Miyakogusa Predicted Gene

Lj6g3v0937060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0937060.1 CUFF.59339.1
         (419 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T190_LOTJA (tr|I3T190) Uncharacterized protein OS=Lotus japoni...   288   2e-75

>I3T190_LOTJA (tr|I3T190) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 141

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 139/141 (98%), Positives = 140/141 (99%)

Query: 279 MEIQVPTSILCQRLNHLNRLMRLKDMLVKEDELSAVLTNSRLTSLQEIINNFSQVDDEGP 338
           MEIQVPTSILCQRLNHLNRLMRLKDMLVKEDELSAVLTNSRLTSLQEIINNFSQVDDEGP
Sbjct: 1   MEIQVPTSILCQRLNHLNRLMRLKDMLVKEDELSAVLTNSRLTSLQEIINNFSQVDDEGP 60

Query: 339 LNKWNELNQRLAWLHSMEAQDSDLLAMRSNSELASLEGYRMRKQPRPPSRNFGIVGNCWI 398
           LNKWNELNQRLAWLHSMEAQDS LLAMRSNSELASLEGYRMRKQPRPPS+NFGIVGNCWI
Sbjct: 61  LNKWNELNQRLAWLHSMEAQDSHLLAMRSNSELASLEGYRMRKQPRPPSQNFGIVGNCWI 120

Query: 399 KPPLQLMQTACAPLPEHHKPL 419
           KPPLQLMQTACAPLPEHHKPL
Sbjct: 121 KPPLQLMQTACAPLPEHHKPL 141



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)

Query: 107 IISWNLNRLDRLVKLKDILVMEDEMSAELANSRLTRLQEVIMSCSDDDEEERLQNKSIEL 166
           I+   LN L+RL++LKD+LV EDE+SA L NSRLT LQE+I + S  D+E  L NK  EL
Sbjct: 9   ILCQRLNHLNRLMRLKDMLVKEDELSAVLTNSRLTSLQEIINNFSQVDDEGPL-NKWNEL 67

Query: 167 YEHERWSKYIELKRLRRMELSYNS 190
            +   W   +E +    + +  NS
Sbjct: 68  NQRLAWLHSMEAQDSHLLAMRSNS 91