Miyakogusa Predicted Gene

Lj6g3v1742800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1742800.1 Non Chatacterized Hit- tr|F6I2A9|F6I2A9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,65.08,0.00000000000001,SUBFAMILY NOT NAMED,NULL; STRESS ASSOCIATED
ENDOPLASMIC RETICULUM PROTEIN (SERP1/RAMP4),Endoplasmic ,CUFF.59852.1
         (63 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F6I2A9_VITVI (tr|F6I2A9) Putative uncharacterized protein OS=Vit...    55   8e-06

>F6I2A9_VITVI (tr|F6I2A9) Putative uncharacterized protein OS=Vitis vinifera
          GN=VIT_00s0508g00030 PE=4 SV=1
          Length = 68

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 1  MTTSRRVADRKVARFERNSLKKG------TKKGFPYPVGPIXXXXXXXXXXXXXXXQIIR 54
          MTTS+R+ADRKVA+F++N  K+G      TKKG+ YPVGPI               QIIR
Sbjct: 1  MTTSKRLADRKVAKFQKNITKRGSVPETSTKKGYDYPVGPILLGFFVFVVVGSSLFQIIR 60

Query: 55 NAAGRATA 62
           A     A
Sbjct: 61 TATSGGMA 68