Miyakogusa Predicted Gene

Lj0g3v0001949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0001949.1 Non Characterized Hit- tr|I3SNB5|I3SNB5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,
,CUFF.112.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g083310.1 | hypothetical protein | HC | chr3:37608900-3760...   321   5e-88

>Medtr3g083310.1 | hypothetical protein | HC |
           chr3:37608900-37605513 | 20130731
          Length = 251

 Score =  321 bits (822), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 153/183 (83%), Positives = 163/183 (89%), Gaps = 2/183 (1%)

Query: 68  EAPVLWAGRLCIFYALLKAGLAGSPANPLVSDLEVGDGGIAESA--DLGFSKWTQAILGK 125
           E PVLW GR+CI+YAL+K G  GSP+NP++S LE+GD G +  +  DLGFSKWTQ ILGK
Sbjct: 69  ETPVLWVGRICIYYALVKTGFVGSPSNPILSGLEIGDAGDSSESGGDLGFSKWTQVILGK 128

Query: 126 PAKEVANGGKFVSKWHPTTKGTLRRNYRVRSKSEGRRLLKAIASLLSDDDHFVDATSHKG 185
           PAKE AN G   SKWHPTTKGTLRRNYRV SKSEGRRLLKAIASLLSDDDHFVDATSHKG
Sbjct: 129 PAKEGANVGNLKSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFVDATSHKG 188

Query: 186 CQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTDKDYTKAEKLERVLRSS 245
           CQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPL+DKDYTKAEKLERVLRSS
Sbjct: 189 CQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLSDKDYTKAEKLERVLRSS 248

Query: 246 PSV 248
           PSV
Sbjct: 249 PSV 251