Miyakogusa Predicted Gene

Lj0g3v0001949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0001949.1 Non Chatacterized Hit- tr|I3SNB5|I3SNB5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,
,CUFF.112.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G32930.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   288   3e-78

>AT3G32930.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast
           envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
           DURING: 13 growth stages; Has 57 Blast hits to 57
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:13489595-13490704 FORWARD LENGTH=249
          Length = 249

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 138/184 (75%), Positives = 155/184 (84%), Gaps = 3/184 (1%)

Query: 68  EAPVLWAGRLCIFYALLKAGLAGSPANPLVSDLEVG--DGGIAESADLGFSKWTQAILG- 124
           E P+LWAGR+C+FYAL+KAG AGS +NP+VS L+ G  D    + ADLGFSKW Q I G 
Sbjct: 66  ETPILWAGRICVFYALVKAGFAGSKSNPIVSGLDTGGVDVEYDDGADLGFSKWLQNIKGN 125

Query: 125 KPAKEVANGGKFVSKWHPTTKGTLRRNYRVRSKSEGRRLLKAIASLLSDDDHFVDATSHK 184
           KP K+ A+  K VSKWHPTTKGTLRRNYR+ SK+EG RLLKAIASLLSDDDHF DATSHK
Sbjct: 126 KPDKDAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKAIASLLSDDDHFRDATSHK 185

Query: 185 GCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTDKDYTKAEKLERVLRS 244
           GCQIRRESAHG+SVCCNNVRALFDELPTPHL VEITPFPAGPLT+ DY KAEKLER+LRS
Sbjct: 186 GCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAGPLTENDYLKAEKLERILRS 245

Query: 245 SPSV 248
             ++
Sbjct: 246 GANI 249