Miyakogusa Predicted Gene

Lj5g3v0510910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0510910.1 tr|O81977|O81977_SOYBN Rudimentary enhancer
(Fragment) OS=Glycine max PE=2 SV=1,87.1,0.0000007,ERH-like,NULL;
ER,Enhancer of
rudimentary,gene.Ljchr5_pseudomol_20120830.path1.gene1014.1
         (34 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6TKU9_SOYBN (tr|C6TKU9) Enhancer of rudimentary homolog OS=Glyc...    58   1e-06
I1MX63_SOYBN (tr|I1MX63) Enhancer of rudimentary homolog OS=Glyc...    58   1e-06
O81977_SOYBN (tr|O81977) Rudimentary enhancer (Fragment) OS=Glyc...    58   1e-06
K4CIF8_SOLLC (tr|K4CIF8) Uncharacterized protein OS=Solanum lyco...    57   2e-06
M1CHJ6_SOLTU (tr|M1CHJ6) Enhancer of rudimentary homolog OS=Sola...    57   2e-06
C6SZS7_SOYBN (tr|C6SZS7) Enhancer of rudimentary homolog OS=Glyc...    57   3e-06
A9PI27_POPTR (tr|A9PI27) Enhancer of rudimentary homolog OS=Popu...    57   3e-06

>C6TKU9_SOYBN (tr|C6TKU9) Enhancer of rudimentary homolog OS=Glycine max PE=3
          SV=1
          Length = 102

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTIILMQTS NRATRTFMDY SITQAM+ 
Sbjct: 3  NRHTIILMQTSQNRATRTFMDYESITQAMDG 33


>I1MX63_SOYBN (tr|I1MX63) Enhancer of rudimentary homolog OS=Glycine max PE=3
          SV=1
          Length = 102

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTIILMQTS NRATRTFMDY SITQAM+ 
Sbjct: 3  NRHTIILMQTSQNRATRTFMDYESITQAMDG 33


>O81977_SOYBN (tr|O81977) Rudimentary enhancer (Fragment) OS=Glycine max PE=2
          SV=1
          Length = 125

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTIILMQTS NRATRTFMDY SITQAM+ 
Sbjct: 26 NRHTIILMQTSQNRATRTFMDYESITQAMDG 56


>K4CIF8_SOLLC (tr|K4CIF8) Uncharacterized protein OS=Solanum lycopersicum
          GN=Solyc08g006700.2 PE=4 SV=1
          Length = 73

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTI+LMQTS NRATRTFMDY SI+QAM+ 
Sbjct: 3  NRHTIVLMQTSQNRATRTFMDYESISQAMDG 33


>M1CHJ6_SOLTU (tr|M1CHJ6) Enhancer of rudimentary homolog OS=Solanum tuberosum
          GN=PGSC0003DMG400026283 PE=3 SV=1
          Length = 104

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTI+LMQTS NRATRTFMDY SI+QAM+ 
Sbjct: 3  NRHTIVLMQTSQNRATRTFMDYESISQAMDG 33


>C6SZS7_SOYBN (tr|C6SZS7) Enhancer of rudimentary homolog OS=Glycine max PE=3
          SV=1
          Length = 102

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 27/31 (87%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTIILMQ S NRATRTFMDY SITQAM+ 
Sbjct: 3  NRHTIILMQASQNRATRTFMDYESITQAMDG 33


>A9PI27_POPTR (tr|A9PI27) Enhancer of rudimentary homolog OS=Populus
          trichocarpa GN=POPTRDRAFT_737394 PE=3 SV=1
          Length = 102

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 4  NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          NRHTI+LMQTS NRATRTFMDY SI+QAM+ 
Sbjct: 3  NRHTIVLMQTSQNRATRTFMDYDSISQAMDG 33