Miyakogusa Predicted Gene

Lj5g3v0626660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626660.1 Non Chatacterized Hit- tr|B9SGP8|B9SGP8_RICCO
DNA-binding protein S1FA, putative OS=Ricinus
communis,71.23,0.0000000000005,seg,NULL; S1FA,DNA binding protein
S1FA,CUFF.53558.1
         (76 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T218_LOTJA (tr|I3T218) Uncharacterized protein OS=Lotus japoni...    64   2e-08

>I3T218_LOTJA (tr|I3T218) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 76

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 42/76 (55%)

Query: 1  MADDVGNGINDSGSKGINPXXXXXXXXXXXXXXXXXXNYVLYIYAQKTLPPRXXXXXXXX 60
          MADDVGNGINDSGSKGINP                  NYVLYIYAQKTLPPR        
Sbjct: 1  MADDVGNGINDSGSKGINPGLIVLLVVAGLVLVFLVGNYVLYIYAQKTLPPRKKKPISKK 60

Query: 61 XXXXXXXXQGISAPGE 76
                  QGISAPGE
Sbjct: 61 KMKKEKLKQGISAPGE 76