Miyakogusa Predicted Gene

Lj6g3v1693090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1693090.1 Non Chatacterized Hit- tr|B9R8H5|B9R8H5_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus
communis,24.05,0.0000000001,A Receptor for Ubiquitination
Targets,F-box domain, cyclin-like; no description,NULL; F-box,F-box
do,gene.g66554.t1.1
         (366 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9R8H5_RICCO (tr|B9R8H5) Ubiquitin-protein ligase, putative OS=R...    73   2e-10
G7KT59_MEDTR (tr|G7KT59) F-box protein OS=Medicago truncatula GN...    72   4e-10
G7KT61_MEDTR (tr|G7KT61) Putative uncharacterized protein OS=Med...    70   1e-09

>B9R8H5_RICCO (tr|B9R8H5) Ubiquitin-protein ligase, putative OS=Ricinus communis
           GN=RCOM_1599830 PE=4 SV=1
          Length = 398

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 170/420 (40%), Gaps = 93/420 (22%)

Query: 4   ELLELVLRSLD-RRDYLKCRLVCRGWRSIVNGAIKNKGPPTPRFPARLLLPPTLLCNTGD 62
           EL+E++ + L    DYL  R VC  WR  +     +  P  P     L+LP +   +   
Sbjct: 11  ELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLP----WLMLPQSQSQSNQS 66

Query: 63  PATLFDDITRDNRLLRVPT------HVGKGHFASLRSEEEGWLMFQSICNNLLWIFNPVS 116
               F   T     L +P       H G  H         GWLM       +L I NP++
Sbjct: 67  RRAFFSLSTNKFHFLNLPEVSYRKRHCGSSH---------GWLMILDDTPTILLI-NPLT 116

Query: 117 SESYKLPQLPP-GHTIPYNL---------------RVAFS----SQSYLVVISLYSADDK 156
                LP L    + I +N                RV  S      S++  + L S+  K
Sbjct: 117 RAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLK 176

Query: 157 DGSI---------PQLCFCRVDNDKSWSRIETIESRFEVKDIMLLGWKLYAMNEDFVTIF 207
           D +            L +CR + DKSWS +E   S  E  D++ +    YA+N+    + 
Sbjct: 177 DNNFVVIAILNQTDDLAYCR-NGDKSWSLVENARSFCE--DVIFVNGMFYAVNKAGQIV- 232

Query: 208 NLEDLNAITAERLVMQLPKLDSDGERVNMHRLARDPTCGEVLLVLFRCKYMSHDYEIED- 266
            + D+++ +     M+ P+  + G+   M  L      G+ LL++ R  Y+  +YE +  
Sbjct: 233 -ICDISSDSPRVSFMETPR-QAGGD---MQYLV---NSGDELLLVTR--YLDLEYEFDHP 282

Query: 267 ------------FLIFKLDMSGPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIGV 314
                       F +F+LD +GP+W+ + +L  + LF+       +S  + +       +
Sbjct: 283 DMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSG-----CM 337

Query: 315 DNCVFFSLH--------HLINPCLGVFYLKEKTIQPLNS---NLSLEKQLWRSLWFTPSP 363
            NC++++          H  +  LG+F L ++TI+PL     N +   Q    LW +P+P
Sbjct: 338 GNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397


>G7KT59_MEDTR (tr|G7KT59) F-box protein OS=Medicago truncatula GN=MTR_7g069800
           PE=4 SV=1
          Length = 431

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 171/405 (42%), Gaps = 75/405 (18%)

Query: 1   MQAELLELVLRSLDRRDYLKCRLVCRGWRSIVNGAIKNKG-PPTPRFPARLLLPPTLLCN 59
           + A++LEL+++ L  +DYL+ R +CR  R IV+  I+NK   P P  P+   L    L  
Sbjct: 49  LPADVLELIMKRLPLKDYLRLRAICRSCRKIVSNIIENKHCCPLPELPS---LSTKSLHR 105

Query: 60  TGDPATLFDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNN---LLWIFNPVS 116
              P            LLR  T +G           +GWL+           ++  NPVS
Sbjct: 106 VRTP------------LLRDNTCIG---------SVDGWLIVSDYSEKGFAKVFFLNPVS 144

Query: 117 SESYKLPQLPPGHTIPYNLRVAFSSQSYLVVISLYSADDKDGSIPQLC-----FCRVD-- 169
                +P      +  Y   +     SY+  ++  S  + DGS   L      +C +   
Sbjct: 145 DVRITIP------SKLYLSSIIGQRISYVSKMTASSKPNCDGSDCYLAGLLSDYCHIAIY 198

Query: 170 --NDKSWSRIE-TIESRFEVKDIMLLGWKLYAMN--EDFVTIFNLED-LNAITAERLVMQ 223
              +KSW+ +E   +S     DI ++G KLY +    D + +++L+D  NA     ++ +
Sbjct: 199 KLFEKSWTIVEPDKDSGTYFTDIEIIGTKLYVIGSLSDSILVYDLKDSTNAPRKPEVLAE 258

Query: 224 LPKLDSDGERVNMHRLARDPTCGEVLLV-LFRCKYMSHDYEIED---------------- 266
           LP+  + G  +    LA+D T  E+ L+ +F    +  +  I D                
Sbjct: 259 LPRALA-GSSIYSSFLAKDKTLRELYLIYVFYNGEIDTEQHISDRFNVVSSFVKPPKLTS 317

Query: 267 FLIFKLDMS-GPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIGVDNCVFFSLHH- 324
           F +FKLD +  P   +   L  +V FV      V+S   LN   + +   N ++F++   
Sbjct: 318 FEVFKLDTNKSPIGWQNVKLEDKVAFVSNCKSMVMSRDELNYSEELVR-GNSIYFAITFP 376

Query: 325 --LINPC----LGVFYLKEKTIQPLNSNLSLEKQL-WRSLWFTPS 362
              INP      G+F L +++I+      S   ++ +  LWF PS
Sbjct: 377 CPKINPPTSLEFGIFCLNDRSIKYFPEETSKHGEVPYYPLWFVPS 421


>G7KT61_MEDTR (tr|G7KT61) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_7g069820 PE=4 SV=1
          Length = 385

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 70/402 (17%)

Query: 1   MQAELLELVLRSLDRRDYLKCRLVCRGWRSIVNGAIKNKG-PPTPRFPARLLLPPTLLCN 59
           +  ++LEL+++ L  +DYL+ R +CR  R IV+  I+NK   P P  P+   L    L  
Sbjct: 12  LPVDVLELIMKRLPLKDYLRLRAICRSCRKIVSNIIENKHCCPLPELPS---LSTKSLHR 68

Query: 60  TGDPATLFDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNN---LLWIFNPVS 116
              P            LLR  T +G           +GWL+           ++  NPV+
Sbjct: 69  VRTP------------LLRDNTCIG---------SVDGWLIVSDNSEKGFAKIFFLNPVT 107

Query: 117 SESYKLP---QLPP--GHTIPYNLRVAFSSQSYLVVISLYSADDKDGSIPQLCFCRVDN- 170
                +P    LP   G +I Y  ++  SS+        Y A    G     C   +   
Sbjct: 108 DVRITIPSKLHLPSIVGQSISYVTKLTASSKPNCDGSDCYLA----GLFSDYCHIAIYKL 163

Query: 171 -DKSWSRIET-IESRFEVKDIMLLGWKLYAMN--EDFVTIFNLED-LNAITAERLVMQLP 225
            +KSW+ +E+  +S     DI ++G KLY +    D + +++L+D  NA     ++ +LP
Sbjct: 164 FEKSWTIVESDKDSGTYFTDIEIIGTKLYVIGSLSDSILVYDLKDSTNAPRKAEVLAELP 223

Query: 226 KLDSDGERVNMHRLARDPTCGEVLLV-LFRCKYMSHDYEIED----------------FL 268
           +  + G  ++   LA+D    E+ L+ +F    +  +  I D                F 
Sbjct: 224 RAPA-GSSIHSSFLAKDKMLRELYLISVFYNGEIDTEQHISDRFNVVSSFVKPPKLTSFE 282

Query: 269 IFKLDMS-GPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIGVDNCVFFSLHH--- 324
           +FKLD +  P   +   L  +V FV      V++   LN   + +   N ++F++     
Sbjct: 283 VFKLDTNKSPIGWQNVKLEDKVAFVSNWKSMVLARDELNYSEELVR-GNSIYFAITFPCP 341

Query: 325 LINPC----LGVFYLKEKTIQPLNSNLSLEKQLWRSLWFTPS 362
            INP      G+F L + +I+      S    +   LWF PS
Sbjct: 342 KINPPTSLEFGMFCLNDSSIKYFPEETSKHGDVPCPLWFVPS 383