Miyakogusa Predicted Gene

Lj0g3v0055239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0055239.1 Non Chatacterized Hit- tr|F6GSN7|F6GSN7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.81,0.0000000000001,
,NODE_45536_length_2480_cov_24.141129.path1.1
         (472 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18270.2 | Symbols:  | ketose-bisphosphate aldolase class-II ...    76   6e-14
AT1G18270.1 | Symbols:  | ketose-bisphosphate aldolase class-II ...    76   6e-14
AT1G18270.3 | Symbols:  | ketose-bisphosphate aldolase class-II ...    76   6e-14

>AT1G18270.2 | Symbols:  | ketose-bisphosphate aldolase class-II
           family protein | chr1:6283634-6293772 REVERSE
           LENGTH=1374
          Length = 1374

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 12/139 (8%)

Query: 237 DKDNSTVVQNWEKTRWVNISDARTSYAYNPELLAYKFTTDSKTGRCSGFSGLGGVGFDLA 296
           D   +++ +  EK   V I +A     Y PE LA + TT +K     GF GLG +GF +A
Sbjct: 279 DDTATSLAKISEKVLGVGILEAANRELYKPEDLAKEITTQAKPVNRIGFIGLGAMGFGMA 338

Query: 297 TQLLSSYFFKVVYDVYESPLFRYANVGVLVMKSP-EVRKDVDVPMLLQLQAGFYACTQVV 355
             LL S F    YDVY+  L R+ N G L   SP EV KDVDV +++         T  V
Sbjct: 339 AHLLKSNFSVCGYDVYKPTLVRFENAGGLAANSPAEVTKDVDVLVIM--------VTNEV 390

Query: 356 LAEEMLRESWRHMTAIKVL 374
            AE++L   + H+ A++ +
Sbjct: 391 QAEDVL---YGHLGAVEAI 406


>AT1G18270.1 | Symbols:  | ketose-bisphosphate aldolase class-II
           family protein | chr1:6283634-6293772 REVERSE
           LENGTH=1373
          Length = 1373

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 12/139 (8%)

Query: 237 DKDNSTVVQNWEKTRWVNISDARTSYAYNPELLAYKFTTDSKTGRCSGFSGLGGVGFDLA 296
           D   +++ +  EK   V I +A     Y PE LA + TT +K     GF GLG +GF +A
Sbjct: 278 DDTATSLAKISEKVLGVGILEAANRELYKPEDLAKEITTQAKPVNRIGFIGLGAMGFGMA 337

Query: 297 TQLLSSYFFKVVYDVYESPLFRYANVGVLVMKSP-EVRKDVDVPMLLQLQAGFYACTQVV 355
             LL S F    YDVY+  L R+ N G L   SP EV KDVDV +++         T  V
Sbjct: 338 AHLLKSNFSVCGYDVYKPTLVRFENAGGLAANSPAEVTKDVDVLVIM--------VTNEV 389

Query: 356 LAEEMLRESWRHMTAIKVL 374
            AE++L   + H+ A++ +
Sbjct: 390 QAEDVL---YGHLGAVEAI 405


>AT1G18270.3 | Symbols:  | ketose-bisphosphate aldolase class-II
           family protein | chr1:6283634-6293772 REVERSE
           LENGTH=1393
          Length = 1393

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 211 AKWPPPEPPDCDVEGYYCIQRVLWLADKDNST-VVQNWEKTRWVNISDARTSYAYNPELL 269
           AK  P   P   V     I  +  +   D +T + +  EK   V I +A     Y PE L
Sbjct: 251 AKSLPFPVPLLAVARQQLISGISQMQGDDTATSLAKISEKVLGVGILEAANRELYKPEDL 310

Query: 270 AYKFTTDSKTGRCSGFSGLGGVGFDLATQLLSSYFFKVVYDVYESPLFRYANVGVLVMKS 329
           A + TT +K     GF GLG +GF +A  LL S F    YDVY+  L R+ N G L   S
Sbjct: 311 AKEITTQAKPVNRIGFIGLGAMGFGMAAHLLKSNFSVCGYDVYKPTLVRFENAGGLAANS 370

Query: 330 P-EVRKDVDVPMLLQLQAGFYACTQVVLAEEMLRESWRHMTAIKVL 374
           P EV KDVDV +++         T  V AE++L   + H+ A++ +
Sbjct: 371 PAEVTKDVDVLVIM--------VTNEVQAEDVL---YGHLGAVEAI 405