Miyakogusa Predicted Gene
- Lj0g3v0006099.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0006099.1 Non Chatacterized Hit- tr|A5B9J7|A5B9J7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.09,2e-16,seg,NULL; ZF_C3H1,Zinc finger, CCCH-type; no
description,NULL; zf-CCCH,Zinc finger, CCCH-type; zinc
,NODE_51858_length_774_cov_72.377258.path1.1
(144 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g27300.1 159 7e-40
Glyma16g32370.1 155 9e-39
Glyma15g19290.1 68 3e-12
Glyma15g19240.1 67 6e-12
Glyma02g39050.1 66 1e-11
Glyma02g39050.2 66 1e-11
Glyma15g19190.1 66 2e-11
Glyma15g19150.1 65 3e-11
Glyma15g19270.1 65 3e-11
Glyma15g19210.1 64 4e-11
Glyma15g19260.1 64 4e-11
Glyma15g19230.1 64 5e-11
Glyma14g37100.1 64 5e-11
Glyma15g19280.1 64 8e-11
Glyma15g19220.1 63 1e-10
Glyma15g19130.1 63 1e-10
Glyma15g19140.1 62 2e-10
Glyma15g19160.1 57 5e-09
>Glyma09g27300.1
Length = 426
Score = 159 bits (403), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 101/145 (69%), Gaps = 14/145 (9%)
Query: 1 MDVDGGSKRVYHRLGGPGGDARNQKVCFYWQAGKCDRHPCPYLHSEVVPPHSNSNGTSSK 60
MDVDGG+KRVY+RLGG DA++QKVC++WQAGKC+R+PCP+LHSE ++NGTSSK
Sbjct: 1 MDVDGGNKRVYNRLGG---DAKHQKVCYHWQAGKCNRYPCPFLHSESPANSHHANGTSSK 57
Query: 61 RPHGYADNSSFSGPRRSQNFS-TWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYW 119
R + DNS FSGPRRS NF+ TW KA+KVCNYW
Sbjct: 58 RTY---DNSGFSGPRRSPNFNNTWGRGGGRGGGGGGGAGRGVVV-------KAEKVCNYW 107
Query: 120 AQGSCSYGERCKFLHSWSLGDGFSL 144
QGSCSYGERCKFLHSWS+GDGFSL
Sbjct: 108 IQGSCSYGERCKFLHSWSVGDGFSL 132
>Glyma16g32370.1
Length = 427
Score = 155 bits (393), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 13/145 (8%)
Query: 1 MDVDGGSKRVYHRLGGPGGDARNQKVCFYWQAGKCDRHPCPYLHSEVVPPHSNSNGTSSK 60
MDVDGG+KRVY+RLGG DA++QKVCF+WQAGKC+R+PCP+LHSE+ ++NG SSK
Sbjct: 1 MDVDGGNKRVYNRLGG---DAKHQKVCFHWQAGKCNRYPCPFLHSELPANSHHANGASSK 57
Query: 61 RPHGYADNSSFSGPRRSQNFS-TWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYW 119
R + DNS FSGPRRS +F+ TW KA+KVCNYW
Sbjct: 58 RAY---DNSGFSGPRRSPSFNNTWGRGGSRGGGGAGAGAGRGVVV------KAEKVCNYW 108
Query: 120 AQGSCSYGERCKFLHSWSLGDGFSL 144
QG+CSYGERCKFLH+WS+GDGFSL
Sbjct: 109 IQGNCSYGERCKFLHTWSVGDGFSL 133
>Glyma15g19290.1
Length = 337
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 18/125 (14%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AG+C+R+PC +LH E P + N+ + K+PH +++N+ G +++
Sbjct: 14 RTTCSYWRAGRCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSFSENTLKYGSKKA- 72
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+ ++C YW +C +GE+C +LHSW
Sbjct: 73 ------------LLRDNGDRGDATRVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 120
Query: 139 GDGFS 143
GDGFS
Sbjct: 121 GDGFS 125
>Glyma15g19240.1
Length = 299
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AGKC+R+PC +LH E P + N+ + K+PH ++N+ G +++
Sbjct: 14 RTTCSYWKAGKCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENTPKYGSKKA- 72
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+ ++C YW +C +GE+C +LHSW
Sbjct: 73 ------------LLRDNGDRGDATRVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 120
Query: 139 GDGFS 143
GDGFS
Sbjct: 121 GDGFS 125
>Glyma02g39050.1
Length = 421
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AG+C+R+PC +LH E P + N+ + K+PH ++N+ G +++
Sbjct: 14 RTTCSYWRAGRCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENTPKYGSKKA- 72
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+ ++C YW +C +GE+C +LHSW
Sbjct: 73 ------------LLRDNGDRGDATRVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFC 120
Query: 139 GDGFS 143
GDGFS
Sbjct: 121 GDGFS 125
>Glyma02g39050.2
Length = 364
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AG+C+R+PC +LH E P + N+ + K+PH ++N+ G +++
Sbjct: 14 RTTCSYWRAGRCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENTPKYGSKKA- 72
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+ ++C YW +C +GE+C +LHSW
Sbjct: 73 ------------LLRDNGDRGDATRVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFC 120
Query: 139 GDGFS 143
GDGFS
Sbjct: 121 GDGFS 125
>Glyma15g19190.1
Length = 410
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AGKC+R+PC +LH E P + N+ + K+PH ++N+ P+ +
Sbjct: 14 RTTCSYWRAGKCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDR 69
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+T + ++C YW +C +GE+C +LHSW
Sbjct: 70 GDAT--------------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 109
Query: 139 GDGFS 143
GDGFS
Sbjct: 110 GDGFS 114
>Glyma15g19150.1
Length = 410
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 29/125 (23%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AGKC+R+PC ++H E P + N+ + K+PH ++N+ P+ +
Sbjct: 14 RTTCSYWRAGKCNRNPCRFVHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDR 69
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+T + ++C YW +C++GE+C +LHSW
Sbjct: 70 GDAT--------------------RVAKAFKKSSPRICKYWINNNCAHGEQCLYLHSWFH 109
Query: 139 GDGFS 143
GDGFS
Sbjct: 110 GDGFS 114
>Glyma15g19270.1
Length = 410
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 27 CFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQNFS 81
C YW+AG+C+R+PC +LH E P + N+ + K+PH ++N+ P+ + +
Sbjct: 17 CSYWRAGRCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDRGDT 72
Query: 82 TWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSLGDG 141
T + ++C YW +C +GE+C +LHSW GDG
Sbjct: 73 T--------------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFRGDG 112
Query: 142 FS 143
FS
Sbjct: 113 FS 114
>Glyma15g19210.1
Length = 403
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AGKC+R+PC ++H E P + N+ + K+PH ++N+ P+ +
Sbjct: 14 RTTCSYWRAGKCNRNPCRFVHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDR 69
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+T + ++C YW +C +GE+C +LHSW
Sbjct: 70 GDAT--------------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 109
Query: 139 GDGFS 143
GDGFS
Sbjct: 110 GDGFS 114
>Glyma15g19260.1
Length = 410
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AGKC+R+PC ++H E P + N+ + K+PH ++N+ P+ +
Sbjct: 14 RTTCSYWRAGKCNRNPCRFVHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDR 69
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+T + ++C YW +C +GE+C +LHSW
Sbjct: 70 GDAT--------------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 109
Query: 139 GDGFS 143
GDGFS
Sbjct: 110 GDGFS 114
>Glyma15g19230.1
Length = 363
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 27 CFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQNFS 81
C YW+AG+C+R+PC +LH E P + N+ + K+PH ++N+ P+ + +
Sbjct: 17 CSYWRAGRCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDRGDA 72
Query: 82 TWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSLGDG 141
T + ++C YW +C +GE+C +LHSW GDG
Sbjct: 73 T--------------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFRGDG 112
Query: 142 FS 143
FS
Sbjct: 113 FS 114
>Glyma14g37100.1
Length = 421
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 9 RVYHRLGGPGGDARNQKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPH 63
R R+GG C YW+AG+C+R+PC +LH E P + N+ K+PH
Sbjct: 7 RRTERIGGTA--------CAYWRAGRCNRNPCRFLHIETPSPPTACGYVNTAYRYGKKPH 58
Query: 64 GYADNSSFSGPRRSQNFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGS 123
++N+ P+ S + + ++C YW +
Sbjct: 59 SSSENT----PKYSSKTAL---------ISDNGDRGDATRVAKASKKSSPRICKYWINNN 105
Query: 124 CSYGERCKFLHSWSLGDGFS 143
C +GE+C +LHSW GDGFS
Sbjct: 106 CVHGEQCLYLHSWFHGDGFS 125
>Glyma15g19280.1
Length = 410
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AG+C+++PC +LH E P + N+ + K+PH ++N+ P+ +
Sbjct: 14 RTTCSYWRAGRCNKNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDR 69
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+T + ++C YW +C +GE+C +LHSW
Sbjct: 70 GDAT--------------------RMAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 109
Query: 139 GDGFS 143
GDGFS
Sbjct: 110 GDGFS 114
>Glyma15g19220.1
Length = 124
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW+AGKC+R+PC ++H E P + N+ + K+PH ++N+ P+ +
Sbjct: 14 RTTCSYWRAGKCNRNPCRFVHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDR 69
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+T + ++C YW +C +GE+C +LHSW
Sbjct: 70 GDAT--------------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 109
Query: 139 GDGFS 143
GDGFS
Sbjct: 110 GDGFS 114
>Glyma15g19130.1
Length = 299
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 18/125 (14%)
Query: 24 QKVCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQ 78
+ C YW AGKC+R+PC ++H E P + N+ + K+PH + N+ G +++
Sbjct: 14 RTTCSYWIAGKCNRNPCRFVHIETPSPPAACGYGNTAYSYGKKPHSSSLNTPKYGSKKA- 72
Query: 79 NFSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSL 138
+ ++C YW +C +GE+C +LHSW
Sbjct: 73 ------------LLRDNGDRGDATRVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFR 120
Query: 139 GDGFS 143
GDGFS
Sbjct: 121 GDGFS 125
>Glyma15g19140.1
Length = 421
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 26 VCFYWQAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQNF 80
C YW+AG+C+R+ C +LH E P + N+ + K+PH ++N+ G +++
Sbjct: 16 TCSYWRAGRCNRNRCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENTPKYGSKKA--- 72
Query: 81 STWXXXXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSLGD 140
+ ++C YW +C +GE+C +LHSW GD
Sbjct: 73 ----------LLGDNGDRGDATRVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFRGD 122
Query: 141 GFS 143
GFS
Sbjct: 123 GFS 125
>Glyma15g19160.1
Length = 390
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 29/118 (24%)
Query: 31 QAGKCDRHPCPYLHSEVVPP-----HSNSNGTSSKRPHGYADNSSFSGPRRSQNFSTWXX 85
+AGKC+R+PC +LH E P + N+ + K+PH ++N+ P+ + +T
Sbjct: 1 RAGKCNRNPCRFLHIETPSPPAACGYGNTAYSYGKKPHSSSENT----PKYDRGDAT--- 53
Query: 86 XXXXXXXXXXXXXXXXXXXXXXXXXKADKVCNYWAQGSCSYGERCKFLHSWSLGDGFS 143
+ ++C YW +C +GE+C +LHSW GDGFS
Sbjct: 54 -----------------RVAKAFKKSSPRICKYWINNNCVHGEQCLYLHSWFRGDGFS 94