Miyakogusa Predicted Gene
- Lj0g3v0055089.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0055089.1 tr|A9SJK2|A9SJK2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_130931,40.87,1e-16,MYB_LIKE,Myb-like domain; seg,NULL;
coiled-coil,NULL; SANT SWI3, ADA2, N-CoR and TFIIIB''
DNA-bin,S,NODE_44413_length_2092_cov_34.403442.path1.1
(1788 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57578 similar to UniRef100_A7Q5Y3 Cluster: Chromosome... 1661 0.0
gnl|LJGI|TC79341 homologue to UniRef100_A7Q5Y3 Cluster: Chromoso... 880 0.0
gnl|LJGI|DC596187 similar to UniRef100_A7QBC3 Cluster: Chromosom... 74 3e-12
gnl|LJGI|TC71883 similar to UniRef100_A7Q7B9 Cluster: Chromosome... 60 5e-08
>gnl|LJGI|TC57578 similar to UniRef100_A7Q5Y3 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 1115
Score = 1661 bits (838), Expect = 0.0
Identities = 841/842 (99%)
Strand = Plus / Plus
Query: 1 atgtttgatggagtcccagaccagttccaccaattcataacaccaaggacttcacttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgtttgatggagtcccagaccagttccaccaattcataacaccaaggacttcacttcct 178
Query: 61 cttcacttacctttccctctccatgcttcttcagcccctaacaataacaccaccttccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cttcacttacctttccctctccatgcttcttcagcccctaacaataacaccaccttccct 238
Query: 121 tcttttgatccttacaacccttctcatcatcaattgccattccagcccaatctcttgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tcttttgatccttacaacccttctcatcatcaattgccattccagcccaatctcttgcac 298
Query: 181 cacccattacaccacaaagatgaagagaaggaagaaaacaacaacacagtgcagccaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cacccattacaccacaaagatgaagagaaggaagaaaacaacaacacagtgcagccaaat 358
Query: 241 ccaatgaactttcaaattgaaagagatcaaagacaacaactacctcagcttcagcagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ccaatgaactttcaaattgaaagagatcaaagacaacaactacctcagcttcagcagcag 418
Query: 301 caggttgatccctggacaaatgatgaagttcttgctcttttaaggatcagatctagtatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caggttgatccctggacaaatgatgaagttcttgctcttttaaggatcagatctagtatg 478
Query: 361 gagagttggttcccagagttcacttgggaacatgtctcaaggaagctagcagaagttgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gagagttggttcccagagttcacttgggaacatgtctcaaggaagctagcagaagttgga 538
Query: 421 tacaagaggagtgcagagaagtgcaaggagaagtttgaagaagagactagatatttcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tacaagaggagtgcagagaagtgcaaggagaagtttgaagaagagactagatatttcaac 598
Query: 481 aacattaattacaccaacaagagtactaatattaataattatcggtttctcactgagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aacattaattacaccaacaagagtactaatattaataattatcggtttctcactgagctt 658
Query: 541 gaagagctttatgaggaggtagggactgagaagagtactactcatcagcagcagcagcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaagagctttatgaggaggtagggactgagaagagtactactcatcagcagcagcagcaa 718
Query: 601 caacaagacaagatggaggagcgtgcagcattggatgatcaggatcatcatgatgattcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 caacaagacaagatggaggagcgtgcagcattggatgatcaggatcatcatgatgattcg 778
Query: 661 gttgatcaaacaaaacaaaacaaggctcaaagtgaggaggatcaagagaaaatcatgaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gttgatcaaacaaaacaaaacaaggctcaaagtgaggaggatcaagagaaaatcatgaag 838
Query: 721 gagaggaagaggaagagggttgatgataggtttgaggtgttcaaggggttttgtgagagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 gagaggaagaggaagagggttgatgataggtttgaggtgttcaaggggttttgtgagagt 898
Query: 781 gttgtgaacaacatgatggctcggcaggaagagatgcacaggaaaatcattgaggacatg 840
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gttgtgaacaacatgatgggtcggcaggaagagatgcacaggaaaatcattgaggacatg 958
Query: 841 gt 842
||
Sbjct: 959 gt 960
Score = 180 bits (91), Expect = 2e-44
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 907 aacaaggagcttgagatgatggcacatgagcaagctattgctggtgataggcaagccaac 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 aacaaggagcttgagatgatggcacatgagcaagctattgctggtgataggcaagccaac 1084
Query: 967 atcattcaattcttgaagaattttgagaaaa 997
|||||||||||||||||||||||||||||||
Sbjct: 1085 atcattcaattcttgaagaattttgagaaaa 1115
>gnl|LJGI|TC79341 homologue to UniRef100_A7Q5Y3 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 768
Score = 880 bits (444), Expect = 0.0
Identities = 543/565 (96%), Gaps = 12/565 (2%)
Strand = Plus / Plus
Query: 1236 tttgattcataaaggctccactatagagaaag--atgatgttgggagaa-ggtggccaaa 1292
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1 tttgattcataaaggctccactatagagaaaagaatgatgttgggagaaaggtggccaaa 60
Query: 1293 aga-tgaggttttggcactgataaacctaaggtgcactagcaacaacaatgaggacaagg 1351
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatgaggttttggcactgataaacctaaggtgcactagcaacaacaatgaggacaagg 120
Query: 1352 aagggaacaataaggcaccactatgggagagaatctcacaagggatgttagagttgggat 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggaacaataaggcaccactatgggagagaatctcacaagggatgttagagttgggat 180
Query: 1412 acaagaggagtgcaaagaggtgtaaagagaaatgggagaacataaacaagtacttcagga 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaagaggagtgcaaagaggtgtaaagagaaatgggagaacataaacaagtacttcagga 240
Query: 1472 aaaccaaggataacactagtaagaagaggtcccttgattcaaggacatgtccctacttcc 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaccaaggataacactagtaagaagaggtcccttgattcaaggacatgtccctacttcc 300
Query: 1532 atcaactcagcaatctgtataatcaagggaaacttgttccacaatctgaaaggccagaag 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcaactcagcaatctgtataatcaagggaaacttgttccacaatctgaaaggccagaag 360
Query: 1592 ggaaattgaataatgcggcagcaaataataatgcaccagatcaaatta-cccctcaagct 1650
|||||||||||||||||||||| |||||||||||||| ||||| |||| |||||| ||||
Sbjct: 361 ggaaattgaataatgcggcagccaataataatgcacccgatcacattaccccctccagct 420
Query: 1651 gagtcttcttcca--cccaagtggggtctggttgtggta-atttcactgtg-cagcagca 1706
||||||||||||| |||| ||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 421 gagtcttcttccatccccacgtggggtttggttgtggtatatttcactgtgccagcagca 480
Query: 1707 gcaaca-gc--agaaggttgatgatcatgaaggtgagaaaacttcgatgcagcaagtacc 1763
|| ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 gccacacgccacgaaggttgatgatcatgaaggtgagaaaacttcgatgcagccagtacc 540
Query: 1764 ttctttggattttgatcagttttaa 1788
|||||||||||||||||||||||||
Sbjct: 541 ttctttggattttgatcagttttaa 565
>gnl|LJGI|DC596187 similar to UniRef100_A7QBC3 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 546
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 1420 agtgcaaagaggtgtaaagagaaatgggagaacataaacaagtacttca 1468
||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 280 agtgccaagaggtgcaaggagaaatgggagaacataaacaagtacttca 328
>gnl|LJGI|TC71883 similar to UniRef100_A7Q7B9 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1291
Score = 60.0 bits (30), Expect = 5e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1411 tacaagaggagtgcaaagaggtgtaaagagaaatgggagaacataaacaagtacttca 1468
||||| |||| ||| |||||||| || ||||| ||||||||||| |||||||||||||
Sbjct: 185 tacaacaggaatgccaagaggtgcaaggagaagtgggagaacatcaacaagtacttca 242