Miyakogusa Predicted Gene

Lj4g3v2313730.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2313730.3 Non Chatacterized Hit- tr|F6HE30|F6HE30_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.78,1.6,seg,NULL,CUFF.50776.3
         (99 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SKU7_LOTJA (tr|I3SKU7) Uncharacterized protein OS=Lotus japoni...    91   1e-16

>I3SKU7_LOTJA (tr|I3SKU7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 276

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 55/85 (64%), Gaps = 11/85 (12%)

Query: 1  MGNLLVKNSASGSLRFWRKRKDNNKHXXXXXXXXXXXXPWEPFVPLTDEERAETGILRYS 60
          MGNLLVKNSASGSLRFWRKRKDNNKH            PWEPFVPLTDEERAE  +L +S
Sbjct: 1  MGNLLVKNSASGSLRFWRKRKDNNKHVVSEDSSLEEEVPWEPFVPLTDEERAEI-LLAFS 59

Query: 61 A------ICYDYCSISYGGLFPAGK 79
          A      + +D  S+      PAGK
Sbjct: 60 ADREKVLVTHDKTSVE----IPAGK 80