Miyakogusa Predicted Gene

Lj5g3v1811580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1811580.1 tr|G7I519|G7I519_MEDTR Inter-alpha-trypsin
inhibitor heavy chain H3 OS=Medicago truncatula
GN=MTR_1g,75.36,8e-19,seg,NULL,101833_g.1
         (69 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7I519_MEDTR (tr|G7I519) Inter-alpha-trypsin inhibitor heavy cha...    93   4e-17
B9T7C4_RICCO (tr|B9T7C4) Protein binding protein, putative OS=Ri...    74   2e-11
B9HLK2_POPTR (tr|B9HLK2) Predicted protein OS=Populus trichocarp...    72   8e-11
B9HUG4_POPTR (tr|B9HUG4) Predicted protein OS=Populus trichocarp...    71   1e-10
F6GU18_VITVI (tr|F6GU18) Putative uncharacterized protein OS=Vit...    63   4e-08
A5BI34_VITVI (tr|A5BI34) Putative uncharacterized protein OS=Vit...    63   4e-08
Q9FF49_ARATH (tr|Q9FF49) C3H4 type zinc finger protein OS=Arabid...    61   1e-07
Q8L849_ARATH (tr|Q8L849) Putative uncharacterized protein At5g60...    61   1e-07
M4CLH9_BRARP (tr|M4CLH9) Uncharacterized protein OS=Brassica rap...    60   3e-07
M4DUP1_BRARP (tr|M4DUP1) Uncharacterized protein OS=Brassica rap...    57   2e-06
M4ERB8_BRARP (tr|M4ERB8) Uncharacterized protein OS=Brassica rap...    57   2e-06
M4D2F6_BRARP (tr|M4D2F6) Uncharacterized protein OS=Brassica rap...    57   3e-06
D7LUX5_ARALL (tr|D7LUX5) Zinc finger family protein OS=Arabidops...    57   3e-06
Q8S9I2_ARATH (tr|Q8S9I2) At2g38970/T7F6.14 OS=Arabidopsis thalia...    56   4e-06
F4IU12_ARATH (tr|F4IU12) C3HC4-type RING finger-containing prote...    56   4e-06
Q9M1S2_ARATH (tr|Q9M1S2) Putative uncharacterized protein T5N23_...    55   6e-06
F4JE23_ARATH (tr|F4JE23) C3HC4-type RING finger protein OS=Arabi...    55   6e-06
F4JE22_ARATH (tr|F4JE22) C3HC4-type RING finger protein OS=Arabi...    55   6e-06
F4JE24_ARATH (tr|F4JE24) C3HC4-type RING finger protein OS=Arabi...    55   6e-06
M4CE25_BRARP (tr|M4CE25) Uncharacterized protein OS=Brassica rap...    55   9e-06

>G7I519_MEDTR (tr|G7I519) Inter-alpha-trypsin inhibitor heavy chain H3
          OS=Medicago truncatula GN=MTR_1g094830 PE=4 SV=1
          Length = 779

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 9/66 (13%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLL--------SSRQTTP 52
          MGSKWKKAKVALGLNLCMFVPRTLDD+  PPSTVVSERLSDA+LL        SS+ TTP
Sbjct: 1  MGSKWKKAKVALGLNLCMFVPRTLDDDF-PPSTVVSERLSDAALLSPVNWDKGSSQPTTP 59

Query: 53 VQSFNG 58
          V SF+G
Sbjct: 60 VSSFHG 65


>B9T7C4_RICCO (tr|B9T7C4) Protein binding protein, putative OS=Ricinus communis
          GN=RCOM_0092810 PE=4 SV=1
          Length = 728

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 7/63 (11%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS-----SRQTTPVQS 55
          MGSKW+KAK+ALGLNLC++VPRTL+D   PP T  SERLSDA+LLS     SR  TP  S
Sbjct: 1  MGSKWRKAKLALGLNLCVYVPRTLEDS--PPQTQSSERLSDAALLSPANWDSRPMTPTPS 58

Query: 56 FNG 58
           +G
Sbjct: 59 SHG 61


>B9HLK2_POPTR (tr|B9HLK2) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_563731 PE=4 SV=1
          Length = 713

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 9/63 (14%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS-----SRQTTPVQS 55
          MGSKW+KAK+ALGLNLC++VPRTLDD + P     SERLSDA+LLS     SR  TP  S
Sbjct: 1  MGSKWRKAKLALGLNLCVYVPRTLDDSAAPS----SERLSDAALLSPTNWDSRPMTPTPS 56

Query: 56 FNG 58
           +G
Sbjct: 57 SHG 59


>B9HUG4_POPTR (tr|B9HUG4) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_770549 PE=4 SV=1
          Length = 714

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 9/63 (14%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS-----SRQTTPVQS 55
          MGSKW+KAK+ALGLNLC++VPRTLDD + P     SERLSDA+LLS     SR  TP  S
Sbjct: 1  MGSKWRKAKLALGLNLCVYVPRTLDDSAAPS----SERLSDAALLSPKNWDSRPMTPTPS 56

Query: 56 FNG 58
           +G
Sbjct: 57 SHG 59


>F6GU18_VITVI (tr|F6GU18) Putative uncharacterized protein OS=Vitis vinifera
          GN=VIT_06s0004g02630 PE=2 SV=1
          Length = 729

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 2/46 (4%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          MGSKW+KAK+ALGLNLC++VP+TL+D S  PS  V  R SDA LLS
Sbjct: 1  MGSKWRKAKLALGLNLCVYVPQTLEDSS--PSMDVGRRYSDAVLLS 44


>A5BI34_VITVI (tr|A5BI34) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_037547 PE=2 SV=1
          Length = 1324

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 2/46 (4%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          MGSKW+KAK+ALGLNLC++VP+TL+D S  PS  V  R SDA LLS
Sbjct: 1  MGSKWRKAKLALGLNLCVYVPQTLEDSS--PSMDVGRRYSDAVLLS 44


>Q9FF49_ARATH (tr|Q9FF49) C3H4 type zinc finger protein OS=Arabidopsis thaliana
          GN=AT5G60710 PE=4 SV=1
          Length = 704

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 2/58 (3%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLSSRQTTPVQSFNG 58
          MGSKW+KAKVALGLNLC++VP+TL+D SPP  +   + +S + ++  R +TP  S +G
Sbjct: 1  MGSKWRKAKVALGLNLCLYVPKTLEDSSPPRRS--DDAVSLSPVIVQRPSTPTPSSSG 56


>Q8L849_ARATH (tr|Q8L849) Putative uncharacterized protein At5g60710
          OS=Arabidopsis thaliana GN=At5g60710 PE=2 SV=1
          Length = 704

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 2/58 (3%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLSSRQTTPVQSFNG 58
          MGSKW+KAKVALGLNLC+++P+TL+D SPP  +   + +S + ++  R +TP  S +G
Sbjct: 1  MGSKWRKAKVALGLNLCLYIPKTLEDSSPPRRS--DDAVSLSPVIVQRPSTPTPSSSG 56


>M4CLH9_BRARP (tr|M4CLH9) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra005066 PE=4 SV=1
          Length = 656

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 2/46 (4%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          MG+KW+K K+ALGLNLC ++PRTL  E  PP+   +ERLSD +LLS
Sbjct: 1  MGTKWRKMKLALGLNLCTYLPRTL--EESPPALNSTERLSDVALLS 44


>M4DUP1_BRARP (tr|M4DUP1) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra020234 PE=4 SV=1
          Length = 695

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 12/62 (19%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS----SRQTTPVQSF 56
          MGSKW+KAK+ALG+NLC++VP+TL++E        S R +DA  LS     R TTPV S 
Sbjct: 1  MGSKWRKAKIALGVNLCLYVPKTLEEE--------SRRSNDAVSLSPVTVPRPTTPVPSS 52

Query: 57 NG 58
          +G
Sbjct: 53 SG 54


>M4ERB8_BRARP (tr|M4ERB8) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra031341 PE=4 SV=1
          Length = 251

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 4/58 (6%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLSSRQTTPVQSFNG 58
          MGSKW+KAK+ALG+NLC++VP+TL++ES   +  VS  LS  ++   R TTPV S +G
Sbjct: 1  MGSKWRKAKIALGVNLCLYVPKTLEEESRTSNNAVS--LSPVTV--PRPTTPVPSSSG 54


>M4D2F6_BRARP (tr|M4D2F6) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra010656 PE=4 SV=1
          Length = 253

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 4/58 (6%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLSSRQTTPVQSFNG 58
          MGSKW+KAK+ALG+NLC++VP+TL++ES   +  VS  LS  ++   R TTPV S +G
Sbjct: 1  MGSKWRKAKIALGVNLCLYVPKTLEEESRTSNNAVS--LSPVTV--PRPTTPVPSSSG 54


>D7LUX5_ARALL (tr|D7LUX5) Zinc finger family protein OS=Arabidopsis lyrata
          subsp. lyrata GN=ARALYDRAFT_324008 PE=4 SV=1
          Length = 672

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          M SKWKK K+AL LNLC ++PRTL++E P  +   +E LSDA+LLS
Sbjct: 1  MVSKWKKMKLALSLNLCTYLPRTLEEEPPSSALNSTESLSDAALLS 46


>Q8S9I2_ARATH (tr|Q8S9I2) At2g38970/T7F6.14 OS=Arabidopsis thaliana
          GN=At2g38970 PE=2 SV=1
          Length = 692

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 2/46 (4%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          MG++W++ K+ALGLNLC ++PRTL +ESP P    +ERLSD +LLS
Sbjct: 1  MGTRWRRMKLALGLNLCTYLPRTL-EESPTPLN-STERLSDVALLS 44


>F4IU12_ARATH (tr|F4IU12) C3HC4-type RING finger-containing protein
          OS=Arabidopsis thaliana GN=AT2G38970 PE=2 SV=1
          Length = 692

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 2/46 (4%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          MG++W++ K+ALGLNLC ++PRTL +ESP P    +ERLSD +LLS
Sbjct: 1  MGTRWRRMKLALGLNLCTYLPRTL-EESPTPLN-STERLSDVALLS 44


>Q9M1S2_ARATH (tr|Q9M1S2) Putative uncharacterized protein T5N23_140
          OS=Arabidopsis thaliana GN=T5N23_140 PE=4 SV=1
          Length = 676

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          M SKWKK K+AL LNLC ++PRTL++E P  +   +E LSDA+LLS
Sbjct: 1  MVSKWKKMKLALSLNLCNYLPRTLEEEPPSLALNSAETLSDAALLS 46


>F4JE23_ARATH (tr|F4JE23) C3HC4-type RING finger protein OS=Arabidopsis
          thaliana GN=AT3G54780 PE=4 SV=1
          Length = 675

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          M SKWKK K+AL LNLC ++PRTL++E P  +   +E LSDA+LLS
Sbjct: 1  MVSKWKKMKLALSLNLCNYLPRTLEEEPPSLALNSAETLSDAALLS 46


>F4JE22_ARATH (tr|F4JE22) C3HC4-type RING finger protein OS=Arabidopsis
          thaliana GN=AT3G54780 PE=4 SV=1
          Length = 633

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          M SKWKK K+AL LNLC ++PRTL++E P  +   +E LSDA+LLS
Sbjct: 1  MVSKWKKMKLALSLNLCNYLPRTLEEEPPSLALNSAETLSDAALLS 46


>F4JE24_ARATH (tr|F4JE24) C3HC4-type RING finger protein OS=Arabidopsis
          thaliana GN=AT3G54780 PE=4 SV=1
          Length = 632

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          M SKWKK K+AL LNLC ++PRTL++E P  +   +E LSDA+LLS
Sbjct: 1  MVSKWKKMKLALSLNLCNYLPRTLEEEPPSLALNSAETLSDAALLS 46


>M4CE25_BRARP (tr|M4CE25) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra002456 PE=4 SV=1
          Length = 700

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 5/46 (10%)

Query: 1  MGSKWKKAKVALGLNLCMFVPRTLDDESPPPSTVVSERLSDASLLS 46
          MGSKW+KAK+ALGLNLC++VP+TLD+     S+ +S R +DA  LS
Sbjct: 1  MGSKWRKAKLALGLNLCLYVPKTLDE-----SSSLSRRSNDAVSLS 41