Miyakogusa Predicted Gene

Lj0g3v0016659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016659.1 Non Chatacterized Hit- tr|I3S3E5|I3S3E5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.39,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; 8-AMINO-7-OXONON,CUFF.1034.1
         (214 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04620.1 | Symbols: ATBIOF, BIOF | biotin F | chr5:1328004-13...   306   7e-84
AT5G04620.2 | Symbols: ATBIOF, BIOF | biotin F | chr5:1327292-13...   306   8e-84
AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferas...    60   8e-10
AT5G23670.2 | Symbols: LCB2 | long chain base2 | chr5:7981889-79...    58   6e-09
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981889-79...    58   6e-09
AT3G48790.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    53   2e-07
AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain...    50   9e-07
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain...    50   9e-07

>AT5G04620.1 | Symbols: ATBIOF, BIOF | biotin F |
           chr5:1328004-1329934 FORWARD LENGTH=343
          Length = 343

 Score =  306 bits (784), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 143/214 (66%), Positives = 169/214 (78%)

Query: 1   MRRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE 60
           M+RKVVVTDSLFSMDGD+APM EL++LRKK+ FL VIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 115 MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE 174

Query: 61  KDVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVD+C+GTLSK AGCHGGFIACS+ WK LIQSRGRSFIFS                  +
Sbjct: 175 ADVDLCVGTLSKAAGCHGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR 234

Query: 121 HETWRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQARRFLLQSGFHVTAIGPPV 180
            E WRRKAIW  VK+F  L+G+ ++S IISLVVG+++KAL+A R+LL+SGFHV AI PP 
Sbjct: 235 KEIWRRKAIWERVKEFKELSGVDISSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPT 294

Query: 181 VPPNSCRLRVALSTVHTRQDLENLTAALSRCINF 214
           VPPNSCRLRV LS  HT +D++ L  ALS C++F
Sbjct: 295 VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 328


>AT5G04620.2 | Symbols: ATBIOF, BIOF | biotin F |
           chr5:1327292-1329934 FORWARD LENGTH=476
          Length = 476

 Score =  306 bits (783), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 143/214 (66%), Positives = 169/214 (78%)

Query: 1   MRRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE 60
           M+RKVVVTDSLFSMDGD+APM EL++LRKK+ FL VIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 248 MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE 307

Query: 61  KDVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVD+C+GTLSK AGCHGGFIACS+ WK LIQSRGRSFIFS                  +
Sbjct: 308 ADVDLCVGTLSKAAGCHGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR 367

Query: 121 HETWRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQARRFLLQSGFHVTAIGPPV 180
            E WRRKAIW  VK+F  L+G+ ++S IISLVVG+++KAL+A R+LL+SGFHV AI PP 
Sbjct: 368 KEIWRRKAIWERVKEFKELSGVDISSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPT 427

Query: 181 VPPNSCRLRVALSTVHTRQDLENLTAALSRCINF 214
           VPPNSCRLRV LS  HT +D++ L  ALS C++F
Sbjct: 428 VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461


>AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferase 1
           | chr3:18089346-18092276 FORWARD LENGTH=489
          Length = 489

 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 14/223 (6%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE- 60
           ++ +VV + ++SM+G+   + E+  + KK+     +D+AH     GK G GV E    + 
Sbjct: 240 KKIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDT 299

Query: 61  KDVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVDI +GT +K  G  GG+IA S+     ++ +  + +++                   
Sbjct: 300 SDVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKHQCPAHLYATSISTPSATQIISAIKVIL 359

Query: 121 HETWRRKAIW---------NHVKDFHLLTGIPV----TSHIISLVVGSEDKALQARRFLL 167
            E    +            N  +      G  V     S ++ +++ +  K     R  L
Sbjct: 360 GEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL 419

Query: 168 QSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALSR 210
           +    V  +G P  P    R R+ +S  H+R+DL      +S+
Sbjct: 420 RENLAVVVVGFPATPLLLARARICISASHSREDLIKALQVISK 462


>AT5G23670.2 | Symbols: LCB2 | long chain base2 |
           chr5:7981889-7985037 FORWARD LENGTH=489
          Length = 489

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 14/223 (6%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE- 60
           ++ +VV + ++SM+G+   + E+  + KK+     +D+AH     GK G G+ E    + 
Sbjct: 240 KKIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDT 299

Query: 61  KDVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVD+ +GT +K  G  GG+IA S+     ++ +  + +++                   
Sbjct: 300 ADVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVIL 359

Query: 121 HETWRRKAIW---------NHVKDFHLLTGIPV----TSHIISLVVGSEDKALQARRFLL 167
            E    +            N  +      G  V     S ++ +++ +  K     R  L
Sbjct: 360 GEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL 419

Query: 168 QSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALSR 210
           +    V  +G P  P    R R+ +S  H+R+DL      +S+
Sbjct: 420 RQKVAVVVVGFPATPLLLARARICISASHSREDLIRALKVISK 462


>AT5G23670.1 | Symbols: LCB2 | long chain base2 |
           chr5:7981889-7985037 FORWARD LENGTH=489
          Length = 489

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 14/223 (6%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE- 60
           ++ +VV + ++SM+G+   + E+  + KK+     +D+AH     GK G G+ E    + 
Sbjct: 240 KKIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDT 299

Query: 61  KDVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVD+ +GT +K  G  GG+IA S+     ++ +  + +++                   
Sbjct: 300 ADVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVIL 359

Query: 121 HETWRRKAIW---------NHVKDFHLLTGIPV----TSHIISLVVGSEDKALQARRFLL 167
            E    +            N  +      G  V     S ++ +++ +  K     R  L
Sbjct: 360 GEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL 419

Query: 168 QSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALSR 210
           +    V  +G P  P    R R+ +S  H+R+DL      +S+
Sbjct: 420 RQKVAVVVVGFPATPLLLARARICISASHSREDLIRALKVISK 462


>AT3G48790.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr3:18093404-18095181 FORWARD LENGTH=350
          Length = 350

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE- 60
           ++ +VV + ++SM+G+   + E+  +  ++     +D+AH     GK G GV E    + 
Sbjct: 97  KKIIVVVEGIYSMEGEICDLPEIVSVCSEYKAYVYLDEAHSIGAIGKTGRGVCELLGVDT 156

Query: 61  KDVDICIGTLSKVAGCHGGFIACSE 85
            +VDI +GT +K  G  GG+IA S+
Sbjct: 157 TEVDIMMGTFTKSLGSCGGYIAGSK 181


>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
           base1 | chr4:17218598-17221124 FORWARD LENGTH=482
          Length = 482

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 3   RKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE-K 61
           R+ +V ++++   G  AP+ E+ KL++K+ F  ++D+++   V G++G G+AE  +   +
Sbjct: 246 RRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHHSVPIE 305

Query: 62  DVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRS--FIFS 101
            +D+    +       GGF  C+ + +++   R  S  ++FS
Sbjct: 306 KIDVVTAAMGHALATEGGF--CTGNARIIDYQRLSSSGYVFS 345


>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
           base1 | chr4:17218598-17221124 FORWARD LENGTH=482
          Length = 482

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 3   RKVVVTDSLFSMDGDYAPMVELAKLRKKHDFLFVIDDAHGTFVCGKNGGGVAEEFNCE-K 61
           R+ +V ++++   G  AP+ E+ KL++K+ F  ++D+++   V G++G G+AE  +   +
Sbjct: 246 RRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHHSVPIE 305

Query: 62  DVDICIGTLSKVAGCHGGFIACSESWKLLIQSRGRS--FIFS 101
            +D+    +       GGF  C+ + +++   R  S  ++FS
Sbjct: 306 KIDVVTAAMGHALATEGGF--CTGNARIIDYQRLSSSGYVFS 345