Miyakogusa Predicted Gene

Lj5g3v0105860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0105860.1 tr|G7IST4|G7IST4_MEDTR G-box binding factor bZIP
transcription factor OS=Medicago truncatula
GN=MTR_,21.18,0.00000003,RVT_3,NULL; Ribonuclease H-like,Ribonuclease
H-like domain,gene.g58347.t1.1
         (210 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7LIU3_SOYBN (tr|K7LIU3) Uncharacterized protein OS=Glycine max ...    90   6e-16
B9T5J0_RICCO (tr|B9T5J0) Putative uncharacterized protein OS=Ric...    59   1e-06
K7KX09_SOYBN (tr|K7KX09) Uncharacterized protein (Fragment) OS=G...    56   8e-06

>K7LIU3_SOYBN (tr|K7LIU3) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 329

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 117/268 (43%), Gaps = 67/268 (25%)

Query: 7   CPLYAMEPETAVHSLLLCSFAQAVWFTCPLGLQVATC-PVGSVSQFLAER-VSEADEVVI 64
           CP+    PET  H+LLLC  A+ VWF  PLGL+V +   V ++SQ++ +  V   D+  +
Sbjct: 57  CPICGRLPETVTHALLLCDDAKLVWFASPLGLRVESLRGVSTLSQWIDQYCVDTLDDEAM 116

Query: 65  VCAAAVMEALWECRNKVVF----------------------------------------- 83
               A M ALW  RN  VF                                         
Sbjct: 117 GVVCATMWALWHRRNAWVFHSKGMDCMQVLAKASSMFVVVPDGPDAWVLPSSPYVKVNFA 176

Query: 84  ---EDGVAT--------------AATTSCLE-HALSPAVAEAQAFRWAVILAQELFFQDV 125
              +D V T              A+ T+ LE     P +AEA  ++WA+  + +L F ++
Sbjct: 177 AAVKDNVGTAMGMIFRDSFGTTRASGTNFLEDECFEPQIAEALCYKWALEQSGDLGFSEI 236

Query: 126 HLETDCYSFYEAW--LKGG---DETYMGMLIRDCLLLSGNFRSFHVSFIRRTGNMAADFM 180
             ETDC   Y  W  LK G   D++Y+  L+ +C+++     S  +  +R T N  A  +
Sbjct: 237 IFETDCQKLYIQWNQLKQGKASDDSYLHSLLEECIMMIQGTGS-SLRLVRPTANKVAQCL 295

Query: 181 AKLAYSDPERVWVEDVAEGLSDILYSNL 208
           A +A+   E+VW+  V E +S  L S++
Sbjct: 296 ADVAFDYGEKVWMGVVPEEVSSHLQSDM 323


>B9T5J0_RICCO (tr|B9T5J0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0157780 PE=4 SV=1
          Length = 142

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 105 AEAQAFRWAVILAQELFFQDVHLETDCYSFYEAWLKGGDETY--MGMLIRDCLLLSGNFR 162
           AEA+A RW ++LA++  F+ + +E+D  +   + LKG  E +  +G +I D   +  +F 
Sbjct: 34  AEAEAVRWGLLLAKDAGFRVLDVESD-NAHSISMLKGNQENFTELGTIIDDIKFICRDFS 92

Query: 163 SFHVSFIRRTGNMAADFMAKLAYSDPERVWVEDVAEGLSDIL 204
           S   S + R  N  A  +A L  S  +RVW+E+V    S++L
Sbjct: 93  SIVWSHVNRVCNKVAHMVASLTNSTTDRVWIENVPNKCSELL 134


>K7KX09_SOYBN (tr|K7KX09) Uncharacterized protein (Fragment) OS=Glycine max PE=4
           SV=1
          Length = 210

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 86  GVATAATTSCLEHALSPAVAEAQAFRWAVILAQELFFQDVHLETDCYSFYEAWL---KGG 142
           G    A     E  L P  AEA A+R AV+   EL       ETDC   Y  W    KGG
Sbjct: 92  GQVLVAAMKFTESELEPREAEALAYRRAVLTMNELCIFGAEYETDCMQLYNEWNRSDKGG 151

Query: 143 DETYMGMLIRDCLLLSGNFRSFHVSFIRRTGNMAADFMAKLAYSDPERVWVE 194
              + G L+ +   L     S  ++F +R GN AA  +A LA+S  +R W++
Sbjct: 152 RSLFHG-LVEETRRLDPVAGSQKLNFDKRQGNKAAHCLANLAFSLLDRCWID 202