Miyakogusa Predicted Gene

Lj6g3v2259900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2259900.1 Non Chatacterized Hit- tr|A9PJV9|A9PJV9_9ROSI
Putative uncharacterized protein OS=Populus
trichocarp,45.08,0.00000000000002,coiled-coil,NULL;
seg,NULL,CUFF.61000.1
         (115 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7IK02_MEDTR (tr|G7IK02) Protein SUPPRESSOR OF GENE SILENCING-li...    60   2e-07
A2Q480_MEDTR (tr|A2Q480) Emr1, related OS=Medicago truncatula GN...    60   2e-07

>G7IK02_MEDTR (tr|G7IK02) Protein SUPPRESSOR OF GENE SILENCING-like protein
           OS=Medicago truncatula GN=MTR_2g007690 PE=4 SV=1
          Length = 629

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 13/124 (10%)

Query: 1   MDAQEKFFLDXXXXXXXARKAKEEEFEKLQEAQLEEGNWVYGDSSEKEEDKKIME----- 55
           M+ QEKFFLD       +  AKE+EF K Q+A+ +E   V GDSS KE+D  IME     
Sbjct: 506 MNEQEKFFLDQIQIIHQSIAAKEDEFTKSQQAK-QEVMCVNGDSSVKEDDNHIMEKNSSF 564

Query: 56  -------MREFEEGRFNVIKIHDDKKKAXXXXXXXXXXXXXXXXXXXXVQLMDKFSSGQT 108
                  MR+FE  R N++K H +K+ A                     QLM+K +   +
Sbjct: 565 TKSQDKDMRQFEAVRDNILKTHGEKQLALKKKQWQEQVELEKELENELTQLMNKHALSHS 624

Query: 109 QEES 112
           QEES
Sbjct: 625 QEES 628


>A2Q480_MEDTR (tr|A2Q480) Emr1, related OS=Medicago truncatula
           GN=MtrDRAFT_AC157375g28v1 PE=4 SV=1
          Length = 630

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 13/124 (10%)

Query: 1   MDAQEKFFLDXXXXXXXARKAKEEEFEKLQEAQLEEGNWVYGDSSEKEEDKKIME----- 55
           M+ QEKFFLD       +  AKE+EF K Q+A+ +E   V GDSS KE+D  IME     
Sbjct: 507 MNEQEKFFLDQIQIIHQSIAAKEDEFTKSQQAK-QEVMCVNGDSSVKEDDNHIMEKNSSF 565

Query: 56  -------MREFEEGRFNVIKIHDDKKKAXXXXXXXXXXXXXXXXXXXXVQLMDKFSSGQT 108
                  MR+FE  R N++K H +K+ A                     QLM+K +   +
Sbjct: 566 TKSQDKDMRQFEAVRDNILKTHGEKQLALKKKQWQEQVELEKELENELTQLMNKHALSHS 625

Query: 109 QEES 112
           QEES
Sbjct: 626 QEES 629