMAGI--MVGVFSKTSRIDELMRLLQDMKVEGTRLDA 563
Query: 493 RF 494
R
Sbjct: 564 RL 565
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 84/184 (45%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V Y + + + ++ + +AE LFDEM+++G ++ +S ++ AV K
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M C+P+ + S+I ++ R ++ A ++ K K D V+++++I Y S
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ C+ +Y + ++ K + ++ + R + + ++M G + Y++
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 357 LLQA 360
L A
Sbjct: 569 ALNA 572
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 72/151 (47%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV Y+ + ++ + + A +L +M QRG KPN+ +++L+ +A + ++
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK 482
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M + PD SMI Y R ++ + LY + + ++D ++ ++ +
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTS 542
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
D + + DMKV G + + Y++ L A+
Sbjct: 543 RIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 127/323 (39%), Gaps = 31/323 (9%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
D+ML +G+K N + S ++ C + +A+E F++ D +
Sbjct: 340 FLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALS 399
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
++G V+ A L K D + ++ LI Y + G L + +M G P+++
Sbjct: 400 KLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI 459
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR------------ 365
TYN L+ + R + IYE M G PN T + +++ C AR
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 366 ---CSEDALSVYKEMKEKGKD-------------VDKVLY-NMLFDMCAHFGNADEAMKI 408
C E+ S K E G + K +Y + F +C G ++A +
Sbjct: 520 EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIE-GYLEKAHDV 578
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
M S+ +P +I + + V EA+ L + M+ G P++ T ++H Y
Sbjct: 579 LKKM-SAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 469 KAKRADDVVKIFNQLLDLGISPD 491
+ +F + GI PD
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPD 660
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 54/333 (16%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEP------------- 244
L DEM+ G+ P+LIT++ LV+ + + +E +E+M + +P
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 245 --------DDNLS----------ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
+D S AS + Y G A + R + + + +
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIK 561
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
L + G + V M +P ++ A + R+A+ +++ MV+ G
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD-----------M 395
P+ TY ++ YCR + A S++++MK++G D V Y +L D
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHET 681
Query: 396 CAHFGN-----ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
C+ G A E ++ F S+ D YT LI+ M + +A L + MI
Sbjct: 682 CSVQGEVGKRKASEVLREF----SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 451 CGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
G EP+++A T+L+ Y + D V + +L
Sbjct: 738 SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 331 RARDAKTIYEEMVKNGFSPNWPTYAALL-------------------------------- 358
+ + A+++ EM + GF + A++
Sbjct: 298 KMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVS 357
Query: 359 ---QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
Q YC+ +AL +KE ++ +D+V YN+ FD + G +EA ++ +MK
Sbjct: 358 LILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR 417
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD YT+LI+ Y GKV +A L++EMI G P+++ LV + ++
Sbjct: 418 G-IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEE 476
Query: 476 VVKIFNQLLDLGISPD 491
V++I+ ++ G P+
Sbjct: 477 VLEIYERMKAEGPKPN 492
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 13/199 (6%)
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV------YSDMKV 309
Y + N+ AL D+ + +V+ V S +++ Y D CL + DM +
Sbjct: 328 YCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC---KMDMCLEALEKFKEFRDMNI 384
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
+ V YN A+ + R +A + +EM G P+ Y L+ YC D
Sbjct: 385 F---LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD 441
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
AL + EM G D + YN+L A G+ +E ++I+ MK+ G +P+ T + +I
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP-KPNAVTNSVII 500
Query: 430 NMYSCMGKVTEAEALLNEM 448
KV EAE + +
Sbjct: 501 EGLCFARKVKEAEDFFSSL 519
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 164/341 (48%), Gaps = 22/341 (6%)
Query: 148 IVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGV 207
+++D+ V + A + F P ++++ + L +++ A +LF M + G+
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGM--PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEP----DDNLSASMIYVYARIGNVD 263
KP++ S+++ ++C+ H A+ + ++ ++ + D ++ S+I +YA+ +
Sbjct: 347 KPDMYACSSIL---TSCASLH-ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMY---GMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
A ++D D V F+A+I+ Y G L+++ DM+ +P+++T+
Sbjct: 403 DARKVFDIFAA----ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
+LL A +K I+ M K G + + +AL+ Y C +D+ V+ EMK K
Sbjct: 459 SLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
D V++N +F +EA+ +F +++ S + +PD FT+ +++ + V
Sbjct: 519 ----DLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQL 573
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFN 481
+ ++++ G E N +L+ +Y K +D K F+
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD 614
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 169/393 (43%), Gaps = 37/393 (9%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMI-VLDNMVNPETALLAFEYF 166
T L + + SL S ++Q M GL ++ A+I V N + + L F+
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
K K +V++N + + + A LF E+ +P+ TF+ +V A +
Sbjct: 516 KVK-----DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 227 PHKAVEWFEKM--PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
E+ ++ EC P ++ +++ +YA+ G+ + A +D A + D V +
Sbjct: 571 VQLGQEFHCQLLKRGLECNP--YITNALLDMYAKCGSPEDAHKAFDSAASR----DVVCW 624
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+++I Y G L + M G +PN +T+ +L A A D +E M++
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
G P Y ++ RA A + ++M K +++ L CA GN +
Sbjct: 685 FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPA---AIVWRSLLSGCAKAGNVEL 741
Query: 405 A-----MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF--EP-- 455
A M I +D K SG ++T L N+Y+ G TEA+ + M G EP
Sbjct: 742 AEHAAEMAILSDPKDSG-------SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGR 794
Query: 456 NILALTSLVHLY-GKAK---RADDVVKIFNQLL 484
+ + + VH++ K K +A+ + ++ + LL
Sbjct: 795 SWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 138/340 (40%), Gaps = 38/340 (11%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWFEK 236
L N+ + L+ A K+F++M +R NL+++ST+V AC V + E
Sbjct: 81 LSNILINLYSRAGGMVYARKVFEKMPER----NLVSWSTMVSACNHHGIYEESLVVFLEF 136
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVD--MALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+ + P++ + +S I + + M L + D + LI Y
Sbjct: 137 WRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKD 196
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
GN D V+ + + + VT+ ++ + R+ + ++ +++++ P+
Sbjct: 197 GNIDYARLVFDAL----PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+ +L A E ++ + G ++D L N+L D G A K+F M +
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL----------- 463
+ ++T+L++ Y EA L M + G +P++ A +S+
Sbjct: 313 -----KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 464 ----VHLYG-KAKRADDVVKIFNQLLDLGISPDDRFCDCL 498
VH Y KA +D + N L+D+ CDCL
Sbjct: 368 FGTQVHAYTIKANLGNDSY-VTNSLIDMYAK-----CDCL 401
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
AE+++ EM GVK +++++S++++C S +K ++ F++M EPD + ++++
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
A+ V A +L + EK G +P
Sbjct: 346 ALAKASFVSEARNLMKTMEEEK----------------------------------GIEP 371
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+VTYN+L+ + +A++ +AK +++EM++ G P TY A ++ R E+ +
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELL 428
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+M++ G + Y ML + + D + ++ +MK PD +Y +I+
Sbjct: 429 AKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK-TVGPDLSSYIVMIHGLFL 487
Query: 435 MGKVTEAEALLNEMIRCGFEPN 456
GK+ EA EM G PN
Sbjct: 488 NGKIEEAYGYYKEMKDKGMRPN 509
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 172/394 (43%), Gaps = 22/394 (5%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEML----VKGLGENVTEREAMIVLDNMVNP-ETALLA 162
S + K++K + C +++ L VK E V E +L + N ETA
Sbjct: 93 VSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVE-----ILSRVRNDWETAFTF 147
Query: 163 FEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
F + ++ R V Y+ + + +++ F A L DEM R P+L+ TL+
Sbjct: 148 FVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIR 205
Query: 223 TCSVPH---KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
H KA+ F F+ E + S++ R NV A L +K+
Sbjct: 206 KYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPF 264
Query: 280 DTVAFSALIKMY-GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
D +F+ ++ + + G+ V+ +M +G K ++V+Y++++ + +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKE-KGKDVDKVLYNMLFDMCA 397
++ M K P+ Y A++ A +A +A ++ K M+E KG + + V YN L
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
+EA ++F +M G P TY + + + +V E LL +M + G EP +
Sbjct: 385 KARKTEEAKQVFDEMLEKG-LFPTIRTYHAFMRILRTGEEVFE---LLAKMRKMGCEPTV 440
Query: 458 LALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L+ + + D+V+ +++++ + + PD
Sbjct: 441 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPD 474
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 116/247 (46%), Gaps = 7/247 (2%)
Query: 251 SMIYVYARIGNVDMALSLYDRA-KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
SMI + ++ D A +L D K V++ +I+ Y + ++ + K
Sbjct: 166 SMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR 225
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS-E 368
+ + + +LL A+ R K DA + K+ + + ++ +L +C S
Sbjct: 226 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIF-CNKDKYPFDAKSFNIVLNGWCNVIGSPR 284
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC-QPDNFTYTS 427
+A V+ EM G D V Y+ + + G+ ++ +K+F MK +C +PD Y +
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK--ECIEPDRKVYNA 342
Query: 428 LINMYSCMGKVTEAEALLNEMIR-CGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+++ + V+EA L+ M G EPN++ SL+ KA++ ++ ++F+++L+
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 402
Query: 487 GISPDDR 493
G+ P R
Sbjct: 403 GLFPTIR 409
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
++ I+P +VV YN +K + + A+++FDEML++G+ P + T+ + T
Sbjct: 366 EKGIEP--NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT--- 420
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
+ E KM CEP +I R + D L L+D K + D ++
Sbjct: 421 GEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIV 480
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
+I ++G + Y +MK G +PN
Sbjct: 481 MIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSP---NWPTYAALLQAYCRARCSEDALSV-- 373
Y++++ +G+ ++ A T+ +EM K FSP N T +++ YC A++
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 374 -YKEMK-EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM-KSSGDCQPDNFTYTSLIN 430
YK K E G D ++L +C + +D IF + K D + N N
Sbjct: 222 AYKRFKLEMGIDD---FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+ +G EAE + EM G + ++++ +S++ Y K + V+K+F+++ I P
Sbjct: 279 V---IGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 491 DDRFCDCLLY 500
D + + +++
Sbjct: 336 DRKVYNAVVH 345
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 125/262 (47%), Gaps = 6/262 (2%)
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA-KTEKWRVDTVAFSALIKMYG 292
+++M S + N +IY + + + ALS++ R K W + V+F+ +I
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWP-NVVSFNMMIDGAC 264
Query: 293 MSGNYDACLSVYSDMKVLGAK---PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
+G+ L + M ++ PN VTYN+++ +A R A+ I +MVK+G
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
N TY AL+ AY RA S++AL + EM KG V+ V+YN + G+ + AM +
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
DM S + Q D FT ++ G V EA ++ +I+ +L+H + +
Sbjct: 385 RDMNSK-NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 470 AKRADDVVKIFNQLLDLGISPD 491
K+ +I +L G+S D
Sbjct: 444 DKKLACADQILGSMLVQGLSLD 465
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 13/322 (4%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ V YN + F + AE++ +M++ GV N T+ LV +A+
Sbjct: 290 NAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
++M S + + S++Y G+++ A+S+ ++ ++D + +++ +
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRN 409
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G + + ++V +N L++ R K+ A I M+ G S + ++
Sbjct: 410 GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISF 469
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
L+ Y + E AL +Y M + K + V+YN + + + G A A + M+
Sbjct: 470 GTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI 529
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALT---SLVHL--YGK 469
D TY +L+N G V EA+ +L++M + E ++ +T + HL +G
Sbjct: 530 -----KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584
Query: 470 AKRADDVVKIFNQLLDLGISPD 491
++A +V+K +++ G+ PD
Sbjct: 585 YEKAKEVLKF---MVERGVVPD 603
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 102/220 (46%), Gaps = 2/220 (0%)
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
F +L++ +G+ V + G ++ NN + + +Y+EM
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
G+ N T+ ++ ++C+ +ALSV+ M + G + V +NM+ D G+
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 403 DEAMKIFADMK--SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
A+++ M S P+ TY S+IN + G++ AE + +M++ G + N
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+LV YG+A +D+ +++ +++ G+ + + ++Y
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
Query: 242 CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
C ++ S++ + G+ A + ++ + E + V A + + D
Sbjct: 144 CGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFW 203
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
VY +M LG N+ T+N ++Y+ + + +A +++ M+K G PN ++ ++
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 362 CRARCSEDALSVYKEMKEKGKDV---DKVLYNMLFDMCAHFGNADEAMKIFADMKSSG-D 417
C+ AL + +M + + V YN + + G D A +I DM SG D
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
C TY +L++ Y G EA L +EM G N + S+V+
Sbjct: 324 CNER--TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
Query: 175 HVVLYN-VTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
+ V+YN + LF E D A + +M + ++ + T + +V +AVE+
Sbjct: 360 NTVIYNSIVYWLFME-GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
++ + D ++++ + R + A + + +D ++F LI Y
Sbjct: 419 QRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM-VKNGFSPNWP 352
G + L +Y M + N+V YN+++ + + A A+ + M +K+
Sbjct: 479 EGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD-----IV 533
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKG--KDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
TY LL + E+A + +M+++ K V V +N++ + FG+ ++A ++
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Query: 411 DMKSSGDCQPDNFTYTSLINMYS 433
M G PD+ TY +LI +S
Sbjct: 594 FMVERG-VVPDSITYGTLITSFS 615
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 31/319 (9%)
Query: 146 AMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQR 205
A IV D P+T L+N+ ++ F + R+ L+ ML
Sbjct: 68 AQIVFDGFDRPDT------------------FLWNLMIRGFSCSDEPERSLLLYQRMLCS 109
Query: 206 GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMA 265
N TF +L+ S S + + ++ E D S+I YA GN +A
Sbjct: 110 SAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA 169
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
L+DR D V+++++IK Y +G D L+++ M A+ N +++ ++
Sbjct: 170 HLLFDRIPEP----DDVSWNSVIKGYVKAGKMDIALTLFRKM----AEKNAISWTTMISG 221
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
+A ++A ++ EM + P+ + A L A + E ++ + + +D
Sbjct: 222 YVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMD 281
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
VL +L DM A G +EA+++F ++K + +T+LI+ Y+ G EA +
Sbjct: 282 SVLGCVLIDMYAKCGEMEEALEVFKNIK-----KKSVQAWTALISGYAYHGHGREAISKF 336
Query: 446 NEMIRCGFEPNILALTSLV 464
EM + G +PN++ T+++
Sbjct: 337 MEMQKMGIKPNVITFTAVL 355
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V +N +K + + A LF +M ++ N I+++T+++ + +A++ F +
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHE 237
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M + + EPD+ A+ + A++G ++ ++ + R+D+V LI MY G
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
+ L V+ ++K K ++ + L+ R+A + + EM K G PN T+ A
Sbjct: 298 MEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 353
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVL--YNMLFDMCAHFGNADEAMKIFADM 412
+L A E+ ++ M E+ ++ + Y + D+ G DEA + +M
Sbjct: 354 VLTACSYTGLVEEGKLIFYSM-ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 12/330 (3%)
Query: 176 VVLYNVTL-KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
V YN+ + +L +E K A DE ++G+ PN ++++ L+ A +
Sbjct: 345 VATYNILINRLCKEGKK-EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVD----MALSLYDRAKTEKWRVDTVAFSALIKM 290
+M C+PD +I+ G++D M + L DR + + + S L K
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK- 462
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+G + ++S+M P+ Y L+ R+ +A+ ++ V+ G +
Sbjct: 463 ---TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
+ A+++ +CR+ ++AL+ M E+ DK Y+ + D + A+KIF
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH-LYGK 469
M+ + C+P+ TYTSLIN + C G AE EM PN++ T+L+ L +
Sbjct: 580 YMEKN-KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 470 AKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ + V + ++ P++ +CLL
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 162/375 (43%), Gaps = 22/375 (5%)
Query: 122 CNPTEQQVSEMLVKG-LGENVTEREAMIVLDNMV--------NPETALLAFEYFKQK-IK 171
CN + +V L++G G+ IV N + + E A L F+ K K
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPN---IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV---PH 228
P + + F + DF +++L E+ +RG++ ++ + ++ P
Sbjct: 273 PTLET--FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+++ W + + +C+PD +I + G ++A+ D A + + ++++ LI
Sbjct: 331 ESIGW---IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ Y S YD + M G KP++VTY L++ + + DA + +++ G S
Sbjct: 388 QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P+ Y L+ C+ A ++ EM ++ D +Y L D G+ DEA K+
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
F+ G + D + ++I + G + EA A +N M P+ ++++ Y
Sbjct: 508 FSLSVEKG-VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 469 KAKRADDVVKIFNQL 483
K + +KIF +
Sbjct: 567 KQQDMATAIKIFRYM 581
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 170/421 (40%), Gaps = 20/421 (4%)
Query: 73 LDNPDAKSPPSSKSRIWVNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEM 132
L NP A + S +S + P +PR K+L+ + + + + ++ LD C E+
Sbjct: 12 LSNPHASN--SFRSHL---PITPRIKKLVSDTVSILKTQ-QNWSQILDDCFADEEVRFVD 65
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDF 192
+ + + + + E + L + ++ E E+F + LKL + F
Sbjct: 66 ISPFVFDRIQDVEIGVKLFDWLSSEKK---DEFFSNGFACSSF-------LKLLARYRIF 115
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS-FECEPDDNLSAS 251
E + + VK S ++ + KAVE ++ + ++ PD S
Sbjct: 116 NEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNS 175
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
++ + + + A +YD VD + L+K G + + G
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKG 235
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
PN+V YN ++ + +A +++E+ GF P T+ ++ +C+ +
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFG-NADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+ E+KE+G V N + D G D A I + + DC+PD TY LIN
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII--ANDCKPDVATYNILIN 353
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
GK A L+E + G PN L+ L+ Y K+K D K+ Q+ + G P
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 491 D 491
D
Sbjct: 414 D 414
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 25/309 (8%)
Query: 160 LLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
LL E + I P +V Y + F DF A K+F +++GVK +++ + ++
Sbjct: 471 LLFSEMLDRNILPDAYV--YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+ +A+ +M PD +++I Y + ++ A+ ++ + K +
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ V +++LI + G++ + +M++ PN+VTY L+ ++ + + Y
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 340 EE-MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
E M+ N PN T+ LLQ + + K KVL D H
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVK------------------KTSGKVLAEP--DGSNH 688
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G + + F MKS G Y S + G V A ++M++ GF P+ +
Sbjct: 689 -GQSSLFSEFFHRMKSDG-WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPV 746
Query: 459 ALTSLVHLY 467
+ +++H +
Sbjct: 747 SFAAILHGF 755
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 149 VLDNMVNPE---TALLAFEYF-KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ 204
++D V + TA+ F Y K K KP +VV Y + F DF AE+ F EM
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKP--NVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 205 RGVKPNLITFSTLV-ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVD 263
R + PN++T++TL+ + A S KAV ++E M + +C P++ ++ +
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF------- 671
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLS-VYSDMKVLGAKPNMVTYNNL 322
V + L + G + + S + MK G + YN+
Sbjct: 672 ---------------VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSA 716
Query: 323 LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV-YKEMKEKG 381
L + + A ++MVK GFSP+ ++AA+L +C S+ ++ + + EKG
Sbjct: 717 LVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKG 776
Query: 382 KDV 384
+V
Sbjct: 777 LEV 779
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
++++ ARI +D A+ + DT+ ++ +I G+ L + DM +
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
G+ P+++TYN ++ M A A +++ ++NG P TY L++ CR S
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
A+ V ++M +G D V YN L + GN +E + + S G + + TY +L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG-LELNTVTYNTLL 321
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
+ E E +LN M + + P ++ L++ KA+ + F Q+L+
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 490 PD 491
PD
Sbjct: 382 PD 383
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 13/357 (3%)
Query: 158 TALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAE---KLFDEMLQRGVKPNLITF 214
TAL+ E P V+ YN + R + D+G AE + + + LQ G P +IT+
Sbjct: 192 TALVLLEDMSLSGSPP-DVITYNTVI---RCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
+ LV +A+E E M C PD S++ R GN++ S+ +
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
++TV ++ L+ +D + + M P ++TYN L+ + +A+
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 335 AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
A + +M++ P+ TY +L A + +DA+ + +K + YN + D
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
A G +A++++ M +G PD+ T SLI + V EA +L E G
Sbjct: 428 GLAKKGLMKKALELYHQMLDAG-IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNG 486
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELG 511
++ K K + +++ +L G PD+ +Y A +E+G
Sbjct: 487 IRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET-----IYTAIVKGVEEMG 538
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 36/267 (13%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+ V YN L + + E++ + M Q P +IT++ L+ + +A+++F
Sbjct: 313 NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 372
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+M +C PD +++ ++ G VD D + L+K
Sbjct: 373 YQMLEQKCLPDIVTYNTVLGAMSKEGMVD----------------DAIELLGLLK----- 411
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
+ C P ++TYN+++ + + + A +Y +M+ G P+ T
Sbjct: 412 ---NTC-----------CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+L+ +CRA E+A V KE +G + Y ++ + A+++ M +
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEA 441
G C+PD YT+++ MG +EA
Sbjct: 518 GG-CKPDETIYTAIVKGVEEMGMGSEA 543
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P+ + +NL+ + R + A I MV +G P+ TY ++ C+ AL +
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
++M G D + YN + +GNA++A++ + D +G C P TYT L+ +
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG-CPPFMITYTVLVELVC 255
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
A +L +M G P+I+ SLV+ + ++V + +L G+
Sbjct: 256 RYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL 310
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V+ YN+ + + + RA F +ML++ P+++T++T++ S + A+E
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ + C P L Y+ +D +A L+K
Sbjct: 409 LLKNTCCPP--------------------GLITYNSV------IDGLAKKGLMK------ 436
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
L +Y M G P+ +T +L+Y RA +A + +E G TY
Sbjct: 437 ---KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYR 493
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
++Q C+ + E A+ V + M G D+ +Y + G EA+
Sbjct: 494 LVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
T N +L+ + + DA + E M ++ P++P+ + L++ R + A+ + + M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
G D + YNM+ G+ A+ + DM SG PD TY ++I G
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS-PPDVITYNTVIRCMFDYGN 224
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+A + ++ G P ++ T LV L + + +++ + G PD
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 162/352 (46%), Gaps = 23/352 (6%)
Query: 198 LFDEMLQRGVKPNLITF-STLVACA--STCSVPHKAVEWFEKMPSFE--CEPDDNLSASM 252
LF M + ++PN +T S L AC + S K + F SF C D+ L+A+
Sbjct: 238 LFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGF----SFRHGCHADERLTAAF 293
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ +Y R GNV ++ L++ +K D V +S++I Y +G+ +++ + M+ G
Sbjct: 294 MTMYCRCGNVSLSRVLFETSKVR----DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGI 349
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+ N VT ++ A + A T++ +++K GF + AL+ Y + A
Sbjct: 350 EANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAARE 409
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
V+ E+ EK D V ++ + + G+ EA++IF M G + D+ + ++++
Sbjct: 410 VFYELTEK----DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH-EVDDMAFLAILSAC 464
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+ G V EA+ + + + + ++L G+ + DD F +++ + P
Sbjct: 465 NHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDA---FEVTINMPMKPSA 521
Query: 493 RFCDCLLYVATQIPRQEL-GKITAC-IEKAKPKLGSVVRYLTEEHEGDGDFR 542
R LL R ++ GKI A + K++P + L++ H G++
Sbjct: 522 RIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYH 573
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 150/343 (43%), Gaps = 43/343 (12%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V+ N + ++ + K+FDEML R + +++ +++ + ++A++ ++
Sbjct: 83 VVSNSLISMYAKFSRKYAVRKVFDEMLHR----DTVSYCSIINSCCQDGLLYEAMKLIKE 138
Query: 237 MPSFECEPDDNLSASMIYVYARIGN----------------------------VDMALSL 268
M + P L AS++ + R+G+ VDM L
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 269 YDRAKT----EKWRV-DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
D A ++ V + V+++A+I + NY+ + ++ M+ +PN VT ++L
Sbjct: 199 DDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVL 258
Query: 324 YAMGRAKRARD-AKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
A K I+ ++G + AA + YC RC +LS + + E K
Sbjct: 259 PACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC--RCGNVSLS--RVLFETSK 314
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
D V+++ + A G+ E M + M+ G + ++ T ++++ + ++ A
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG-IEANSVTLLAIVSACTNSTLLSFAS 373
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+ +++++CGF +IL +L+ +Y K ++F +L +
Sbjct: 374 TVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE 416
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 12/279 (4%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
R VV+++ + + E D L ++M + G++ N +T +V+ + ++ A
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
++ L ++I +YA+ G++ A ++ TEK D V++S++I YG+
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL-TEK---DLVSWSSMINAYGL 431
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G+ L ++ M G + + + + +L A A +A+TI+ + K
Sbjct: 432 HGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEH 491
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD-- 411
YA + R +DA V M K +++ L C G D A KI A+
Sbjct: 492 YACYINLLGRFGKIDDAFEVTINMPMKP---SARIWSSLLSACETHGRLDVAGKIIANEL 548
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
MKS D P N+ S I+ S G AE + M R
Sbjct: 549 MKSEPD-NPANYVLLSKIHTES--GNYHAAEEVRRVMQR 584
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 167/358 (46%), Gaps = 26/358 (7%)
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK 229
+KP R + Y K + + +L +++ G++ + +T++ TC +
Sbjct: 122 VKPQR--LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIE 179
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
A F M F+ + SMI +A+ G +D A +L+D E + + V+++++I
Sbjct: 180 AWRIFLGMIGFDVVAWN----SMIMGFAKCGLIDQAQNLFD----EMPQRNGVSWNSMIS 231
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
+ +G + L ++ +M+ KP+ T +LL A + + I+E +V+N F
Sbjct: 232 GFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL 291
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
N AL+ YC+ C E+ L+V++ +K +N + A+ G + AM +F
Sbjct: 292 NSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC----WNSMILGLANNGFEERAMDLF 347
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILALTSLVHLYG 468
++++ SG +PD+ ++ ++ + G+V A+ M + EP+I T +V++ G
Sbjct: 348 SELERSG-LEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLG 406
Query: 469 KA---KRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA-CIEKAKP 522
A + A+ ++K ++ + D LL +I E+ K A C++K P
Sbjct: 407 GAGLLEEAEALIK------NMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDP 458
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 136/285 (47%), Gaps = 23/285 (8%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
K+ R V + + + ++ + G A KLFDE+ +R + ++++++++ S
Sbjct: 160 KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAK 215
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A++ F KM EPD+ SM+ + +G++ L + A T+K + T S LI
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
MYG G+ D+ V++ M K + V + ++ + ++ +A ++ EM K G S
Sbjct: 276 SMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM-----LFDMCAHFGNAD 403
P+ T + +L A C S AL + K+++ ++ + +N+ L DM G +
Sbjct: 332 PDAGTLSTVLSA-C---GSVGALELGKQIETHASELS-LQHNIYVATGLVDMYGKCGRVE 386
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
EA+++F M + T+ ++I Y+ G EA L + M
Sbjct: 387 EALRVFEAMPVKNEA-----TWNAMITAYAHQGHAKEALLLFDRM 426
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 138/295 (46%), Gaps = 13/295 (4%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFS-TLVACASTCSVP-HKAVEWFEKMPSFECEPDDNL 248
D A L+ M G+KP+ T++ +ACA + ++V + E D ++
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH--SSLFKVGLERDVHI 169
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
+ S+I +YA+ G V A L+D TE+ DTV+++++I Y +G + ++ M+
Sbjct: 170 NHSLIMMYAKCGQVGYARKLFDEI-TER---DTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
G +P+ T ++L A R + + E + + + L+ Y + +
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
A V+ +M +K D+V + + + + G + EA K+F +M+ +G PD T +++
Sbjct: 286 SARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG-VSPDAGTLSTV 340
Query: 429 INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
++ +G + + + + NI T LV +YGK R ++ +++F +
Sbjct: 341 LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 36/248 (14%)
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP--- 352
+++A LS+Y MK G KP+ TYN + A + + ++++ + K G +
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINH 171
Query: 353 ----------------------------TYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
++ +++ Y A ++DA+ ++++M+E+G +
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
D+ + C+H G+ ++ +M + F + LI+MY G + A +
Sbjct: 232 DERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQ 504
N+MI+ + +A T+++ +Y + ++ + K+F ++ G+SPD +L
Sbjct: 291 FNQMIK----KDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 505 IPRQELGK 512
+ ELGK
Sbjct: 347 VGALELGK 354
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
GF + TY +L + A + SV+ MKEKG +D V Y L + G+ D A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
M+++ +M+ +G C+P +YT+ + M G+V EA + EM+R PN T L+
Sbjct: 177 MRLWEEMRDNG-CEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 466 LYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIEKAKPKLG 525
+ ++ + IF ++ ++G+ PD C+ L +A + E +T + K G
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNIL--IAKALKFGETSFMTRVLVYMKEN-G 292
Query: 526 SVVRY 530
V+RY
Sbjct: 293 VVLRY 297
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 6/216 (2%)
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
W ++ F+ D +M+ ++ G + S++ K + +DTV +++LI
Sbjct: 111 WAAQIKGFK--HDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVS 168
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
SG+ D + ++ +M+ G +P +V+Y + + R +A +Y+EM+++ SPN
Sbjct: 169 SSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCH 228
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
TY L++ E+AL ++ +M+E G DK N+L FG ++ M
Sbjct: 229 TYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM 288
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
K +G Y + + E++ LL E+
Sbjct: 289 KENGVV----LRYPIFVEALETLKAAGESDDLLREV 320
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 135/317 (42%), Gaps = 4/317 (1%)
Query: 104 SYAATSSPLEKLAKSLDSCNPTEQQVSEM-LVKGLGENVTEREAMIVLDNMVNPETALLA 162
SY TS E+LAKSL S E + +K L +++ +++ A
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQA 165
Query: 163 FEYFK---QKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
E F + + + V +YN L ++K F A L M+++G+KP+ T++ LV
Sbjct: 166 VELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+ +A E+ ++M P +I G ++ A + + +
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D F+ LI+ SG + C+ +Y LG ++ TY L+ A+ + + +A +
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
V++G P YA +++ CR +DA S + +MK K ++ +Y ML MC
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 400 GNADEAMKIFADMKSSG 416
G +A +M G
Sbjct: 406 GKFVDAANYLVEMTEMG 422
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+T+ F +I+ YG +G+ D + +++ + K LG + + YN+LL+A+ K A +
Sbjct: 147 ETLCF--IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYAL 204
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
M++ G P+ TYA L+ +C A ++A EM +G + ++L + +
Sbjct: 205 IRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLN 264
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G + A ++ + M + G PD T+ LI S G+V + + G +I
Sbjct: 265 AGYLESAKEMVSKM-TKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 323
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+L+ K + D+ ++ N ++ G P
Sbjct: 324 TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 252 MIYVYARIGNVDMALSLYDRA-KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
+I Y + G+VD A+ L++ KT + +++L+ + ++ M
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G KP+ TY L+ A + ++A+ +EM + GF+P L++ A E A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+ +M + G D +N+L + + G + ++++ G C D TY +LI
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV-DIDTYKTLIP 330
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEP 455
S +GK+ EA LLN + G +P
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKP 355
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 168/382 (43%), Gaps = 23/382 (6%)
Query: 119 LDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVL 178
LD N QQ KG N ++LDN+V + LA + ++K
Sbjct: 73 LDIFNKASQQ------KGFNHNNATYS--VLLDNLVRHK-KFLAVDAILHQMKYETCRFQ 123
Query: 179 YNVTLKLFREIKDFGRAEKLFD-----EMLQRGVKPNLITFST---LVACASTCSVPHKA 230
++ L L R +K+ + +++ R VKP+L ST L+ + ++ K
Sbjct: 124 ESLFLNLMRHFSRSDLHDKVMEMFNLIQVIAR-VKPSLNAISTCLNLLIDSGEVNLSRKL 182
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV-DTVAFSALIK 289
+ + + + +P+ + ++ + + G+++ A + + K +++ +S L+
Sbjct: 183 LLYAKH--NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 290 MYGMSGNYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
+ ++ DM G P+ VT+N ++ RA AK I + M KNG +
Sbjct: 241 CLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
PN Y+AL+ +C+ ++A + E+K+ G +D V Y L + G DEAMK+
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+MK+S C+ D TY ++ S G+ EA +L++ G N + +++
Sbjct: 361 LGEMKAS-RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 469 KAKRADDVVKIFNQLLDLGISP 490
+ VK + + + GI P
Sbjct: 420 CNGELEKAVKFLSVMSERGIWP 441
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG-AKPNM---VTYNNL 322
++ + K E R F L++ + S +D + +++ ++V+ KP++ T NL
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169
Query: 323 LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
L G +R K + G PN + L++ +C+ A V +EMK G
Sbjct: 170 LIDSGEVNLSR--KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGI 227
Query: 383 DV-DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+ + Y+ L D + EA+++F DM S PD T+ +IN + G+V A
Sbjct: 228 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ +L+ M + G PN+ ++L++ + K + + + F+++ G+ D
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 149/344 (43%), Gaps = 62/344 (18%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
++VV +N +K + ++ D A LFD+M R + I+++T++ S A
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFAL 334
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
F +MP+ D + M+ YA +GNV++A +++ + TV+++++I Y
Sbjct: 335 FSEMPN----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKH----TVSWNSIIAAYEK 386
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
+ +Y + ++ M + G KP+ T +LL A R +++ +VK P+ P
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPV 445
Query: 354 YAALLQAYCRARCSE----------------------------------DALSVYKEMKE 379
+ AL+ Y +RC E +AL+++ MK
Sbjct: 446 HNALITMY--SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVT 439
G + + + + CAH G DEA F M S +P Y+SL+N+ S G+
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
EA ++ M FEP+ +L+ D +I+N +
Sbjct: 564 EAMYIITSM---PFEPDKTVWGALL----------DACRIYNNV 594
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 14/290 (4%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
LA YF++ P +H V +N + + + KD+ A LF M G KP+ T ++L++
Sbjct: 361 LARHYFEKT--PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS- 417
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD 280
AST V + ++ PD + ++I +Y+R G + + ++D K ++ +
Sbjct: 418 ASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---E 474
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
+ ++A+I Y GN L+++ MK G P+ +T+ ++L A A +AK +
Sbjct: 475 VITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFV 534
Query: 341 EMVK-NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
M+ P Y++L+ E+A+ + M + DK ++ L D C +
Sbjct: 535 SMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDACRIY 591
Query: 400 GNADEAMKIFADMKSSGDCQPDNFT-YTSLINMYSCMGKVTEAEALLNEM 448
N A + A+ S +P++ T Y L NMY+ MG EA + M
Sbjct: 592 NNVGLA-HVAAEAMSR--LEPESSTPYVLLYNMYADMGLWDEASQVRMNM 638
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 185/427 (43%), Gaps = 88/427 (20%)
Query: 137 LGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAE 196
LG T +E L+ M+ A + F++ AR+ V +N + + + ++ +A
Sbjct: 38 LGFRATNKE----LNQMIRSGYIAEARDIFEKL--EARNTVTWNTMISGYVKRREMNQAR 91
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCS---VPHKAVEWFEKMPSFECEPDDNLS-ASM 252
KLFD M +R V +T++T+++ +C +A + F++MPS D+ S +M
Sbjct: 92 KLFDVMPKRDV----VTWNTMISGYVSCGGIRFLEEARKLFDEMPS-----RDSFSWNTM 142
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK---- 308
I YA+ + AL L+++ + V++SA+I + +G D+ + ++ M
Sbjct: 143 ISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDS 198
Query: 309 ---------------------VLGAKPNMVT--------YNNLLYAMGRAKRARDAKTIY 339
VLG ++V+ YN L+ G+ + A+ ++
Sbjct: 199 SPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLF 258
Query: 340 EEM-----------VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
+++ + F N ++ ++++AY + A ++ +MK++ D +
Sbjct: 259 DQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTIS 314
Query: 389 YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
+N + D H ++A +F++M + D ++ +++ Y+ +G V E+
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNR-----DAHSWNMMVSGYASVGNV--------EL 361
Query: 449 IRCGF----EPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQ 504
R F E + ++ S++ Y K K + V +F ++ G PD LL +T
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
Query: 505 IPRQELG 511
+ LG
Sbjct: 422 LVNLRLG 428
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 162/349 (46%), Gaps = 23/349 (6%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH--KAV 231
R ++ +N +K + + RA LF EM ++P+ +T +L + S ++V
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW--RVDTVAFSALIK 289
+ F + E D + +++ +YA++G VD A ++++ W D ++++ +I
Sbjct: 371 QGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFN------WLPNTDVISWNTIIS 423
Query: 290 MYGMSGNYDACLSVYSDMKVLG-AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
Y +G + +Y+ M+ G N T+ ++L A +A R ++ ++KNG
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
+ +L Y + EDALS++ ++ V+ V +N L G+ ++A+ +
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPR----VNSVPWNTLIACHGFHGHGEKAVML 539
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRC--GFEPNILALTSLVHL 466
F +M G +PD+ T+ +L++ S G V E + EM++ G P++ +V +
Sbjct: 540 FKEMLDEG-VKPDHITFVTLLSACSHSGLVDEGQWCF-EMMQTDYGITPSLKHYGCMVDM 597
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
YG+A + + +K + + PD LL +LGKI +
Sbjct: 598 YGRAGQLETALKFIK---SMSLQPDASIWGALLSACRVHGNVDLGKIAS 643
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 146/343 (42%), Gaps = 36/343 (10%)
Query: 183 LKLFREIKDFGRAEKLFDEM---------------LQRGVKPNLITFS---------TLV 218
+ L+ K G A LFDEM Q G +T S T+V
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVV 251
Query: 219 ACASTCSVP---HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE 275
+ S C+ ++ V E + +S +I +YA G + ++DR
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 276 KWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDA 335
D ++++++IK Y ++ +S++ +M++ +P+ +T +L + + R
Sbjct: 312 ----DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 336 KTIYEEMVKNG-FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFD 394
+++ ++ G F + A++ Y + + A +V+ + + D + +N +
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP----NTDVISWNTIIS 423
Query: 395 MCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
A G A EA++++ M+ G+ + T+ S++ S G + + L +++ G
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDC 497
++ +TSL +YGK R +D + +F Q+ + P + C
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 141/318 (44%), Gaps = 57/318 (17%)
Query: 181 VTLKLFREIKDFGR---AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
V+ KL +FGR +K+FD M R +LI++++++ P +A+ F++M
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVR----DLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF-SALIKMYGMSGN 296
+PD S+ + +++G++ S+ + W ++ + +A++ MY G
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 297 YDACLSVYSDMKVLGAKPN--MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
D+ +V++ + PN ++++N TI +NGF+
Sbjct: 400 VDSARAVFNWL------PNTDVISWN----------------TIISGYAQNGFAS----- 432
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
+A+ +Y M+E+G+ ++ + + C+ G + MK+ +
Sbjct: 433 --------------EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
+G D F TSL +MY G++ +A +L ++ R N + +L+ +G
Sbjct: 479 KNG-LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV----NSVPWNTLIACHGFHGHG 533
Query: 474 DDVVKIFNQLLDLGISPD 491
+ V +F ++LD G+ PD
Sbjct: 534 EKAVMLFKEMLDEGVKPD 551
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 21/239 (8%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS-D 306
+SA ++ +Y +GNV +A +D + D A++ +I YG +GN + +S
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNR----DVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY--AALLQAYCRA 364
M G P+ T+ ++L A + D I+ +K GF W Y A+L+ Y R
Sbjct: 144 MLSSGLTPDYRTFPSVLKA---CRTVIDGNKIHCLALKFGFM--WDVYVAASLIHLYSRY 198
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
+ +A ++ EM + D +N + GNA EA+ + S+G D+ T
Sbjct: 199 KAVGNARILFDEMPVR----DMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVT 249
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
SL++ + G + + I+ G E + L+ LY + R D K+F+++
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 138/303 (45%), Gaps = 19/303 (6%)
Query: 139 ENVTEREAMIVLDNMVN-PETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEK 197
E++T A++V+ + ++A F + P V+ +N + + + A +
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWL-----PNTDVISWNTIISGYAQNGFASEAIE 436
Query: 198 LFDEMLQRG-VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
+++ M + G + N T+ +++ S + ++ ++ D + S+ +Y
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
+ G ++ ALSL+ + RV++V ++ LI +G G+ + + ++ +M G KP+
Sbjct: 497 GKCGRLEDALSLFYQIP----RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKN-GFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+T+ LL A + + + +E M + G +P+ Y ++ Y RA E AL K
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI-NMYSC 434
M + D ++ L C GN D KI ++ + +P++ Y L+ NMY+
Sbjct: 613 SMSLQ---PDASIWGALLSACRVHGNVDLG-KIASEHLF--EVEPEHVGYHVLLSNMYAS 666
Query: 435 MGK 437
GK
Sbjct: 667 AGK 669
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 117/291 (40%), Gaps = 33/291 (11%)
Query: 202 MLQRGVKPNLITF-STLVACAST-------CSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
ML G+ P+ TF S L AC + C W D ++AS+I
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW-----------DVYVAASLI 192
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
++Y+R V A L+D D +++A+I Y SGN L++ + ++ +
Sbjct: 193 HLYSRYKAVGNARILFDEMPVR----DMGSWNAMISGYCQSGNAKEALTLSNGLRAM--- 245
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
+ VT +LL A A TI+ +K+G L+ Y D V
Sbjct: 246 -DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
+ M + D + +N + A+ +F +M+ S QPD T SL ++ S
Sbjct: 305 FDRMYVR----DLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILS 359
Query: 434 CMGKVTEAEALLNEMIRCG-FEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+G + ++ +R G F +I ++V +Y K D +FN L
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 165/395 (41%), Gaps = 46/395 (11%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK 208
+L V + + A ++F R VV +N + + + A +LFDE
Sbjct: 225 LLGGFVKKKKIVEARQFFDSM--NVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPV 278
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPS-------------------------FECE 243
++ T++ +V+ + +A E F+KMP F+
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 244 PDDNLSA--SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
P N+S +MI YA+ G + A +L+D+ + D V+++A+I Y SG+ L
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
++ M+ G + N ++++ L K ++ +VK G+ ALL Y
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPD 421
C+ E+A ++KEM GKD+ V +N + + G + A++ F MK G +PD
Sbjct: 455 CKCGSIEEANDLFKEM--AGKDI--VSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPD 509
Query: 422 NFTYTSLINMYSCMGKVTEAEALLNEMIR-CGFEPNILALTSLVHLYGKAKRADDVVKIF 480
+ T ++++ S G V + M + G PN +V L G+A +D
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA---H 566
Query: 481 NQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
N + ++ PD LL + EL + A
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 143/347 (41%), Gaps = 28/347 (8%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVK 208
+L V E +A E F + P R+V +N + + + A+ LFD+M +R
Sbjct: 318 MLAGYVQGERMEMAKELFD--VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR--- 372
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
+ ++++ ++A S +A+ F +M + + +S + A + +++ L
Sbjct: 373 -DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 269 YDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+ R + +AL+ MY G+ + ++ +M A ++V++N ++ R
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIAGYSR 487
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS------VYKEMKEKGK 382
A +E M + G P+ T A+L A CS L Y ++ G
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSA-----CSHTGLVDKGRQYFYTMTQDYGV 542
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
+ Y + D+ G ++A + +M +PD + +L+ G AE
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMP----FEPDAAIWGTLLGASRVHGNTELAE 598
Query: 443 ALLNEMIRCGFEPNILALTSLV-HLYGKAKRADDVVKIFNQLLDLGI 488
+++ EP + L+ +LY + R DV K+ ++ D G+
Sbjct: 599 TAADKIF--AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 164/351 (46%), Gaps = 44/351 (12%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R +V +NV +K + ++ G+A +LF+ M +R V +++T+++ + A
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDDAR 177
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
F++MP E +D +++ Y + ++ A L+ E W + V+++ L+ +
Sbjct: 178 SVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFK--SRENWAL--VSWNCLLGGF 229
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM-VKNGFSPN 350
+ M V ++V++N ++ ++ + +A+ +++E V++ F
Sbjct: 230 VKKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF--- 282
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
T+ A++ Y + R E+A ++ +M E+ ++V +N + + A ++F
Sbjct: 283 --TWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF- 335
Query: 411 DMKSSGDCQP--DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
D P + T+ ++I Y+ GK++EA+ L ++M + + ++ +++ Y
Sbjct: 336 ------DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYS 385
Query: 469 KAKRADDVVKIFNQLLDLG-----ISPDDRFCDCLLYVATQIPRQELGKIT 514
++ + + +++F Q+ G S C VA ++ +Q G++
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 140/288 (48%), Gaps = 12/288 (4%)
Query: 207 VKPNLITFSTLVACASTCSVPH--KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDM 264
+K + +T +TL++ A+ K V+ + SFE D L+++++ +YA+ G++
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE--SDIVLASTVMDMYAKCGSIVD 428
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A ++D + EK D + ++ L+ Y SG L ++ M++ G PN++T+N ++
Sbjct: 429 AKKVFD-STVEK---DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
++ R + +AK ++ +M +G PN ++ ++ + CSE+A+ ++M+E G
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
+ + CAH + I + + TSL++MY+ G + +AE +
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+ P A+ S LYG K A + ++ L +G+ PD+
Sbjct: 605 FGSKLYSEL-PLSNAMISAYALYGNLKEA---IALYRSLEGVGLKPDN 648
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 148/320 (46%), Gaps = 9/320 (2%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R+ V +N + + + A +LF +M ++GV+P +T ST ++ ++ +
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ E D+ L S++ Y ++G ++ A ++DR + D V ++ +I Y
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGY 350
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G + + + M++ K + VT L+ A R + + K + +++ F +
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
+ ++ Y + DA V+ EK D +L+N L A G + EA+++F
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
M+ G P+ T+ +I G+V EA+ + +M G PN+++ T++++ +
Sbjct: 467 MQLEG-VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 472 RADDVVKIFNQLLDLGISPD 491
+++ + ++ + G+ P+
Sbjct: 526 CSEEAILFLRKMQESGLRPN 545
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
+++S+ +Y + G +D A ++D + VA++AL+ Y +G + + ++SDM
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
+ G +P VT + L A + K + + NG + +LL YC+
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
E A V+ M EK D V +N++ G ++A+ + M+ + D T +
Sbjct: 326 EYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLAT 380
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
L++ + + + + IR FE +I+ ++++ +Y K D K+F+ ++
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE 438
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 143/319 (44%), Gaps = 20/319 (6%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
+ ++L+N L + E G A +LF M GV PN+IT++ ++ +A +
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDM 498
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVD----TVAFSALIK 289
F +M S P+ +M+ + G + A+ + + R + TVA SA
Sbjct: 499 FLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Query: 290 MYGMSGNYDACLSVYSDMK---VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+ + + +++ ++ + ++V + +A++ +K +Y E+
Sbjct: 559 LASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK-LYSEL---- 613
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
P A++ AY ++A+++Y+ ++ G D + + C H G+ ++A+
Sbjct: 614 -----PLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
+IF D+ S +P Y ++++ + G+ +A L+ EM F+P+ + SLV
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PFKPDARMIQSLVAS 725
Query: 467 YGKAKRADDVVKIFNQLLD 485
K ++ + V + +LL+
Sbjct: 726 CNKQRKTELVDYLSRKLLE 744
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
++ + ++ YA+ +++A L+ + + + +++A+I + G + L +
Sbjct: 106 NEYIETKLVIFYAKCDALEIAEVLFSKLRVR----NVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+M P+ N+ A G K +R + ++ +VK+G ++L Y +
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
+DA V+ E+ ++ + V +N L G +EA+++F+DM+ G +P T
Sbjct: 222 GVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG-VEPTRVT 276
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
++ ++ + MG V E + I G E + + TSL++ Y K + +F+++
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 485 D 485
+
Sbjct: 337 E 337
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 168/398 (42%), Gaps = 57/398 (14%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R+V +N + + D A LF+E+ V N +T+ ++ KA
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAR 164
Query: 232 EWFEKMPS---------------------------FECEPDDN--LSASMIYVYARIGNV 262
E FE+MP FE P+ N + + M+ Y RIG+V
Sbjct: 165 ELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDV 224
Query: 263 DMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL 322
A +++ R D V ++ LI Y +G D + + +M+ G +P+ VT +++
Sbjct: 225 HEARAIFYRVFAR----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 323 LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
L A ++ R + ++ + G N AL+ Y + E+A SV++ + +
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR-- 338
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
N + A G EA+++F+ M+S D +PD T+ +++ G + E
Sbjct: 339 --SVACCNSMISCLAIHGKGKEALEMFSTMESL-DLKPDEITFIAVLTACVHGGFLMEGL 395
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL--- 499
+ +EM +PN+ L+HL G++ + + ++ + + + P+D LL
Sbjct: 396 KIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE---MHVKPNDTVLGALLGAC 452
Query: 500 --YVATQIPRQELGKITACIEKAKPKLGSVVRYLTEEH 535
++ T++ Q + IE A GS+ +E H
Sbjct: 453 KVHMDTEMAEQ----VMKIIETA----GSITNSYSENH 482
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 134/326 (41%), Gaps = 41/326 (12%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P ++ ++++ + + I D A +F + R +L+ ++TL+A + A+
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLIAGYAQNGYSDDAI 259
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ F M EPD +S++ A+ G +D+ ++ ++ +ALI MY
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 292 GMSGNYD---------------------ACLSV----------YSDMKVLGAKPNMVTYN 320
G+ + +CL++ +S M+ L KP+ +T+
Sbjct: 320 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI 379
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
+L A + I+ EM PN + L+ R+ ++A + KEM K
Sbjct: 380 AVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 381 GKDVDKVLYNMLFDMCAHFGN--ADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
D VL +L H A++ MKI S + +N S+ N+Y+ +
Sbjct: 440 PNDT--VLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENH-LASISNLYAHTERW 496
Query: 439 TEAEALLNEMIRCGFEPNILALTSLV 464
AEAL EM + G E + L+SLV
Sbjct: 497 QTAEALRVEMEKRGLEKS-PGLSSLV 521
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 184 KLFREIKDFGR---AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSF 240
KL + + GR A+ +F + + G +P+LI+++TL+A +
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT------------------ 91
Query: 241 ECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
V + G++ +S +++ T ++D++ F+A+I + SGN +
Sbjct: 92 --------------VQKQYGSISSIVSEVEQSGT---KLDSIFFNAVINAFSESGNMEDA 134
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG---FSPNWPTYAAL 357
+ MK LG P TYN L+ G A + + + + M++ G PN T+ L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA-MKIFADMKSSG 416
+QA+C+ + E+A V K+M+E G D V YN + G A ++ M
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+P+ T ++ Y G+V + + M E N++ SL++ + + D +
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 477 VKIFNQLL 484
++ LL
Sbjct: 315 DEVTLTLL 322
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 149/390 (38%), Gaps = 67/390 (17%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
++ Y L K +G + E+ Q G K + I F+ ++ S AV+
Sbjct: 80 LISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALL 139
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT----VAFSALIKMY 291
KM P + ++I Y G + + L D E+ VD F+ L++ +
Sbjct: 140 KMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD-LMLEEGNVDVGPNIRTFNVLVQAW 198
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA-MGRAKRARDAKTIYEEMV-KNGFSP 349
+ V M+ G +P+ VTYN + + + + R + E+MV K P
Sbjct: 199 CKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF---------- 399
N T ++ YCR D L + MKE + + V++N L +
Sbjct: 259 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVT 318
Query: 400 ---------------GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEAL 444
GN +++ MK + + D TY++++N +S G + +A +
Sbjct: 319 LTLLLMSFNEEVELVGNQKMKVQVLTLMKEC-NVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 445 LNEMIRCGFEPNILALTSLVHLYGKAKR-------------------------------- 472
EM++ G +P+ A + L Y +AK
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSN 437
Query: 473 --ADDVVKIFNQLLDLGISPDDRFCDCLLY 500
DD +++FN++ G+SP+ + + L++
Sbjct: 438 GSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 144/336 (42%), Gaps = 29/336 (8%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC-ASTCSVPHKAVEW 233
++ +NV ++ + + K A ++ +M + GV+P+ +T++T+ C E
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 234 FEKMPSFE-CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY- 291
EKM E +P+ ++ Y R G V L R K + + V F++LI +
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 292 ------------------------GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
+ GN + V + MK K +++TY+ ++ A
Sbjct: 307 EVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWS 366
Query: 328 RAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV 387
A A +++EMVK G P+ Y+ L + Y RA+ + A + + + + + +
Sbjct: 367 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVI 426
Query: 388 LYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
++ C++ G+ D+AM++F M G P+ T+ +L+ Y + + +AE +L
Sbjct: 427 FTTVISGWCSN-GSMDDAMRVFNKMCKFG-VSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
M CG +P L + A D+ K N L
Sbjct: 485 MRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 520
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAY 361
+V+ + G +P++++Y LL AM K+ +I E+ ++G + + A++ A+
Sbjct: 66 TVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAF 125
Query: 362 CRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG--DCQ 419
+ EDA+ +MKE G + YN L G + + ++ M G D
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDV 476
P+ T+ L+ + KV EA ++ +M CG P+ + ++ Y G+ RA+
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 477 VKIFNQLLDLGISPDDRFCDCLL 499
V + ++ P+ R C ++
Sbjct: 246 V-VEKMVMKEKAKPNGRTCGIVV 267
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 178/401 (44%), Gaps = 68/401 (16%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
+ +N+ + + DF + LF +M+ GV+ + TFS C S ++V E+
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS----CVSKSFSSLRSVHGGEQ 216
Query: 237 MPSFECEPD----DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+ F + +++ S++ Y + VD A ++D TE+ D ++++++I Y
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TER---DVISWNSIINGYV 272
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTY--------NNLLYAMGRAKRA------------ 332
+G + LSV+ M V G + ++ T ++ L ++GRA +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 333 ---------------RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
AK ++ EM +Y +++ Y R + +A+ +++EM
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGK 437
+E+G D + + CA + DE ++ +K + D D F +L++MY+ G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGS 447
Query: 438 VTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG-ISPDDRFCD 496
+ EAE + +EM +I++ +++ Y K A++ + +FN LL+ SPD+R
Sbjct: 448 MQEAELVFSEM----RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 497 CLLYVATQIPRQELGKITACIEKAKPKLGSVVR--YLTEEH 535
C+L + + +K + G ++R Y ++ H
Sbjct: 504 CVLPACASL---------SAFDKGREIHGYIMRNGYFSDRH 535
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 139/303 (45%), Gaps = 14/303 (4%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N L ++ + D A+ +F EM R V +++++++A + + +AV+ FE+M
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
PD +++ AR +D +++ K D +AL+ MY G+
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG-FSPNWPTYAALL 358
V+S+M+V +++++N ++ + A +A +++ +++ FSP+ T A +L
Sbjct: 451 AELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
A + ++ + G D+ + N L DM A G A +F D+ S
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS---- 562
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
D ++T +I Y G EA AL N+M + G E + ++ SL++ + D+ +
Sbjct: 563 -KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 479 IFN 481
FN
Sbjct: 622 FFN 624
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 180/446 (40%), Gaps = 79/446 (17%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFK 167
T S + K SL S + EQ +L G GE N V +L+AF
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER-----------NSVG--NSLVAFYLKN 243
Query: 168 QKIKPARHV---------VLYNVTLKLFREIKDFGRAEK---LFDEMLQRGVKPNLITF- 214
Q++ AR V + +N + + G AEK +F +ML G++ +L T
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGY---VSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 215 STLVACASTCSVP-HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
S CA + + +AV F E D +++ +Y++ G++D A +++ R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSRE--DRFCNTLLDMYSKCGDLDSAKAVF-REM 357
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRAR 333
+++ V+++++I Y G + ++ +M+ G P++ T +L R +
Sbjct: 358 SDR---SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 334 DAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF 393
+ K ++E + +N + AL+ Y + ++A V+ EM+ K D + +N +
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTII 470
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTY---------------------------- 425
+ A+EA+ +F + PD T
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 426 -------TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
SL++MY+ G + A L +++ ++++ T ++ YG + +
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLFDDIA----SKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 479 IFNQLLDLGISPDDRFCDCLLYVATQ 504
+FNQ+ GI D+ LLY +
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSH 612
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
+K +D K + + NGF + + L Y ++A V+ E+K ++K L
Sbjct: 107 SKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK-----IEKAL 161
Query: 389 Y-NMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNE 447
+ N+L + A G+ ++ +F M SSG + D++T++ + +S + V E L
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 448 MIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+++ GF SLV Y K +R D K+F+++ +
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 151/312 (48%), Gaps = 9/312 (2%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R V +N + F + + +A +LF M G +PN ++ + ++ S +
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK 228
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
E K E D+ ++++++ +Y + +++A ++ + R VA++++IK Y
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP----RKSLVAWNSMIKGY 284
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G+ +C+ + + M + G +P+ T ++L A R++ K I+ ++++ + +
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI 344
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
+L+ Y + + A +V+ + + KDV + +N++ GN +A++++
Sbjct: 345 YVNCSLIDLYFKCGEANLAETVFSKTQ---KDVAES-WNVMISSYISVGNWFKAVEVYDQ 400
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
M S G +PD T+TS++ S + + + + + + E + L L++L+ +Y K
Sbjct: 401 MVSVG-VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 472 RADDVVKIFNQL 483
+ +IFN +
Sbjct: 460 NEKEAFRIFNSI 471
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 55/352 (15%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-STLVA 219
+A E F++ P + +V +N +K + D ++ + M+ G +P+ T S L+A
Sbjct: 261 VAREVFQKM--PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK---TEK 276
C+ + ++ H + S D ++ S+I +Y + G ++A +++ + + E
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSV-VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
W V +I Y GN+ + VY M +G KP++VT+ ++L
Sbjct: 378 WNV-------MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL------------- 417
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
P AAL E ++ + E + D++L + L DM
Sbjct: 418 ------------PACSQLAAL----------EKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
+ GN EA +IF + + D ++T +I+ Y G+ EA +EM + G +P+
Sbjct: 456 SKCGNEKEAFRIFNSIP-----KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLD-LGISPDDRFCDCLLYVATQIPR 507
+ L +++ G A D+ +K F+Q+ GI P C++ + + R
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGR 562
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+NV + + + ++ +A +++D+M+ GVKP+++TF++++ S + K + +
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
E D+ L ++++ +Y++ GN A +++ + D V+++ +I YG G
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQPR 493
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM-VKNGFSPNWPTYAAL 357
L + +M+ G KP+ VT +L A G A + + +M K G P Y+ +
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA-HFGNA--DEAMKIFADMKS 414
+ RA +A + ++ E + + L + LF C H ++ D ++ +
Sbjct: 554 IDILGRAGRLLEAYEIIQQTPETSDNAE--LLSTLFSACCLHLEHSLGDRIARLLVE--- 608
Query: 415 SGDCQPDNFTYTSLINMYS 433
+ D TY L N+Y+
Sbjct: 609 --NYPDDASTYMVLFNLYA 625
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 177/444 (39%), Gaps = 74/444 (16%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
R VVL + ++ KD A +F+ ++ ++ +++L++ S S+ H +E
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENF---DIRSDVYIWNSLMSGYSKNSMFHDTLEV 93
Query: 234 FEKMPSFE-CEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
F+++ + C PD ++I Y +G + ++ + D V S+L+ MY
Sbjct: 94 FKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYA 153
Query: 293 -------------------------------MSGNYDACLSVYSDMKVLGAKPNMVTYNN 321
SG + L ++ M+ G +PN V+
Sbjct: 154 KFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTV 213
Query: 322 LLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
+ A R K I+ + VK GF + +AL+ Y + C E A V+++M K
Sbjct: 214 AISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK- 272
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
V +N + G++ ++I M G +P T TS++ S +
Sbjct: 273 ---SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMACSRSRNLLHG 328
Query: 442 EALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDV---------------------- 476
+ + +IR +I SL+ LY G+A A+ V
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Query: 477 ------VKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK-ITACIEKAKPKLGS-VV 528
V++++Q++ +G+ PD +L +Q+ E GK I I +++ + ++
Sbjct: 389 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 529 RYLTEEHEGDGDFRKEALELFNSI 552
L + + G+ KEA +FNSI
Sbjct: 449 SALLDMYSKCGN-EKEAFRIFNSI 471
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 14/319 (4%)
Query: 174 RH-VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE 232
RH +V+ N L ++ + A K+F++M QR + +T++TL++ S P A+
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALL 147
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+F +M F P++ +S+I A L+ + + SAL+ +Y
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G D V+ ++ N V++N L+ R A +++ M+++GF P+
Sbjct: 208 RYGLMDDAQLVFDALE----SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHF 263
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
+YA+L A E V+ M + G+ + N L DM A G+ +A KIF +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
+ D ++ SL+ Y+ G EA EM R G PN ++ S++ +
Sbjct: 324 -----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 473 ADDVVKIFNQLLDLGISPD 491
D+ + + GI P+
Sbjct: 379 LDEGWHYYELMKKDGIVPE 397
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 44/306 (14%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
YN LK K + + +LQ + +++ +TL+ + C +A + FEKM
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
P + D V ++ LI Y
Sbjct: 122 P---------------------------------------QRDFVTWTTLISGYSQHDRP 142
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
L ++ M G PN T ++++ A +R ++ VK GF N +AL
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL 202
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
L Y R +DA V+ ++ + + V +N L A ++A+++F M G
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDG- 257
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVV 477
+P +F+Y SL S G + + + + MI+ G + A +L+ +Y K+ D
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 478 KIFNQL 483
KIF++L
Sbjct: 318 KIFDRL 323
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 137/305 (44%), Gaps = 29/305 (9%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A+ +FD + R N ++++ L+A + S KA+E F+ M P AS+
Sbjct: 215 AQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
+ G ++ ++ ++ A + L+ MY SG+ ++ + AK
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL----AKR 326
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++V++N+LL A + ++A +EEM + G PN ++ ++L A + ++ Y
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+ MK+ G + Y + D+ G+ + A++ +M +P + +L+N +C
Sbjct: 387 ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP----IEPTAAIWKALLN--AC 440
Query: 435 -MGKVTEAEALLNEMIRCGFE-------PNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
M K TE A E + FE P+++ L ++Y R +D ++ ++ +
Sbjct: 441 RMHKNTELGAYAAEHV---FELDPDDPGPHVI----LYNIYASGGRWNDAARVRKKMKES 493
Query: 487 GISPD 491
G+ +
Sbjct: 494 GVKKE 498
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 8/269 (2%)
Query: 193 GRAE---KLFDEMLQRGVKPNLITFSTLVAC-ASTCSVPHKAVEWFEKMPSFECEPDDNL 248
GR+E KL EM GV+P+ T + + C A C A++ +KM + EP
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFV-GALDLLKKMRFYGFEPWIKH 546
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
+ ++ G A D E + VA +A I + D L ++ D+
Sbjct: 547 TTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDIC 606
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
G P+++ Y+ L+ A+ +A R +A ++ EMV G P TY +++ +C+ +
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 369 DALSVYKEMKEKGKDVDKVLY-NMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
LS M E K+ D + Y +++ +CA G EA+ + +MK DC P+ T+ +
Sbjct: 667 RGLSCIVRMYEDEKNPDVITYTSLIHGLCAS-GRPSEAIFRWNEMKGK-DCYPNRITFMA 724
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPN 456
LI G EA EM EP+
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPD 753
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D+++S ++ + + G VD A L + + R++ + LI + D ++
Sbjct: 247 DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR- 363
M+ +G ++ Y+ L+ + + K A ++Y E+ ++G P+ LL ++
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Query: 364 ---ARCSE---------DALSVYKEMKEK--GKDVDKVLYNMLFDMCAHF--GNADEAMK 407
+R +E + +YK + E D+ Y+ + ++ ++ E +K
Sbjct: 367 SELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVK 426
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+ D + PD+ + + +IN KV A LL+++++ G P + +++
Sbjct: 427 LLKDHNKA--ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGM 484
Query: 468 GKAKRADDVVKIFNQLLDLGISPDDRFCDCL 498
K R+++ +K+ ++ D G+ P +C+
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 189 IKDFG--RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
IK+ G R +LF ++ G P++I + L+ +A F +M S +P
Sbjct: 590 IKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTV 649
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
SMI + + G +D LS R ++ D + +++LI SG + +++
Sbjct: 650 ATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
MK PN +T+ L+ + + + +A + EM + P+ Y +L+ ++ +
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSEN 769
Query: 367 SEDALSVYKEMKEKGK 382
+++EM KG+
Sbjct: 770 INAGFGIFREMVHKGR 785
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 9/233 (3%)
Query: 272 AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV--TYNNLLYAMGRA 329
+K E +R D A++A+ + + + ++ D VL ++ M + + +G A
Sbjct: 97 SKQEGYRNDMYAYNAMASILSRARQNASLKALVVD--VLNSRCFMSPGAFGFFIRCLGNA 154
Query: 330 KRARDAKTIYEEMVKNGFS-PNWPTYAALLQAYCRARCSEDAL--SVYKEMKEKGKDVDK 386
+A ++++ + + G PN TY LL+A ++ S L + KEM++ G DK
Sbjct: 155 GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDK 214
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
+ + + G ++ A+ +F ++ S G D T L+ + G+V +A L+
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRG--WLDEHISTILVVSFCKWGQVDKAFELIE 272
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ N L+H + K R D ++F ++ +G++ D D L+
Sbjct: 273 MLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLI 325
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 147/355 (41%), Gaps = 57/355 (16%)
Query: 192 FGRAEKLFD--EMLQ-RGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNL 248
+G+ +K F+ EML+ R ++ N T+ L+ S KA + FEKM D L
Sbjct: 261 WGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIAL 320
Query: 249 SASMIYVYARIGNVDMALSLY----------DRA-----------KTEKWRVDTVA---- 283
+I + +++MALSLY DR ++E R+ V
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDI 380
Query: 284 ------------FSALIK----------MYGMSGNYDACLSVYSDMKVL-----GAKPNM 316
F I+ + + GNY++ V +K+L P+
Sbjct: 381 DKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYES-DGVSEIVKLLKDHNKAILPDS 439
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
+ + ++ + +A + A T+ ++V+NG P Y +++ C+ SE++L + E
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
MK+ G + + N ++ A + A+ + M+ G +P T L+ G
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYG-FEPWIKHTTFLVKKLCENG 558
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ +A L+++ GF +++A T+ + K + D +++F + G PD
Sbjct: 559 RAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 137/319 (42%), Gaps = 48/319 (15%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPN-LITFSTLVACASTCSVPHKA 230
P +VV + + F F A + F EM GVK N I LVAC +
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG- 227
Query: 231 VEWFEKM-------PSFECEPDDN--LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+WF P F+ + N L+ S+I +YA+ G++ A L+D
Sbjct: 228 -KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT----L 282
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
V+++++I Y +G+ + L ++ DM LG P+ VT+ +++ A ++ ++I+
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 342
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSE-------------------------------DA 370
+ K GF + AL+ Y + +E +A
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 371 LSVYKEMKEKGKDV-DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
LS+++ M+EKG D + Y + C+H G +E + FA+M+ +P Y ++
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV 462
Query: 430 NMYSCMGKVTEAEALLNEM 448
++ S G+ EAE L+ M
Sbjct: 463 DILSRAGRFEEAERLVKTM 481
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 170/397 (42%), Gaps = 32/397 (8%)
Query: 100 LLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKG-LGENVTEREAMIVLDNMVNPET 158
++KK Y S LE +SL N Q+ +++K + NV +I PET
Sbjct: 1 MMKKHYKPILSQLEN-CRSLVELN----QLHGLMIKSSVIRNVIPLSRLIDFCTTC-PET 54
Query: 159 ALLAF--EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFS- 215
L++ F+ P+ V ++N ++ + + +A + EML++G P+ TF
Sbjct: 55 MNLSYARSVFESIDCPS--VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 216 TLVACASTCSVPHKA-VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
L AC+ + + V F FE + +S ++++Y G V+ L +++
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEV--NMYVSTCLLHMYMCCGEVNYGLRVFE--DI 168
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
+W V VA+ +LI + + + + + +M+ G K N +LL A GR K
Sbjct: 169 PQWNV--VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVT 226
Query: 335 AKTIYEEMVKNGFSP--------NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
K + + GF P N +L+ Y + A ++ M E+
Sbjct: 227 GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TL 282
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
V +N + + G+A+EA+ +F DM G PD T+ S+I G +++
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDMLDLG-IAPDKVTFLSVIRASMIQGCSQLGQSIHA 341
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+ + GF + + +LV++Y K A+ K F L
Sbjct: 342 YVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL 378
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 10/213 (4%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA--STCSVPHK 229
P R +V +N + + + D A +F +ML G+ P+ +TF +++ + CS +
Sbjct: 278 PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQ 337
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
++ + F D + +++ +YA+ G+ + A ++ + + DT+A++ +I
Sbjct: 338 SIHAYVSKTGF--VKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK----DTIAWTVVII 391
Query: 290 MYGMSGNYDACLSVYSDMKVLG-AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK-NGF 347
G+ + LS++ M+ G A P+ +TY +LYA + + + EM +G
Sbjct: 392 GLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGL 451
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
P Y ++ RA E+A + K M K
Sbjct: 452 EPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 10/364 (2%)
Query: 130 SEMLVKGLGENVTEREAMI-VLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFRE 188
S+M+ KG+ NV MI N + AL F +R+V Y + F +
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 189 IKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNL 248
+A L ML G+ P+ IT+ L+ C A+ + + C +
Sbjct: 391 KGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP- 449
Query: 249 SASMIYVYARIGNVDMAL-SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
V +GN+++ + SL + + V + + NY A LS M
Sbjct: 450 ------VIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
LG P +YN+++ + + D ++ + + F P+ TY ++ C+
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+ A ++ M+E G +Y+ + G EA + FA M SG QPD Y
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG-IQPDEIAYMI 622
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+IN Y+ G++ EA L+ E+++ P+ T L+ + K + + +++L+ G
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 488 ISPD 491
+SP+
Sbjct: 683 LSPN 686
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 157/387 (40%), Gaps = 32/387 (8%)
Query: 102 KKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALL 161
+++Y A S +EK+ C P + ++ EN+ E A +V N++
Sbjct: 490 QRNYIAALSRIEKMVNL--GCTPLPFSYNSVIKCLFQENIIEDLASLV--NII------- 538
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
Q++ V Y + + + D A + D M + G++P + +S+++
Sbjct: 539 ------QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSL 592
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+A E F KM +PD+ MI YAR G +D A L + R +
Sbjct: 593 GKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS 652
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
++ LI + G + M G PN+V Y L+ + + + T++
Sbjct: 653 FTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGL 712
Query: 342 MVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF-------- 393
M +N + Y LL RA + V + E GK +K+L ++
Sbjct: 713 MGENDIKHDHIAYITLLSGLWRAMARKKKRQV---IVEPGK--EKLLQRLIRTKPLVSIP 767
Query: 394 DMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF 453
++G+ AM++ +K S P+ + + ++I Y G++ EA L M + G
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKS--IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGI 825
Query: 454 EPNILALTSLVHLYGKAKRADDVVKIF 480
PN++ T L+ + +A + + +F
Sbjct: 826 VPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
NL S+ Y + + G A +L+D + + + VD V ++ L+K Y N + +Y
Sbjct: 238 NLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLR 297
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
M + + +N L++ + + ++ +M+K G N TY ++ +YC+
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE-- 355
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
GN D A+++F + S D + YT
Sbjct: 356 ---------------------------------GNVDYALRLFVNNTGSEDISRNVHCYT 382
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD- 485
+LI + G + +A LL M+ G P+ + L+ + K + I +LD
Sbjct: 383 NLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDN 442
Query: 486 -LGISP 490
GI+P
Sbjct: 443 GCGINP 448
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 31/346 (8%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V+Y +K + + + A +L+ M++R + + F+TL+ + K F +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLY-DRAKTEKWRVDTVAFSALIKMYGMSG 295
M + + MI Y + GNVD AL L+ + +E + ++ LI + G
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT-- 353
D + + M G P+ +TY LL + + + A I + ++ NG N P
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 354 ---------------------------YAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
A + A C R ALS ++M G
Sbjct: 453 DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
YN + C N E + ++ D PD TY ++N A A+++
Sbjct: 513 FSYNSVIK-CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
M G P + +S++ GK R + + F ++L+ GI PD+
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDE 617
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
P+ L ++I Y G +D A + + + E + V ++ L+K + +G+ ++ + +
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ +P+ V Y+ LL + KR DA + EM K+G +PN +Y LLQ C
Sbjct: 852 FEGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+R + +A+ V K+M + + L + EA +FA M SG
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 2/253 (0%)
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTE-KWRVDTVAFSALIKMYGMSGNYD 298
F C + + S I Y R +D AL +D K + + ++ ++ Y SG+ D
Sbjct: 151 FSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMD 210
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
L Y M AKP++ T+N L+ R+ + A ++ EM + G PN ++ L+
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ + + E+ + + EM E G + +L D G D+A + D+ +
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK-RV 329
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
P F Y SL+ K A ++ E+ + G P +A T+LV K+ R +
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 479 IFNQLLDLGISPD 491
++++ GI PD
Sbjct: 390 FMEKMMNAGILPD 402
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 5/308 (1%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV 218
ALLAF+ K+ I +V +YN + + + D +A + + M + KP++ TF+ L+
Sbjct: 176 ALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILI 235
Query: 219 ACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWR 278
S A++ F +M CEP+ ++I + G ++ + + R
Sbjct: 236 NGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR 295
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
L+ G D + D+ P+ Y +L+ + +A A +
Sbjct: 296 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLF-DMCA 397
EE+ K G +P + L++ ++ +E A ++M G D V +N+L D+C+
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCS 415
Query: 398 HFGNAD-EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
+ D +++ A SS +PD TY L++ ++ G+ E E L+NEM+ P+
Sbjct: 416 SDHSTDANRLRLLA---SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472
Query: 457 ILALTSLV 464
I L+
Sbjct: 473 IFTYNRLM 480
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 11/316 (3%)
Query: 185 LFREIKD-FGRAEKL------FDEMLQRGV--KPNLITFSTLVACASTCSVPHKAVEWFE 235
+FR D + RA K+ FD M +R + KPN+ ++T+V KA+ +++
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM-KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M +PD +I Y R D+AL L+ K + + V+F+ LI+ + SG
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ + + +M LG + + T L+ + R R DA + +++ P+ Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+L++ C + A+ + +E+ +KG+ + L + G ++A M ++
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G PD+ T+ L+ T+A L G+EP+ LV + K R +
Sbjct: 398 G-ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 476 VVKIFNQLLDLGISPD 491
+ N++LD + PD
Sbjct: 457 GEVLVNEMLDKDMLPD 472
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 3/277 (1%)
Query: 167 KQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSV 226
K++ KP V +N+ + + F A LF EM ++G +PN+++F+TL+ +
Sbjct: 221 KERAKP--DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
+ V+ +M C + ++ R G VD A L ++ + +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
L++ + + ++ G P + L+ + ++ R A E+M+ G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
P+ T+ LL+ C + S DA + KG + D+ Y++L G E
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+ +M D PD FTY L++ SC GK + +
Sbjct: 459 VLVNEMLDK-DMLPDIFTYNRLMDGLSCTGKFSRKQV 494
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV-LYNMLFDMCAHFGNADEAMKIFA 410
P + + + AYCRAR + AL + MK V +YN + + G+ D+A++ +
Sbjct: 158 PIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
M +PD T+ LIN Y K A L EM G EPN+++ +L+ + +
Sbjct: 218 RMGKE-RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 471 KRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ ++ VK+ ++++LG + C+ L+
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILV 305
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 11/334 (3%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+A LF++M+Q G PNL+T+++L+ + +A K+ S PD L MI
Sbjct: 265 KAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMI 324
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+ Y R+G + A ++ + K D F++++ +SG +D + +G
Sbjct: 325 HTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG---IGTD 381
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
++VT N L + A + M F+ + TY L A CR A+ +
Sbjct: 382 FDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKM 441
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQP-DNFTYTSLINMY 432
YK + ++ K +D ++ + D G + A+ +F + + P D +YT I
Sbjct: 442 YKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK--RCILEKYPLDVVSYTVAIKGL 499
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS--P 490
++ EA +L +M G PN +++ K K + V KI + + G+ P
Sbjct: 500 VRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDP 559
Query: 491 DDRFCDCLLYVATQIPRQELGKITACIEKAKPKL 524
+ +F +Y R + + + EK K +
Sbjct: 560 NTKF---QVYSLLSRYRGDFSEFRSVFEKWKSEF 590
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 268 LYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMG 327
+ +R K + F L++++ YD + VY+ M G PN N ++
Sbjct: 95 IIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNF 154
Query: 328 RAKRARDAKTIYEEM-VKNGFSPNWPTYAALLQAYCRARCSEDALSV---YKEMKEKGKD 383
+ A I+E + +N FS + L +C D + V K M +G
Sbjct: 155 KLNVVNGALEIFEGIRFRNFFS-----FDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
++ + + +C G EA ++ M SG N ++ L++ + G+ +A
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVN-VWSMLVSGFFRSGEPQKAVD 268
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVAT 503
L N+MI+ G PN++ TSL+ + D+ + +++ G++PD C+ +++ T
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 504 QIPR-QELGKITACIEKAK 521
++ R +E K+ +EK K
Sbjct: 329 RLGRFEEARKVFTSLEKRK 347
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 119/269 (44%), Gaps = 6/269 (2%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
+IKP ++L L++F + +A +++ M G PN + ++ +V +
Sbjct: 105 EIKPRVFLLL----LEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVN 160
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
A+E FE + F +++ S G++ + R E + + F ++
Sbjct: 161 GALEIFEGI-RFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQIL 219
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
++ +G V M G ++ ++ L+ R+ + A ++ +M++ G S
Sbjct: 220 RLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCS 279
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
PN TY +L++ + ++A +V +++ +G D VL N++ G +EA K+
Sbjct: 280 PNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGK 437
F ++ PD +T+ S+++ GK
Sbjct: 340 FTSLEKR-KLVPDQYTFASILSSLCLSGK 367
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 161/365 (44%), Gaps = 29/365 (7%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +FDEM R V +T++T++ + +A + FE+M PD+ + +++
Sbjct: 165 ARNVFDEMSHRDV----VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
R GN+ ++Y+ R+DT +AL+ MY +G D + M V
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV----R 276
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N+ ++ + R DA+ I+++ K W T ++ AY + ++AL V+
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC-WTT---MISAYVESDYPQEALRVF 332
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+EM G D V + CA+ G D+A + + + +G + + +LINMY+
Sbjct: 333 EEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG-LESELSINNALINMYAK 391
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRF 494
G + + +M R N+++ +S+++ A D + +F ++ + P++
Sbjct: 392 CGGLDATRDVFEKMPR----RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 495 CDCLLYVATQIPRQELG-KITACIE---KAKPKL---GSVVRYLTEEHEGDGDFRKEALE 547
+LY + E G KI A + PKL G +V G + +EALE
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF-----GRANLLREALE 502
Query: 548 LFNSI 552
+ S+
Sbjct: 503 VIESM 507
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 194 RAEKLFDEMLQR-GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
RA LF + ++ G + + +F ++ S S + +E D +
Sbjct: 93 RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGF 152
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ +YA G ++ A +++D E D V ++ +I+ Y G D ++ +MK
Sbjct: 153 MDMYASCGRINYARNVFD----EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV 208
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
P+ + N++ A GR R + IYE +++N + AL+ Y A C + A
Sbjct: 209 MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE 268
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+++M + V + + + C G D+A IF + + D +T++I+ Y
Sbjct: 269 FFRKMSVRNLFVSTAMVSG-YSKC---GRLDDAQVIFDQTE-----KKDLVCWTTMISAY 319
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
EA + EM G +P+++++ S++
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA----CASTCSVPHKAVEW 233
LY+ ++ RE K F DE+LQ K + I V + A +
Sbjct: 89 LYSAFIRRLREAKKFS----TIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKL 144
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV--DTVAFSALIKMY 291
F++MP CE +++ Y +D A+ + + EK + D V ++ +IK
Sbjct: 145 FDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF-KELPEKLGITPDLVTYNTMIKAL 203
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G+ D LS++ +++ G +P+++++N LL R + + I++ M SPN
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
+Y + ++ R + DAL++ MK +G D YN L N +E MK + +
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNE 323
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
MK G PD TY LI + G + A + E I+
Sbjct: 324 MKEKG-LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 2/229 (0%)
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM-KVL 310
++ +Y G + A L+D +F+AL+ Y S D + + ++ + L
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G P++VTYN ++ A+ R D +I+EE+ KNGF P+ ++ LL+ + R +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
++ MK K + YN +A+ + MK+ G PD TY +LI
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG-ISPDVHTYNALIT 306
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
Y + E NEM G P+ + L+ L K D V++
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM-VKNGFS 348
+YG SG + ++ +M L + + ++N LL A +K+ +A ++E+ K G +
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P+ TY +++A CR +D LS+++E+++ G + D + +N L + E +I
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
+ D+ S + P+ +Y S + + K T+A L++ M G P++ +L+ Y
Sbjct: 251 W-DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 469 KAKRADDVVKIFNQLLDLGISPD 491
++V+K +N++ + G++PD
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPD 332
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST 216
+ A+ F+ +K+ +V YN +K +F+E+ + G +P+LI+F+T
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
L+ + + ++ M S P+ S + R AL+L D KTE
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG 293
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
D ++ALI Y + N + + Y++MK G P+ VTY L+ + + A
Sbjct: 294 ISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV 353
Query: 337 TIYEEMVKN 345
+ EE +K+
Sbjct: 354 EVSEEAIKH 362
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 19/323 (5%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACA 221
A +YF + +VVL+NV L + + D + ++F +M + PN T+ +++
Sbjct: 443 ALDYFLET--EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL--- 497
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSA----SMIYVYARIGNVDMALSLYDRAKTEKW 277
TC + +E E++ S + + L+A +I +YA++G +D A + R +
Sbjct: 498 KTC-IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-- 554
Query: 278 RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
D V+++ +I Y D L+ + M G + + V N + A + ++ +
Sbjct: 555 --DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
I+ + +GFS + P AL+ Y R E++ + E E G D + +N L
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF-EQTEAG---DNIAWNALVSGFQ 668
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
GN +EA+++F M G +NFT+ S + S + + + + + + G++
Sbjct: 669 QSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 458 LALTSLVHLYGKAKRADDVVKIF 480
+L+ +Y K D K F
Sbjct: 728 EVCNALISMYAKCGSISDAEKQF 750
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 159/372 (42%), Gaps = 18/372 (4%)
Query: 112 LEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIK 171
LE K+ S + + S++L GL N E + D + AF+ F +
Sbjct: 91 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL--FDFYLFKGDLYGAFKVFDEM-- 146
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R + +N +K G LF M+ V PN TFS ++ SV V
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 232 EWFEKMPSFECEPDDNLSAS-MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
E ++ D + + +I +Y+R G VD+A ++D + + D ++ A+I
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK----DHSSWVAMIS- 261
Query: 291 YGMSGNY--DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
G+S N + ++ DM VLG P ++++L A + + + ++ ++K GFS
Sbjct: 262 -GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
+ AL+ Y A ++ M ++ D V YN L + + G ++AM++
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMEL 376
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
F M G +PD+ T SL+ S G + + L + GF N +L++LY
Sbjct: 377 FKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 469 KAKRADDVVKIF 480
K + + F
Sbjct: 436 KCADIETALDYF 447
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 13/330 (3%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N + L+ + + AE +F M QR + +T++TL+ S C KA+E F++M
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
EPD N AS++ + G + L+ + + AL+ +Y + +
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
L + + +V N+V +N +L A G R++ I+ +M PN TY ++L+
Sbjct: 443 ALDYFLETEV----ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
R E ++ ++ + ++ + ++L DM A G D A I ++ +G
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAG--- 553
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
D ++T++I Y+ +A +M+ G + + LT+ V + + +I
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 480 FNQLLDLGISPDDRFCDCLLYVATQIPRQE 509
Q G S D F + L+ + ++ + E
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 141/331 (42%), Gaps = 29/331 (8%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWFEKMPSFEC----EPDDNL 248
+A F +ML RG++ + + + V ACA +A++ +++ + C D
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGL-----QALKEGQQIHAQACVSGFSSDLPF 628
Query: 249 SASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMK 308
+++ +Y+R G ++ + +++ + D +A++AL+ + SGN + L V+ M
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 309 VLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE 368
G N T+ + + A + K ++ + K G+ AL+ Y +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL 428
DA + E+ K ++V +N + + + G EA+ F M S + +P++ T +
Sbjct: 745 DAEKQFLEVSTK----NEVSWNAIINAYSKHGFGSEALDSFDQMIHS-NVRPNHVTLVGV 799
Query: 429 INMYSCMGKVTEAEALLNEM-IRCGFEP---NILALTSLVHLYGKAKRADDVVKIFNQLL 484
++ S +G V + A M G P + + + ++ G RA + ++
Sbjct: 800 LSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ------ 853
Query: 485 DLGISPDDRFCDCLLYVATQIPRQELGKITA 515
++ I PD LL E+G+ A
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 147/313 (46%), Gaps = 11/313 (3%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R +V ++ + E + +A ++F M+ GV+P+ +T ++V + A
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
++ + D+ L S++ +Y++ G++ + ++++ + + V+++A+I Y
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK----NAVSWTAMISSY 278
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
+ L +S+M G +PN+VT ++L + G R+ K+++ V+ PN+
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNY 338
Query: 352 PTYA-ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
+ + AL++ Y D +V + + ++ + V +N L + AH G +A+ +F
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDR----NIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
M + +PD FT S I+ G V + + +IR + SL+ +Y K+
Sbjct: 395 QMVTQ-RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLIDMYSKS 452
Query: 471 KRADDVVKIFNQL 483
D +FNQ+
Sbjct: 453 GSVDSASTVFNQI 465
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 157/372 (42%), Gaps = 76/372 (20%)
Query: 194 RAEKLFDEMLQRGVKPNLIT-FSTLVACASTCSVPH-KAVEWF----EKMPSFE------ 241
+A + F EM++ G++PNL+T +S L +C + K+V F E P++E
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 242 ------------CE------PDDNLSA--SMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
CE D N+ A S+I +YA G V AL L+ + T++ + D
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 282 VAFSA----------------------------------LIKMYGMSGNYDACLSVYSDM 307
++ LI MY SG+ D+ +V++ +
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQI 465
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
K ++VT+N++L + + +A ++++ M + N T+ A++QA
Sbjct: 466 K----HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
E V+ ++ G D L DM A G+ + A +F M S +++S
Sbjct: 522 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSR-----SIVSWSS 575
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+IN Y G++ A + N+M+ G +PN + +++ G + ++ FN + G
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Query: 488 ISPDDRFCDCLL 499
+SP+ C +
Sbjct: 636 VSPNSEHFACFI 647
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%)
Query: 115 LAKSLDSCN-----PTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQK 169
LA S+ +C P +Q+ +++ +V++ L +M + ++ + +
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIR---TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQ 464
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPH 228
IK R VV +N L F + + A LFD M ++ N +TF ++ AC+S S+
Sbjct: 465 IKH-RSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK 523
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+W D ++I +YA+ G+++ A +++ RA + + V++S++I
Sbjct: 524 G--KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVF-RAMSSR---SIVSWSSMI 577
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
YGM G + +S ++ M G KPN V + N+L A G + + K + M G S
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVS 637
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
PN +A + R S D Y+ +KE D ++ L + C D I
Sbjct: 638 PNSEHFACFIDLLSR---SGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAI 694
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
D+ S D YT L N+Y+ G+ E L + M
Sbjct: 695 KNDL--SDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 136/318 (42%), Gaps = 53/318 (16%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V+ L ++ + + AEK+FD M R +L+ +STLV+ KA+ F+
Sbjct: 137 VIETSLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M EPD S++ A +G + +A S++ + + + +D ++L+ MY G+
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
LL ++ I+E++ K N ++ A
Sbjct: 253 -------------------------LL----------SSERIFEKIAKK----NAVSWTA 273
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI--FADMKS 414
++ +Y R SE AL + EM + G + + V + C G E + FA +
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR- 332
Query: 415 SGDCQPDNFTYT-SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
+ P+ + + +L+ +Y+ GK+++ E +L R + NI+A SL+ LY
Sbjct: 333 --ELDPNYESLSLALVELYAECGKLSDCETVL----RVVSDRNIVAWNSLISLYAHRGMV 386
Query: 474 DDVVKIFNQLLDLGISPD 491
+ +F Q++ I PD
Sbjct: 387 IQALGLFRQMVTQRIKPD 404
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 161/347 (46%), Gaps = 18/347 (5%)
Query: 136 GLGENVTEREAMIVLDNMVNP-ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGR 194
GL ++ +I + +++ P ++AL F+ P R VV YNV + + ++ R
Sbjct: 147 GLLSDLFTLNTLIRVYSLIAPIDSALQLFDE-----NPQRDVVTYNVLIDGLVKAREIVR 201
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A +LFD M R +L+++++L++ + + +A++ F++M + +PD+ S +
Sbjct: 202 ARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
A+ G+ +++D K ++ +D+ + L+ Y G D + ++ L +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE----LCSDK 313
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ T+N ++ + + +MV +G P+ T+ ++L + ++A +++
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLF 373
Query: 375 KEMKEKGKDVDKVL--YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+M+ DV++ + Y + D+ G +EA ++ M G + ++ L+
Sbjct: 374 DQMRSL-YDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGC 432
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
G + AE N + E + +V +Y A+R ++VVK+
Sbjct: 433 RIHGNIEIAEKAANRVKALSPEDGGV-YKVMVEMYANAERWEEVVKV 478
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 17/295 (5%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWFE-KMPSFECEPDDNLSASM 252
+++ F EM +R V P+ TF + ACA+ + V+ + F D ++
Sbjct: 99 SKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTL 158
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I VY+ I +D AL L+D E + D V ++ LI + ++ M +
Sbjct: 159 IRVYSLIAPIDSALQLFD----ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPL--- 211
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
++V++N+L+ + R+A +++EMV G P+ + L A ++ + +
Sbjct: 212 -RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDN-FTYTSLINM 431
++ K K +D L L D A G D AM+IF C FT+ ++I
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE------LCSDKTLFTWNAMITG 324
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+ G +M+ G +P+ + S++ + D+ +F+Q+ L
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSL 379
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 139/316 (43%), Gaps = 16/316 (5%)
Query: 201 EMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIG 260
++L G N++ +++ + C A F++M D ++ ++I YA++G
Sbjct: 204 QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV----KDIHIWTTLISGYAKLG 259
Query: 261 NVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
+++ A L+ E + V+++ALI Y G+ + L ++ M LG KP T++
Sbjct: 260 DMEAAEKLF----CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
+ L A R K I+ M++ PN ++L+ Y ++ E + V++ +K
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK 375
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
D V +N + A G +A+++ DM QP+ T ++N S G V E
Sbjct: 376 H---DCVFWNTMISALAQHGLGHKALRMLDDMIKF-RVQPNRTTLVVILNACSHSGLVEE 431
Query: 441 AEALLNEM-IRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
M ++ G P+ L+ L G RA ++ ++ ++ PD + +L
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLG---RAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Query: 500 YVATQIPRQELGKITA 515
V +ELGK A
Sbjct: 489 GVCRIHGNEELGKKAA 504
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 125/284 (44%), Gaps = 17/284 (5%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
K+FD+M R NL +++ +V+ + +A F+ MP E D +M+ Y
Sbjct: 103 KVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWNTMVIGY 154
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
A+ GN+ AL Y + + + +F+ L+ S + + V G N+
Sbjct: 155 AQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNV 214
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
V +++ A + + AK ++EM W T L+ Y + E A ++ E
Sbjct: 215 VLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI-WTT---LISGYAKLGDMEAAEKLFCE 270
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M EK + V + L G+ + A+ +F M + G +P+ FT++S + + +
Sbjct: 271 MPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQFTFSSCLCASASIA 325
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
+ + + MIR PN + ++SL+ +Y K+ + ++F
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
Query: 194 RAEKLFDEMLQRGVKPNLITFST-LVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
RA LF +M+ GVKP TFS+ L A AS S+ H E M P+ + +S+
Sbjct: 294 RALDLFRKMIALGVKPEQFTFSSCLCASASIASLRH-GKEIHGYMIRTNVRPNAIVISSL 352
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I +Y++ G+++ + ++ + D V ++ +I G L + DM
Sbjct: 353 IDMYSKSGSLEASERVFRICDDKH---DCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEM-VKNGFSPNWPTYAALLQAYCRARCSEDAL 371
+PN T +L A + + +E M V++G P+ YA L+ RA C ++ +
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGN-------ADEAMKIFADMKSSGDCQPDNFT 424
++++E + DK ++N + +C GN ADE +K+ D +SS
Sbjct: 470 ---RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL--DPESSA-------P 517
Query: 425 YTSLINMYSCMGKVTEAEALLNEM 448
Y L ++Y+ GK E L M
Sbjct: 518 YILLSSIYADHGKWELVEKLRGVM 541
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 142/330 (43%), Gaps = 17/330 (5%)
Query: 148 IVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGV 207
I++ VN LA YF P ++ V + + + ++ D AE+LF M
Sbjct: 237 ILIGGYVNCREMKLARTYFDAM--PQKNGVSWITMISGYTKLGDVQSAEELFRLM----S 290
Query: 208 KPNLITFSTLVACASTCSVPHKAVEWFEKM--PSFECEPDDNLSASMIYVYARIGNVDMA 265
K + + + ++AC + P A++ F +M + +PD+ +S++ +++GN
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
+ ++D + ++LI +Y G++ ++S++ K + V+Y+ ++
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVSYSAMIMG 406
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
G A +A +++ M++ PN T+ LL AY + ++ + MK+ +
Sbjct: 407 CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPS 466
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALL 445
Y ++ DM G +EA ++ M QP+ + +L+ V E
Sbjct: 467 ADHYGIMVDMLGRAGRLEEAYELIKSMP----MQPNAGVWGALLLASGLHNNVEFGEIAC 522
Query: 446 NEMIRCGFEPNILALTSLVHLYGKAKRADD 475
+ ++ +P L+ L +Y R DD
Sbjct: 523 SHCVKLETDPTGY-LSHLAMIYSSVGRWDD 551
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P + V +N+ + + + D G A LF M + + +++ L+ C A
Sbjct: 197 PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK----SPASWNILIGGYVNCREMKLAR 252
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+F+ MP + + +MI Y ++G+V A L+ R ++K D + + A+I Y
Sbjct: 253 TYFDAMP----QKNGVSWITMISGYTKLGDVQSAEELF-RLMSKK---DKLVYDAMIACY 304
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV-KNGF-SP 349
+G KP +DA ++ +M+ +N + P
Sbjct: 305 TQNG-----------------KP------------------KDALKLFAQMLERNSYIQP 329
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
+ T ++++ A + + V + E G +D +L L D+ G+ +A K+F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
+++ + D +Y+++I G TEA +L MI PN++ T L+ Y
Sbjct: 390 SNLN-----KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSH 444
Query: 470 AKRADDVVKIFNQLLDLGISP 490
+ + K FN + D + P
Sbjct: 445 SGLVQEGYKCFNSMKDHNLEP 465
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 135/335 (40%), Gaps = 70/335 (20%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D+ ++ L++ + + VY DM G P+ ++L A G+ + D K I+
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 340 EEMVKNGF-------------------------------SPNWPTYAALLQAYCRARCSE 368
+ +KNG N ++ +LL Y + +
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 369 DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM---------------- 412
+A V+ ++ EK D V +N++ A G+ A +F+ M
Sbjct: 188 EARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 413 --------KSSGDCQP--DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
++ D P + ++ ++I+ Y+ +G V AE E+ R + + L +
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE----ELFRLMSKKDKLVYDA 299
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLG--ISPDDRFCDCLLYVATQIPRQELGK-ITACIEK 519
++ Y + + D +K+F Q+L+ I PD+ ++ +Q+ G + + I +
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 520 AKPKLGSVVRY-LTEEHEGDGDFRKEALELFNSID 553
K+ ++ L + + GDF K A ++F++++
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAK-AFKMFSNLN 393
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 154/342 (45%), Gaps = 20/342 (5%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+N ++ + + F A ++EM+QRG +P+ T+ L+ + + + ++
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
E D + S+I +Y R G ++++ +++++ +++ ++S+++ G +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK----TAASWSSMVSARAGMGMWS 215
Query: 299 ACLSVY----SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
CL ++ S+ + + MV+ L A +I+ +++N N
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVS---ALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
+L+ Y + C + AL ++++M+++ + + Y+ + A G + A+++F+ M
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKR----NNLTYSAMISGLALHGEGESALRMFSKMIK 328
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG-FEPNILALTSLVHLYGKAKRA 473
G +PD+ Y S++N S G V E + EM++ G EP LV L G+A
Sbjct: 329 EG-LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 474 DDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
++ ++ + I +D L ELG+I A
Sbjct: 388 EEALETIQ---SIPIEKNDVIWRTFLSQCRVRQNIELGQIAA 426
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
T F+ +I+ Y +++ L Y++M G +P+ TY LL A R K R+ K I+
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSEDALS--VYKEMKEKGKDVDKVLYNMLFDMCAH 398
++ K G + +L+ Y RC E LS V+++++ K ++ + A
Sbjct: 157 QVFKLGLEADVFVQNSLINMY--GRCGEMELSSAVFEKLESK----TAASWSSMVSARAG 210
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G E + +F M S + + + S + + G + ++ ++R E NI+
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQL 483
TSLV +Y K D + IF ++
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKM 295
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 43/326 (13%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
Y +K+F + K + A K+ D+M GV PN T+S+L++ + + +A FE+M
Sbjct: 377 YCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEML 436
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
+ CEP+ +++ D A L+ + W+ G S N
Sbjct: 437 ASGCEPNSQCFNILLHACVEACQYDRAFRLF-----QSWK-------------GSSVNE- 477
Query: 299 ACLSVYSD---MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-GFSPNWPTY 354
S+Y+D K + PN++ N + R ++ + Y + K F P TY
Sbjct: 478 ---SLYADDIVSKGRTSSPNILKNNGPGSLVNR-----NSNSPYIQASKRFCFKPTTATY 529
Query: 355 AALLQAYCRARCSED---ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
LL+A C D + EMK G +++ ++ L DMC G+ + A++I
Sbjct: 530 NILLKA-----CGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRT 584
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL---YG 468
M S+G +PD YT+ I + + + A +L EM R +PN + +L+ YG
Sbjct: 585 MHSAG-TRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYG 643
Query: 469 KAKRADDVVKIFNQLLDLGISPDDRF 494
+ I+ + + G P+D F
Sbjct: 644 SLLEVRQCLAIYQDMRNAGYKPNDHF 669
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 45/329 (13%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHK---AVEWFEKMPSFECEPDDN 247
D+ ++ +++++L+ +KPN+ ++L+ S H ++ ++ M + D
Sbjct: 282 DYVKSRYIYEDLLKENIKPNIYVINSLMNVNS-----HDLGYTLKVYKNMQILDVTADMT 336
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEK----WRVDTVAFSALIKMYGMSGNYDACLSV 303
++ G VD+A +Y AK + ++D + +IK++ + + L V
Sbjct: 337 SYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKV 396
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
DMK +G PN T+++L+ A A A ++EEM+ +G PN + LL A C
Sbjct: 397 KDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA-CV 455
Query: 364 ARCSED-ALSVYKEMKEKGKDVDKVLY-------------NMLFD-----MCAHFGNAD- 403
C D A +++ KG V++ LY N+L + + N+
Sbjct: 456 EACQYDRAFRLFQSW--KGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPY 513
Query: 404 -EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
+A K F +P TY L+ +C + L++EM G PN + ++
Sbjct: 514 IQASKRFC-------FKPTTATYNILLK--ACGTDYYRGKELMDEMKSLGLSPNQITWST 564
Query: 463 LVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L+ + G + + V+I + G PD
Sbjct: 565 LIDMCGGSGDVEGAVRILRTMHSAGTRPD 593
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
+I +G G+ + ++ Y K + PNM ++ G ++ IYE+++K
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKEN 297
Query: 347 FSPNWPTYAALLQAYCRARCSED---ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
PN +L+ S D L VYK M+ D YN+L C G D
Sbjct: 298 IKPNIYVINSLMNVN-----SHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVD 352
Query: 404 EAMKIFAD---MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
A I+ + M+SSG + D FTY ++I +++ A + ++M G PN
Sbjct: 353 LAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTW 412
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQ 504
+SL+ A + +F ++L G P+ + + LL+ +
Sbjct: 413 SSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVE 456
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 26/310 (8%)
Query: 184 KLFREIKDFGRAEKLFDEM-----LQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
K FR + + + EK D M L +K + F + +C S P A+ + +P
Sbjct: 171 KQFRAMANSVQVEKAIDLMEILAGLGFKIKELVDPFDVVKSCVEI-SNPQLAIRYACLLP 229
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
E L +I+ + + G++ ++ Y+ K + +I + G+ G+Y
Sbjct: 230 HTEL-----LLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYV 284
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLL----YAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
+Y D+ KPN+ N+L+ + +G + +Y+ M + + +Y
Sbjct: 285 KSRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYTLK------VYKNMQILDVTADMTSY 338
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKD----VDKVLYNMLFDMCAHFGNADEAMKIFA 410
LL+ C A + A +YKE K +D Y + + A A+K+
Sbjct: 339 NILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKD 398
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
DMKS G P+ T++SLI+ + G V +A L EM+ G EPN L+H +A
Sbjct: 399 DMKSVG-VTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEA 457
Query: 471 KRADDVVKIF 480
+ D ++F
Sbjct: 458 CQYDRAFRLF 467
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWFEKM 237
YN+ LK D+ R ++L DEM G+ PN IT+STL+ C +
Sbjct: 529 YNILLKACG--TDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGS-------------- 572
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
G+V+ A+ + + R D VA++ IK+ +
Sbjct: 573 ----------------------GDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCL 610
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYA---MGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
S++ +M+ KPN VTYN LL A G R IY++M G+ PN
Sbjct: 611 KLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFL 670
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
L++ +C E+ S K ++G + + + ++ + H
Sbjct: 671 KELIEEWCEGVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHM 715
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
++N+ L+ + ++ +G+ ++ + +M GV +L ++S + P KAV+
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK----- 245
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
LY K+ + ++D VA++ +I+ G S
Sbjct: 246 ------------------------------LYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ + V+ +M+ G +PN+ T+N ++ + R RDA + +EM K G P+ TY L
Sbjct: 276 EFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ R + LS++ M G Y ML +G + ++ MK SGD
Sbjct: 336 ---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGD 392
Query: 418 CQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP 455
PD+ Y ++I+ G + A EMI G P
Sbjct: 393 T-PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/348 (18%), Positives = 144/348 (41%), Gaps = 34/348 (9%)
Query: 162 AFEYFK--QKIKPARHVV-LYNVTLKLFREIKDFGRAEKLFDEMLQRGVK-PNLITFSTL 217
A E+F ++ RH +N + + + +F + L + M+ PN +TF +
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 218 VACASTCSVPHKAVEWFEKMPSFE--------------CEPDDNLSASMIYVYARIGNVD 263
T + +A++ ++K+ F CE + A + +
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNG 183
Query: 264 MALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
++S +T + +++ + G + C + M G ++ +Y+ +
Sbjct: 184 FSVS------------NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYM 231
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
M ++ + A +Y+EM + Y +++A ++ E + V++EM+E+G +
Sbjct: 232 DIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCE 291
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
+ +N + + G +A ++ +M G CQPD+ TY L +S + K +E +
Sbjct: 292 PNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG-CQPDSITYMCL---FSRLEKPSEILS 347
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
L MIR G P + L+ + + V+ ++ + + G +PD
Sbjct: 348 LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 395
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 4/238 (1%)
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
++++G + + TE D ++S + + SG + +Y +MK K +
Sbjct: 199 WSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLD 258
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+V YN ++ A+G ++ ++ EM + G PN T+ +++ C DA +
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM 435
EM ++G D + Y LF + E + +F M SG +P TY L+ +
Sbjct: 319 EMPKRGCQPDSITYMCLF---SRLEKPSEILSLFGRMIRSG-VRPKMDTYVMLMRKFERW 374
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
G + + M G P+ A +++ + D + ++++ G+SP R
Sbjct: 375 GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV YN ++ + ++F EM +RG +PN+ T +T++ A +
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+MP C+PD S + + +++R+ LSL+ R R + L++ + G
Sbjct: 319 EMPKRGCQPD---SITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWG 375
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
L V+ MK G P+ YN ++ A+ + A+ EEM++ G SP
Sbjct: 376 FLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 104/251 (41%), Gaps = 7/251 (2%)
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI--Y 339
V F + K Y + + Y + + + ++ NL+ A+ K +A+ +
Sbjct: 118 VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFG 176
Query: 340 EEMVKNGFS-PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
+ ++ NGFS N + +L+ + + +K+M +G D Y++ D+
Sbjct: 177 KNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCK 236
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G +A+K++ +MKS + D Y ++I V + EM G EPN+
Sbjct: 237 SGKPWKAVKLYKEMKSR-RMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIE 518
+++ L + R D ++ +++ G PD C L+ + P + L I
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC-LFSRLEKPSEILSLFGRMIR 354
Query: 519 KA-KPKLGSVV 528
+PK+ + V
Sbjct: 355 SGVRPKMDTYV 365
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 174/398 (43%), Gaps = 25/398 (6%)
Query: 87 RIWVNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREA 146
RI + P + +L+ +S +L KS+ C + + L E T +
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAAS---RLGKSIH-CYAIKADIESEL-----ETATAVIS 444
Query: 147 MIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG 206
M +P AL AFE P + V +N + + +I D +A ++ M G
Sbjct: 445 MYAKCGRFSP--ALKAFERL-----PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
V P+ T ++ + CS + + ++ + + +++ ++I ++ + + A+
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
L+D+ EK TV+++ ++ Y + G + ++ + MKV +PN VT+ N++ A
Sbjct: 558 VLFDKCGFEK---STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
R +++ +++ GF P +L+ Y + E + + E+ K
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNK----YI 670
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
V +N + A G A A+ +F M+ + + +PD+ ++ S+++ G V E + +
Sbjct: 671 VSWNTMLSAYAAHGLASCAVSLFLSMQEN-ELKPDSVSFLSVLSACRHAGLVEEGKRIFE 729
Query: 447 EMI-RCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
EM R E + +V L GKA + V++ ++
Sbjct: 730 EMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRM 767
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 160/377 (42%), Gaps = 51/377 (13%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQ-RGVKPNLITFS-TLVACASTCSVPHKAVEW 233
VVL+N ++ + A F M + +G+ P+ +F+ L ACA + K +
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFK-KGLRI 122
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
+ + E D + +++ +Y + ++ A ++D+ + D V ++ ++
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVK----DVVTWNTMVSGLAQ 178
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
+G A L ++ DM+ + V+ NL+ A+ + +++ + ++ ++K GF + +
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSS 238
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
L+ YC A SV++E+ K D+ + + AH G +E +++F M+
Sbjct: 239 --GLIDMYCNCADLYAAESVFEEVWRK----DESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 414 S-------------------SGDCQP---------------DNFTYTSLINMYSCMGKVT 439
+ GD D TSL++MYS G++
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
AE L + + ++++ ++++ Y +A + D+ + +F ++ + I P+ +L
Sbjct: 353 IAEQLFINI----EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 500 YVATQIPRQELGKITAC 516
+ LGK C
Sbjct: 409 QGCAGVAASRLGKSIHC 425
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 139/337 (41%), Gaps = 38/337 (11%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA------CAS------- 222
V + ++++ + +D A ++FD+M + V +T++T+V+ C+S
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVFDKMHVKDV----VTWNTMVSGLAQNGCSSAALLLFH 190
Query: 223 ---TCSVPHKAVEWFEKMPSFE-------CEPDDNLSASMIYVYA-RIGNVDMALSLYDR 271
+C V V + +P+ C L +++A G +DM + D
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADL 250
Query: 272 AKTEK-----WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
E WR D ++ ++ Y +G ++ L ++ M+ + N V + L A
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAA 310
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
I++ V+ G + +L+ Y ++C E L + +++ +D D
Sbjct: 311 AYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMY--SKCGE--LEIAEQLFINIEDRDV 366
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
V ++ + G DEA+ +F DM +P+ T TS++ + + +++
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRI-HIKPNAVTLTSVLQGCAGVAASRLGKSIHC 425
Query: 447 EMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
I+ E + T+++ +Y K R +K F +L
Sbjct: 426 YAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 146/353 (41%), Gaps = 46/353 (13%)
Query: 194 RAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+A +F +M GV PN +T + V+ S V ++ E D + S++
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAK 313
+Y++ G ++ A ++D K + D ++++I Y +G +++ M+ +
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG-FSPNWPTYAALLQAYCRARCSEDALS 372
PN++T+N ++ + +A +++ M K+G N T+ ++ Y + ++AL
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 373 VYKEMK-----------------------------------EKGKDVDKVLYNMLFDMCA 397
++++M+ + D + N L D A
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
G+ + + IF M++ D T+ SLI Y G A AL N+M G PN
Sbjct: 571 KSGDIEYSRTIFLGMETK-----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Query: 458 LALTSLVHLYGKAKRADDVVKIFNQLL-DLGISPDDRFCDCLLYVATQIPRQE 509
L+S++ +G D+ K+F + D I P C ++Y+ + R E
Sbjct: 626 GTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLE 678
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 174/420 (41%), Gaps = 21/420 (5%)
Query: 65 LNSQLDAKLDNPDAKSPPSSKSRI-WVNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSCN 123
LN Q AK++N P S K + + + P + Y + L + K+LDS
Sbjct: 14 LNYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLF 73
Query: 124 PTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTL 183
+V L E+ + I L +++ L +P V + L
Sbjct: 74 QQGSKVKRSTYLKLLESCID-SGSIHLGRILHARFGLFT--------EP--DVFVETKLL 122
Query: 184 KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECE 243
++ + A K+FD M +R NL T+S ++ S + + + F M
Sbjct: 123 SMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
PDD L ++ A G+V+ ++ ++++ +Y G D
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ M+ + +++ +N++L A + + +A + +EM K G SP T+ L+ Y +
Sbjct: 239 FRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
+ A+ + ++M+ G D + + H G +A+ +F M +G P+
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG-VVPNAV 353
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
T S ++ SC+ + + + + ++ GF ++L SLV +Y K + +D K+F+ +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 11/310 (3%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V++ N + ++ + A K+FD + + V T+++++ KA E F
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFT 442
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA-KTEKWRVDTVAFSALIKMYGMS 294
+M P+ +MI Y + G+ A+ L+ R K K + +T ++ +I Y +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G D L ++ M+ PN VT +LL A A+ + I+ +++
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
AL Y ++ E + +++ M+ K D + +N L G+ A+ +F MK+
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR-CGFEPNILALTSLVHLYGKAKRA 473
G P+ T +S+I + MG V E + + + P + +++V+LYG+A R
Sbjct: 619 QG-ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 677
Query: 474 DDVVKIFNQL 483
++ ++ ++
Sbjct: 678 EEALQFIQEM 687
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 134/316 (42%), Gaps = 53/316 (16%)
Query: 162 AFEYFKQ----KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG-VKPNLITFST 216
A+E F + ++P +++ +N + + + D G A LF M + G V+ N T++
Sbjct: 437 AYELFTRMQDANLRP--NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 217 LVACASTCSVPHKAVEWFEKMPSFECEPD------------DNLSASMIY---------- 254
++A +A+E F KM P+ + L A M+
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 255 -------------VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACL 301
YA+ G+++ + +++ +T+ D + +++LI Y + G+Y L
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPAL 610
Query: 302 SVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-GFSPNWPTYAALLQA 360
++++ MK G PN T ++++ A G + K ++ + + P +A++
Sbjct: 611 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYL 670
Query: 361 YCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQP 420
Y RA E+AL +EM + + ++ C G+ D A+ ++ S +P
Sbjct: 671 YGRANRLEEALQFIQEMNIQS---ETPIWESFLTGCRIHGDIDMAIHAAENLFS---LEP 724
Query: 421 DNFTYTSLINMYSCMG 436
+N S+++ +G
Sbjct: 725 ENTATESIVSQIYALG 740
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 158/345 (45%), Gaps = 10/345 (2%)
Query: 158 TALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTL 217
+A+L F Q+ + +YN L ++ G+ L+ EM++ GV PN T++ +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 218 VACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW 277
V+ + +A++ F +M S P++ +S+I + + G+ + A+ LY+ +++
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI 359
Query: 278 RVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKT 337
+ ++ +Y + NY LS+++DM+ + V ++ G+ DA++
Sbjct: 360 VPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQS 419
Query: 338 IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
++EE + + TY A+ Q + + AL V + MK + + + Y ++ A
Sbjct: 420 MFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYA 479
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
N D A + F + +G PD + ++N+Y+ + +A+ + +++ +I
Sbjct: 480 KIQNVDCAEEAFRALSKTG--LPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDI 537
Query: 458 LALTSLVHLYGK----AKRADDVVKIFNQLLDLGISPDDRFCDCL 498
+ + +Y K A+ D +VK+ + D+RF L
Sbjct: 538 ELYKTAMRVYCKEGMVAEAQDLIVKMGRE----ARVKDNRFVQTL 578
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 1/282 (0%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
AE + L++ ++ + + ++TL+ A E +E+M + +MI
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
VY R +D A+ ++ A+ +D ++ +I YG G LS++S+M+ G KP
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+YN ++ ++ + + + M +NG + TY L+Q Y + +A
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+KEKG + ++ L G +EA + + M +G PD+ +++ Y
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAG-ISPDSACKRTILKGYMT 996
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
G + +MIR E + + + LY + DV
Sbjct: 997 CGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQDV 1038
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 132/300 (44%), Gaps = 13/300 (4%)
Query: 186 FREIKDFGRAEKLFDEM-LQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEP 244
+R+++DF F M LQ +P+++ ++ ++ A E F +M CEP
Sbjct: 168 WRQVRDF------FSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEP 221
Query: 245 DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
D +M+ YAR G L+ Y + + + T ++ ++ + + ++
Sbjct: 222 DAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLW 281
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+M G PN TY ++ + + +A + EM GF P TY++++ +A
Sbjct: 282 LEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKA 341
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
E A+ +Y++M+ +G + + N +A+ +FADM+ + D
Sbjct: 342 GDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERN-KIPADEVI 400
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGF---EPNILALTSLVHL-YGKAKRADDVVKIF 480
+I +Y +G +A+++ E R E LA+ S VHL G +A DV+++
Sbjct: 401 RGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAM-SQVHLNSGNVVKALDVIEMM 459
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 167/391 (42%), Gaps = 22/391 (5%)
Query: 163 FEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACAS 222
F + K ++ VV+Y + L+L+ ++ AE+ F EML+ G +P+ + T++ C
Sbjct: 175 FSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTML-CTY 233
Query: 223 TCSVPHKAVEWFEKMPSFECEPDDNLSAS----MIYVYARIGNVDMALSLYDRAKTEKWR 278
H A+ F K E LS S M+ + + L+ E
Sbjct: 234 ARWGRHSAMLTFYKAVQ---ERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVP 290
Query: 279 VDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTI 338
+ ++ ++ Y G + L + +MK LG P VTY++++ +A A +
Sbjct: 291 PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGL 350
Query: 339 YEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAH 398
YE+M G P+ T A +L Y + ALS++ +M+ D+V+ ++ +
Sbjct: 351 YEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGK 410
Query: 399 FGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNIL 458
G +A +F + + + D TY ++ ++ G V +A ++ M +
Sbjct: 411 LGLFHDAQSMFEETERL-NLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRF 469
Query: 459 ALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITACIE 518
A ++ Y K + D + F L G+ PD C+ +L + T R LG E
Sbjct: 470 AYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYT---RLNLG------E 519
Query: 519 KAKPKLGSVVRYLTEEHEGDGDFRKEALELF 549
KAK G + + + ++ D + K A+ ++
Sbjct: 520 KAK---GFIKQIMVDQVHFDIELYKTAMRVY 547
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 39/348 (11%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPS 239
N + F D +AE + D +++ G++ T +TL+A +A + + +
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY--LAA 696
Query: 240 FECE-PDDNLSASMIYVYARIGNVDMALSLY-----------------------DRAK-- 273
E + P ++ SMI Y R G ++ A L+ +R K
Sbjct: 697 GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHR 756
Query: 274 ----------TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLL 323
+ +DTV ++ LIK +G +Y M G ++ TYN ++
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 324 YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
GR + A I+ ++G + Y ++ Y + +ALS++ EM++KG
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIK 876
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
YNM+ +CA E ++ M+ +G C D TY +LI +Y+ + EAE
Sbjct: 877 PGTPSYNMMVKICATSRLHHEVDELLQAMERNGRC-TDLSTYLTLIQVYAESSQFAEAEK 935
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ + G + +SL+ KA ++ + + ++ + GISPD
Sbjct: 936 TITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 132/319 (41%), Gaps = 9/319 (2%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V Y+ + L + D+ +A L+++M +G+ P+ T +T+++ KA+ F
Sbjct: 329 VTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFAD 388
Query: 237 MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGN 296
M + D+ + +I +Y ++G A S+++ + D + A+ +++ SGN
Sbjct: 389 MERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGN 448
Query: 297 YDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
L V MK + Y +L + + A+ + + K G P+ +
Sbjct: 449 VVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCND 507
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+L Y R E A K++ D LY + G EA + M
Sbjct: 508 MLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREA 567
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+ + F T +M+ + K + EA+LN + +++AL +++L K ++
Sbjct: 568 RVKDNRFVQTLAESMH-IVNKHDKHEAVLNVS-----QLDVMALGLMLNLRLKEGNLNET 621
Query: 477 VKIFNQLL--DLGISPDDR 493
I N + DLG S +R
Sbjct: 622 KAILNLMFKTDLGSSAVNR 640
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED 369
LG + T L+ GR + ++AK +Y ++ +P +++ AY R ED
Sbjct: 664 LGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLED 722
Query: 370 ALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI 429
A ++ E EKG D V ++L + + G EA I + + + D Y +LI
Sbjct: 723 AYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI-SRTCLEKNIELDTVGYNTLI 781
Query: 430 NMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGIS 489
GK+ A + M G +I +++ +YG+ + D ++IF+ G+
Sbjct: 782 KAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 490 PDDRF 494
D++
Sbjct: 842 LDEKI 846
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 10/260 (3%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEML--QRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+N L+ + I KLF +L Q +P TF L+ + C P ++
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTF--LILLSHACRAPDSSISNVH 144
Query: 236 K----MPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ M + EPD + + G VD A L + DT ++ L+K
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 292 GMSGNYDACLSVYSDMKV-LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+ +M+ KP++V++ L+ + +K R+A + ++ GF P+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
Y +++ +C +A+ VYK+MKE+G + D++ YN L + G +EA
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 411 DMKSSGDCQPDNFTYTSLIN 430
M +G +PD TYTSL+N
Sbjct: 325 TMVDAG-YEPDTATYTSLMN 343
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V ++ ++ E A+ L E+ ++ P+ T++ L+ C H E+ ++
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 237 M-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M F+ +PD +I N+ A+ L + ++ D ++ ++K +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
+ VY MK G +P+ +TYN L++ + +A R +A+ + MV G+ P+ TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 356 ALLQAYCR 363
+L+ CR
Sbjct: 340 SLMNGMCR 347
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDT-VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
+ I NV L+L E +V T +A +L + +G D + ++ + P+
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE----TGRVDEAKDLMKELTEKHSPPD 193
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYE--EMVKNGFS--PNWPTYAALLQAYCRARCSEDAL 371
TYN LL + + K D +YE + +++ F P+ ++ L+ C ++ +A+
Sbjct: 194 TYTYNFLLKHLCKCK---DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
+ ++ G D LYN + EA+ ++ MK G +PD TY +LI
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG-VEPDQITYNTLIFG 309
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVH 465
S G+V EA L M+ G+EP+ TSL++
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G +P+ VT + + ++ R +AK + +E+ + P+ TY LL+ C+ + D
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK---DL 210
Query: 371 LSVYKEMKEKGKDVDK----VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
VY+ + E D D V + +L D + N EAM + + + ++G +PD F Y
Sbjct: 211 HVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG-FKPDCFLYN 269
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+++ + + K +EA + +M G EP+ + +L+ KA R ++ ++D
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 487 GISPD 491
G PD
Sbjct: 330 GYEPD 334
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 116/260 (44%), Gaps = 9/260 (3%)
Query: 261 NVDMALSLYDR-AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM-VT 318
N+ A SL++ A T + +D +++++ YG + + ++ +L ++PN
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQ--HILKSQPNFRPG 121
Query: 319 YNNLLYAMGRAKRARDAKT-----IYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
+ L + A RA D+ + MV NG P+ T +++ C ++A +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 374 YKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYS 433
KE+ EK D YN L + + +M+ D +PD ++T LI+
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 434 CMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDR 493
+ EA L++++ GF+P+ +++ + + + V ++ ++ + G+ PD
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 494 FCDCLLYVATQIPRQELGKI 513
+ L++ ++ R E ++
Sbjct: 302 TYNTLIFGLSKAGRVEEARM 321
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 45/368 (12%)
Query: 114 KLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALL-AFEYFKQKIKP 172
KL +L TEQ ++ G + R A++V + TA+L A FK+ I
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV---AYSKCTAMLDALRLFKE-IGC 358
Query: 173 ARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE 232
+VV + + F + A LF EM ++GV+PN T+S ++ S E
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----E 414
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
++ E + +++ Y ++G V+ A ++ + D VA+SA++ Y
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYA 470
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLL-------YAMGRAKRARDAK--------- 336
+G +A + ++ ++ G KPN T++++L +MG+ K+
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 337 -------TIY---------EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
T+Y EE+ K + ++ +++ Y + + AL V+KEMK++
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
+D V + +F C H G +E K F M P + ++++YS G++ +
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 441 AEALLNEM 448
A ++ M
Sbjct: 651 AMKVIENM 658
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 143/326 (43%), Gaps = 43/326 (13%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
LF M G +PN TF+ + + V + ++ + + +S S+I +Y
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 258 RIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMV 317
+ GNV A L+D+ + + V ++++I Y +G L ++ M++ + +
Sbjct: 241 KCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 318 TYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM 377
++ +++ K R + ++ +VK GF + AL+ AY + DAL ++KE+
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 378 KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTY------------ 425
G + V + + +EA+ +F++MK G +P+ FTY
Sbjct: 357 GCVG---NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISP 412
Query: 426 -------------------TSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
T+L++ Y +GKV EA + + + + +I+A ++++
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID----DKDIVAWSAMLAG 468
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDD 492
Y + + +K+F +L GI P++
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNE 494
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 125/293 (42%), Gaps = 9/293 (3%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A++LF + + G++ + FS+++ ++T + + F D ++ S++
Sbjct: 77 AKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVD 136
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y + N ++D K + V ++ LI Y + D L+++ M+ G +P
Sbjct: 137 TYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP 192
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
N T+ L + ++ +VKNG P +L+ Y + A ++
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+ + K V +N + A G EA+ +F M+ + + ++ S+I + +
Sbjct: 253 DKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLN-YVRLSESSFASVIKLCAN 307
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLG 487
+ ++ E L +++ GF + T+L+ Y K D +++F ++ +G
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 182/412 (44%), Gaps = 34/412 (8%)
Query: 117 KSLDSCN-----PTEQQVSEMLVKG-LGENVTEREAMIVLDNMV-NPETALLAFEYFKQK 169
K+L C+ +QV +++G +V MI N E+A F+ +
Sbjct: 137 KALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSE- 195
Query: 170 IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQ-RGVKPNLIT-FSTLVACASTCSVP 227
R VV +N + + + F +K++ ML KPN +T S AC + +
Sbjct: 196 ----RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI 251
Query: 228 HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSAL 287
+E +KM + D +L ++I YA+ G++D A +L+D +EK D+V + A+
Sbjct: 252 F-GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM-SEK---DSVTYGAI 306
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF 347
I Y G ++++S+M+ +G + T+N ++ + + + + EM++ G
Sbjct: 307 ISGYMAHGLVKEAMALFSEMESIG----LSTWNAMISGLMQNNHHEEVINSFREMIRCGS 362
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
PN T ++LL + + + ++ G D + + + D A G A +
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 408 IFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY 467
+F + K +T++I Y+ G A +L ++M G +P+ + LT+++ +
Sbjct: 423 VFDNCK-----DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAF 477
Query: 468 GKAKRADDVVKIFNQLL-DLGISPDDRFCDCLLYVATQIPRQELGKITACIE 518
+ +D IF+ +L I P C++ V ++ GK++ +E
Sbjct: 478 AHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA-----GKLSDAME 524
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 32/268 (11%)
Query: 199 FDEMLQRGVKPNLITFSTLVACASTCS--VPHKAVEWFEKMPSFECEPDDNL--SASMIY 254
F EM++ G +PN +T S+L+ + S K + F + D+N+ + S+I
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF----AIRNGADNNIYVTTSIID 409
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
YA++G + A ++D K +A++A+I Y + G+ D+ S++ M+ LG KP
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRS----LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKP 465
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMV-KNGFSPNWPTYAALLQAYCRARCSEDALSV 373
+ VT +L A + + A+ I++ M+ K P YA ++ RA DA+
Sbjct: 466 DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 374 YKEMKEKGKDVDKV--LYNMLFDMCAHFGNADEAM----KIFADMKSSGDCQPDNF-TYT 426
+M +D + ++ L + + G+ + A ++F + +P+N YT
Sbjct: 526 ISKMP-----IDPIAKVWGALLNGASVLGDLEIARFACDRLF-------EMEPENTGNYT 573
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFE 454
+ N+Y+ G+ EAE + N+M R G +
Sbjct: 574 IMANLYTQAGRWEEAEMVRNKMKRIGLK 601
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 157/359 (43%), Gaps = 65/359 (18%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPH 228
++ ++VV + + + K AE LF EM +R N+++++T++ +
Sbjct: 102 RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRID 157
Query: 229 KAVEWFEKMPSFECEPDDNLSA--SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
KA+E F++MP + N+ + SM+ + G +D A++L++R R D V+++A
Sbjct: 158 KALELFDEMP------ERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTA 207
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG 346
++ +G D ++ M + N++++N ++ + R +A +++ M +
Sbjct: 208 MVDGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
F+ +W T ++ + R R A ++ M EK + + + + +EA+
Sbjct: 264 FA-SWNT---MITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEAL 315
Query: 407 KIFADMKSSGDCQPDNFTYTS-----------------------------------LINM 431
+F+ M G +P+ TY S L+NM
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375
Query: 432 YSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
YS G++ A + + + C + ++++ S++ +Y + ++++NQ+ G P
Sbjct: 376 YSKSGELIAARKMFDNGLVC--QRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKP 432
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 154/341 (45%), Gaps = 43/341 (12%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R+VV +N + + + +A +LFDEM +R N+++++++V +A+
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAM 191
Query: 232 EWFEKMPS-------------------------FECEPDDNLSA--SMIYVYARIGNVDM 264
FE+MP F+C P+ N+ + +MI YA+ +D
Sbjct: 192 NLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
A L+ + E+ D +++ +I + + + ++ M + N++++ ++
Sbjct: 252 ADQLF-QVMPER---DFASWNTMITGFIRNREMNKACGLFDRM----PEKNVISWTTMIT 303
Query: 325 AMGRAKRARDAKTIYEEMVKNG-FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKD 383
K +A ++ +M+++G PN TY ++L A + +++ + +
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 384 VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEA 443
++++ + L +M + G A K+F + CQ D ++ S+I +Y+ G EA
Sbjct: 364 KNEIVTSALLNMYSKSGELIAARKMF---DNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 444 LLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL 484
+ N+M + GF+P+ + +L+ A + ++ F L+
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 132/285 (46%), Gaps = 9/285 (3%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG-VKPNLITFSTLVACASTCSVPHKA 230
P ++V+ + + + E K+ A +F +ML+ G VKPN+ T+ ++++ S + +
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 350
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
+ + + + ++ ++++++ +Y++ G + A ++D + D ++++++I +
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV--CQRDLISWNSMIAV 408
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP- 349
Y G+ + +Y+ M+ G KP+ VTY NLL+A A ++++V++ P
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPL 468
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
Y L+ RA +D V + + + Y + C A ++
Sbjct: 469 REEHYTCLVDLCGRAGRLKD---VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
+ +G D TY + N+Y+ GK EA + +M G +
Sbjct: 526 KKVLETG--SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 149/370 (40%), Gaps = 40/370 (10%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
R VV + + F A LF EM + VK N T+ +++ + ++
Sbjct: 76 RDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
+ C + + ++++ +YAR G ++ A +D K D V+++A+I Y
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER----DLVSWNAMIDGYTA 191
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
+ D S++ M G KP+ T+ +LL A K ++ +K GF +
Sbjct: 192 NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSAL 251
Query: 354 YAALLQAY-----------------------CRA---------RCSEDALSVYKEMKEKG 381
+L+ AY C A C+ DA ++K+M
Sbjct: 252 IRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK 311
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+D+V+ + + +C + +I S + D SLI+MY+ G++ +A
Sbjct: 312 TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDA 371
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYV 501
EM E ++ + TSL+ YG+ + + ++N++ I P+D LL
Sbjct: 372 VLAFEEMK----EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 502 ATQIPRQELG 511
+ + ELG
Sbjct: 428 CSHTGQTELG 437
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 41/293 (13%)
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
+I +Y + G+V A L+DR + D V+++A+I + G + L ++ +M
Sbjct: 53 LIDLYLKQGDVKHARKLFDRIS----KRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED 108
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
K N TY ++L + ++ I+ + K + N +ALL Y R E+A
Sbjct: 109 VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN- 430
+ MKE+ D V +N + D AD + +F M + G +PD FT+ SL+
Sbjct: 169 LQFDSMKER----DLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-KPDCFTFGSLLRA 223
Query: 431 --MYSCMGKVTE----------------AEALLNEMIRCGFEPN------------ILAL 460
+ C+ V+E +L+N ++CG N +L+
Sbjct: 224 SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 461 TSLVHLYGKAKR-ADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
T+L+ + + D IF ++ + D+ +L + T I +G+
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGR 336
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 11/242 (4%)
Query: 198 LFDEMLQRGVKPNLITFSTLVA-CASTCSVP-HKAVEWFEKMPSFECEPDDNLSASMIYV 255
+F +M++ K + + S+++ C + SV + + F + S + D L S+I +
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFA-LKSSQIRFDVALGNSLIDM 361
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
YA+ G ++ A+ ++ K + D ++++LI YG GN++ + +Y+ M+ KPN
Sbjct: 362 YAKSGEIEDAVLAFEEMKEK----DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPN 417
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMV-KNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
VT+ +LL A + IY+ M+ K+G + ++ R+ E+A ++
Sbjct: 418 DVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALI 477
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+ KE + + D C GN + + S +P N Y +L ++Y+
Sbjct: 478 RS-KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVN--YINLASVYAA 534
Query: 435 MG 436
G
Sbjct: 535 NG 536
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 158/362 (43%), Gaps = 38/362 (10%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG-VKPNLITFSTLVACASTCSVPHKA 230
P + +L+N + +R+ + + + ++F +++ + + T ++ +
Sbjct: 181 PEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLG 240
Query: 231 VEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKM 290
++ C D + I +Y++ G + M +L+ + + D VA++A+I
Sbjct: 241 MQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHG 296
Query: 291 YGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL---------LYA----------MGRAKR 331
Y +G + LS++ ++ + GA+ T +L +YA + A
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASV 356
Query: 332 ARDAKTIYE-----EMVKNGF--SP--NWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
+ T+Y E + F SP + P++ A++ Y + +EDA+S+++EM++
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 383 DVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAE 442
+ V + CA G A K D+ S D + + T+LI MY+ G + EA
Sbjct: 417 SPNPVTITCILSACAQLG-ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVA 502
L + M + N + +++ YG + + + IF ++L+ GI+P C+LY
Sbjct: 476 RLFDLMTK----KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 503 TQ 504
+
Sbjct: 532 SH 533
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 146/335 (43%), Gaps = 18/335 (5%)
Query: 166 FKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCS 225
F++ KP +V YN + + + + LF E++ G + T +LV +
Sbjct: 279 FREFRKP--DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 226 VPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
+ + A+ + +F ++S ++ VY+++ ++ A L+D + + +++
Sbjct: 337 LIY-AIHGYCLKSNFLSHA--SVSTALTTVYSKLNEIESARKLFDESPEKSLP----SWN 389
Query: 286 ALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
A+I Y +G + +S++ +M+ PN VT +L A + K +++ +
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEA 405
F + AL+ Y + +A ++ M +K ++V +N + G EA
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQGQEA 505
Query: 406 MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILALTSLV 464
+ IF +M +SG P T+ ++ S G V E + + N MI R GFEP++ +V
Sbjct: 506 LNIFYEMLNSG-ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMV 564
Query: 465 HLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+ G+A ++ + I P + LL
Sbjct: 565 DILGRAGHLQRALQFIEA---MSIEPGSSVWETLL 596
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 18/244 (7%)
Query: 195 AEKLFDEMLQRGVKPNLITFS-TLVACASTCSVPHKAVEWFEKM-PSFECEPDDNLSASM 252
A LF EM + PN +T + L ACA ++ +W + S + E +S ++
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGAL--SLGKWVHDLVRSTDFESSIYVSTAL 461
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
I +YA+ G++ A L+D T+K + V ++ +I YG+ G L+++ +M G
Sbjct: 462 IGMYAKCGSIAEARRLFD-LMTKK---NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMV-KNGFSPNWPTYAALLQAYCRARCSEDAL 371
P VT+ +LYA A ++ I+ M+ + GF P+ YA ++ RA + AL
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 372 SVYKEMK-EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLI- 429
+ M E G V + L C + + A + + + PDN Y L+
Sbjct: 578 QFIEAMSIEPGSSV----WETLLGACRIHKDTNLARTVSEKLF---ELDPDNVGYHVLLS 630
Query: 430 NMYS 433
N++S
Sbjct: 631 NIHS 634
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 144/333 (43%), Gaps = 17/333 (5%)
Query: 186 FREIKDFGRAEKLFDEMLQRGVKPNLITFS-TLVACASTCSVPH-KAVEWFEKMPSFECE 243
F E A LF EML G P+ T + L C+S S+P K + + +
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 244 PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSV 303
D L ++++ +Y++ G++ +A +YDR +D V+ S+LI Y G +
Sbjct: 586 MD--LGSALVNMYSKCGSLKLARQVYDRLP----ELDPVSCSSLISGYSQHGLIQDGFLL 639
Query: 304 YSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCR 363
+ DM + G + +++L A + + ++ + K G ++LL Y +
Sbjct: 640 FRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSK 699
Query: 364 ARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNF 423
+D + ++ G D+ + + L A G A+EA++++ MK G +PD
Sbjct: 700 FGSIDDCCKAFSQIN--GPDL--IAWTALIASYAQHGKANEALQVYNLMKEKG-FKPDKV 754
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIR-CGFEPNILALTSLVHLYGKAKRADDVVKIFNQ 482
T+ +++ S G V E+ LN M++ G EP +V G++ R + N
Sbjct: 755 TFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFIN- 813
Query: 483 LLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
++ I PD LL ELGK+ A
Sbjct: 814 --NMHIKPDALVWGTLLAACKIHGEVELGKVAA 844
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 170/384 (44%), Gaps = 49/384 (12%)
Query: 162 AFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST-LVAC 220
A++ F+ + + +V +N + +++G LF EM KP+ T+S+ L AC
Sbjct: 204 AYKVFRDSL--SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 221 ASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY-VYARIGNVDMALSLYDRAKTEKWRV 279
AS + V + +C +D + I +YA+ G++ A+ ++ R
Sbjct: 262 ASLEKLRFGKVV---QARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS--- 315
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
V+++ ++ Y S + + L ++ +M+ G + N T +++ A GR +A ++
Sbjct: 316 -VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+ K+GF + AAL+ Y ++ + + V++++ + + + + N++ +
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQR---QNIVNVMITSFSQS 431
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC--MGK--------------VTEAEA 443
+A+++F M G + D F+ SL+++ C +GK +T +
Sbjct: 432 KKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 444 LLNEMIRCG-------------FEPNIL--ALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
L +CG F+ N ++ S + YG + A + +F+++LD G
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA---IGLFSEMLDDGT 547
Query: 489 SPDDRFCDCLLYVATQIPRQELGK 512
SPD+ +L V + P GK
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGK 571
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 139/349 (39%), Gaps = 51/349 (14%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+ NV + F + K G+A +LF MLQ G++ + + +L++ C K V +
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD-CLNLGKQVHGYTLK 478
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
D + +S+ +Y++ G+++ + L+ + D ++++I + G
Sbjct: 479 SGLVL--DLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWASMISGFNEYGYL 532
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAAL 357
+ ++S+M G P+ T +L K I+ ++ G +AL
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 358 LQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ Y + + A VY + E +D V + L + G + +F DM SG
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPE----LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 418 CQPDNFTYTS-----------------------------------LINMYSCMGKVTEAE 442
D+F +S L+ MYS G + +
Sbjct: 649 TM-DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 443 ALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+++ P+++A T+L+ Y + +A++ ++++N + + G PD
Sbjct: 708 KAFSQING----PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPD 752
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 9/273 (3%)
Query: 240 FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDA 299
F E D + +S+I +Y++ G V A ++ + D V F+A+I Y + D
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADE 201
Query: 300 CLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQ 359
L++ DMK+LG KP+++T+N L+ + I E M +G+ P+ ++ +++
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
+E A +K+M G + L C +I +G +
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG-LE 320
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
F ++L++MY G ++EA L + + + S++ Y AD V++
Sbjct: 321 DHGFVRSALLDMYGKCGFISEAMILFRKTPK----KTTVTFNSMIFCYANHGLADKAVEL 376
Query: 480 FNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
F+Q+ G D +L + +LG+
Sbjct: 377 FDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ 409
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 48/343 (13%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V++N + + A L +M G+KP++IT++ L++ S K E E
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M C + ++ D V+++++I G+
Sbjct: 243 LM----C-------------------------------LDGYKPDVVSWTSIIS--GLVH 265
Query: 296 NY--DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
N+ + + M G PN T LL A + K I+ V G +
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFV 325
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
+ALL Y + +A+ ++++ +K V +N + A+ G AD+A+++F M+
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILALTSLVHLYGKAKR 472
++G+ + D+ T+T+++ S G + L M + P + +V L G R
Sbjct: 382 ATGE-KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG---R 437
Query: 473 ADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
A +V+ + + + + PD LL EL +I A
Sbjct: 438 AGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAA 480
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 157/348 (45%), Gaps = 21/348 (6%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
+V + N + ++ + A K+FDEM +++++++++ + P A+E F
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVW----DVVSWNSIIESYAKLGKPKVALEMF 216
Query: 235 EKMPS-FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGM 293
+M + F C PD+ +++ A +G + L+ A T + + + L+ MY
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 294 SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPT 353
G D +V+S+M V ++V++N ++ + R DA ++E+M + + T
Sbjct: 277 CGMMDEANTVFSNMSV----KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 354 YAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG---NADE----AM 406
++A + Y + +AL V ++M G ++V + CA G + E A+
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
K D++ +G +N LI+MY+ KV A A+ + + E +++ T ++
Sbjct: 393 KYPIDLRKNGH-GDENMVINQLIDMYAKCKKVDTARAMFDSL--SPKERDVVTWTVMIGG 449
Query: 467 YGKAKRADDVVKIFNQLL--DLGISPDDRFCDCLLYVATQIPRQELGK 512
Y + A+ +++ +++ D P+ C L + +GK
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
NL++ +I Y +G + A+SL R V +++LI+ YG +G + CL ++
Sbjct: 60 NLTSHLISTYISVGCLSHAVSLLRRFPPSDAGV--YHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 307 MKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARC 366
M L P+ T+ + A G R ++ + + GF N AL+ Y R R
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 367 SEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
DA V+ EM D V +N + + A G A+++F+ M + C+PDN T
Sbjct: 178 LSDARKVFDEMSVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 427 SL------INMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIF 480
++ + +S +GK A+ +EMI+ N+ LV +Y K D+ +F
Sbjct: 234 NVLPPCASLGTHS-LGKQLHCFAVTSEMIQ-----NMFVGNCLVDMYAKCGMMDEANTVF 287
Query: 481 NQL 483
+ +
Sbjct: 288 SNM 290
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 142/333 (42%), Gaps = 44/333 (13%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-S 215
E A+ FE +++ K VV ++ + + + A + +ML G+KPN +T S
Sbjct: 312 EDAVRLFEKMQEE-KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 216 TLVACASTCSVPH-KAVEWFE-KMP---SFECEPDDNLSAS-MIYVYARIGNVDMALSLY 269
L CAS ++ H K + + K P D+N+ + +I +YA+ VD A +++
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 270 DRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM--KVLGAKPNMVTYNNLLYAMG 327
D + + K R D V ++ +I Y G+ + L + S+M + +PN T + L A
Sbjct: 431 D-SLSPKER-DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 328 RAKRARDAKTIYEEMVKNG--------------------------------FSPNWPTYA 355
R K I+ ++N + N T+
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+L+ Y E+AL ++ EM+ G +D V ++ C+H G D+ M+ F MK+
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
P Y L+++ G++ A L+ EM
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 11/285 (3%)
Query: 199 FDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYAR 258
+ + G P++ TF + S + + + D + S+++ Y
Sbjct: 94 YKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGV 153
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
G A ++ D V+++ +I + +G Y L +S M V +PN+ T
Sbjct: 154 CGESRNACKVFGEMPVR----DVVSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLAT 206
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
Y +L + GR K I+ ++K + T AL+ Y + DA+ V+ E++
Sbjct: 207 YVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELE 266
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV 438
+K DKV +N + H + EA+ +F+ M++S +PD TS+++ + +G V
Sbjct: 267 KK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAV 322
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+ ++ G + + T++V +Y K + ++IFN +
Sbjct: 323 DHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 147/314 (46%), Gaps = 17/314 (5%)
Query: 180 NVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM-P 238
N + ++ + + A ++F E+ K + ++++++++ C +A++ F M
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGEL----EKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
S +PD ++ S++ A +G VD +++ T + DT +A++ MY G +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
L +++ ++ N+ T+N LL + ++ +EEMVK GF PN T+ A L
Sbjct: 359 TALEIFNGIR----SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAAL 414
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVL--YNMLFDMCAHFGNADEAMKIFADMKSSG 416
A C ++ + +MK + ++ L Y + D+ G DEA+++ M
Sbjct: 415 NACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP--- 471
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEA-EALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
+PD ++++ G + E + +L+ + FE + + + L +++ +R DD
Sbjct: 472 -VKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVL-LSNIFAANRRWDD 529
Query: 476 VVKIFNQLLDLGIS 489
V +I + GIS
Sbjct: 530 VARIRRLMKVKGIS 543
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 173/380 (45%), Gaps = 20/380 (5%)
Query: 108 TSSPLEKLAKSLDSCNPTEQQVSEMLVKGLGENVTEREAMIVLD---NMVNPETALLAFE 164
SSP A S S N E + LV LG + ++ + ++D + P ++L F
Sbjct: 5 VSSPFISRALS-SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF- 62
Query: 165 YFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACAST 223
+++ PA++V L+N ++ F + F A + + ++ + V P+ TF +++ ACA
Sbjct: 63 ---RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 224 CSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
+ +E++ E D + +++ +Y+R+G + A ++D D V+
Sbjct: 120 FDAEMGDLV-YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVS 174
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
+++LI Y G Y+ L +Y ++K P+ T +++L A G + + ++ +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
K+G + L+ Y + R DA V+ EM + D V YN + +
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMVE 290
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSL 463
E++++F +++ +PD T +S++ + ++ A+ + N M++ GF L
Sbjct: 291 ESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 464 VHLYGKAKRADDVVKIFNQL 483
+ +Y K +FN +
Sbjct: 349 IDVYAKCGDMITARDVFNSM 368
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 157/386 (40%), Gaps = 55/386 (14%)
Query: 173 ARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE 232
R V YN + + +++ + ++F E L + KP+L+T S+++ A
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+ M + + +I VYA+ G++ A +++ + + DTV+++++I Y
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK----DTVSWNSIISGYI 384
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
SG+ + ++ M ++ + + +TY L+ R + K ++ +K+G +
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 353 TYAALLQAYCRARCSE--DALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
AL+ Y A+C E D+L ++ M D V +N + C FG+ +++
Sbjct: 445 VSNALIDMY--AKCGEVGDSLKIFSSMGTG----DTVTWNTVISACVRFGDFATGLQVTT 498
Query: 411 DMKSSGDCQPDNFTY-----------------------------------TSLINMYSCM 435
M+ S + PD T+ +LI MYS
Sbjct: 499 QMRKS-EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 436 GKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC 495
G + + + M R +++ T +++ YG + ++ F + GI PD
Sbjct: 558 GCLENSSRVFERMSR----RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 496 DCLLYVATQIPRQELGKITACIEKAK 521
++Y + + G AC EK K
Sbjct: 614 IAIIYACSHSGLVDEG--LACFEKMK 637
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCS-VPHKAVE 232
+ V +N + + + D A KLF M+ + + IT+ L++ ++ + +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+ S C D ++S ++I +YA+ G V +L ++ T DTV ++ +I
Sbjct: 431 HSNGIKSGIC-IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVTWNTVISACV 485
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G++ L V + M+ P+M T+ L R K I+ +++ G+
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 353 TYAALLQAYCRARC-------------------------------SEDALSVYKEMKEKG 381
AL++ Y + C E AL + +M++ G
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
D V++ + C+H G DE + F MK+ P Y ++++ S K+++A
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 442 EALLNEM 448
E + M
Sbjct: 666 EEFIQAM 672
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 10/316 (3%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
RH+V +N + + + A +++ M+ V P+ T S++ S S+ +A
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 234 FEKMPSFECEPDDNLSAS-MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
E + S ++ +Y + G A + DR + + D V +ALI Y
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK----DVVLITALIVGYS 243
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G + + M V +PN TY ++L + G K + K I+ MVK+GF
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADM 412
+ +LL Y R +D+L V+K ++ ++V + L G + A+ F M
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYP----NQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 413 KSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKR 472
+P++FT +S + S + E + + + GF+ + A + L+ LYGK
Sbjct: 360 MRD-SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 473 ADDVVKIFNQLLDLGI 488
+D +F+ L ++ +
Sbjct: 419 SDMARLVFDTLSEVDV 434
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 126/285 (44%), Gaps = 14/285 (4%)
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSL 268
PN +++++L++ A+ F KM +P+ +S + + + + +
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 269 YDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR 328
+ + D A S LI +YG G D V+ + ++ ++++ N ++Y+ +
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL----SEVDVISLNTMIYSYAQ 446
Query: 329 AKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL 388
R+A ++E M+ G PN T ++L A +R E+ ++ ++ +
Sbjct: 447 NGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDH 506
Query: 389 YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
Y + D+ G +E A+M ++ PD + +L++ KV AE + ++
Sbjct: 507 YACMVDLLGRAGRLEE-----AEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKI 561
Query: 449 IRC--GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+ G E ++ +++L GK R V+++ +++ D+ + +
Sbjct: 562 LEIEPGDEGTLILMSNLYASTGKWNR---VIEMKSKMKDMKLKKN 603
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P ++ + +N + + + A LF EM G+KPN T +++ ++ + +
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ + D N+ ++ +YA+ + A L++ + EK + V +++++ Y
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK---NNVTWTSMLTGY 202
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
+G + + D++ G + N T+ ++L A R ++ +VK+GF N
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNI 262
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVL-YNMLFDMCAHFGNADEAMKIFA 410
+AL+ Y + R E A ++ + G +VD V+ +N + C G EA+ +F
Sbjct: 263 YVQSALIDMYAKCREMESARALLE-----GMEVDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 411 DMKSSGDCQPDNFTYTSLINMYSC----MGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
M D + D+FT S++N ++ M + A L+ ++ G+ L +LV +
Sbjct: 318 RMHER-DMKIDDFTIPSILNCFALSRTEMKIASSAHCLI---VKTGYATYKLVNNALVDM 373
Query: 467 YGKAKRADDVVKIFNQLLD 485
Y K D +K+F +++
Sbjct: 374 YAKRGIMDSALKVFEGMIE 392
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 24/359 (6%)
Query: 138 GENVTEREAMIVLDNMVNPETALLAF----------EYFKQKIKPARHVVLYNVTLKLFR 187
GE + D VN LLA EY + ++ ++ V + L +
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 188 EIKDFGRAEKLFDEMLQRGVKPNLITF-STLVACASTCSVPHKAVEWFEKMPSFECEPDD 246
+ +A + F ++ + G + N TF S L ACAS S V+ + + +
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV-SACRVGVQVHCCIVKSGFKTNI 262
Query: 247 NLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSD 306
+ +++I +YA+ ++ A +L + + + D V+++++I G LS++
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVD----DVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 307 MKVLGAKPNMVTYNNLL--YAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
M K + T ++L +A+ R + + A + + +VK G++ AL+ Y +
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTE-MKIASSAHCLIVKTGYATYKLVNNALVDMYAKR 377
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
+ AL V++ M EK D + + L H G+ DEA+K+F +M+ G PD
Sbjct: 378 GIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSYDEALKLFCNMRVGG-ITPDKIV 432
Query: 425 YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
S+++ + + + + + I+ GF ++ SLV +Y K +D IFN +
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM 491
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 21/264 (7%)
Query: 192 FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDN---- 247
G A +F M +R +K + T +++ C + K S C
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIA------SSAHCLIVKTGYAT 362
Query: 248 ---LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVY 304
++ +++ +YA+ G +D AL +++ EK D ++++AL+ +G+YD L ++
Sbjct: 363 YKLVNNALVDMYAKRGIMDSALKVFE-GMIEK---DVISWTALVTGNTHNGSYDEALKLF 418
Query: 305 SDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRA 364
+M+V G P+ + ++L A + ++ +K+GF + +L+ Y +
Sbjct: 419 CNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKC 478
Query: 365 RCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT 424
EDA ++ M+ + D + + L A G ++A + F M++ P
Sbjct: 479 GSLEDANVIFNSMEIR----DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH 534
Query: 425 YTSLINMYSCMGKVTEAEALLNEM 448
Y +I+++ G + E LL++M
Sbjct: 535 YACMIDLFGRSGDFVKVEQLLHQM 558
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 116/246 (47%), Gaps = 12/246 (4%)
Query: 229 KAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALI 288
+A + F+KMP E D+ +MI Y+ + A L+ R+ K +T++++ALI
Sbjct: 46 EARQMFDKMP----ERDEFTWNTMIVAYSNSRRLSDAEKLF-RSNPVK---NTISWNALI 97
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
Y SG+ +++ +M+ G KPN T ++L + I+ +K GF
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD 157
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
+ LL Y + + +A +++ M+ + + V + + + G A +A++
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETME---GEKNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
F D++ G+ Q + +T+ S++ + + + +++ GF+ NI ++L+ +Y
Sbjct: 215 FRDLRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 469 KAKRAD 474
K + +
Sbjct: 274 KCREME 279
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 18/291 (6%)
Query: 198 LFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK-MPSFECEPDDNLSASMIYVY 256
LF+ M + V N T+ TL+ + S H+ +WF + E L S++ +Y
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLLDMY 287
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
+ G++ A +++ E VD V ++A+I Y +G+ + LS++ MK + KPN
Sbjct: 288 VKCGDISNARRVFN----EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA--ALLQAYCRARCSEDALSVY 374
VT ++L G + ++++ +K G W T AL+ Y + + DA V+
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI---WDTNVANALVHMYAKCYQNRDAKYVF 400
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+ EK D V +N + + G+ EA+ +F M S P+ T SL + +
Sbjct: 401 EMESEK----DIVAWNSIISGFSQNGSIHEALFLFHRMNSE-SVTPNGVTVASLFSACAS 455
Query: 435 MGKVTEAEALLNEMIRCGF--EPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+G + +L ++ GF ++ T+L+ Y K IF+ +
Sbjct: 456 LGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 148/353 (41%), Gaps = 49/353 (13%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
+V++ + + A LF +M +KPN +T ++++ S C + +E
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL---SGCGLIEN-LELGR 363
Query: 236 KMPSFECEP---DDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
+ + D N++ +++++YA+ A +++ ++EK D VA++++I +
Sbjct: 364 SVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE-MESEK---DIVAWNSIISGFS 419
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF----- 347
+G+ L ++ M PN VT +L A +++ VK GF
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS 479
Query: 348 ----------------------------SPNWPTYAALLQAYCRARCSEDALSVYKEMKE 379
N T++A++ Y + + +L +++EM +
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Query: 380 KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVT 439
K + ++ + + C H G +E K F+ M + P YT +++M + G++
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 440 EAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDD 492
+A ++ +M +P++ + +H G R D + ++LDL PDD
Sbjct: 600 QALDIIEKM---PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDL--HPDD 647
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 13/220 (5%)
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
+DA+ +++++ + P++ + +L+ YC + S + + +Y + + G D ++++
Sbjct: 93 KDARLVFDQIPE----PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKA 148
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
C + D KI + DN T L++MY+ G++ A + N++
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVP--SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL-- 204
Query: 453 FEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
N++ TS++ Y K ++ + +FN++ + + ++ L+ T++ GK
Sbjct: 205 --RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK 262
Query: 513 -ITACIEKAKPKLGS-VVRYLTEEHEGDGDFRKEALELFN 550
C+ K+ +L S +V L + + GD A +FN
Sbjct: 263 WFHGCLVKSGIELSSCLVTSLLDMYVKCGDI-SNARRVFN 301
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 155 NPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF 214
+P++A L F+ ++K + + ++ + + + D + +LF+EML++ KPN TF
Sbjct: 495 DPQSARLIFDTIEEK-----NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTF 549
Query: 215 STLVACASTCSVPHKAVEWFEKM-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAK 273
+++++ + ++ ++F M + P M+ + AR G ++ AL + ++
Sbjct: 550 TSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP 609
Query: 274 TEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTY----NNLLYAMGRA 329
+ D F A + GM +D L K+L P+ +Y +NL + GR
Sbjct: 610 IQP---DVRCFGAFLHGCGMHSRFD--LGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 330 KRARDAKTIYEE 341
+A++ + + ++
Sbjct: 665 NQAKEVRNLMKQ 676
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 9/185 (4%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D V + L+ MY G + V++D+ + N+V + +++ + + ++
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITL----RNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
M +N N TY L+ A + + + + G ++ L L DM
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC 290
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G+ A ++F + D +T++I Y+ G V EA +L +M +PN +
Sbjct: 291 GDISNARRVFNEHS-----HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 460 LTSLV 464
+ S++
Sbjct: 346 IASVL 350
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 21/319 (6%)
Query: 169 KIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG-VKPNLITFSTLVACASTCSVP 227
KI+ +V ++N ++ + EI + A L+ EM G V+P+ T+ L+ +T +
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA-- 135
Query: 228 HKAVEWFEKMPSFECEPDDN----LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVA 283
V E + S + S++++YA G+V A ++D+ + D VA
Sbjct: 136 --DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVA 189
Query: 284 FSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
++++I + +G + L++Y++M G KP+ T +LL A + K ++ M+
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNAD 403
K G + N + LL Y R E+A +++ EM +K + V + L A G
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGK 305
Query: 404 EAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMI-RCGFEPNILALTS 462
EA+++F M+S+ P T+ ++ S G V E M EP I
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 463 LVHLY---GKAKRADDVVK 478
+V L G+ K+A + +K
Sbjct: 366 MVDLLARAGQVKKAYEYIK 384
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
K ++ ++N L A GN+ A ++ +M+ SG +PD TY LI + M V
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 442 EALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
E + + +IR GF I SL+HLY K+F+++
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 29/292 (9%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-STLVACASTCSVP-HK 229
P + +V +N + F E A L+ EM +G+KP+ T S L ACA ++ K
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
V + M + + S ++ +YAR G V+ A +L+D E ++V++++LI
Sbjct: 243 RVHVY--MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD----EMVDKNSVSWTSLIV 296
Query: 290 MYGMSGNYDACLSVYSDMKVL-GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-GF 347
++G + ++ M+ G P +T+ +LYA ++ + M +
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 348 SPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMK 407
P + ++ RA + A Y+ +K + V++ L C G++D A
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKA---YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE- 412
Query: 408 IFADMK-------SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCG 452
FA ++ SGD Y L NMY+ + ++ + + +M+R G
Sbjct: 413 -FARIQILQLEPNHSGD-------YVLLSNMYASEQRWSDVQKIRKQMLRDG 456
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 132/298 (44%), Gaps = 15/298 (5%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A+ LFD+M PNLI ++ +++ + +A++ F +M + + PD S I
Sbjct: 276 AKILFDKM----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
A++G+++ A S+Y+ +R D SALI M+ G+ + V+
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT----LDR 387
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
++V ++ ++ G RAR+A ++Y M + G PN T+ LL A + + +
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
M + + + Y + D+ G+ D+A ++ M QP + +L++
Sbjct: 448 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP----VQPGVTVWGALLSACKK 503
Query: 435 MGKVTEAEALLNEMIRCGFEP-NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
V E ++ +P N L +LY A+ D V ++ ++ + G++ D
Sbjct: 504 HRHVELGEYAAQQLF--SIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKD 559
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVPHKAVEWF 234
++L+N + + + A +F EM+ + V+P+ I+ ++ + ACA S+ +A +
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE-QARSMY 346
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
E + + D +S+++I ++A+ G+V+ A ++DR D V +SA+I YG+
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLH 402
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G +S+Y M+ G PN VT+ LL A + R+ + M + +P Y
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHY 462
Query: 355 AALLQAYCRARCSEDALSVYKEM 377
A ++ RA + A V K M
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCM 485
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 137/324 (42%), Gaps = 11/324 (3%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
V + N + L+ + + G A +F+ + + +++++ +V+ + P +A+E F
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+M + +PD S++ + + ++ S++ ++ +L MY G
Sbjct: 212 QMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCG 271
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
++ MK PN++ +N ++ + AR+A ++ EM+ P+ +
Sbjct: 272 QVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
+ + A + E A S+Y+ + D + + L DM A G+ + A +F
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF-----D 382
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
D ++++I Y G+ EA +L M R G PN + L+ + +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 476 VVKIFNQLLDLGISPDDRFCDCLL 499
FN++ D I+P + C++
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVI 466
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 26/351 (7%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTC------- 224
P R +V + + + + + A ++F +M + VKP+ + +++ A TC
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN-AFTCLQDLKQG 241
Query: 225 SVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
H +V KM E EPD L S+ +YA+ G V A L+D+ K+ + + +
Sbjct: 242 RSIHASV---VKM-GLEIEPD--LLISLNTMYAKCGQVATAKILFDKMKSP----NLILW 291
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+A+I Y +G + ++ +M +P+ ++ + + A + A+++YE + +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
+ + + +AL+ + + E A V+ ++ D D V+++ + G A E
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVF----DRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
A+ ++ M+ G P++ T+ L+ + G V E N M P ++
Sbjct: 408 AISLYRAMERGG-VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVI 466
Query: 465 HLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
L G+A D ++ + + P LL + ELG+ A
Sbjct: 467 DLLGRAGHLDQAYEVIKC---MPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 132/297 (44%), Gaps = 13/297 (4%)
Query: 196 EKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYV 255
+++ +L G++ + + L+ +S+ A + F+ +P + P + ++I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWN----AIIRG 93
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPN 315
Y+R + AL +Y + + D+ F L+K + V++ + LG +
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+ N L+ + +R A+T++E + ++ A++ AY + +AL ++
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG-DCQPDNFTYTSLINMYSC 434
+M++ D V + + + + I A + G + +PD SL MY+
Sbjct: 212 QMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD--LLISLNTMYAK 269
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
G+V A+ L ++M PN++ +++ Y K A + + +F+++++ + PD
Sbjct: 270 CGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 162/375 (43%), Gaps = 39/375 (10%)
Query: 127 QQVSEMLVKGLGENVTEREAMIVLDNMV--------NPETALLAFEYFKQKIKPARHVVL 178
+Q+ ML+K E IVL N + N E + L F+Y + K ++V
Sbjct: 336 RQIHGMLIK------NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK-----NIVC 384
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
+N L + KD LF +MLQ G +P TFST A S C + + +
Sbjct: 385 WNALLSGYAN-KDGPICLSLFLQMLQMGFRPTEYTFST--ALKSCCVTELQQLH--SVIV 439
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
E +D + +S++ YA+ ++ AL L D A V + + +Y G Y
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP---TSVVPLNIVAGIYSRRGQYH 496
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ + S ++ +P+ V++N + A R+ + +++ M+++ P+ T+ ++L
Sbjct: 497 ESVKLISTLE----QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL 552
Query: 359 QAYCRARCSEDALSVYKEM--KEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+ C C S + K D + N+L DM G+ MK+F + +
Sbjct: 553 -SLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR--- 608
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
+ + T+T+LI+ G EA E + GF+P+ ++ S++ +
Sbjct: 609 --EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 477 VKIFNQLLDLGISPD 491
+ +F ++ D G+ P+
Sbjct: 667 MGLFQKMKDYGVEPE 681
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 20/332 (6%)
Query: 161 LAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
LA + F Q P R+ V +N +K + + D +A +F EM G PN T S L++C
Sbjct: 67 LAGKVFDQM--PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC 124
Query: 221 ASTCSVPHKAVEWFE-KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRA---KTEK 276
AS + K F D + ++ +Y R+ ++MA +++ E
Sbjct: 125 ASLDVRAGTQLHGLSLKYGLF--MADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET 182
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
W + ++ + G G C+ + ++ +GA ++ +L + K +K
Sbjct: 183 W-------NHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK 235
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
++ K G +L+ AY +C ++ + M + D V +N +
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAY--GKCGNTHMA--ERMFQDAGSWDIVSWNAIICAT 291
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
A N +A+K+F M G P+ TY S++ + S + ++ + +I+ G E
Sbjct: 292 AKSENPLKALKLFVSMPEHGF-SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETG 350
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDLGI 488
I+ +L+ Y K +D F+ + D I
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 142/347 (40%), Gaps = 43/347 (12%)
Query: 89 WVNPRSPRAKQLLKKSYAATSSPLE-KLAKSLDSCNPTEQQ----------------VSE 131
+ N P L + P E + +L SC TE Q V
Sbjct: 392 YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLS 451
Query: 132 MLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKD 191
L++ +N +A+++LD P + VV N+ ++
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTS-----------------VVPLNIVAGIYSRRGQ 494
Query: 192 FGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSAS 251
+ + KL + Q P+ ++++ +A S + +E F+ M PD S
Sbjct: 495 YHESVKLISTLEQ----PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVS 550
Query: 252 MIYVYARIGNVDMALSLYDR-AKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
++ + +++ ++ + S++ KT+ DT + LI MYG G+ + + V+ + +
Sbjct: 551 ILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-- 608
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
+ N++T+ L+ +G ++A ++E + GF P+ ++ ++L A ++
Sbjct: 609 --EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGD 417
+ ++++MK+ G + + Y D+ A G EA + +M D
Sbjct: 667 MGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPAD 713
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 39/253 (15%)
Query: 259 IGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVT 318
+ ++D++ L+ A + + ++LI YG GN ++ D ++V+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD----AGSWDIVS 283
Query: 319 YNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMK 378
+N ++ A +++ A ++ M ++GFSPN TY ++L + ++ +
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 379 EKGKDVDKVLYNMLFDMCAHFGNADEA------------------------------MKI 408
+ G + VL N L D A GN +++ + +
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSL 403
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
F M G +P +T+++ + SC VTE + L + ++R G+E N L+SL+ Y
Sbjct: 404 FLQMLQMGF-RPTEYTFSTALK--SCC--VTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 469 KAKRADDVVKIFN 481
K + +D + + +
Sbjct: 459 KNQLMNDALLLLD 471
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 204 QRGV---KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIG 260
Q+G+ +P + S L C S ++ H V +P + + +S+ ++ +YA G
Sbjct: 84 QKGISLTEPEIFA-SLLETCYSLRAIDH-GVRVHHLIPPYLLRNNLGISSKLVRLYASCG 141
Query: 261 NVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYN 320
++A ++DR K A+++LI Y G Y+ +++Y M G KP+ T+
Sbjct: 142 YAEVAHEVFDR--MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFP 199
Query: 321 NLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEK 380
+L A G + + I+ ++VK GF + AL+ Y + A +V+ + K
Sbjct: 200 RVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK 259
Query: 381 GKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
D V +N + H G EA+ IF M +G +PD +S++ + +
Sbjct: 260 ----DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNG-IEPDKVAISSVL---ARVLSFKH 311
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
L +IR G E + +L+ LY K + IF+Q+L+
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 163/360 (45%), Gaps = 22/360 (6%)
Query: 159 ALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-STL 217
A +A E F + K +N + + E+ + A L+ +M + GVKP+ TF L
Sbjct: 143 AEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVL 202
Query: 218 VACASTCSVP-HKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEK 276
AC SV +A+ F D + +++ +YA+ G++ A +++D +
Sbjct: 203 KACGGIGSVQIGEAIHRDLVKEGFGY--DVYVLNALVVMYAKCGDIVKARNVFDMIPHK- 259
Query: 277 WRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAK 336
D V++++++ Y G L ++ M G +P+ V +++L R + +
Sbjct: 260 ---DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGR 313
Query: 337 TIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMC 396
++ +++ G AL+ Y + A ++ +M E+ D V +N + +
Sbjct: 314 QLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLER----DTVSWNAI--IS 367
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR-CGFEP 455
AH N++ +K F M + + +PD T+ S++++ + G V + E L + M + G +P
Sbjct: 368 AHSKNSN-GLKYFEQMHRA-NAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 456 NILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGKITA 515
+ +V+LYG+A ++ + Q ++G+ LLY ++G++ A
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQ--EMGLEAGPTVWGALLYACYLHGNTDIGEVAA 483
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 147/358 (41%), Gaps = 50/358 (13%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLS 249
K F +++ +L+ G +L ++L++ A + F+K P D
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP----HRDVVSY 203
Query: 250 ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKV 309
++I YA G ++ A L+D + D V+++A+I Y +GNY L ++ DM
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 310 LGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSE- 368
+P+ T ++ A ++ + ++ + +GF N AL+ Y ++C E
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY--SKCGEL 317
Query: 369 --------------------------------DALSVYKEMKEKGKDVDKVLYNMLFDMC 396
+AL +++EM G+ + V + C
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 397 AHFGNADEA--MKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFE 454
AH G D + ++ D + G + TSLI+MY+ G + A + N ++
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLR-TSLIDMYAKCGDIEAAHQVFNSIL----H 432
Query: 455 PNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
++ + +++ + RAD +F+++ +GI PDD LL + +LG+
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLV-ACASTCSVP-HK 229
P + VV +N + + E ++ A +LF +M++ V+P+ T T+V ACA + S+ +
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 230 AVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
V + F + + ++I +Y++ G ++ A L++R + D ++++ LI
Sbjct: 287 QVHLWIDDHGF--GSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIG 340
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA---MGRAKRARDAKTIYEEMVKNG 346
Y Y L ++ +M G PN VT ++L A +G R ++ +K G
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK-G 399
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
+ +L+ Y + E A V+ + K M+F H G AD +
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA---MIFGFAMH-GRADASF 455
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR 450
+F+ M+ G QPD+ T+ L++ S G + + M +
Sbjct: 456 DLFSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
A S LI+ +S +++ S K + +PN++ +N + + A +Y M
Sbjct: 67 ALSKLIEFCILSPHFEGLPYAISVFKTI-QEPNLLIWNTMFRGHALSSDPVSALKLYVCM 125
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
+ G PN T+ +L++ +++ ++ ++ + + G D+D ++ L M G
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 403 DEAMKIFADMKSSGDCQP--DNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
++A K+F D P D +YT+LI Y+ G + A+ L +E+ ++++
Sbjct: 186 EDAHKVF-------DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV----KDVVSW 234
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLYVATQIPRQELGK 512
+++ Y + + +++F ++ + PD+ ++ Q ELG+
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 144/324 (44%), Gaps = 18/324 (5%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R V+ +N L+ + I D E++FD+M +R N+ +++ L+ + + +
Sbjct: 117 PCRDVMSWNTVLEGYANIGDMEACERVFDDMPER----NVFSWNGLIKGYAQNGRVSEVL 172
Query: 232 EWFEKM-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW-RVDTVAFSALIK 289
F++M P+D ++ A++G D ++ +T + +VD +ALI
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALID 232
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
MYG G + + V+ +K + +++++N ++ + +A ++ EM +G SP
Sbjct: 233 MYGKCGAIEIAMEVFKGIK----RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISP 288
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLY-NMLFDMCAHFGNADEAMKI 408
+ T+ +L A ED L+ + M + ++ + + D+ + G +A++
Sbjct: 289 DKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEF 348
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP-NILALTSLVHLY 467
M + D + +L+ KV E L E+I+ EP N L ++Y
Sbjct: 349 INKMP----VKADAVIWATLLGASKVYKKVDIGEVALEELIK--LEPRNPANFVMLSNIY 402
Query: 468 GKAKRADDVVKIFNQLLDLGISPD 491
G A R DD ++ + D G +
Sbjct: 403 GDAGRFDDAARLKVAMRDTGFKKE 426
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 24/308 (7%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY 254
A K+F EM+++ N++ +++++ A +F+ P E D L +MI
Sbjct: 47 ANKVFCEMVEK----NVVLWTSMINGYLLNKDLVSARRYFDLSP----ERDIVLWNTMIS 98
Query: 255 VYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP 314
Y +GN+ A SL+D+ D ++++ +++ Y G+ +AC V+ DM +
Sbjct: 99 GYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACERVFDDM----PER 150
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG-FSPNWPTYAALLQAYCRARCSEDALSV 373
N+ ++N L+ + R + ++ MV G PN T +L A + + V
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 374 YKEMKEKGKD-VDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
+K + G + VD + N L DM G + AM++F +K + D ++ ++IN
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-----RRDLISWNTMINGL 265
Query: 433 SCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLL-DLGISPD 491
+ G TEA L +EM G P+ + ++ +D + FN + D I P+
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 492 DRFCDCLL 499
C C++
Sbjct: 326 IEHCGCVV 333
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 127/302 (42%), Gaps = 36/302 (11%)
Query: 179 YNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP 238
YN+ + + ++ + EK+ EM++ G P+ +++S L+
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG------------------ 299
Query: 239 SFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYD 298
R G ++ ++ ++D K + D ++A+I + + ++D
Sbjct: 300 -----------------LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 299 ACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALL 358
+ Y M +PN+ TY+ L+ + + ++ DA I+EEM+ G P + L
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 359 QAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDC 418
+ C A+ +Y++ ++ G + + Y +L + FG + ++ +M+ SG
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG-Y 461
Query: 419 QPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVK 478
D Y +++ +G + A ++ E +R GF PN + L + + + K
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYK 521
Query: 479 IF 480
+F
Sbjct: 522 LF 523
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G ++ +Y+ +L A+GR K + + MV G +P+ + ++ R A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
+ +++E + G +N L + A +F K G+ D+ +Y +I+
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNIMIS 263
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
+S +G+V E E +L EM+ GF P+ L+ + L+ G+ R +D V+IF+ + G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 491 D 491
D
Sbjct: 324 D 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 256 YARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKP- 314
+ R+ V A+ L++ +++ + T +F+AL++ + A SV++ K G P
Sbjct: 196 FVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPF 253
Query: 315 NMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVY 374
+ +YN ++ + + + + +EMV++GF P+ +Y+ L++ R D++ ++
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
+K KG D +YN + + DE+M+ + M +C+P+ TY+ L++
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDE-ECEPNLETYSKLVSGLIK 372
Query: 435 MGKVTEAEALLNEMIRCGFEPNILALTSLV 464
KV++A + EM+ G P +TS +
Sbjct: 373 GRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 133 LVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDF 192
L++GLG +++ + DN+ + K + A +YN + F +DF
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKH-----------KGNVPDAN---VYNAMICNFISARDF 341
Query: 193 GRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASM 252
+ + + ML +PNL T+S LV+ A+E FE+M S P L S
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ G A+ +Y +++ R+ A+ L+K G L+V+ +M+ G
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
++ Y ++ + +A + EE ++ GF PN Y+ L + +E A
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYK 521
Query: 373 VYKEMKE 379
++ ++K+
Sbjct: 522 LFLKIKK 528
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 2/212 (0%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D ++S +++ G + + V M G P++ + + R R A ++
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
EE G + ++ ALL+ C A SV+ K+ D YN++ +
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKL 268
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G +E K+ +M SG PD +Y+ LI G++ ++ + + + G P+
Sbjct: 269 GEVEEMEKVLKEMVESG-FGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANV 327
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
+++ + A+ D+ ++ + ++LD P+
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPN 359
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 23/323 (7%)
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC---ASTCSVPHKAV- 231
VV + + + EI++ A K+FDEM G++PN +T S L+ K +
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
Query: 232 EWFEKM-----PSFECEPDDNLSASMIY--VYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
E +E M S + NL SM + I + +SL + E A+
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE------FAY 310
Query: 285 SALI-KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMV 343
+I + N+ A VY MK G KP +YN +++ + + A + EE
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYI-MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 344 KNGFSPNWPTYAALLQAYCRARCSEDALSVYKEM-KEKGKDVDKVLYNMLFDMCAHFGNA 402
+ F P+ TY L+++ C+ + A +V + M +++G D ++ YN+ N
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRI-YNIYLRGLCVMDNP 428
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGF-EPNILALT 461
E + + M GDC+PD +T ++IN MG+V +A +L++M+ F P+ + L
Sbjct: 429 TEILNVLVSM-LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 462 SLVHLYGKAKRADDVVKIFNQLL 484
+++ RA++ + + N+++
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVM 510
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 23/241 (9%)
Query: 122 CNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNV 181
C P E ++ ++ GL + +AM VLD+M+ K V L V
Sbjct: 443 CRPDEYTLN-TVINGLCKMGRVDDAMKVLDDMMTG------------KFCAPDAVTLNTV 489
Query: 182 TLKLFREIKDFGRAEKLFDE----MLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
L + GRAE+ D M + +KP ++ ++ ++ +A+ F ++
Sbjct: 490 MCGLLAQ----GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
D A +I VDMA +D R D ++A +K SG
Sbjct: 546 EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYL 605
Query: 298 -DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAA 356
DAC +Y D+ GA PN+V YN ++ R+ R+A I EEM KNG +P+ T+
Sbjct: 606 SDACHFLY-DLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRI 664
Query: 357 L 357
L
Sbjct: 665 L 665
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
+YN+ L+ + + + MLQ +P+ T +T++ A++ + M
Sbjct: 414 IYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM 473
Query: 238 PSFE-CEPDD-NLSASMIYVYARIGNVDMALSLYDRAKTE-KWRVDTVAFSALIKMYGMS 294
+ + C PD L+ M + A+ G + AL + +R E K + VA++A+I+
Sbjct: 474 MTGKFCAPDAVTLNTVMCGLLAQ-GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKL 532
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
D +SV+ ++ + TY ++ + + AK +++++ + Y
Sbjct: 533 HKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVY 592
Query: 355 AALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKS 414
AA L+ C++ DA ++ + G + V YN + C+ G EA +I +M+
Sbjct: 593 AAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRK 652
Query: 415 SGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
+G PD T+ L ++ M E E + N
Sbjct: 653 NGQ-APDAVTWRILDKLHDSMDLTVERELISN 683
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 12/223 (5%)
Query: 263 DMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNL 322
D S+ DRA WR + A+ + N D L + + + G +P+ + +++
Sbjct: 46 DRRRSVTDRAY---WRRRIHSICAVRR------NPDEALRILDGLCLRGYRPDSLNLSSV 96
Query: 323 LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGK 382
++++ A R +A + + +GF P+ T ++ +R L V + K
Sbjct: 97 IHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKK 156
Query: 383 DVDKVL--YNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTE 440
+ L YN L + +A K+ DM++ G PD T+T+LI Y + ++
Sbjct: 157 EFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHL-PDVVTFTTLIGGYCEIRELEV 215
Query: 441 AEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
A + +EM CG PN L L+ L+ + K + + K+ +L
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 119/305 (39%), Gaps = 42/305 (13%)
Query: 191 DFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSA 250
D G+A + + ML++ ++ + P + + M +C PD+
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
++I ++G VD A+ + D T K+
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKF--------------------------------- 478
Query: 311 GAKPNMVTYNNL---LYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
P+ VT N + L A GRA+ A D + M +N P Y A+++ +
Sbjct: 479 -CAPDAVTLNTVMCGLLAQGRAEEALD--VLNRVMPENKIKPGVVAYNAVIRGLFKLHKG 535
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK-SSGDCQPDNFTYT 426
++A+SV+ ++++ D Y ++ D D A K + D+ SG + D F Y
Sbjct: 536 DEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSG--RHDAFVYA 593
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+ + G +++A L ++ G PN++ +++ ++ + +I ++
Sbjct: 594 AFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN 653
Query: 487 GISPD 491
G +PD
Sbjct: 654 GQAPD 658
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 145/316 (45%), Gaps = 14/316 (4%)
Query: 175 HVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWF 234
H+VL + ++ E AE +FD M ++ N+I++++++A + A+E F
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEK----NVISWNSIIAAYVQNGKNYSALELF 419
Query: 235 EKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMS 294
+++ PD AS++ YA ++ ++ ++ +T+ ++L+ MY M
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC 479
Query: 295 GNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
G+ + ++ + + ++V++N+++ A R + ++ EM+ + +PN T+
Sbjct: 480 GDLEDARKCFNHILL----KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 355 AALLQAYCRARCSEDALSVYKEMK-EKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMK 413
A+LL A + ++ ++ MK E G D Y + D+ GN A + +M
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 414 SSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRA 473
P + SL+N +T AE ++ + + N L+++Y +A R
Sbjct: 596 ----FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD-NTGCYVLLLNMYAEAGRW 650
Query: 474 DDVVKIFNQLLDLGIS 489
+DV +I + GIS
Sbjct: 651 EDVNRIKLLMESKGIS 666
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPN-LITFSTLVACASTCSVPHKA 230
P R +V +N + + + D + LF EML+ G KP+ T S L AC+ S P
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS-PKMG 250
Query: 231 VEWFEKMPSFECEPDDNLS-ASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIK 289
E E D + S++ +Y++ G V A +++ + VA++ +I
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR----NIVAWNVMIG 306
Query: 290 MYGMSGNY-DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
Y +G DA L + G +P+++T NLL A + +TI+ ++ GF
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL----PASAILEGRTIHGYAMRRGFL 362
Query: 349 PNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKI 408
P+ AL+ Y + A ++ M EK + + +N + G A+++
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEK----NVISWNSIIAAYVQNGKNYSALEL 418
Query: 409 FADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
F ++ S PD+ T S++ Y+ ++E + +++ + N + L SLVH+Y
Sbjct: 419 FQELWDS-SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 469 KAKRADDVVKIFNQLL 484
+D K FN +L
Sbjct: 478 MCGDLEDARKCFNHIL 493
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 50/264 (18%)
Query: 265 ALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLY 324
AL L+D E + D ++ +IK + G Y + YS M G K + TY ++
Sbjct: 83 ALQLFD----EMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 325 AMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDV 384
++ + K I+ ++K GF + +L+ Y + C+ DA V++EM E+
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER---- 194
Query: 385 DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFT-------------------- 424
D V +N + G+ ++ +F +M G +PD F+
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 425 ----------------YTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYG 468
TS+++MYS G+V+ AE + N MI + NI+A ++ Y
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI----QRNIVAWNVMIGCYA 309
Query: 469 KAKRADDVVKIFNQLLDL-GISPD 491
+ R D F ++ + G+ PD
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPD 333
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 131/309 (42%), Gaps = 13/309 (4%)
Query: 178 LYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKM 237
L+NV +K F + A + + M+ GVK + T+ ++ + S + + +
Sbjct: 97 LWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMV 156
Query: 238 PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNY 297
D + S+I +Y ++G A +++ D V+++++I Y G+
Sbjct: 157 IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER----DIVSWNSMISGYLALGDG 212
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGF-SPNWPTYAA 356
+ L ++ +M G KP+ + + L A + K I+ V++ + + +
Sbjct: 213 FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTS 272
Query: 357 LLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSG 416
+L Y + A ++ M ++ + V +N++ A G +A F M
Sbjct: 273 ILDMYSKYGEVSYAERIFNGMIQR----NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 417 DCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV 476
QPD T +L+ + + E + +R GF P+++ T+L+ +YG+ +
Sbjct: 329 GLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSA 384
Query: 477 VKIFNQLLD 485
IF+++ +
Sbjct: 385 EVIFDRMAE 393
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 139/321 (43%), Gaps = 40/321 (12%)
Query: 195 AEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMP-SFECEPDDNLSASMI 253
A ++FDE+ KP+++T+S++V+ P++AVE+F +M + + PD +++
Sbjct: 115 ALRMFDEL----EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLV 170
Query: 254 YVYARIGN----------------------VDMALSLYDRAKTEKWRV---------DTV 282
++ N V+ L+ Y +++ K V D +
Sbjct: 171 SACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVI 230
Query: 283 AFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
++S +I Y +G L V++DM G +PN+ T +L A A + +E
Sbjct: 231 SWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA 290
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
++ G AL+ Y + E+A +V+ + K D V + L G A
Sbjct: 291 IRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK----DVVSWVALISGFTLNGMA 346
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTS 462
+++ F+ M + +PD ++ S +G + +A+ + +I+ GF+ N S
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 463 LVHLYGKAKRADDVVKIFNQL 483
LV LY + + K+FN +
Sbjct: 407 LVELYSRCGSLGNASKVFNGI 427
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 139/313 (44%), Gaps = 13/313 (4%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFST-LVACASTCSVPH-KAV 231
R + +N LK K + F M + KP+ T L AC V + + +
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
F K D + +S+IY+Y + G + AL ++D E + D V +S+++ +
Sbjct: 83 HGFVK-KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD----ELEKPDIVTWSSMVSGF 137
Query: 292 GMSGNYDACLSVYSDMKVLG-AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPN 350
+G+ + + M + P+ VT L+ A + +R + ++ +++ GFS +
Sbjct: 138 EKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSND 197
Query: 351 WPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA 410
+LL Y ++R ++A++++K + EK D + ++ + G A EA+ +F
Sbjct: 198 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEK----DVISWSTVIACYVQNGAAAEALLVFN 253
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA 470
DM G +P+ T ++ + + + IR G E + T+LV +Y K
Sbjct: 254 DMMDDG-TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 471 KRADDVVKIFNQL 483
++ +F+++
Sbjct: 313 FSPEEAYAVFSRI 325
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 49/298 (16%)
Query: 198 LFDEMLQRGVKPNLIT-FSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
+F++M+ G +PN+ T L ACA+ + + + E E + +S +++ +Y
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDL-EQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG-AKPN 315
+ + + A +++ R R D V++ ALI + ++G + +S M + +P+
Sbjct: 310 MKCFSPEEAYAVFSRIP----RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 316 MVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYK 375
+ +L + AK + ++K GF N A+L++ Y R
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSR------------ 413
Query: 376 EMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM 435
C GNA K+F +G D +TSLI Y
Sbjct: 414 --------------------CGSLGNAS---KVF-----NGIALKDTVVWTSLITGYGIH 445
Query: 436 GKVTEAEALLNEMIRCG-FEPNILALTSLVHLYGKAKRADDVVKIFNQLL-DLGISPD 491
GK T+A N M++ +PN + S++ A + ++IF ++ D ++P+
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPN 503
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 145/353 (41%), Gaps = 38/353 (10%)
Query: 173 ARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVE 232
A + V+YN L + GRA L EM + PN +TF+ L++ +++
Sbjct: 214 APNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMV 269
Query: 233 WFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYG 292
EK S PD ++ V G V AL + +R +++ +VD VA + L+K Y
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWP 352
G + +M+ G PN+ TYN L+ A + +M + N+
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 353 TYAALLQAYCRARCSEDALSVYKEMKEK----GKDVDK---VLYNM------------LF 393
T+ L++ ++D L + + M++ G +D V+Y L
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 394 DMCAHFGNA-DEAMKIFA--------DMKSSGDCQ------PDNFTYTSLINMYSCMGKV 438
M F A D + K+ + D+K++ D P LI+ YS GK+
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 439 TEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
E+ L+N+M+ G+ P +++ + K + + +K + + G PD
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPD 562
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 150/385 (38%), Gaps = 54/385 (14%)
Query: 149 VLDNMVNPETALLAFEYFKQKIKPAR---HVVLYNVTLKLFREIKDFGRAEKLFDEMLQR 205
+LD +V E +A E+F +K+ + V Y + +K G KL M
Sbjct: 153 ILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTS 211
Query: 206 GVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMA 265
GV PN + ++TL+ +A +M EP+D +I Y + +
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQS 267
Query: 266 LSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYA 325
+ L ++ + + D V + ++++ G L V ++ G K ++V N L+
Sbjct: 268 MVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKG 327
Query: 326 MGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVD 385
+ R A+ + EM + G+ PN TY L+ YC + AL + +MK +
Sbjct: 328 YCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWN 387
Query: 386 KVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCM---------- 435
+N L + G D+ +KI M+ S + + + I+ Y+C+
Sbjct: 388 FATFNTLIRGLSIGGRTDDGLKILEMMQDS------DTVHGARIDPYNCVIYGFYKENRW 441
Query: 436 ------------------------------GKVTEAEALLNEMIRCGFEPNILALTSLVH 465
G + + + ++MI G P+I+ L+H
Sbjct: 442 EDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 466 LYGKAKRADDVVKIFNQLLDLGISP 490
Y + + ++ +++ N ++ G P
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLP 526
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 96/220 (43%), Gaps = 5/220 (2%)
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
D F +I+ +G + +SV + G KP++ +N++L + + +
Sbjct: 111 DDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFT 170
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
+M+ +G + TY L++ D + + MK G + V+YN L
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILA 459
G A + ++MK +P++ T+ LI+ Y K+ ++ LL + GF P+++
Sbjct: 231 GKVGRARSLMSEMK-----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 460 LTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
+T ++ + R + +++ ++ G D C+ L+
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLV 325
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 43/327 (13%)
Query: 141 VTEREAMIVLDNMVNPETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFD 200
VT + M VL N AL E + K VV N +K + + A++ F
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKV-DVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 201 EMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIG 260
EM ++G PN+ T++ L+A + A++ F M + + ++I + G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 261 NVDMALSL----------------------YDRAKTEKWRVDTVAFSALIKMYGM----- 293
D L + Y K +W D + F L+KM +
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWE-DALEF--LLKMEKLFPRAV 459
Query: 294 -----------SGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEM 342
G D + Y M G P+++ + L++ + + ++ + +M
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
V G+ P T+ A++ +C+ + + ++M E+G D YN L + G+
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLI 429
+A +F+ M PD ++SL+
Sbjct: 580 QKAWLLFSRMVEK-SIVPDPSMWSSLM 605
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 29/310 (9%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITF-S 215
+ AL FE FK++ V ++ + KD A +LF EM GVKPN +T S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPS 393
Query: 216 TLVACASTCSVPH-KAVEWFEKMPSFECEPDDNL--SASMIYVYARIGNVDMALSLYDRA 272
L AC + ++ H ++ F + DN+ +++I +YA+ G ++++ +++
Sbjct: 394 MLPACGNIAALGHGRSTHGF----AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 273 KTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRA 332
T+ + V +++L+ + M G +S++ + KP+ +++ +LL A G+
Sbjct: 450 PTK----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 333 RDAKTIYEEMVKN-GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNM 391
+ ++ M + G P Y+ ++ RA ++A + KEM + D ++
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGA 562
Query: 392 LFDMCAHFGNAD----EAMKIFADMKSSGDCQPDN-FTYTSLINMYSCMGKVTEAEALLN 446
L + C N D A K+F +P+N TY L N+Y+ G TE +++ N
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLF-------HLEPENPGTYVLLSNIYAAKGMWTEVDSIRN 615
Query: 447 EMIRCGFEPN 456
+M G + N
Sbjct: 616 KMESLGLKKN 625
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 139/310 (44%), Gaps = 25/310 (8%)
Query: 190 KDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFEC----EPD 245
K F ++ +F M G+ P+ L + S A + +++ C + D
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS----AFKVGKQIHCVSCVSGLDMD 150
Query: 246 DNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYS 305
+ SM ++Y R G + A ++DR + D V SAL+ Y G + + + S
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILS 206
Query: 306 DMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRAR 365
+M+ G + N+V++N +L R+ ++A +++++ GF P+ T +++L + +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 366 CSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFA--DMKSSGDCQPDNF 423
++ + ++G DK + + + DM G+ + +F +M +G C
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN---- 322
Query: 424 TYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDV--VKIFN 481
Y + ++ + K E L E E N+++ TS++ G A+ D+ +++F
Sbjct: 323 AYITGLSRNGLVDKALEMFELFKEQT---MELNVVSWTSII--AGCAQNGKDIEALELFR 377
Query: 482 QLLDLGISPD 491
++ G+ P+
Sbjct: 378 EMQVAGVKPN 387
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNM 316
+R G VD AL +++ K + ++ V+++++I +G L ++ +M+V G KPN
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 317 VTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS--VY 374
VT ++L A G ++ + V+ N +AL+ Y A+C LS V+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMY--AKCGRINLSQIVF 446
Query: 375 KEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSC 434
M K + V +N L + + G A E M IF + + +PD ++TSL++
Sbjct: 447 NMMPTK----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-RLKPDFISFTSLLSACGQ 501
Query: 435 MGKVTEAEALLNEMI-RCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
+G E M G +P + + +V+L G+A + + + ++
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVY 256
++ EM G++ N+++++ +++ + +AV F+K+ PD +S++
Sbjct: 203 RILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSV 262
Query: 257 ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA---- 312
++M ++ + D SA+I MYG SG+ +S+++ +++ A
Sbjct: 263 GDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN 322
Query: 313 ---------------------------KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN 345
+ N+V++ +++ + + +A ++ EM
Sbjct: 323 AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKV-LYNMLFDMCAHFGNADE 404
G PN T ++L A S + + +D V + + L DM A G +
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLV 464
+ +F M + + + SL+N +S GK E ++ ++R +P+ ++ TSL+
Sbjct: 442 SQIVFNMMPTK-----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496
Query: 465 HLYGKAKRADDVVKIFNQLL-DLGISPDDRFCDCLL 499
G+ D+ K F + + GI P C++
Sbjct: 497 SACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV 532
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSV 373
P + ++++L+YA+ +AK + ++ M +G P+ L + C+E LS
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV-----CAE--LSA 131
Query: 374 YKEMKE-------KGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYT 426
+K K+ G D+D + +F M G +A K+F M D T +
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-----DVVTCS 186
Query: 427 SLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
+L+ Y+ G + E +L+EM G E NI++ ++ + ++ + V +F ++ L
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 487 GISPD 491
G PD
Sbjct: 247 GFCPD 251
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 244 PDDNLSASMIYVY---ARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDAC 300
PD + +++ Y R+ + L R D V ++ ++ + +G D
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 301 LSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-GFSPNWPTYAALLQ 359
V ++M +G N +TYN LL + + A+ + EM ++ G P+ +Y ++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 360 AYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQ 419
S AL+ + EM+ +G K+ Y L A G A ++F +M + +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 420 PDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKI 479
D + L+ Y +G + +A+ +++ M GF PN+ SL + +A++ D + +
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 480 FNQL 483
+ ++
Sbjct: 652 WKEI 655
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 23/281 (8%)
Query: 177 VLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFEK 236
V Y + F RA ++ EM + GV N IT++ L+ +A + +
Sbjct: 453 VTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
Query: 237 MPS-FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
M EPD +I I + AL+ ++ +T ++++ L+K + MSG
Sbjct: 513 MTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Query: 296 NYDACLSVYSDM-KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTY 354
V+ +M K +++ +N L+ R DA+ + M +NGF PN TY
Sbjct: 573 QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 355 AALLQAYCRARCSEDALSVYKEMKE----KGKDV---------------DKVLYNMLFDM 395
+L +AR DAL ++KE+KE K K+ D+ L + L D+
Sbjct: 633 GSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADI 692
Query: 396 CAHFGNADEAMKIFADMKSSGDCQPDNFTYTSL-INMYSCM 435
C +A++I A M+ +G P+ Y + + M+S M
Sbjct: 693 CVRAAFFKKALEIIACMEENG-IPPNKTKYKKIYVEMHSRM 732
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Query: 314 PNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN---GFSPNWPTYAALLQAYCRARCSEDA 370
P+ Y L+ + R D + E M + P+ TY ++ A+ A + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
V EM G +++ YN+L D A + +M +PD +Y +I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQLLD 485
+ A A NEM G P ++ T+L+ + + + ++F+++++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 323 LYAMGRAKRARD--AKTIYEEMVKNGFSPN---WPTYAALLQAYCRARCSEDA---LSVY 374
L AM AK + A ++ + M+++G+ P+ W A L A E +++
Sbjct: 158 LLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAIT 217
Query: 375 KEMKEKGKDV-------DKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
+ +K G D +N + + CA+ G+ D+ K+F +M S DC+PD TY
Sbjct: 218 RRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEM-SEWDCEPDVLTYNV 276
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLY---GKAKRADDVVKIFNQ 482
+I + + +G+ +L +I G + + + SLV Y G + A+ +V+ +
Sbjct: 277 MIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMRE 334
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 19/300 (6%)
Query: 195 AEKLFDEMLQRGVKPNLITF-STLVACASTCSVPH-KAVEWFEKMPSFECEPDDNLSASM 252
A KLF M G+KP+ T L AC+ C + K + F FE + ++
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE--RHLFATTAL 363
Query: 253 IYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGA 312
+ +YA+ G + A +D + D +++LI Y + + + L +Y MK G
Sbjct: 364 VDMYAKAGCLADARKGFDCLQER----DVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
PN T ++L A K ++ +K+GF P +AL Y + ED
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 373 VYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMY 432
V++ K D V +N + +H G DEA+++F +M + G +PD+ T+ ++I+
Sbjct: 480 VFRRTPNK----DVVSWNAMISGLSHNGQGDEALELFEEMLAEG-MEPDDVTFVNIISAC 534
Query: 433 SCMGKVTEAEALLNEMI-RCGFEPNILALTSLVHLY---GKAKRADDVVKIFNQLLDLGI 488
S G V N M + G +P + +V L G+ K A + ++ N +D G+
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN--IDHGL 592
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 136/293 (46%), Gaps = 19/293 (6%)
Query: 197 KLFDEMLQRGVKPNLITFSTLVACAST---CSVPHKAVEWFEKMPSFECEPDDNLSASMI 253
+LF EM + + PN T + + S+ +V +A KM SF D + S++
Sbjct: 104 QLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF---GDIYVDTSLV 160
Query: 254 YVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM---KVL 310
+Y + G V+ L ++ +T +S ++ Y G + + V++ K
Sbjct: 161 GMYCKAGLVEDGLKVFAYMPER----NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDA 370
G+ + V + +L ++ + I+ +KNG AL+ Y ++C ++
Sbjct: 217 GSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY--SKC--ES 271
Query: 371 LSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLIN 430
L+ +M + D + + ++ + + G + EA+K+F+ M S+G +P +T ++N
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG-IKPSEYTIVGVLN 330
Query: 431 MYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
S + + E + L + +++ GFE ++ A T+LV +Y KA D K F+ L
Sbjct: 331 ACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL 383
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 119/276 (43%), Gaps = 40/276 (14%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
LS +++ +Y++ +++ A ++D + +++ +SA++ Y +G + ++S M
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDR----NSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
G KP+ T +L A + K ++ ++K GF + AL+ Y +A C
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
DA + ++E+ D L+ L + +EA+ ++ MK++G P++ T S
Sbjct: 374 ADARKGFDCLQER----DVALWTSLISGYVQNSDNEEALILYRRMKTAG-IIPNDPTMAS 428
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKA----------------- 470
++ S + + + + I+ GF + ++L +Y K
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 471 --------------KRADDVVKIFNQLLDLGISPDD 492
+ D+ +++F ++L G+ PDD
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 288 IKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKN-G 346
I +Y + D L V+ D++ + + N LL+A AK ++AK +Y EM K G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 347 FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAM 406
P+ TY +++ +C + + + S+ EM+ KG + + ++ +DE
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 407 KIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHL 466
K+ A MK G TY I K EA+ALL+ M+ G +PN + + L+H
Sbjct: 243 KVLAMMKDRG-VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 467 YGKAKRADDVVKIFNQLLDLGISPDDRFCDCLLY 500
+ ++ K+F +++ G PD L+Y
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIY 335
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 23/284 (8%)
Query: 173 ARHVVLY------NVTLKLFREIKDFGRAEKLFDEMLQRGVKP-NLITFSTLVACASTCS 225
A +VLY + +L++FR+++ F + R VK N + F+ LVA
Sbjct: 120 AHAIVLYAQANMLDHSLRVFRDLEKFE---------ISRTVKSLNALLFACLVA-----K 165
Query: 226 VPHKAVEWFEKMPS-FECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF 284
+A + +MP + EPD MI V+ G+ + S+ + + + ++ +F
Sbjct: 166 DYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF 225
Query: 285 SALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVK 344
+I + D V + MK G + TYN + ++ + K++++AK + + M+
Sbjct: 226 GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS 285
Query: 345 NGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADE 404
G PN TY+ L+ +C E+A ++K M +G D Y L G+ +
Sbjct: 286 AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFET 345
Query: 405 AMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
A+ + + + P SL+N + KV EA+ L+ ++
Sbjct: 346 ALSLCKE-SMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 174 RHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEW 233
R+VV++N+ ++ F + D R LF +M +R ++++++++++ S C +A+E
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSER----SIVSWNSMISSLSKCGRDREALEL 221
Query: 234 FEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAF-SALIKMYG 292
F +M +PD+ +++ + A +G +D ++ A++ D + +AL+ Y
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 293 MSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNG-FSPNW 351
SG+ +A +++ M+ + N+V++N L+ + +++ M++ G +PN
Sbjct: 282 KSGDLEAATAIFRKMQ----RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNE 337
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGK-DVDKVLYNMLFDMCAHFGNADEAMKIFA 410
T+ +L E ++ M E+ K + Y + D+ + G EA K
Sbjct: 338 ATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLK 397
Query: 411 DMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEP-NILALTSLVHLYGK 469
+M + + + SL++ G V AE E+++ EP N L +LY +
Sbjct: 398 NMPVNANAA----MWGSLLSACRSHGDVKLAEVAAMELVK--IEPGNSGNYVLLSNLYAE 451
Query: 470 AKRADDVVKI 479
R DV K+
Sbjct: 452 EGRWQDVEKV 461
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 248 LSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDM 307
L A I + + N D A ++ + + + F+A+IK Y + G LS +S M
Sbjct: 38 LLAHFISICGSLSNSDYANRVFSHIQNP----NVLVFNAMIKCYSLVGPPLESLSFFSSM 93
Query: 308 KVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCS 367
K G + TY LL + R K ++ E+++ GF +++ Y
Sbjct: 94 KSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRM 153
Query: 368 EDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTS 427
DA V+ EM E+ + V++N++ G+ + + +F M + ++ S
Sbjct: 154 GDAQKVFDEMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQMS-----ERSIVSWNS 204
Query: 428 LINMYSCMGKVTEAEALLNEMIRCGFEPN 456
+I+ S G+ EA L EMI GF+P+
Sbjct: 205 MISSLSKCGRDREALELFCEMIDQGFDPD 233
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 136/343 (39%), Gaps = 76/343 (22%)
Query: 209 PNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIY-------------V 255
PN++ F+ ++ C S P +++ +F M S D+ A ++ V
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 256 YA-------------RIGNVDMALS---LYDRAKT--EKWRVDTVAFSALIKMYGMSGNY 297
+ RIG V++ S + D K E + V ++ +I+ + SG+
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDV 184
Query: 298 DACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA-- 355
+ L ++ M ++ ++V++N+++ ++ + R R+A ++ EM+ GF P+ T
Sbjct: 185 ERGLHLFKQM----SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240
Query: 356 ----------------------------------ALLQAYCRARCSEDALSVYKEMKEKG 381
AL+ YC++ E A +++++M+ +
Sbjct: 241 LPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR- 299
Query: 382 KDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEA 441
+ V +N L A G + + +F M G P+ T+ ++ S G+V
Sbjct: 300 ---NVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Query: 442 EALLNEMI-RCGFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
E L M+ R E ++V L ++ R + K +
Sbjct: 357 EELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 227 PHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSA 286
P E F KM E N + M ++ G AL L+ + K + D VA +A
Sbjct: 181 PKNLQEIFHKM---RTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTA 237
Query: 287 LIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGR-AKRARDAKTIYEEMVKN 345
+++ Y +G L V+ M G PN TY+ L+ + K +DAK EM+ N
Sbjct: 238 IVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN 297
Query: 346 GFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKG 381
G SPN TY A+ +A+ R E A + +EMK KG
Sbjct: 298 GMSPNAATYTAVFEAFVREGKEESARELLQEMKGKG 333
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 333 RDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNML 392
++ + I+ +M GF+ + A + + +AL ++ ++K+K + D V + +
Sbjct: 182 KNLQEIFHKMRTEGFTNEA---VKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAI 238
Query: 393 FDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKV-TEAEALLNEMIRC 451
+ A+ G A E +K+F M +SG P+ +TY+ LI + GK +A+ L EM+
Sbjct: 239 VEAYANAGQAKETLKVFMRMLASG-VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN 297
Query: 452 GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFC-DCLLYVATQIPR 507
G PN T++ + + + + ++ ++ G PD++ + L Y Q+ R
Sbjct: 298 GMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFR 354
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 313 KPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALS 372
+P TY LL +G++ + A+ +++EM++ G P Y ALL AY R+ +DA S
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 373 V------------------------------------YKEMKEKGKDVDKVLYNMLFDMC 396
+ YKEM E+ + V N++
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 397 AHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPN 456
G D+ K+ +DM S C+PD +T +++++ MGK+ E+ + G EP
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE 300
Query: 457 ILALTSLVHLYGKAKRADDVVKIFNQLLDL 486
L+ YGK + D + + + L
Sbjct: 301 TRTFNILIGSYGKKRMYDKMSSVMEYMRKL 330
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 154/397 (38%), Gaps = 26/397 (6%)
Query: 63 QPLNSQLDAKLDNPDAKSPPSSKSRIWVNPRSPRAKQLLKKSYAATSSPLEKLAKSLDSC 122
+P+N Q + N K SK+ WVN + L+ K + + + +
Sbjct: 62 EPVN-QRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFY 120
Query: 123 NPTEQQVSEMLVKGLGENVTEREAMIVLDNM--------VNPETALLA------------ 162
P E ++LV LG++ A + D M V TALLA
Sbjct: 121 QPKEGTYMKLLVL-LGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 163 --FEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVAC 220
+ K + V Y+ LK + F + L+ EM +R + PN +T + +++
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 221 ASTCSVPHKAVEWFEKM-PSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
+ + M S C+PD ++ V+ +G +DM S Y++ +
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+T F+ LI YG YD SV M+ L TYNN++ A A++ + +
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTF 359
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
++M G + T+ L+ Y A +S + + + YN + CA
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
+ E +++ MK C D+ T+ ++ Y G
Sbjct: 420 DDLIEMERVYIRMKER-QCVCDSRTFEIMVEAYEKEG 455
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 158/331 (47%), Gaps = 22/331 (6%)
Query: 164 EYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA--CA 221
E+F Q P R V + + ++ I + +A ++ +M++ G++P T + ++A A
Sbjct: 101 EFFDQL--PQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA 158
Query: 222 STCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDT 281
+ C K V F + + ++S S++ +YA+ G+ MA ++DR D
Sbjct: 159 TRCMETGKKVHSF--IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR----DI 212
Query: 282 VAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEE 341
+++A+I ++ G D ++ + M A+ ++VT+N+++ + A I+ +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQM----AERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 342 MVKNG-FSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFG 400
M+++ SP+ T A++L A ++ + G D+ ++ N L M + G
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 401 NADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILAL 460
+ A ++ + + + D + + F T+L++ Y +G + +A+ + + + +++A
Sbjct: 329 GVETARRLI-EQRGTKDLKIEGF--TALLDGYIKLGDMNQAKNIFVSLK----DRDVVAW 381
Query: 461 TSLVHLYGKAKRADDVVKIFNQLLDLGISPD 491
T+++ Y + + + +F ++ G P+
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 151/388 (38%), Gaps = 71/388 (18%)
Query: 140 NVTEREAMIVLDNMVNP-ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKL 198
+++ AMI L V + A+ FE + R +V +N + F + RA +
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAE-----RDIVTWNSMISGFNQRGYDLRALDI 265
Query: 199 FDEMLQRGV-KPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYA 257
F +ML+ + P+ T +++++ + + + + + + ++I +Y+
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 258 RIGNVDMALSLYDRAKTEKWRV-----------------------------DTVAFSALI 288
R G V+ A L ++ T+ ++ D VA++A+I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 289 KMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFS 348
Y G+Y ++++ M G +PN T +L K I+ VK+G
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 349 PNWPTYAALLQAYCRA-------------RC-------------------SEDALSVYKE 376
+ AL+ Y +A RC +E+AL +++
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 377 MKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMG 436
M +G D + Y +F C H G ++ + F MK P Y +++++ G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 437 KVTEAEALLNEMIRCGFEPNILALTSLV 464
+ EA+ + +M EP+++ SL+
Sbjct: 566 LLQEAQEFIEKM---PIEPDVVTWGSLL 590
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 108/265 (40%), Gaps = 43/265 (16%)
Query: 251 SMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVL 310
+++ Y++ G++D +D+ D+V+++ +I Y G Y + V DM
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 311 GAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSED- 369
G +P T N+L ++ + K ++ +VK G N +LL Y A+C +
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY--AKCGDPM 198
Query: 370 --------------------------------ALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
A++ +++M E+ D V +N +
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFN 254
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
G A+ IF+ M PD FT S+++ + + K+ + + + ++ GF+ +
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 458 LALTSLVHLYGKAKRADDVVKIFNQ 482
+ L +L+ +Y + + ++ Q
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQ 339
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 13/267 (4%)
Query: 252 MIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLG 311
MI Y R+G+ A L+D+ + V+++ +I Y ++G + + V+ +MK
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRS----VVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 312 AKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDAL 371
+PN VT ++L A+ R + ++ +G + +AL+ Y + E A+
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 372 SVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINM 431
V++ + + + + ++ + + A G A +A+ F M+ +G +P + Y +L+
Sbjct: 330 HVFERLPRE----NVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTA 384
Query: 432 YSCMGKVTEAEALLNEMIRC-GFEPNILALTSLVHLYGKAKRADDVVKIFNQLLDLGISP 490
S G V E ++M+ G EP I +V L G++ D+ + +L++ I P
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKP 441
Query: 491 DDRFCDCLLYVATQIPRQELGKITACI 517
DD LL E+GK A I
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANI 468
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 129/314 (41%), Gaps = 9/314 (2%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
P R VV + + + RA + F EM+++G PN T S+++ V
Sbjct: 72 PDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGA 131
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMY 291
+ E + +M+ +YA A L R K + V ++ LI +
Sbjct: 132 LVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK---NDVTWTTLITGF 188
Query: 292 GMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNW 351
G+ L +Y M + A+ + A K I+ ++K GF N
Sbjct: 189 THLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNL 248
Query: 352 PTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFAD 411
P ++L YCR +A + EM++K D + +N L ++ EA+ +F
Sbjct: 249 PVMNSILDLYCRCGYLSEAKHYFHEMEDK----DLITWNTLISELER-SDSSEALLMFQR 303
Query: 412 MKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAK 471
+S G P+ +T+TSL+ + + + + L + R GF N+ +L+ +Y K
Sbjct: 304 FESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCG 362
Query: 472 RADDVVKIFNQLLD 485
D ++F +++D
Sbjct: 363 NIPDSQRVFGEIVD 376
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/289 (17%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 162 AFEYFKQKIKPARHVVLYNVTL--KLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVA 219
+ +KQ + V Y +T+ + I +++ +++RG + NL ++++
Sbjct: 197 GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILD 256
Query: 220 CASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRV 279
C +A +F +M E D ++ + + + AL ++ R +++ +
Sbjct: 257 LYCRCGYLSEAKHYFHEM-----EDKDLITWNTLISELERSDSSEALLMFQRFESQGFVP 311
Query: 280 DTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIY 339
+ F++L+ + ++ + G N+ N L+ + D++ ++
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 340 EEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHF 399
E+V N ++ +++ Y +A+ ++ +M G D++++ + C H
Sbjct: 372 GEIVDR---RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 400 GNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEM 448
G ++ +K F M+S PD Y ++++ GK+ EA L+ M
Sbjct: 429 GLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 148/338 (43%), Gaps = 14/338 (4%)
Query: 151 DNMVNPETALLAFEYFKQK----IKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRG 206
D V ET ++ F + + P + VV YN + + + + A ++ EM
Sbjct: 178 DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 207 VKPNLITFSTLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMAL 266
+KP+ T S+++ S K E + + D + +S++ +YA+ ++ +
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 267 SLYDRAKTEKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAM 326
++ R D +++++L+ Y +G Y+ L ++ M KP V +++++ A
Sbjct: 298 RVFSRLYCR----DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 327 GRAKRARDAKTIYEEMVKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDK 386
K ++ +++ GF N +AL+ Y + + A ++ M +D+
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDE 409
Query: 387 VLYNMLFDMCAHFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLN 446
V + + A G+ EA+ +F +MK G +P+ + +++ S +G V EA N
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFN 468
Query: 447 EMIRC-GFEPNILALTSLVHLYGKAKRADDVVKIFNQL 483
M + G + ++ L G+A + ++ +++
Sbjct: 469 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 178/428 (41%), Gaps = 35/428 (8%)
Query: 61 SLQPLNSQLDAKLDNPDAKSPPSSKSRIWVNPRSPRAKQLLKKSYAATSSPLEKLAKSLD 120
S + NS ++ + D K S+ S + N P S + L++L+ L
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTF--PSLLKACASLQRLSFGL- 66
Query: 121 SCNPTEQQVSEMLVKGLGENVTEREAMIVLDNMVNPETALLA-----FEYFKQKIKPARH 175
QQV LV G + +++ L + LLA FE ++ R
Sbjct: 67 ---SIHQQV---LVNGFSSDFYISSSLVNL----YAKFGLLAHARKVFEEMRE-----RD 111
Query: 176 VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAVEWFE 235
VV + + + G A L +EM +G+KP +T +++ + + + F
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT-QLQCLHDFA 170
Query: 236 KMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFSALIKMYGMSG 295
+ F+C D + SM+ +Y + +V A L+D+ + D V+++ +I Y G
Sbjct: 171 VIYGFDC--DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVG 224
Query: 296 NYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSPNWPTYA 355
N L + M+ G +P+ T+ L G + ++ ++VK GF +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 356 ALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIFADMKSS 415
AL+ Y + E + V + + K D V + ++ G A++A+ +F++M S
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNK----DVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Query: 416 GDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGKAKRADD 475
G + S++ + +G ++ ++R G+ + AL SL+ +Y K D
Sbjct: 341 GS-DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 476 VVKIFNQL 483
+ IF ++
Sbjct: 400 SLVIFERM 407
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 157 ETALLAFEYFKQKIKPARHVVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKP--NLITF 214
+ +L+ FE + R +V +N + + + D +A LF+EM + V+ +
Sbjct: 398 DKSLVIFERMNE-----RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVV 452
Query: 215 STLVACASTCSVPHKAVEWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKT 274
S L AC+S ++P + + SF P + +++ +Y++ G ++ A +D +
Sbjct: 453 SLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFD---S 508
Query: 275 EKWRVDTVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARD 334
W+ D V++ LI YG G D L +YS+ G +PN V + +L + +
Sbjct: 509 ISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQ 567
Query: 335 AKTIYEEMVKN-GFSPNWPTYAALLQAYCRARCSEDALSVYKE 376
I+ MV++ G PN A ++ CRA+ EDA YKE
Sbjct: 568 GLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 149/321 (46%), Gaps = 27/321 (8%)
Query: 172 PARHVVLYNVTLKLFREIKDFGRAEK---LFDEMLQRGVKPNLITFSTLVA-CASTCSVP 227
P + VV + V + + GRAEK +F EMLQ G + +++VA CA S
Sbjct: 307 PNKDVVCWTV---MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 228 HKA-VEWFEKMPSFECE-PDDNLSASMIYVYARIGNVDMALSLYDRAKTEKWRVDTVAFS 285
A V + + + P N S+I +YA+ G++D +L +++R D V+++
Sbjct: 364 LGASVHGYVLRHGYTLDTPALN---SLITMYAKCGHLDKSLVIFERMNER----DLVSWN 416
Query: 286 ALIKMYGMSGNYDAC--LSVYSDMKVLGAKP-NMVTYNNLLYAMGRAKRARDAKTIYEEM 342
A+I G + N D C L ++ +MK + + T +LL A A K I+ +
Sbjct: 417 AIIS--GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIV 474
Query: 343 VKNGFSPNWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNA 402
+++ P AL+ Y + E A + + K D V + +L G
Sbjct: 475 IRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK----DVVSWGILIAGYGFHGKG 530
Query: 403 DEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIR-CGFEPNILALT 461
D A++I+++ SG +P++ + ++++ S G V + + + M+R G EPN L
Sbjct: 531 DIALEIYSEFLHSG-MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLA 589
Query: 462 SLVHLYGKAKRADDVVKIFNQ 482
+V L +AKR +D K + +
Sbjct: 590 CVVDLLCRAKRIEDAFKFYKE 610
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 151/372 (40%), Gaps = 18/372 (4%)
Query: 128 QVSEMLVKGLGENVTERE----AMIVLDNMV---------NPETALLAFEYFKQKIKPAR 174
+VS ++ KG ERE +++ DN V +P AL F + +
Sbjct: 199 EVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSG 258
Query: 175 H---VVLYNVTLKLFREIKDFGRAEKLFDEMLQRGVKPNLITFSTLVACASTCSVPHKAV 231
+ V YN L++ + DEM G +L T+ + + + V
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 232 EWFEKMPSFECEPDDNLSASMIYVYARIGNVDMALSLYDRAKTEKW--RVDTVAFSALIK 289
+ +E M +P + ++ + N D+ L K E + + + +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 290 MYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYEEMVKNGFSP 349
G +D + M+ G +P+ +TY+ L++ + +AKR +A+ + ++M G P
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFP 438
Query: 350 NWPTYAALLQAYCRARCSEDALSVYKEMKEKGKDVDKVLYNMLFDMCAHFGNADEAMKIF 409
+ T+ L+Q +C+ + AL+ + M EKG D+D L ++L D + A
Sbjct: 439 DIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFL 498
Query: 410 ADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNILALTSLVHLYGK 469
+M + + +P TY LI+ + K EA LL M + + A + +G
Sbjct: 499 MEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGT 558
Query: 470 AKRADDVVKIFN 481
+ A + + +
Sbjct: 559 LEDAKKFLDVLS 570
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 281 TVAFSALIKMYGMSGNYDACLSVYSDMKVLGAKPNMVTYNNLLYAMGRAKRARDAKTIYE 340
TV ++A +++ + SV +MK G ++ TY + +++ + +YE
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 341 EMVKNGFSPNWPTYAALLQAYCRARCSED---ALSVYKEMKEKGKDVDKVLYNMLFDMCA 397
M+ F P+ + LL+ Y + D V ++ + GK + K +Y+ +
Sbjct: 323 YMMDGPFKPSIQDCSLLLR-YLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLT 381
Query: 398 HFGNADEAMKIFADMKSSGDCQPDNFTYTSLINMYSCMGKVTEAEALLNEMIRCGFEPNI 457
G DEA +I M+++G +PDN TY+ L+ ++ EA +L++M G P+I
Sbjct: 382 SVGRFDEAEEITKAMRNAG-YEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDI 440
Query: 458 LALTSLVHLYGKAKRADDVVKIFNQLLDLGISPDDRFCDCLL 499
T L+ + K D + F +L+ G D D L+
Sbjct: 441 KTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLI 482