Miyakogusa Predicted Gene

Lj0g3v0006099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0006099.1 Non Chatacterized Hit- tr|A5B9J7|A5B9J7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.09,2e-16,seg,NULL; ZF_C3H1,Zinc finger, CCCH-type; no
description,NULL; zf-CCCH,Zinc finger, CCCH-type; zinc
,NODE_51858_length_774_cov_72.377258.path1.1
         (432 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57603 similar to UniRef100_A7QVM3 Cluster: Chromosome...   856   0.0  

>gnl|LJGI|TC57603 similar to UniRef100_A7QVM3 Cluster: Chromosome chr16 scaffold_189,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_189, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (40%)
          Length = 831

 Score =  856 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgttgacggtggtagtaagcgcgtgtaccacaggctcggtgggcccggtggagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atggacgttgacggtggtagtaagcgcgtgtaccacaggctcggtgggcccggtggagac 385

                                                                       
Query: 61  gcgaggaaccagaaagtgtgtttttattggcaagcgggcaagtgtgatcgtcacccgtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcgaggaaccagaaagtgtgtttttattggcaagcgggcaagtgtgatcgtcacccgtgc 445

                                                                       
Query: 121 ccgtatctgcatagcgaggtggtgcctcctcattccaattccaatggtacttcctccaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccgtatctgcatagcgaggtggtgcctcctcattccaattccaatggtacttcctccaag 505

                                                                       
Query: 181 aggcctcatgggtatgctgataattcgagcttctcggggccgcggcggagccagaatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aggcctcatgggtatgctgataattcgagcttctcggggccgcggcggagccagaatttt 565

                                                                       
Query: 241 agtacctggggtcctggtggtggccgcggcggcggacgtggtggtgctggacgtggaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agtacctggggtcctggtggtggccgcggcggcggacgtggtggtgctggacgtggaggg 625

                                                                       
Query: 301 ggagttggtggtgggaggggagtggttgtcaaggctgataaagtttgtaattattgggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ggagttggtggtgggaggggagtggttgtcaaggctgataaagtttgtaattattgggct 685

                                                                       
Query: 361 caagggagctgtagttatggagagaggtgtaagttccttcactcttggagtttaggtgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 caagggagctgtagttatggagagaggtgtaagttccttcactcttggagtttaggtgat 745

                       
Query: 421 gggttttctttg 432
           ||||||||||||
Sbjct: 746 gggttttctttg 757