Miyakogusa Predicted Gene

Lj0g3v0015659.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0015659.1 Non Chatacterized Hit- tr|I1HUU1|I1HUU1_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,54.12,4e-19,
,NODE_44741_length_509_cov_240.966599.path1.1
         (399 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71413 similar to UniRef100_A7NWZ1 Cluster: Chromosome...   791   0.0  

>gnl|LJGI|TC71413 similar to UniRef100_A7NWZ1 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 1028

 Score =  791 bits (399), Expect = 0.0
 Identities = 399/399 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgctttgttcatcactctcgttactccctcccatcacttcccagcccaaactcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atggcgctttgttcatcactctcgttactccctcccatcacttcccagcccaaactcact 205

                                                                       
Query: 61  tccaccaaatccttctcatctccaataccacccaacttgcatggcctcttgaccaagact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tccaccaaatccttctcatctccaataccacccaacttgcatggcctcttgaccaagact 265

                                                                       
Query: 121 aacaggttctctttgaaagctggttttaatgagattgagcctgacctcaacgaagatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aacaggttctctttgaaagctggttttaatgagattgagcctgacctcaacgaagatcct 325

                                                                       
Query: 181 agggatcagtttgcccttaacagcattgactctgaagatttcgagtatggaattttcgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agggatcagtttgcccttaacagcattgactctgaagatttcgagtatggaattttcgat 385

                                                                       
Query: 241 ggacatcacacttactatgaaggagaacatgagaaaggaacattttggggttctattgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggacatcacacttactatgaaggagaacatgagaaaggaacattttggggttctattgca 445

                                                                       
Query: 301 gaagatatagcagcaacagagccccccacaggattccaggggattatttcatggctcttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaagatatagcagcaacagagccccccacaggattccaggggattatttcatggctcttc 505

                                                  
Query: 361 ccaccagctatcgctgctggggtgttcttcgatgttccg 399
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccaccagctatcgctgctggggtgttcttcgatgttccg 544