Miyakogusa Predicted Gene

Lj5g3v2241420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2241420.1 Non Chatacterized Hit- tr|B9RP36|B9RP36_RICCO
Clathrin assembly protein, putative OS=Ricinus
communi,38.98,1.4,seg,NULL,CUFF.57031.1
         (170 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SPQ4_LOTJA (tr|I3SPQ4) Uncharacterized protein OS=Lotus japoni...   164   7e-39
I3S3Q3_LOTJA (tr|I3S3Q3) Uncharacterized protein OS=Lotus japoni...   164   8e-39

>I3SPQ4_LOTJA (tr|I3SPQ4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 121

 Score =  164 bits (416), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 80/89 (89%), Positives = 80/89 (89%)

Query: 82  MEVRERTPLLREVRVRARHGTDASDEEDPRTIQTNSPSSCCWWRLRSPHPQTCKCLMNEL 141
           MEVRERTPLLREVRVRARHGTDASDEEDPRTIQTNSPSSCCWWRLRSPHPQTCKCLMNEL
Sbjct: 1   MEVRERTPLLREVRVRARHGTDASDEEDPRTIQTNSPSSCCWWRLRSPHPQTCKCLMNEL 60

Query: 142 KEPLLASDGXXXXXXXXXESKFPWNVCRE 170
           KEPLLASDG         ESKFPWNVCRE
Sbjct: 61  KEPLLASDGCFFMFFFCMESKFPWNVCRE 89


>I3S3Q3_LOTJA (tr|I3S3Q3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 120

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 80/89 (89%), Positives = 80/89 (89%)

Query: 82  MEVRERTPLLREVRVRARHGTDASDEEDPRTIQTNSPSSCCWWRLRSPHPQTCKCLMNEL 141
           MEVRERTPLLREVRVRARHGTDASDEEDPRTIQTNSPSSCCWWRLRSPHPQTCKCLMNEL
Sbjct: 1   MEVRERTPLLREVRVRARHGTDASDEEDPRTIQTNSPSSCCWWRLRSPHPQTCKCLMNEL 60

Query: 142 KEPLLASDGXXXXXXXXXESKFPWNVCRE 170
           KEPLLASDG         ESKFPWNVCRE
Sbjct: 61  KEPLLASDGCFFMFFFCMESKFPWNVCRE 89