Miyakogusa Predicted Gene

Lj5g3v1889470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889470.1 tr|G7L070|G7L070_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g055830 PE=4 SV=1,38.1,0.0000003, ,CUFF.56112.1
         (102 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7L070_MEDTR (tr|G7L070) F-box protein OS=Medicago truncatula GN...    59   5e-07
G7L074_MEDTR (tr|G7L074) F-box/kelch-repeat protein OS=Medicago ...    59   5e-07
G7L080_MEDTR (tr|G7L080) F-box protein OS=Medicago truncatula GN...    59   7e-07

>G7L070_MEDTR (tr|G7L070) F-box protein OS=Medicago truncatula GN=MTR_7g055830
           PE=4 SV=1
          Length = 375

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 8   VNVYNMGDRRWRRIQ---VSPF------PSLHLERGVAVYVSNTLNWLA---TIPADIMQ 55
           V V+N+GD  WR IQ   V+PF      P  HL     VYVS T+NWLA     P +   
Sbjct: 140 VRVFNLGDNVWRHIQSFPVAPFMDISTSPHTHLGINAGVYVSGTVNWLAIRNACPCNFEL 199

Query: 56  ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
           +++ ID + I+S DL  E   Q  LP       E    EP L  L
Sbjct: 200 KSITIDQFVIISLDLRTETYNQFLLPLG---FDEVTSVEPTLSFL 241


>G7L074_MEDTR (tr|G7L074) F-box/kelch-repeat protein OS=Medicago truncatula
           GN=MTR_7g055870 PE=4 SV=1
          Length = 426

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 8   VNVYNMGDRRWRRIQ---VSPF------PSLHLERGVAVYVSNTLNWLA---TIPADIMQ 55
           V V+N+GD  WR IQ   V+PF      P  HL     VYVS T+NWLA     P +   
Sbjct: 208 VRVFNLGDNVWRHIQSFPVAPFMDISTCPHTHLGINAGVYVSGTVNWLAIRNACPCNFEL 267

Query: 56  ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
           +++ ID + I+S DL  E   Q  LP       E    EP L  L
Sbjct: 268 KSITIDQFVIISLDLRTETYNQFLLPLG---FDEVTSVEPTLSFL 309


>G7L080_MEDTR (tr|G7L080) F-box protein OS=Medicago truncatula GN=MTR_7g055930
           PE=3 SV=1
          Length = 536

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 15/105 (14%)

Query: 8   VNVYNMGDRRWRRIQ---VSPF------PSLHLERGVAVYVSNTLNWLA---TIPADIMQ 55
           V V+N GD  WR IQ   V+PF      P  HL     VYVS T+NWLA     P +   
Sbjct: 208 VRVFNFGDNVWRHIQSFPVAPFMDISTCPHTHLGINAGVYVSGTVNWLAIRNACPCNFEL 267

Query: 56  ENLGIDMYTIVSFDLGKEELIQLPLPYSPRRIYEFQYFEPILGVL 100
           +++ ID + I+S DL  E   Q  LP       E    EP L  L
Sbjct: 268 KSITIDQFVIISLDLRTETYNQFLLPLG---FDEVTSVEPTLSFL 309