Miyakogusa Predicted Gene
- Lj5g3v1864570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1864570.1 Non Chatacterized Hit- tr|B9RNB4|B9RNB4_RICCO
Transcription factor, putative OS=Ricinus communis
GN=,60,1e-16,seg,NULL; HLH,Helix-loop-helix domain,CUFF.56076.1
(119 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1NHA0_SOYBN (tr|I1NHA0) Uncharacterized protein OS=Glycine max ... 139 3e-31
I1LD82_SOYBN (tr|I1LD82) Uncharacterized protein OS=Glycine max ... 139 4e-31
C6T4D4_SOYBN (tr|C6T4D4) Putative uncharacterized protein OS=Gly... 136 3e-30
B9GSV5_POPTR (tr|B9GSV5) Predicted protein OS=Populus trichocarp... 105 8e-21
F6HZB3_VITVI (tr|F6HZB3) Putative uncharacterized protein OS=Vit... 101 7e-20
B9I9G8_POPTR (tr|B9I9G8) Predicted protein OS=Populus trichocarp... 98 8e-19
B9RNB4_RICCO (tr|B9RNB4) Transcription factor, putative OS=Ricin... 90 3e-16
E9JWE3_BRAOC (tr|E9JWE3) BHLH1 transcription factor OS=Brassica ... 80 3e-13
M4CJT1_BRARP (tr|M4CJT1) Uncharacterized protein OS=Brassica rap... 80 4e-13
R0HHH6_9BRAS (tr|R0HHH6) Uncharacterized protein OS=Capsella rub... 78 1e-12
D7LGL5_ARALL (tr|D7LGL5) Transcription factor/ transcription reg... 76 3e-12
M4DXZ9_BRARP (tr|M4DXZ9) Uncharacterized protein OS=Brassica rap... 72 8e-11
M1AB71_SOLTU (tr|M1AB71) Uncharacterized protein OS=Solanum tube... 66 4e-09
K4C3Y1_SOLLC (tr|K4C3Y1) Uncharacterized protein OS=Solanum lyco... 63 3e-08
K4AXH2_SOLLC (tr|K4AXH2) Uncharacterized protein OS=Solanum lyco... 62 7e-08
M1AI94_SOLTU (tr|M1AI94) Uncharacterized protein OS=Solanum tube... 62 1e-07
M5X9Z9_PRUPE (tr|M5X9Z9) Uncharacterized protein OS=Prunus persi... 61 1e-07
B9SRC9_RICCO (tr|B9SRC9) Putative uncharacterized protein OS=Ric... 56 5e-06
>I1NHA0_SOYBN (tr|I1NHA0) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 127
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 90/127 (70%), Gaps = 8/127 (6%)
Query: 1 MGISSHPSFVPLSLKDLLQGTEESR-NPSYGYXXXXXXXXXXXX------XXRRPRGILM 53
MGISS PS V SLKDL+QGTEE++ + SYG RRPR ILM
Sbjct: 1 MGISSQPSLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKVKGTKRSVRRPRRILM 60
Query: 54 KRRRGGNRRGTV-AIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVD 112
RR G+RRG+ I++RVRTLK LVPNSDS+GLDGLFR+TADYIL+LQTRVRVMQVMV
Sbjct: 61 MNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQVMVK 120
Query: 113 VLTGYDD 119
VLTG D+
Sbjct: 121 VLTGSDE 127
>I1LD82_SOYBN (tr|I1LD82) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 128
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 90/127 (70%), Gaps = 8/127 (6%)
Query: 1 MGISSHPSFVPLSLKDLLQGTEESR-NPSYGYXXXXXXXXXXXX------XXRRPRGILM 53
MGISS PS V LSLKDL+QGTEE+R + SYG RRPR ILM
Sbjct: 1 MGISSQPSLVSLSLKDLIQGTEENRTSSSYGCLRSKALAAQAKKVKGTKRSVRRPRRILM 60
Query: 54 KRRRGGNRRGTV-AIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVD 112
+RR G+RRG+ I++RVR LK LVPNSDS+ LDGLFR+TADYIL+LQTRVRVMQVMV
Sbjct: 61 MKRRSGSRRGSNNGIRRRVRKLKSLVPNSDSLELDGLFRDTADYILSLQTRVRVMQVMVK 120
Query: 113 VLTGYDD 119
VLTG DD
Sbjct: 121 VLTGSDD 127
>C6T4D4_SOYBN (tr|C6T4D4) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 128
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 89/127 (70%), Gaps = 8/127 (6%)
Query: 1 MGISSHPSFVPLSLKDLLQGTEESR-NPSYGYXXXXXXXXXXXX------XXRRPRGILM 53
MGISS PS V LSLKDL+QGTEE+R + SYG RRPR ILM
Sbjct: 1 MGISSQPSLVSLSLKDLIQGTEENRTSSSYGCLRSKALAAQAKKVKGTKRSVRRPRRILM 60
Query: 54 KRRRGGNRRGTV-AIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVD 112
+RR G+RRG+ I++RVR LK LVPNSDS+ LDGL R+TADYIL+LQTRVRVMQVMV
Sbjct: 61 MKRRSGSRRGSNNGIRRRVRKLKSLVPNSDSLELDGLSRDTADYILSLQTRVRVMQVMVK 120
Query: 113 VLTGYDD 119
VLTG DD
Sbjct: 121 VLTGSDD 127
>B9GSV5_POPTR (tr|B9GSV5) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_552553 PE=4 SV=1
Length = 138
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 82/138 (59%), Gaps = 21/138 (15%)
Query: 1 MGISS--HPSFVPLSLKDLLQGTEESRN--PSYGYXXXXXXXXXX------------XXX 44
MG+S+ HP V SLK ++QG EE+ + P+
Sbjct: 1 MGVSAGEHPLLV--SLKGMVQGNEETMDHMPNEALWNKVSEAQTKRRCPLRRQKNGRHAR 58
Query: 45 XRRPRGILMKRR---RGGNRRGTVAIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQ 101
+RP ILMKRR G R I++RVRTLK+L+PNS+SMGLDGLFRETADYIL+LQ
Sbjct: 59 SKRPGRILMKRRARAEGSTVRSGYGIERRVRTLKKLIPNSESMGLDGLFRETADYILSLQ 118
Query: 102 TRVRVMQVMVDVLTGYDD 119
RV+VMQ+MV VLTG DD
Sbjct: 119 MRVKVMQIMVKVLTGSDD 136
>F6HZB3_VITVI (tr|F6HZB3) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_07s0005g01700 PE=4 SV=1
Length = 121
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 1 MGISSHPSFVPLSLKDLLQGTEESRNPSYGYXXXXXXXXXXXXXXRRPRGILMKRRRG-- 58
MG P + L LK ++ T++S PS RR + ILMKRR
Sbjct: 1 MGAPPQPLLMSLDLKGMVLETKDSCKPSGSLWRKVLEPKVKRRLQRRRQRILMKRRAHLP 60
Query: 59 GNRRGTVAIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYD 118
+RR T IQ+RVRTLK+LVPN DSMGLDGLFRETADYIL+LQ RV VMQ+MV VL+ D
Sbjct: 61 DSRRPTSGIQRRVRTLKKLVPNGDSMGLDGLFRETADYILSLQMRVEVMQIMVKVLSDSD 120
>B9I9G8_POPTR (tr|B9I9G8) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_774681 PE=4 SV=1
Length = 135
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 76/135 (56%), Gaps = 16/135 (11%)
Query: 1 MGISSHPSFVPLSLKDLLQGTEESRNPSYGYXXXXXXXXXXX-------------XXXRR 47
MG+S+ + +S K +QG EE + S +R
Sbjct: 1 MGVSAGEHSLLVSFKGKVQGNEEMVHKSNETLWENVMEGQAKRRCPPRKHKHGRHAEGKR 60
Query: 48 PRGILMKRR---RGGNRRGTVAIQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQTRV 104
PR ILMKR G RR + +RVRTLK+L+PN +S+GLDGLFRETADYIL+LQTRV
Sbjct: 61 PRRILMKRMARVEGSTRRAGYGVGRRVRTLKKLIPNGESLGLDGLFRETADYILSLQTRV 120
Query: 105 RVMQVMVDVLTGYDD 119
+VMQ+MV LTG D+
Sbjct: 121 KVMQIMVKELTGSDE 135
>B9RNB4_RICCO (tr|B9RNB4) Transcription factor, putative OS=Ricinus communis
GN=RCOM_1346460 PE=4 SV=1
Length = 111
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 46 RRPRGILMKRRRG--GNRRGTVA-IQKRVRTLKRLVPNSDSMGLDGLFRETADYILALQT 102
RR R +LMK R G G R T I KRV+TLK+L+PNS+SMGL+GLFRETADYIL+LQ
Sbjct: 34 RRCRRVLMKSRAGVRGYRSNTATGIHKRVKTLKKLIPNSESMGLEGLFRETADYILSLQM 93
Query: 103 RVRVMQVMVDVLTGYDD 119
RV +MQ+MV VL+ D
Sbjct: 94 RVNLMQIMVKVLSSDSD 110
>E9JWE3_BRAOC (tr|E9JWE3) BHLH1 transcription factor OS=Brassica oleracea var.
capitata PE=4 SV=1
Length = 102
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 59 GNRRGTVAIQKRVRTLKRLVPNSDSM-GLDGLFRETADYILALQTRVRVMQVMVDVLTGY 117
+RR AI KRV+TLK LVPN+ S GLDGLFR+TADYILAL+ +VRVMQ MV VLT
Sbjct: 40 ASRRPCRAIHKRVKTLKELVPNTKSAEGLDGLFRQTADYILALEMKVRVMQTMVQVLTET 99
Query: 118 D 118
D
Sbjct: 100 D 100
>M4CJT1_BRARP (tr|M4CJT1) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra004465 PE=4 SV=1
Length = 102
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 54 KRRRGGNRRGTVAIQKRVRTLKRLVPNS-DSMGLDGLFRETADYILALQTRVRVMQVMVD 112
K+ +RR AI KRV+TLK LVPN+ S GLDGLFR+TADYILAL+ +VRVMQ MV
Sbjct: 35 KKNLEASRRPCRAIHKRVKTLKELVPNTKSSEGLDGLFRQTADYILALEMKVRVMQTMVQ 94
Query: 113 VLTGYD 118
VLT D
Sbjct: 95 VLTETD 100
>R0HHH6_9BRAS (tr|R0HHH6) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10025386mg PE=4 SV=1
Length = 102
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 6/73 (8%)
Query: 47 RPRGILMKRRRGGNRRGTVAIQKRVRTLKRLVPNSD-SMGLDGLFRETADYILALQTRVR 105
RPR L +RR AI +RV+TLK LVPN+ S GLDGLFR+TADYILAL+ +VR
Sbjct: 33 RPRKSL-----EASRRPCRAIHRRVKTLKELVPNTKTSEGLDGLFRQTADYILALEMKVR 87
Query: 106 VMQVMVDVLTGYD 118
VMQ MV VLT D
Sbjct: 88 VMQTMVQVLTETD 100
>D7LGL5_ARALL (tr|D7LGL5) Transcription factor/ transcription regulator
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483904
PE=4 SV=1
Length = 103
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 6/73 (8%)
Query: 47 RPRGILMKRRRGGNRRGTVAIQKRVRTLKRLVPNSD-SMGLDGLFRETADYILALQTRVR 105
RPR L +RR AI +RV+TLK LVPN+ S GLDGLFR+TADYILAL+ +VR
Sbjct: 34 RPRKSL-----EASRRPCRAIHRRVKTLKELVPNTKTSEGLDGLFRQTADYILALEMKVR 88
Query: 106 VMQVMVDVLTGYD 118
VMQ MV VLT +
Sbjct: 89 VMQTMVQVLTETN 101
>M4DXZ9_BRARP (tr|M4DXZ9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra021395 PE=4 SV=1
Length = 104
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 61 RRGTVAIQKRVRTLKRLVPN--SDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYD 118
RR + AI +RV+TLK LVPN S S GLDGL R+TADYILAL+ +VRVMQ M LT D
Sbjct: 43 RRPSRAIHRRVKTLKELVPNTKSSSAGLDGLLRQTADYILALERKVRVMQTMFQALTETD 102
>M1AB71_SOLTU (tr|M1AB71) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401007298 PE=4 SV=1
Length = 117
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 67 IQKRVRTLKRLVP-NSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLT 115
I ++VR LK+L+P N + +GL+G+FRETADYILAL+ RV+VMQ MV+VL+
Sbjct: 63 IGRKVRVLKKLIPINCEDLGLEGIFRETADYILALEMRVKVMQDMVNVLS 112
>K4C3Y1_SOLLC (tr|K4C3Y1) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc06g009510.1 PE=4 SV=1
Length = 113
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 67 IQKRVRTLKRLVP-NSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLT 115
I +V+ LK+L+P N + +GL+G+FRETADYILAL+ R++ MQ MV+VL+
Sbjct: 60 IGSKVKILKKLIPINCEDLGLEGIFRETADYILALEMRIKAMQDMVNVLS 109
>K4AXH2_SOLLC (tr|K4AXH2) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc01g079270.1 PE=4 SV=1
Length = 127
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%), Gaps = 4/55 (7%)
Query: 68 QKRVRTLKRLVPN----SDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYD 118
+K V+ L++L+PN S SMGL+ LFRETADYI AL+ +V+VM+++V+VL+ D
Sbjct: 71 EKNVKMLEKLIPNCEPLSSSMGLERLFRETADYIWALEMKVKVMKMIVNVLSTPD 125
>M1AI94_SOLTU (tr|M1AI94) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400009058 PE=4 SV=1
Length = 127
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 44/56 (78%), Gaps = 4/56 (7%)
Query: 67 IQKRVRTLKRLVPN----SDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYD 118
++K+V+ L++L+PN S SMGL+ +FRE ADYI AL+ +V+VM+++V+VL+ D
Sbjct: 70 VEKKVKMLEKLIPNCESLSSSMGLERIFREAADYIWALEMKVKVMKMIVNVLSTPD 125
>M5X9Z9_PRUPE (tr|M5X9Z9) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppb024904mg PE=4 SV=1
Length = 150
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 13/65 (20%)
Query: 54 KRRRGGNRRGTV------------AIQKRVRTLKRLVPNSDS-MGLDGLFRETADYILAL 100
KRRR +RGT+ IQ+RV+TLKRL+P +DS GLDGLFRET DYIL+L
Sbjct: 50 KRRRILKKRGTLKRLQQSARMRSNGIQRRVKTLKRLIPKTDSSTGLDGLFRETVDYILSL 109
Query: 101 QTRVR 105
Q+R R
Sbjct: 110 QSRGR 114
>B9SRC9_RICCO (tr|B9SRC9) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0614040 PE=4 SV=1
Length = 139
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 71 VRTLKRLVPNSDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYD 118
+ LKR+VP + +G+D LF ETADYILALQ +++ M+ + + L G +
Sbjct: 84 ILALKRIVPGGECLGIDKLFEETADYILALQCQIKAMKALSNFLEGME 131