Miyakogusa Predicted Gene
- Lj6g3v1629770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1629770.1 tr|G7IKX1|G7IKX1_MEDTR Endoribonuclease Dicer
OS=Medicago truncatula GN=MTR_2g030490 PE=4
SV=1,72.22,0.000000000001,no description,NULL; HELICASE-RELATED,NULL;
P-loop containing nucleoside triphosphate
hydrolases,NUL,NODE_57511_length_371_cov_17.010782.path2.1
(52 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7IKX1_MEDTR (tr|G7IKX1) Endoribonuclease Dicer OS=Medicago trun... 79 4e-13
K7LBG6_SOYBN (tr|K7LBG6) Uncharacterized protein OS=Glycine max ... 74 1e-11
I1L0F9_SOYBN (tr|I1L0F9) Uncharacterized protein OS=Glycine max ... 74 1e-11
I1L0G0_SOYBN (tr|I1L0G0) Uncharacterized protein OS=Glycine max ... 73 3e-11
M5W8C9_PRUPE (tr|M5W8C9) Uncharacterized protein OS=Prunus persi... 70 2e-10
K7MB46_SOYBN (tr|K7MB46) Uncharacterized protein OS=Glycine max ... 69 7e-10
B9HHX6_POPTR (tr|B9HHX6) Dicer-like protein OS=Populus trichocar... 69 7e-10
H9N4C7_NICAT (tr|H9N4C7) Dicer-like 2 protein OS=Nicotiana atten... 68 1e-09
A5BU06_VITVI (tr|A5BU06) Putative uncharacterized protein OS=Vit... 68 1e-09
F6GX12_VITVI (tr|F6GX12) Putative uncharacterized protein OS=Vit... 67 1e-09
B9HYI3_POPTR (tr|B9HYI3) Dicer-like protein OS=Populus trichocar... 66 5e-09
K4D5B2_SOLLC (tr|K4D5B2) Uncharacterized protein OS=Solanum lyco... 64 2e-08
M4ET69_BRARP (tr|M4ET69) Uncharacterized protein OS=Brassica rap... 64 2e-08
D7L0F5_ARALL (tr|D7L0F5) Putative uncharacterized protein OS=Ara... 63 3e-08
R0I8S9_9BRAS (tr|R0I8S9) Uncharacterized protein (Fragment) OS=C... 63 4e-08
B9UDZ4_BRACM (tr|B9UDZ4) Dicer-like protein 2 OS=Brassica campes... 62 9e-08
>G7IKX1_MEDTR (tr|G7IKX1) Endoribonuclease Dicer OS=Medicago truncatula
GN=MTR_2g030490 PE=4 SV=1
Length = 1418
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 49/55 (89%), Gaps = 5/55 (9%)
Query: 2 VEEALPMELDN----QVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+EEAL ME+D+ Q+ P+ALPFARSYQ+EAL+KAIRENTIV+L+TGSGKTLIA
Sbjct: 40 MEEAL-MEMDDYDEQQIRPNALPFARSYQLEALEKAIRENTIVYLETGSGKTLIA 93
>K7LBG6_SOYBN (tr|K7LBG6) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 1421
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Query: 2 VEEALPMELD------NQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+EEA ME+D + PD LPFARSYQ+EAL KAI ENTIV+L+TGSGKTLIA
Sbjct: 35 MEEAPSMEMDTDSQEDQNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSGKTLIA 91
>I1L0F9_SOYBN (tr|I1L0F9) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 1387
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Query: 2 VEEALPMELD------NQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+EEA ME+D + PD LPFARSYQ+EAL KAI ENTIV+L+TGSGKTLIA
Sbjct: 1 MEEAPSMEMDTDSQEDQNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSGKTLIA 57
>I1L0G0_SOYBN (tr|I1L0G0) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 1414
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 7/58 (12%)
Query: 2 VEEALPMELDNQ-------VVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+EE LP+E+D+ + D L FARSYQ+EALD AIRENTIV+L+TGSGKTLIA
Sbjct: 1 MEEVLPVEMDSNTQQQQKVISADVLSFARSYQLEALDNAIRENTIVYLETGSGKTLIA 58
>M5W8C9_PRUPE (tr|M5W8C9) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000240mg PE=4 SV=1
Length = 1415
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 4 EALPMELDN-QVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
E + ME+D Q+ D LPFARSYQ+EAL+ AI++NTIVFL+TGSGKTLIA
Sbjct: 7 EPVDMEMDGIQLSADPLPFARSYQLEALEAAIKQNTIVFLETGSGKTLIA 56
>K7MB46_SOYBN (tr|K7MB46) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 285
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 5/56 (8%)
Query: 2 VEEALPMELDN-----QVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+EE L +E+D+ ++ D LPFA SYQ+EALD AIRENTIV+L+TGSGKTLIA
Sbjct: 1 MEEVLSLEVDSNTQQQKITADVLPFAGSYQLEALDNAIRENTIVYLETGSGKTLIA 56
>B9HHX6_POPTR (tr|B9HHX6) Dicer-like protein OS=Populus trichocarpa GN=DCL903
PE=4 SV=1
Length = 1468
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Query: 4 EALPMELD--NQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
E + M++D Q+ D LPFARSYQ+EAL+KA++ NTIVFL+TGSGKTLIA
Sbjct: 2 EPVSMDIDTTQQLPADPLPFARSYQLEALEKALKHNTIVFLETGSGKTLIA 52
>H9N4C7_NICAT (tr|H9N4C7) Dicer-like 2 protein OS=Nicotiana attenuata GN=DCL2
PE=2 SV=1
Length = 1403
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/42 (69%), Positives = 38/42 (90%)
Query: 11 DNQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+ Q+ PD+LPFARSYQ+EAL+ A++ NTIV+L+TGSGKTLIA
Sbjct: 11 NQQLCPDSLPFARSYQLEALETALKRNTIVYLETGSGKTLIA 52
>A5BU06_VITVI (tr|A5BU06) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_043738 PE=4 SV=1
Length = 1296
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/36 (86%), Positives = 35/36 (97%)
Query: 17 DALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
D LPFARSYQIEAL+KAI++NTIVFL+TGSGKTLIA
Sbjct: 19 DPLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIA 54
>F6GX12_VITVI (tr|F6GX12) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_04s0023g00920 PE=4 SV=1
Length = 1395
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/36 (86%), Positives = 35/36 (97%)
Query: 17 DALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
D LPFARSYQIEAL+KAI++NTIVFL+TGSGKTLIA
Sbjct: 19 DPLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIA 54
>B9HYI3_POPTR (tr|B9HYI3) Dicer-like protein OS=Populus trichocarpa GN=DCL901
PE=4 SV=1
Length = 1408
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Query: 4 EALPMELD--NQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
E + +++D Q+ D LPFARSYQ+EAL++A+++NTIVFL+TGSGKTLIA
Sbjct: 2 EPVSVDIDTTQQLPADPLPFARSYQLEALEQALKQNTIVFLETGSGKTLIA 52
>K4D5B2_SOLLC (tr|K4D5B2) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc11g008520.1 PE=4 SV=1
Length = 1428
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/42 (71%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Query: 12 NQVVP-DALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
NQ+V D LPFARSYQ+EAL+ A+++NTIV+L+TGSGKTLIA
Sbjct: 13 NQLVSADPLPFARSYQLEALEAALKQNTIVYLETGSGKTLIA 54
>M4ET69_BRARP (tr|M4ET69) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra031999 PE=4 SV=1
Length = 1277
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 38/44 (86%), Gaps = 2/44 (4%)
Query: 9 ELDNQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
E +QV P LPFARSYQ+EAL+KA++ NTIV+L+TGSGKTLIA
Sbjct: 9 ESADQVSP--LPFARSYQVEALEKAMKRNTIVYLETGSGKTLIA 50
>D7L0F5_ARALL (tr|D7L0F5) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_317213 PE=4 SV=1
Length = 2033
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 12 NQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
+QV L FARSYQ+EAL+KAI++NTIVF +TGSGKTLIA
Sbjct: 731 DQVSASPLHFARSYQVEALEKAIKQNTIVFFETGSGKTLIA 771
>R0I8S9_9BRAS (tr|R0I8S9) Uncharacterized protein (Fragment) OS=Capsella
rubella GN=CARUB_v10016233mg PE=4 SV=1
Length = 1392
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 9 ELDNQVVPDALPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
E +QV L FARSYQ+EAL+KAI +NTIVFL+TGSGKTL+A
Sbjct: 11 ETVDQVSASPLQFARSYQVEALEKAINQNTIVFLETGSGKTLVA 54
>B9UDZ4_BRACM (tr|B9UDZ4) Dicer-like protein 2 OS=Brassica campestris PE=2 SV=1
Length = 1392
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/34 (79%), Positives = 33/34 (97%)
Query: 19 LPFARSYQIEALDKAIRENTIVFLDTGSGKTLIA 52
LPFARSYQ+EAL+KA++ NTIV+L+TGSGKTLIA
Sbjct: 20 LPFARSYQVEALEKAMKRNTIVYLETGSGKTLIA 53