Miyakogusa Predicted Gene

Lj0g3v0022169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0022169.1 Non Characterized Hit- tr|D8TL49|D8TL49_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,28.76,2e-17,seg,NULL,CUFF.1231.1
         (327 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g039490.2 | transmembrane protein, putative | HC | chr1:14...   369   e-102
Medtr1g039490.1 | transmembrane protein, putative | HC | chr1:14...   333   2e-91

>Medtr1g039490.2 | transmembrane protein, putative | HC |
           chr1:14616219-14623969 | 20130731
          Length = 318

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/214 (82%), Positives = 192/214 (89%)

Query: 74  LPWIQEKALDLVEFTGSVTQAIPGPRVGPTSFPWILAVPLAYAGLTFVIAFVKTVRKFTS 133
           LPWIQEKALDLVEFTGSVTQAIPGPRVGPTS PWILAVPL Y GLTFVIAFVKTV+KFTS
Sbjct: 77  LPWIQEKALDLVEFTGSVTQAIPGPRVGPTSLPWILAVPLGYLGLTFVIAFVKTVKKFTS 136

Query: 134 PKAKRRRLVSKNATLCRSIDDLFQKGRDQVTLDALNEIVNKTGFELEEILRKYIRYTLNE 193
           PKA+RR+LV KNA LC+S+D+L Q+GRD++ +D L  I NKTGF LEEILRKYIRY LNE
Sbjct: 137 PKAQRRKLVGKNAMLCKSVDELLQRGRDEIKVDDLKAIENKTGFGLEEILRKYIRYALNE 196

Query: 194 KPFNPDTVADLIQLRRASMLNDSDVARILNEISLRIVGDKGPVVMDKSGYTEKGFKRKLA 253
           KPFNPD VADLIQLRRAS L+DS  A ILNEIS RIV DKGP+VM+KSGYTEKGFKRKLA
Sbjct: 197 KPFNPDVVADLIQLRRASSLSDSQAAEILNEISRRIVRDKGPIVMNKSGYTEKGFKRKLA 256

Query: 254 VQTLFGKVFYLSELPEFCSRDSSLVVKETFGVTD 287
           VQ LFGKVFYLSELPEFCS+DSSLVVKE FGVT+
Sbjct: 257 VQALFGKVFYLSELPEFCSKDSSLVVKEIFGVTE 290


>Medtr1g039490.1 | transmembrane protein, putative | HC |
           chr1:14616219-14620424 | 20130731
          Length = 328

 Score =  333 bits (853), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 161/206 (78%), Positives = 177/206 (85%), Gaps = 4/206 (1%)

Query: 74  LPWIQEKALDLVEFTGSVTQAIPGPRVGPTSFPWILAVPLAYAGLTFVIAFVKTVRKFTS 133
           LPWIQEKALDLVEFTGSVTQAIPGPRVGPTS PWILAVPL Y GLTFVIAFVKTV+KFTS
Sbjct: 77  LPWIQEKALDLVEFTGSVTQAIPGPRVGPTSLPWILAVPLGYLGLTFVIAFVKTVKKFTS 136

Query: 134 PKAKRRRLVSKNATLCRSIDDLFQKGRDQVTLDALNEIVNKTGFELEEILRKYIRYTLNE 193
           PKA+RR+LV KNA LC+S+D+L Q+GRD++ +D L  I NKTGF LEEILRKYIRY LNE
Sbjct: 137 PKAQRRKLVGKNAMLCKSVDELLQRGRDEIKVDDLKAIENKTGFGLEEILRKYIRYALNE 196

Query: 194 KPFNPDTVADLIQLRRASMLNDSDVARILNEISLRIVGDKGPVVMDKSGYTEKGFKRKLA 253
           KPFNPD VADLIQLRRAS L+DS  A ILNEIS RIV DKGP+VM+KSGYTEKGFKRKLA
Sbjct: 197 KPFNPDVVADLIQLRRASSLSDSQAAEILNEISRRIVRDKGPIVMNKSGYTEKGFKRKLA 256

Query: 254 VQTLFGKVFYLSELPEFCSRDSSLVV 279
           VQ LFGKVFYLSE    CS    +++
Sbjct: 257 VQALFGKVFYLSE----CSEPPDMII 278