Miyakogusa Predicted Gene

Lj0g3v0016659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016659.1 Non Characterized Hit- tr|I3S3E5|I3S3E5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.39,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; 8-AMINO-7-OXONON,CUFF.1034.1
         (214 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g008020.1 | 8-amino-7-oxononanoate synthase-like protein |...   359   e-99 
Medtr6g033290.1 | long chain base biosynthesis 2a-like protein |...    55   6e-08
Medtr3g054030.1 | long chain base biosynthesis protein 1a | HC |...    49   3e-06
Medtr5g072020.1 | long chain base biosynthesis protein 1a | HC |...    49   3e-06

>Medtr3g008020.1 | 8-amino-7-oxononanoate synthase-like protein | HC
           | chr3:1291558-1284618 | 20130731
          Length = 473

 Score =  359 bits (922), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 174/214 (81%), Positives = 183/214 (85%)

Query: 1   MRRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE 60
           M+RK+V+TDSLFSMDGD+APMVELA+LRKKH FL VIDDAHGTFVCGKNGGGVAEEFNCE
Sbjct: 246 MKRKIVITDSLFSMDGDFAPMVELAELRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCE 305

Query: 61  KDVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
           KDVDICIGTLSK AGCHGGFIACS SWKLLIQSRGRSFIFS                  K
Sbjct: 306 KDVDICIGTLSKAAGCHGGFIACSTSWKLLIQSRGRSFIFSTATPVPVAAAAHAAVRVAK 365

Query: 121 HETWRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQARRFLLQSGFHVTAIGPPV 180
           HETWRRKAIWN VKDFHLLTGIPVTS IISL+VG+EDKALQA R LLQ+GFHVTAI PP 
Sbjct: 366 HETWRRKAIWNRVKDFHLLTGIPVTSPIISLIVGTEDKALQASRHLLQAGFHVTAIRPPT 425

Query: 181 VPPNSCRLRVALSTVHTRQDLENLTAALSRCINF 214
           VPPNSCRLRVALS VHTR+DLENL AALS CINF
Sbjct: 426 VPPNSCRLRVALSAVHTREDLENLAAALSNCINF 459


>Medtr6g033290.1 | long chain base biosynthesis 2a-like protein | HC
           | chr6:10618345-10608414 | 20130731
          Length = 490

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCEK 61
           ++ +V+ + ++SM+G+   + E+  + KK+     +D+AH     GK G GV E    + 
Sbjct: 240 KKIMVIVEGIYSMEGELCKLPEVIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299

Query: 62  -DVDICIGTLSKVAGCHGGFIACSE 85
            D+DI +GT +K  G  GG+IA S+
Sbjct: 300 ADIDIMMGTFTKSFGSCGGYIAGSK 324


>Medtr3g054030.1 | long chain base biosynthesis protein 1a | HC |
           chr3:21428489-21422336 | 20130731
          Length = 480

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 3   RKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE-K 61
           R+ +V ++L+   G  AP+ ++ KL++K+ F  ++D+++   V G +G G+ E +    +
Sbjct: 247 RRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHYGVPVE 306

Query: 62  DVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRS--FIFS 101
            +D+    +       GGF  C+ S +++   R  S  ++FS
Sbjct: 307 KLDLITAAMGHALATEGGF--CTGSARVIDHQRLSSSGYVFS 346


>Medtr5g072020.1 | long chain base biosynthesis protein 1a | HC |
           chr5:30640537-30633377 | 20130731
          Length = 480

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 3   RKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE-K 61
           R+ +V ++L+   G  AP+ ++ KL++K+ F  ++D+++   V G +G G+ E +    +
Sbjct: 247 RRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHYGVPVE 306

Query: 62  DVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRS--FIFS 101
            +D+    +       GGF  C+ S +++   R  S  ++FS
Sbjct: 307 KLDLITAAMGHALATEGGF--CTGSARVIDHQRLSSSGYVFS 346