Miyakogusa Predicted Gene

Lj0g3v0044989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0044989.1 tr|Q5WN07|Q5WN07_ORYSJ Os05g0150300 protein
OS=Oryza sativa subsp. japonica GN=P0001A07.2 PE=4
SV=1,48.53,0.00000004, ,CUFF.2182.1
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g38050.2                                                        62   1e-10
Glyma07g38050.1                                                        62   1e-10
Glyma15g10370.1                                                        62   2e-10
Glyma17g02640.1                                                        60   4e-10
Glyma13g28720.1                                                        60   7e-10

>Glyma07g38050.2 
          Length = 967

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 18/68 (26%)

Query: 1   MTRLLDLIEDYLMFQGYQYSCIDDNTDGEHRKASMAVF------------------VANN 42
           MTRLLD++EDYLMF+GYQY  ID NT G+ R AS+  F                  +  N
Sbjct: 509 MTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIEAFNKPGSEKFVFLLSTRAGGLGIN 568

Query: 43  LATADIVI 50
           LATAD+VI
Sbjct: 569 LATADVVI 576


>Glyma07g38050.1 
          Length = 1058

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 18/68 (26%)

Query: 1   MTRLLDLIEDYLMFQGYQYSCIDDNTDGEHRKASMAVF------------------VANN 42
           MTRLLD++EDYLMF+GYQY  ID NT G+ R AS+  F                  +  N
Sbjct: 509 MTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIEAFNKPGSEKFVFLLSTRAGGLGIN 568

Query: 43  LATADIVI 50
           LATAD+VI
Sbjct: 569 LATADVVI 576


>Glyma15g10370.1 
          Length = 1115

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 18/68 (26%)

Query: 1   MTRLLDLIEDYLMFQGYQYSCIDDNTDGEHRKASMAVF------------------VANN 42
           MTRLLD++EDYLMF+GYQY  ID NT G+ R AS+  F                  +  N
Sbjct: 523 MTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGIN 582

Query: 43  LATADIVI 50
           LATAD+VI
Sbjct: 583 LATADVVI 590


>Glyma17g02640.1 
          Length = 1059

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 18/68 (26%)

Query: 1   MTRLLDLIEDYLMFQGYQYSCIDDNTDGEHRKASMAVF------------------VANN 42
           MTRLLD++EDYLMF GYQY  ID NT G+ R AS+  F                  +  N
Sbjct: 510 MTRLLDILEDYLMFCGYQYCRIDGNTGGDDRDASIEAFNKPGSEKFVFLLSTRAGGLGIN 569

Query: 43  LATADIVI 50
           LATAD+VI
Sbjct: 570 LATADVVI 577


>Glyma13g28720.1 
          Length = 1067

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 18/68 (26%)

Query: 1   MTRLLDLIEDYLMFQGYQYSCIDDNTDGEHRKASMAVF------------------VANN 42
           MTRLLD++EDYL+F+GYQY  ID NT G+ R AS+  F                  +  N
Sbjct: 518 MTRLLDILEDYLVFRGYQYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGIN 577

Query: 43  LATADIVI 50
           LATAD+VI
Sbjct: 578 LATADVVI 585