Miyakogusa Predicted Gene

Lj4g3v2400890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2400890.1 Non Chatacterized Hit- tr|I1KNA8|I1KNA8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17400 PE,90,0.0000009,
,AV780028.path1.1
         (38 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7L3V8_SOYBN (tr|K7L3V8) Uncharacterized protein OS=Glycine max ...    58   1e-06
B7FL50_MEDTR (tr|B7FL50) DEAD-box ATP-dependent RNA helicase OS=...    57   3e-06

>K7L3V8_SOYBN (tr|K7L3V8) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 537

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/30 (90%), Positives = 27/30 (90%)

Query: 6   ICDTKRKLQTLLSLIQSDTPESGIIFVGEQ 35
           ICDTKRKL TLLSLIQSD PESGIIFV EQ
Sbjct: 374 ICDTKRKLHTLLSLIQSDAPESGIIFVAEQ 403


>B7FL50_MEDTR (tr|B7FL50) DEAD-box ATP-dependent RNA helicase OS=Medicago
           truncatula GN=MTR_4g131750 PE=2 SV=1
          Length = 480

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/30 (86%), Positives = 27/30 (90%)

Query: 6   ICDTKRKLQTLLSLIQSDTPESGIIFVGEQ 35
           +CD KRKLQTLLSLIQSD PESGIIFV EQ
Sbjct: 317 VCDIKRKLQTLLSLIQSDAPESGIIFVSEQ 346