Miyakogusa Predicted Gene

Lj6g3v0927840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0927840.1 tr|G7ISI4|G7ISI4_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_2g020100 PE=4 SV=1,32.65,0.000000008,DUF295,Protein
of unknown function DUF295,CUFF.58630.1
         (136 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7ISI4_MEDTR (tr|G7ISI4) F-box protein OS=Medicago truncatula GN...    65   1e-08
B9T2T6_RICCO (tr|B9T2T6) Putative uncharacterized protein OS=Ric...    59   8e-07
M8B1F9_TRIUA (tr|M8B1F9) Uncharacterized protein OS=Triticum ura...    55   8e-06

>G7ISI4_MEDTR (tr|G7ISI4) F-box protein OS=Medicago truncatula GN=MTR_2g020100
           PE=4 SV=1
          Length = 566

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)

Query: 4   DKIFGIAVHRLDFSQSIWKRVKSIKDMVFFLSDNDLPFACPVNHGGGGGGLIYFTSMNKK 63
           D++  + V++   +Q +W++V+S+KD VFF+S  D  FAC   +    GG +Y    +  
Sbjct: 231 DRVTAVFVYKFYCTQRVWEKVESVKDTVFFISSVDSAFACQATNPETEGGRVYIALKDCN 290

Query: 64  IVHIFNLEDNSLRICKAFPENWFPPKSF--WVMPNLRM 99
             +I+N+ED SL   + F  N    +S+  W MP+ R+
Sbjct: 291 FFYIYNIEDRSLVTSQHF-SNLSARRSYSRWFMPDTRI 327


>B9T2T6_RICCO (tr|B9T2T6) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0082090 PE=4 SV=1
          Length = 690

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 6/98 (6%)

Query: 3   YD-KIFGIAVHRLDFSQSIWKRVKSIKDMVFFLSDNDLPFACPVNHGGGGGGLIYFTSMN 61
           YD ++  I V ++DFS+  W++V+ +KD V FL D+    +CP       G  +YF   +
Sbjct: 230 YDSRVVDIEVRKIDFSRMAWEKVECVKDSVLFLDDH-YSISCPEIRPEIQGNRLYFVLKD 288

Query: 62  KKIVHIFNLEDNSLRICKAF-PENWFPPKSFWVMPNLR 98
            K+ + +++ED S+ +   + PE+  P  SFWVMP+LR
Sbjct: 289 HKL-YSYSIEDRSISLVSPYLPED--PFLSFWVMPDLR 323


>M8B1F9_TRIUA (tr|M8B1F9) Uncharacterized protein OS=Triticum urartu
           GN=TRIUR3_30161 PE=4 SV=1
          Length = 314

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 4   DKIFGIAVHRLDFSQSIWKRVKSIKDMVFFLSDNDLPFACPVNHGGGGGGLIYFTSMNKK 63
           + I+G  VHR+DFS+  W++V  + D  F LS  +    C V   G     IY     ++
Sbjct: 219 ETIYGARVHRMDFSKQRWRKVYDLGDRAFLLSLFNSGALCSVGESGLRENCIYMAYPWEQ 278

Query: 64  IVHIFNLEDNSLRICKAFPENWFPPKSFWVMP 95
            +HIF+++D S+   K   +     K+FWV+P
Sbjct: 279 TLHIFSVKDGSMETHK-LDDAPSSDKAFWVLP 309