Miyakogusa Predicted Gene
- Lj4g3v2267660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2267660.1 CUFF.50667.1
(114 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A5AGZ7_VITVI (tr|A5AGZ7) DNA-directed RNA polymerase subunit OS=... 192 5e-47
C6SXF5_SOYBN (tr|C6SXF5) DNA-directed RNA polymerase subunit OS=... 191 5e-47
M5XGV0_PRUPE (tr|M5XGV0) Uncharacterized protein OS=Prunus persi... 191 6e-47
I1KMS4_SOYBN (tr|I1KMS4) DNA-directed RNA polymerase subunit OS=... 191 9e-47
I1MGG3_SOYBN (tr|I1MGG3) DNA-directed RNA polymerase subunit OS=... 190 2e-46
M1CLI8_SOLTU (tr|M1CLI8) DNA-directed RNA polymerase subunit OS=... 187 9e-46
K4C223_SOLLC (tr|K4C223) DNA-directed RNA polymerase subunit OS=... 187 9e-46
Q2HU21_MEDTR (tr|Q2HU21) DNA-directed RNA polymerase subunit OS=... 187 1e-45
M0REP7_MUSAM (tr|M0REP7) DNA-directed RNA polymerase subunit OS=... 187 2e-45
D8RZ30_SELML (tr|D8RZ30) DNA-directed RNA polymerase subunit OS=... 186 3e-45
B6TRW3_MAIZE (tr|B6TRW3) DNA-directed RNA polymerase subunit OS=... 184 9e-45
J3NE50_ORYBR (tr|J3NE50) DNA-directed RNA polymerase subunit OS=... 183 1e-44
C5YPS4_SORBI (tr|C5YPS4) DNA-directed RNA polymerase subunit OS=... 183 2e-44
Q2QNM4_ORYSJ (tr|Q2QNM4) DNA-directed RNA polymerase subunit OS=... 182 3e-44
I1R770_ORYGL (tr|I1R770) DNA-directed RNA polymerase subunit OS=... 182 3e-44
A2ZLM4_ORYSI (tr|A2ZLM4) DNA-directed RNA polymerase subunit OS=... 182 3e-44
B9HIQ4_POPTR (tr|B9HIQ4) DNA-directed RNA polymerase subunit OS=... 182 3e-44
M4FHJ2_BRARP (tr|M4FHJ2) DNA-directed RNA polymerase subunit OS=... 182 3e-44
I1IHJ8_BRADI (tr|I1IHJ8) DNA-directed RNA polymerase subunit OS=... 181 7e-44
F2E4K0_HORVD (tr|F2E4K0) DNA-directed RNA polymerase subunit OS=... 181 7e-44
M4EXL3_BRARP (tr|M4EXL3) DNA-directed RNA polymerase subunit OS=... 181 8e-44
M0TF02_MUSAM (tr|M0TF02) DNA-directed RNA polymerase subunit OS=... 181 8e-44
D7L697_ARALL (tr|D7L697) DNA-directed RNA polymerase subunit OS=... 180 2e-43
Q6NLH0_ARATH (tr|Q6NLH0) DNA-directed RNA polymerase subunit OS=... 180 2e-43
R0F742_9BRAS (tr|R0F742) Uncharacterized protein OS=Capsella rub... 179 3e-43
Q8L5V0_ARATH (tr|Q8L5V0) DNA-directed RNA polymerase subunit OS=... 179 3e-43
D7M9X1_ARALL (tr|D7M9X1) DNA-directed RNA polymerase subunit OS=... 179 3e-43
D8QRR8_SELML (tr|D8QRR8) DNA-directed RNA polymerase subunit OS=... 179 4e-43
R0I7I6_9BRAS (tr|R0I7I6) Uncharacterized protein OS=Capsella rub... 179 4e-43
A9TUT9_PHYPA (tr|A9TUT9) DNA-directed RNA polymerase subunit OS=... 178 7e-43
K3ZAV9_SETIT (tr|K3ZAV9) DNA-directed RNA polymerase subunit OS=... 177 9e-43
K4AJE7_SETIT (tr|K4AJE7) DNA-directed RNA polymerase subunit OS=... 177 1e-42
M0RW66_MUSAM (tr|M0RW66) DNA-directed RNA polymerase subunit OS=... 176 4e-42
N1QSI6_AEGTA (tr|N1QSI6) DNA-directed RNA polymerase II subunit ... 175 4e-42
K3YAZ3_SETIT (tr|K3YAZ3) DNA-directed RNA polymerase subunit OS=... 174 1e-41
C5YC89_SORBI (tr|C5YC89) DNA-directed RNA polymerase subunit OS=... 173 2e-41
B6T3H5_MAIZE (tr|B6T3H5) DNA-directed RNA polymerase subunit OS=... 173 2e-41
C5YZB6_SORBI (tr|C5YZB6) DNA-directed RNA polymerase subunit OS=... 172 3e-41
Q10T38_ORYSJ (tr|Q10T38) DNA-directed RNA polymerase subunit OS=... 169 3e-40
B8AL10_ORYSI (tr|B8AL10) DNA-directed RNA polymerase subunit OS=... 169 3e-40
J3LJ01_ORYBR (tr|J3LJ01) DNA-directed RNA polymerase subunit OS=... 168 5e-40
I1HAW3_BRADI (tr|I1HAW3) DNA-directed RNA polymerase subunit OS=... 165 5e-39
M0SRL6_MUSAM (tr|M0SRL6) DNA-directed RNA polymerase subunit OS=... 165 6e-39
Q0IMM9_ORYSJ (tr|Q0IMM9) DNA-directed RNA polymerase subunit (Fr... 164 1e-38
B9RZN6_RICCO (tr|B9RZN6) DNA-directed RNA polymerase subunit OS=... 160 1e-37
K3ZY78_SETIT (tr|K3ZY78) DNA-directed RNA polymerase subunit OS=... 158 8e-37
Q10T39_ORYSJ (tr|Q10T39) DNA-directed RNA polymerase subunit OS=... 157 2e-36
I1P6L3_ORYGL (tr|I1P6L3) DNA-directed RNA polymerase subunit OS=... 157 2e-36
C5Y7V5_SORBI (tr|C5Y7V5) Putative uncharacterized protein Sb05g0... 157 2e-36
J3MMZ0_ORYBR (tr|J3MMZ0) DNA-directed RNA polymerase subunit OS=... 153 2e-35
B6UEU6_MAIZE (tr|B6UEU6) DNA-directed RNA polymerase subunit OS=... 153 2e-35
B6U7D6_MAIZE (tr|B6U7D6) DNA-directed RNA polymerase subunit OS=... 152 3e-35
B9HWY2_POPTR (tr|B9HWY2) DNA-directed RNA polymerase subunit OS=... 152 5e-35
F2DTN6_HORVD (tr|F2DTN6) DNA-directed RNA polymerase subunit (Fr... 147 1e-33
Q8GSD5_ORYSJ (tr|Q8GSD5) DNA-directed RNA polymerase subunit OS=... 146 2e-33
I1QC61_ORYGL (tr|I1QC61) DNA-directed RNA polymerase subunit OS=... 146 2e-33
B6U3L3_MAIZE (tr|B6U3L3) DNA-directed RNA polymerase subunit OS=... 145 5e-33
Q0D4N8_ORYSJ (tr|Q0D4N8) DNA-directed RNA polymerase subunit OS=... 136 3e-30
N1QRZ5_AEGTA (tr|N1QRZ5) DNA-directed RNA polymerase II subunit ... 134 1e-29
M7ZSI9_TRIUA (tr|M7ZSI9) DNA-directed RNA polymerase II subunit ... 134 1e-29
I1GS55_BRADI (tr|I1GS55) DNA-directed RNA polymerase subunit OS=... 131 1e-28
C3XRA2_BRAFL (tr|C3XRA2) DNA-directed RNA polymerase subunit OS=... 128 9e-28
H2ZKE3_CIOSA (tr|H2ZKE3) DNA-directed RNA polymerase subunit (Fr... 126 2e-27
K7V0D4_MAIZE (tr|K7V0D4) Uncharacterized protein OS=Zea mays GN=... 125 5e-27
K7VS28_MAIZE (tr|K7VS28) Uncharacterized protein OS=Zea mays GN=... 125 6e-27
F2E3D5_HORVD (tr|F2E3D5) Predicted protein (Fragment) OS=Hordeum... 124 2e-26
K1QHM9_CRAGI (tr|K1QHM9) DNA-directed RNA polymerase subunit OS=... 123 2e-26
C4WT20_ACYPI (tr|C4WT20) DNA-directed RNA polymerase subunit OS=... 121 7e-26
D2A4H0_TRICA (tr|D2A4H0) DNA-directed RNA polymerase subunit OS=... 121 9e-26
H9L0B5_CHICK (tr|H9L0B5) DNA-directed RNA polymerase subunit OS=... 120 1e-25
G1N8X3_MELGA (tr|G1N8X3) DNA-directed RNA polymerase subunit OS=... 120 1e-25
B7PRG9_IXOSC (tr|B7PRG9) DNA-directed RNA polymerase subunit OS=... 120 2e-25
L8Y4S9_TUPCH (tr|L8Y4S9) DNA-directed RNA polymerase subunit OS=... 120 2e-25
B5FX75_TAEGU (tr|B5FX75) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H2MDN2_ORYLA (tr|H2MDN2) DNA-directed RNA polymerase subunit OS=... 120 2e-25
L8HW61_BOSMU (tr|L8HW61) DNA-directed RNA polymerase subunit (Fr... 120 2e-25
R4FN54_RHOPR (tr|R4FN54) Putative rna polymerase ii subunit 9 OS... 120 2e-25
I3MDG9_SPETR (tr|I3MDG9) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H0VKN8_CAVPO (tr|H0VKN8) DNA-directed RNA polymerase subunit OS=... 120 2e-25
G5BK10_HETGA (tr|G5BK10) DNA-directed RNA polymerase subunit OS=... 120 2e-25
D4A531_RAT (tr|D4A531) DNA-directed RNA polymerase subunit OS=Ra... 120 2e-25
M3Y2V4_MUSPF (tr|M3Y2V4) DNA-directed RNA polymerase subunit OS=... 120 2e-25
M3X8K0_FELCA (tr|M3X8K0) DNA-directed RNA polymerase subunit OS=... 120 2e-25
L5LT90_MYODS (tr|L5LT90) DNA-directed RNA polymerase subunit OS=... 120 2e-25
L5L2W2_PTEAL (tr|L5L2W2) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H2QG57_PANTR (tr|H2QG57) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H2NYJ8_PONAB (tr|H2NYJ8) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H0XWT9_OTOGA (tr|H0XWT9) DNA-directed RNA polymerase subunit OS=... 120 2e-25
G7PXC1_MACFA (tr|G7PXC1) DNA-directed RNA polymerase subunit OS=... 120 2e-25
G3TFB9_LOXAF (tr|G3TFB9) DNA-directed RNA polymerase subunit OS=... 120 2e-25
G1TAL1_RABIT (tr|G1TAL1) DNA-directed RNA polymerase subunit OS=... 120 2e-25
G1RLW6_NOMLE (tr|G1RLW6) DNA-directed RNA polymerase subunit OS=... 120 2e-25
G1PKA1_MYOLU (tr|G1PKA1) DNA-directed RNA polymerase subunit OS=... 120 2e-25
F7IC64_CALJA (tr|F7IC64) DNA-directed RNA polymerase subunit OS=... 120 2e-25
F7A420_MACMU (tr|F7A420) DNA-directed RNA polymerase subunit OS=... 120 2e-25
F6ZTX6_HORSE (tr|F6ZTX6) DNA-directed RNA polymerase subunit OS=... 120 2e-25
F6U7C7_MONDO (tr|F6U7C7) DNA-directed RNA polymerase subunit OS=... 120 2e-25
F1MZ35_BOVIN (tr|F1MZ35) DNA-directed RNA polymerase subunit OS=... 120 2e-25
E2QYJ4_CANFA (tr|E2QYJ4) DNA-directed RNA polymerase subunit OS=... 120 2e-25
D2HFU4_AILME (tr|D2HFU4) DNA-directed RNA polymerase subunit (Fr... 120 2e-25
M3ZFL0_XIPMA (tr|M3ZFL0) DNA-directed RNA polymerase subunit OS=... 120 2e-25
Q1LVK2_DANRE (tr|Q1LVK2) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H3AMM8_LATCH (tr|H3AMM8) DNA-directed RNA polymerase subunit OS=... 120 2e-25
E2B8V2_HARSA (tr|E2B8V2) DNA-directed RNA polymerase subunit OS=... 120 2e-25
Q5EAU6_XENLA (tr|Q5EAU6) DNA-directed RNA polymerase subunit OS=... 120 2e-25
H9IFB5_ATTCE (tr|H9IFB5) DNA-directed RNA polymerase subunit OS=... 119 3e-25
F4WJS5_ACREC (tr|F4WJS5) DNA-directed RNA polymerase subunit OS=... 119 3e-25
G1TVU5_RABIT (tr|G1TVU5) DNA-directed RNA polymerase subunit OS=... 119 3e-25
Q4S925_TETNG (tr|Q4S925) DNA-directed RNA polymerase subunit (Fr... 119 4e-25
H2RKA8_TAKRU (tr|H2RKA8) DNA-directed RNA polymerase subunit OS=... 119 4e-25
M4V062_SALSA (tr|M4V062) DNA-directed RNA polymerase II subunit ... 119 4e-25
I3JD43_ORENI (tr|I3JD43) DNA-directed RNA polymerase subunit OS=... 119 4e-25
C1BGM4_ONCMY (tr|C1BGM4) DNA-directed RNA polymerase subunit OS=... 119 4e-25
G3NU38_GASAC (tr|G3NU38) DNA-directed RNA polymerase subunit OS=... 119 4e-25
B0W4J8_CULQU (tr|B0W4J8) DNA-directed RNA polymerase subunit OS=... 119 5e-25
Q1HRD6_AEDAE (tr|Q1HRD6) DNA-directed RNA polymerase subunit OS=... 119 5e-25
H9KLW8_APIME (tr|H9KLW8) DNA-directed RNA polymerase subunit OS=... 118 7e-25
J3JUM6_9CUCU (tr|J3JUM6) DNA-directed RNA polymerase subunit OS=... 118 7e-25
Q5XJ93_DANRE (tr|Q5XJ93) DNA-directed RNA polymerase subunit OS=... 118 9e-25
I1G153_AMPQE (tr|I1G153) DNA-directed RNA polymerase subunit OS=... 118 9e-25
G3MMZ4_9ACAR (tr|G3MMZ4) DNA-directed RNA polymerase subunit OS=... 117 1e-24
A7SXH3_NEMVE (tr|A7SXH3) DNA-directed RNA polymerase subunit OS=... 117 1e-24
C1BH34_ONCMY (tr|C1BH34) DNA-directed RNA polymerase subunit OS=... 117 1e-24
K7IM61_NASVI (tr|K7IM61) DNA-directed RNA polymerase subunit OS=... 117 1e-24
R7TJF0_9ANNE (tr|R7TJF0) Uncharacterized protein OS=Capitella te... 117 1e-24
Q7Q4H0_ANOGA (tr|Q7Q4H0) DNA-directed RNA polymerase subunit (Fr... 117 2e-24
L7M473_9ACAR (tr|L7M473) DNA-directed RNA polymerase subunit OS=... 117 2e-24
E3TF07_ICTPU (tr|E3TF07) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B7FNR6_DROME (tr|B7FNR6) DNA-directed RNA polymerase subunit (Fr... 117 2e-24
B4NAN1_DROWI (tr|B4NAN1) DNA-directed RNA polymerase subunit OS=... 117 2e-24
Q299B2_DROPS (tr|Q299B2) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B4G4Z3_DROPE (tr|B4G4Z3) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B4QZW6_DROSI (tr|B4QZW6) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B4PT93_DROYA (tr|B4PT93) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B4HEP4_DROSE (tr|B4HEP4) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B3P0P5_DROER (tr|B3P0P5) DNA-directed RNA polymerase subunit OS=... 117 2e-24
B3LZX4_DROAN (tr|B3LZX4) DNA-directed RNA polymerase subunit OS=... 115 5e-24
B4MBD3_DROVI (tr|B4MBD3) DNA-directed RNA polymerase subunit OS=... 115 5e-24
F0ZUL3_DICPU (tr|F0ZUL3) DNA-directed RNA polymerase subunit OS=... 115 6e-24
C1BNL8_9MAXI (tr|C1BNL8) DNA-directed RNA polymerase subunit OS=... 115 7e-24
H9JEJ3_BOMMO (tr|H9JEJ3) DNA-directed RNA polymerase subunit OS=... 115 7e-24
A8QDP3_BRUMA (tr|A8QDP3) DNA-directed RNA polymerase subunit OS=... 114 1e-23
B4JS70_DROGR (tr|B4JS70) DNA-directed RNA polymerase subunit OS=... 114 1e-23
E1ZLF2_CHLVA (tr|E1ZLF2) DNA-directed RNA polymerase subunit OS=... 113 2e-23
J0M906_LOALO (tr|J0M906) DNA-directed RNA polymerase subunit OS=... 113 2e-23
G6CYH4_DANPL (tr|G6CYH4) DNA-directed RNA polymerase subunit OS=... 113 2e-23
J9BJ75_WUCBA (tr|J9BJ75) DNA-directed RNA polymerase subunit OS=... 113 2e-23
E9GM94_DAPPU (tr|E9GM94) DNA-directed RNA polymerase subunit OS=... 113 3e-23
I0YSV9_9CHLO (tr|I0YSV9) DNA-directed RNA polymerase subunit OS=... 112 5e-23
G3RHC8_GORGO (tr|G3RHC8) DNA-directed RNA polymerase subunit (Fr... 111 1e-22
F1LCI4_ASCSU (tr|F1LCI4) DNA-directed RNA polymerase subunit OS=... 110 1e-22
Q55GG8_DICDI (tr|Q55GG8) DNA-directed RNA polymerase subunit OS=... 109 4e-22
B3RJJ7_TRIAD (tr|B3RJJ7) DNA-directed RNA polymerase subunit OS=... 108 4e-22
E9IFN8_SOLIN (tr|E9IFN8) DNA-directed RNA polymerase subunit (Fr... 108 5e-22
H3HQP8_STRPU (tr|H3HQP8) DNA-directed RNA polymerase subunit OS=... 107 1e-21
K7FXT0_PELSI (tr|K7FXT0) DNA-directed RNA polymerase subunit OS=... 107 2e-21
D3YYI3_MOUSE (tr|D3YYI3) DNA-directed RNA polymerase subunit OS=... 107 2e-21
G4V5C0_SCHMA (tr|G4V5C0) DNA-directed RNA polymerase subunit OS=... 106 3e-21
H3ERC9_PRIPA (tr|H3ERC9) DNA-directed RNA polymerase subunit OS=... 105 4e-21
Q5DAX2_SCHJA (tr|Q5DAX2) DNA-directed RNA polymerase subunit OS=... 105 7e-21
H2XG41_CAEJA (tr|H2XG41) DNA-directed RNA polymerase subunit OS=... 104 1e-20
Q965S0_CAEEL (tr|Q965S0) DNA-directed RNA polymerase subunit OS=... 104 1e-20
K8F4F7_9CHLO (tr|K8F4F7) DNA-directed RNA polymerase subunit OS=... 103 2e-20
C1FE61_MICSR (tr|C1FE61) DNA-directed RNA polymerase subunit OS=... 103 2e-20
J9K2S8_ACYPI (tr|J9K2S8) Uncharacterized protein OS=Acyrthosipho... 103 2e-20
I2FTT9_USTH4 (tr|I2FTT9) DNA-directed RNA polymerase subunit OS=... 102 5e-20
G0NIZ1_CAEBE (tr|G0NIZ1) DNA-directed RNA polymerase subunit OS=... 102 5e-20
B4KC63_DROMO (tr|B4KC63) DNA-directed RNA polymerase subunit OS=... 101 8e-20
E3M0N8_CAERE (tr|E3M0N8) DNA-directed RNA polymerase subunit OS=... 101 1e-19
M9M518_9BASI (tr|M9M518) RNA polymerase II subunit 9 OS=Pseudozy... 101 1e-19
E6ZRU1_SPORE (tr|E6ZRU1) DNA-directed RNA polymerase subunit OS=... 100 1e-19
F9X7U2_MYCGM (tr|F9X7U2) DNA-directed RNA polymerase subunit OS=... 100 2e-19
M2LWU2_9PEZI (tr|M2LWU2) DNA-directed RNA polymerase subunit OS=... 100 2e-19
D3BKZ5_POLPA (tr|D3BKZ5) RNA polymerase II core subunit OS=Polys... 100 2e-19
B6JXI0_SCHJY (tr|B6JXI0) DNA-directed RNA polymerase subunit OS=... 99 4e-19
K0THW0_THAOC (tr|K0THW0) Uncharacterized protein OS=Thalassiosir... 99 4e-19
C5XE10_SORBI (tr|C5XE10) Putative uncharacterized protein Sb02g0... 99 6e-19
R1BD52_EMIHU (tr|R1BD52) Uncharacterized protein OS=Emiliania hu... 98 9e-19
G0RSS4_HYPJQ (tr|G0RSS4) DNA-directed RNA polymerase subunit OS=... 98 1e-18
Q6QAQ8_PIG (tr|Q6QAQ8) DNA-directed RNA polymerase subunit (Frag... 98 1e-18
F4PHW6_DICFS (tr|F4PHW6) RNA polymerase II core subunit OS=Dicty... 98 1e-18
A5DYL7_LODEL (tr|A5DYL7) DNA-directed RNA polymerase subunit OS=... 97 1e-18
K3ZLI8_SETIT (tr|K3ZLI8) Uncharacterized protein OS=Setaria ital... 97 1e-18
Q59Z24_CANAL (tr|Q59Z24) DNA-directed RNA polymerase subunit OS=... 97 2e-18
C4YK21_CANAW (tr|C4YK21) DNA-directed RNA polymerase subunit OS=... 97 2e-18
C7Z7Z8_NECH7 (tr|C7Z7Z8) DNA-directed RNA polymerase subunit OS=... 97 2e-18
A3LYD6_PICST (tr|A3LYD6) DNA-directed RNA polymerase subunit OS=... 97 2e-18
B9WC06_CANDC (tr|B9WC06) DNA-directed RNA polymerase subunit OS=... 97 3e-18
A4RSQ4_OSTLU (tr|A4RSQ4) DNA-directed RNA polymerase subunit OS=... 97 3e-18
E0W154_PEDHC (tr|E0W154) DNA-directed RNA polymerase subunit OS=... 96 3e-18
N4U3W5_FUSOX (tr|N4U3W5) DNA-directed RNA polymerase II subunit ... 96 3e-18
A8XD45_CAEBR (tr|A8XD45) DNA-directed RNA polymerase subunit OS=... 96 3e-18
Q6BK95_DEBHA (tr|Q6BK95) DNA-directed RNA polymerase subunit OS=... 96 4e-18
F2QPE6_PICP7 (tr|F2QPE6) DNA-directed RNA polymerase subunit OS=... 96 5e-18
C5M7A5_CANTT (tr|C5M7A5) DNA-directed RNA polymerase subunit OS=... 96 5e-18
D7M9S4_ARALL (tr|D7M9S4) Putative uncharacterized protein OS=Ara... 96 5e-18
L8FV90_GEOD2 (tr|L8FV90) DNA-directed RNA polymerase subunit OS=... 96 6e-18
G3B167_CANTC (tr|G3B167) DNA-directed RNA polymerase subunit OS=... 96 6e-18
B7FQG9_PHATC (tr|B7FQG9) Predicted protein OS=Phaeodactylum tric... 95 8e-18
Q4UDQ7_THEAN (tr|Q4UDQ7) DNA-directed RNA polymerase 2 subunit, ... 95 8e-18
B6Q946_PENMQ (tr|B6Q946) DNA-directed RNA polymerase subunit OS=... 95 8e-18
B8BUI2_THAPS (tr|B8BUI2) Predicted protein OS=Thalassiosira pseu... 95 9e-18
C1MJZ9_MICPC (tr|C1MJZ9) Predicted protein OS=Micromonas pusilla... 95 1e-17
G9NC40_HYPVG (tr|G9NC40) DNA-directed RNA polymerase subunit OS=... 95 1e-17
Q4N5T6_THEPA (tr|Q4N5T6) DNA-directed RNA polymerase II subunit,... 95 1e-17
H8X3A3_CANO9 (tr|H8X3A3) DNA-directed RNA polymerase subunit OS=... 95 1e-17
G8BJN0_CANPC (tr|G8BJN0) DNA-directed RNA polymerase subunit OS=... 95 1e-17
D8LE56_ECTSI (tr|D8LE56) DNA-directed RNA polymerase subunit OS=... 94 1e-17
I4YGT0_WALSC (tr|I4YGT0) DNA-directed RNA polymerase subunit OS=... 94 1e-17
C9SDJ5_VERA1 (tr|C9SDJ5) DNA-directed RNA polymerase subunit OS=... 94 2e-17
G3AKQ8_SPAPN (tr|G3AKQ8) DNA-directed RNA polymerase subunit OS=... 94 2e-17
A5DAZ0_PICGU (tr|A5DAZ0) DNA-directed RNA polymerase subunit OS=... 94 2e-17
B6Q947_PENMQ (tr|B6Q947) DNA-directed RNA polymerase subunit OS=... 93 3e-17
K1W766_MARBU (tr|K1W766) DNA-directed RNA polymerase subunit OS=... 93 3e-17
C6H4I7_AJECH (tr|C6H4I7) DNA-directed RNA polymerase subunit OS=... 93 4e-17
C0NM38_AJECG (tr|C0NM38) DNA-directed RNA polymerase subunit OS=... 93 4e-17
F2TFA7_AJEDA (tr|F2TFA7) DNA-directed RNA polymerase subunit OS=... 93 4e-17
M3JEB9_CANMA (tr|M3JEB9) DNA-directed RNA polymerase subunit (Fr... 93 4e-17
J7S026_KAZNA (tr|J7S026) DNA-directed RNA polymerase subunit OS=... 93 4e-17
M7U8U9_BOTFU (tr|M7U8U9) Putative dna-directed rna polymerase ii... 92 4e-17
G2YW94_BOTF4 (tr|G2YW94) DNA-directed RNA polymerase subunit OS=... 92 4e-17
G2R9N3_THITE (tr|G2R9N3) DNA-directed RNA polymerase subunit OS=... 92 4e-17
C4YCH6_CLAL4 (tr|C4YCH6) DNA-directed RNA polymerase subunit OS=... 92 5e-17
G8YGC5_PICSO (tr|G8YGC5) DNA-directed RNA polymerase subunit OS=... 92 6e-17
F2SK76_TRIRC (tr|F2SK76) DNA-directed RNA polymerase subunit OS=... 92 6e-17
F2RQI4_TRIT1 (tr|F2RQI4) DNA-directed RNA polymerase subunit OS=... 92 6e-17
F2PLZ2_TRIEC (tr|F2PLZ2) DNA-directed RNA polymerase subunit OS=... 92 6e-17
F7WAW3_SORMK (tr|F7WAW3) DNA-directed RNA polymerase subunit OS=... 92 6e-17
E9DD97_COCPS (tr|E9DD97) DNA-directed RNA polymerase subunit OS=... 92 6e-17
C5PHU6_COCP7 (tr|C5PHU6) DNA-directed RNA polymerase subunit OS=... 92 6e-17
C1GD69_PARBD (tr|C1GD69) DNA-directed RNA polymerase subunit OS=... 92 6e-17
C0SHR0_PARBP (tr|C0SHR0) DNA-directed RNA polymerase subunit OS=... 92 6e-17
M2TGR4_COCHE (tr|M2TGR4) DNA-directed RNA polymerase subunit OS=... 92 6e-17
M2T2X2_COCSA (tr|M2T2X2) DNA-directed RNA polymerase subunit OS=... 92 6e-17
E4UQ25_ARTGP (tr|E4UQ25) DNA-directed RNA polymerase subunit (Fr... 92 6e-17
J3KHZ9_COCIM (tr|J3KHZ9) DNA-directed RNA polymerase subunit OS=... 92 7e-17
R0JRC2_SETTU (tr|R0JRC2) Uncharacterized protein OS=Setosphaeria... 92 7e-17
K7UD45_MAIZE (tr|K7UD45) Uncharacterized protein OS=Zea mays GN=... 92 7e-17
B2WH54_PYRTR (tr|B2WH54) DNA-directed RNA polymerase subunit OS=... 92 8e-17
C5E010_ZYGRC (tr|C5E010) DNA-directed RNA polymerase subunit OS=... 91 1e-16
B6H263_PENCW (tr|B6H263) DNA-directed RNA polymerase subunit OS=... 91 1e-16
G7Y6B1_CLOSI (tr|G7Y6B1) DNA-directed RNA polymerase subunit OS=... 91 1e-16
B8NBS3_ASPFN (tr|B8NBS3) DNA-directed RNA polymerase subunit OS=... 91 1e-16
G8JP49_ERECY (tr|G8JP49) DNA-directed RNA polymerase subunit OS=... 91 1e-16
N1P3K7_YEASX (tr|N1P3K7) Rpb9p OS=Saccharomyces cerevisiae CEN.P... 91 2e-16
J8Q267_SACAR (tr|J8Q267) DNA-directed RNA polymerase subunit OS=... 91 2e-16
G2WE27_YEASK (tr|G2WE27) DNA-directed RNA polymerase subunit OS=... 91 2e-16
C8Z8H7_YEAS8 (tr|C8Z8H7) DNA-directed RNA polymerase subunit OS=... 91 2e-16
C7GW42_YEAS2 (tr|C7GW42) DNA-directed RNA polymerase subunit OS=... 91 2e-16
B3LHD8_YEAS1 (tr|B3LHD8) DNA-directed RNA polymerase subunit OS=... 91 2e-16
A6ZUA7_YEAS7 (tr|A6ZUA7) DNA-directed RNA polymerase subunit OS=... 91 2e-16
I2GZ09_TETBL (tr|I2GZ09) DNA-directed RNA polymerase subunit OS=... 91 2e-16
A7TJ44_VANPO (tr|A7TJ44) DNA-directed RNA polymerase subunit OS=... 91 2e-16
B0D4Y9_LACBS (tr|B0D4Y9) DNA-directed RNA polymerase subunit OS=... 90 2e-16
Q6CS79_KLULA (tr|Q6CS79) DNA-directed RNA polymerase subunit OS=... 90 2e-16
G3XVC2_ASPNA (tr|G3XVC2) DNA-directed RNA polymerase subunit OS=... 90 3e-16
H2AS70_KAZAF (tr|H2AS70) DNA-directed RNA polymerase subunit OS=... 90 3e-16
F8PRL2_SERL3 (tr|F8PRL2) DNA-directed RNA polymerase subunit OS=... 89 4e-16
F8NRR5_SERL9 (tr|F8NRR5) DNA-directed RNA polymerase subunit OS=... 89 4e-16
M9N2K7_ASHGS (tr|M9N2K7) FAFL088Wp OS=Ashbya gossypii FDAG1 GN=F... 89 5e-16
G8ZVW9_TORDC (tr|G8ZVW9) DNA-directed RNA polymerase subunit OS=... 89 5e-16
A7AUU3_BABBO (tr|A7AUU3) DNA-directed RNA polymerase subunit OS=... 89 5e-16
L0P9R5_PNEJ8 (tr|L0P9R5) I WGS project CAKM00000000 data, strain... 89 5e-16
G7XHL1_ASPKW (tr|G7XHL1) DNA-directed RNA polymerase subunit OS=... 89 6e-16
Q4X1W6_ASPFU (tr|Q4X1W6) DNA-directed RNA polymerase subunit OS=... 89 8e-16
C5E2E3_LACTC (tr|C5E2E3) DNA-directed RNA polymerase subunit OS=... 88 1e-15
E3JRV9_PUCGT (tr|E3JRV9) DNA-directed RNA polymerase subunit OS=... 88 1e-15
D8TP01_VOLCA (tr|D8TP01) DNA-directed RNA polymerase subunit OS=... 88 1e-15
A8IJY1_CHLRE (tr|A8IJY1) DNA-directed RNA polymerase subunit OS=... 87 1e-15
G0VEH0_NAUCC (tr|G0VEH0) DNA-directed RNA polymerase subunit OS=... 87 2e-15
G0WFW7_NAUDC (tr|G0WFW7) DNA-directed RNA polymerase subunit OS=... 87 2e-15
G8BTZ7_TETPH (tr|G8BTZ7) DNA-directed RNA polymerase subunit OS=... 87 2e-15
M7NWW6_9ASCO (tr|M7NWW6) Uncharacterized protein OS=Pneumocystis... 87 2e-15
M3D5Q4_9PEZI (tr|M3D5Q4) DNA-directed RNA polymerase subunit OS=... 87 2e-15
F4P640_BATDJ (tr|F4P640) Putative uncharacterized protein OS=Bat... 86 4e-15
L0AU47_BABEQ (tr|L0AU47) DNA-directed RNA polymerase II, putativ... 86 5e-15
F4S6R3_MELLP (tr|F4S6R3) DNA-directed RNA polymerase subunit OS=... 86 5e-15
R7QDA7_CHOCR (tr|R7QDA7) Stackhouse genomic scaffold, scaffold_2... 86 7e-15
L1IS88_GUITH (tr|L1IS88) RNA polymerase II subunit 9, RPB9 OS=Gu... 85 8e-15
K3XT04_SETIT (tr|K3XT04) Uncharacterized protein OS=Setaria ital... 85 9e-15
M2PKN9_CERSU (tr|M2PKN9) DNA-directed RNA polymerase subunit OS=... 85 1e-14
F1LFF0_ASCSU (tr|F1LFF0) DNA-directed RNA polymerase subunit OS=... 84 1e-14
D5GJJ3_TUBMM (tr|D5GJJ3) DNA-directed RNA polymerase subunit OS=... 84 1e-14
A8NUD2_COPC7 (tr|A8NUD2) DNA-directed RNA polymerase subunit OS=... 84 2e-14
D3Z3Z8_MOUSE (tr|D3Z3Z8) DNA-directed RNA polymerase II subunit ... 84 2e-14
F2UPM8_SALS5 (tr|F2UPM8) DNA-directed RNA polymerase subunit OS=... 84 2e-14
N1PQE0_MYCPJ (tr|N1PQE0) Uncharacterized protein OS=Dothistroma ... 84 2e-14
K5W0I9_PHACS (tr|K5W0I9) DNA-directed RNA polymerase subunit OS=... 84 2e-14
E9CIE0_CAPO3 (tr|E9CIE0) DNA-directed RNA polymerase subunit OS=... 84 2e-14
C4QY79_PICPG (tr|C4QY79) DNA-directed RNA polymerase subunit OS=... 84 2e-14
J4D726_THEOR (tr|J4D726) DNA-directed RNA polymerase 2 subunit O... 83 3e-14
N1JHF9_ERYGR (tr|N1JHF9) DNA directed RNA polymerase II OS=Blume... 83 3e-14
K9HCK3_AGABB (tr|K9HCK3) DNA-directed RNA polymerase subunit OS=... 83 4e-14
K5VV09_AGABU (tr|K5VV09) DNA-directed RNA polymerase subunit OS=... 83 4e-14
J9DJR3_EDHAE (tr|J9DJR3) DNA-directed RNA polymerase subunit OS=... 82 5e-14
M5GB67_DACSP (tr|M5GB67) Uncharacterized protein OS=Dacryopinax ... 81 1e-13
Q55M04_CRYNB (tr|Q55M04) DNA-directed RNA polymerase subunit OS=... 81 1e-13
M1V4U3_CYAME (tr|M1V4U3) DNA-directed RNA polymerase subunit OS=... 81 1e-13
E4Y3U6_OIKDI (tr|E4Y3U6) Whole genome shotgun assembly, allelic ... 81 2e-13
J9VLW5_CRYNH (tr|J9VLW5) DNA-directed RNA polymerase subunit OS=... 80 2e-13
L8H6X7_ACACA (tr|L8H6X7) DNA-directed RNA polymerase II family p... 80 2e-13
M5E798_MALSM (tr|M5E798) Genomic scaffold, msy_sf_4 OS=Malassezi... 80 3e-13
B4FHU6_MAIZE (tr|B4FHU6) Uncharacterized protein OS=Zea mays PE=... 80 3e-13
L8WWC9_9HOMO (tr|L8WWC9) DNA-directed RNA polymerase subunit OS=... 80 3e-13
E2A7R3_CAMFO (tr|E2A7R3) DNA-directed RNA polymerase subunit OS=... 80 4e-13
I7IR83_BABMI (tr|I7IR83) Chromosome III, complete sequence OS=Ba... 79 4e-13
K7EKS1_HUMAN (tr|K7EKS1) DNA-directed RNA polymerase II subunit ... 79 4e-13
G4N0C4_MAGO7 (tr|G4N0C4) DNA-directed RNA polymerase subunit OS=... 79 5e-13
A2QZ75_ASPNC (tr|A2QZ75) DNA-directed RNA polymerase subunit OS=... 79 5e-13
I3ERG1_NEMP1 (tr|I3ERG1) Uncharacterized protein OS=Nematocida p... 78 1e-12
I3EJD3_NEMP3 (tr|I3EJD3) Uncharacterized protein OS=Nematocida p... 78 1e-12
E5S407_TRISP (tr|E5S407) DNA-directed RNA polymerase II subunit ... 78 1e-12
G4TRD7_PIRID (tr|G4TRD7) DNA-directed RNA polymerase subunit OS=... 77 1e-12
G4Z0G3_PHYSP (tr|G4Z0G3) Bacterial MDR-like protein OS=Phytophth... 76 4e-12
B6KIX4_TOXGO (tr|B6KIX4) DNA-directed RNA polymerase II subunit,... 76 5e-12
Q6C1C2_YARLI (tr|Q6C1C2) DNA-directed RNA polymerase subunit OS=... 75 6e-12
D2VT19_NAEGR (tr|D2VT19) Predicted protein OS=Naegleria gruberi ... 75 7e-12
B6AGF8_CRYMR (tr|B6AGF8) DNA-directed RNA polymerase subunit OS=... 75 1e-11
F0VFD8_NEOCL (tr|F0VFD8) Putative uncharacterized protein OS=Neo... 74 1e-11
E7LUD3_YEASV (tr|E7LUD3) DNA-directed RNA polymerase subunit OS=... 74 2e-11
K3WZX2_PYTUL (tr|K3WZX2) Uncharacterized protein OS=Pythium ulti... 74 2e-11
Q4DHB0_TRYCC (tr|Q4DHB0) DNA-direcetd RNA polymerase II, subunit... 74 3e-11
J4TYE8_SACK1 (tr|J4TYE8) DNA-directed RNA polymerase subunit OS=... 74 3e-11
H0GUT3_9SACH (tr|H0GUT3) DNA-directed RNA polymerase subunit OS=... 74 3e-11
E7QET4_YEASZ (tr|E7QET4) DNA-directed RNA polymerase subunit OS=... 74 3e-11
Q4DME4_TRYCC (tr|Q4DME4) DNA-direcetd RNA polymerase II, subunit... 73 3e-11
D8LZL2_BLAHO (tr|D8LZL2) DNA-directed RNA polymerase subunit OS=... 73 3e-11
H8ZA53_NEMS1 (tr|H8ZA53) Putative uncharacterized protein OS=Nem... 73 3e-11
R7YR94_9EURO (tr|R7YR94) Uncharacterized protein OS=Coniosporium... 73 3e-11
D8SSK1_SELML (tr|D8SSK1) Putative uncharacterized protein (Fragm... 73 3e-11
D8Q896_SCHCM (tr|D8Q896) DNA-directed RNA polymerase subunit OS=... 73 4e-11
F0W9D1_9STRA (tr|F0W9D1) Putative uncharacterized protein AlNc14... 72 8e-11
B9HWY4_POPTR (tr|B9HWY4) Predicted protein OS=Populus trichocarp... 72 9e-11
D8SZF1_SELML (tr|D8SZF1) Putative uncharacterized protein (Fragm... 72 1e-10
C5KKK6_PERM5 (tr|C5KKK6) DNA-directed RNA polymerase 2 subunit, ... 71 1e-10
Q5CUQ6_CRYPI (tr|Q5CUQ6) DNA-directed RNA polymerase 2 subunit O... 71 1e-10
Q5CPB7_CRYHO (tr|Q5CPB7) DNA-directed RNA polymerase 2 subunit O... 71 1e-10
C5LSH6_PERM5 (tr|C5LSH6) DNA-directed RNA polymerase 2 subunit, ... 71 1e-10
G0UBU7_TRYVY (tr|G0UBU7) Putative DNA-direcetd RNA polymerase II... 71 1e-10
E0SA06_ENCIT (tr|E0SA06) DNA-directed RNA polymerase subunit M O... 71 1e-10
R0KQF5_NOSBO (tr|R0KQF5) DNA-directed RNA polymerase II subunit ... 71 2e-10
H3GGA9_PHYRM (tr|H3GGA9) Uncharacterized protein OS=Phytophthora... 71 2e-10
Q8I241_PLAF7 (tr|Q8I241) DNA-directed RNA polymerase 2, putative... 70 3e-10
Q384T7_TRYB2 (tr|Q384T7) DNA-direcetd RNA polymerase II, subunit... 70 3e-10
D0A7R2_TRYB9 (tr|D0A7R2) DNA-direcetd RNA polymerase II, subunit... 70 3e-10
L2GTR7_VAVCU (tr|L2GTR7) Uncharacterized protein OS=Vavraia culi... 69 4e-10
M7WTQ0_RHOTO (tr|M7WTQ0) DNA-directed RNA polymerase II subunit ... 69 5e-10
E4X8A4_OIKDI (tr|E4X8A4) Whole genome shotgun assembly, referenc... 69 6e-10
Q4YUV5_PLABA (tr|Q4YUV5) DNA-directed RNA polymerase ii 15.1 kDa... 68 9e-10
G7DXC9_MIXOS (tr|G7DXC9) DNA-directed RNA polymerase subunit OS=... 68 1e-09
M1K2L2_ENCCN (tr|M1K2L2) DNA-directed RNA polymerase II subunit ... 68 1e-09
L7JSK6_TRAHO (tr|L7JSK6) RNA polymerase II subunit 9 OS=Trachipl... 68 1e-09
M1WCJ6_CLAPU (tr|M1WCJ6) Related to DNA-directed RNA polymerase ... 67 2e-09
C5KP35_PERM5 (tr|C5KP35) DNA-directed RNA polymerase ii 15.1 kDa... 67 3e-09
I7AH27_ENCRO (tr|I7AH27) DNA-directed RNA polymerase subunit M O... 67 3e-09
Q7SBJ7_NEUCR (tr|Q7SBJ7) Predicted protein OS=Neurospora crassa ... 67 3e-09
G4UQV8_NEUT9 (tr|G4UQV8) Uncharacterized protein OS=Neurospora t... 67 3e-09
F8MLJ9_NEUT8 (tr|F8MLJ9) Putative uncharacterized protein OS=Neu... 67 3e-09
R9AQ49_WALIC (tr|R9AQ49) DNA-directed RNA polymerase II subunit ... 66 3e-09
Q7RSD7_PLAYO (tr|Q7RSD7) DNA-directed RNA polymerase ii 15.1 kDa... 66 4e-09
F9FKV3_FUSOF (tr|F9FKV3) Uncharacterized protein OS=Fusarium oxy... 66 5e-09
N1RPY4_FUSOX (tr|N1RPY4) DNA-directed RNA polymerase II subunit ... 65 6e-09
E9E0D6_METAQ (tr|E9E0D6) DNA directed RNA polymerase II 15 kDa s... 65 7e-09
K3W2U6_FUSPC (tr|K3W2U6) Uncharacterized protein OS=Fusarium pse... 65 8e-09
J5JGN0_BEAB2 (tr|J5JGN0) RNA polymerase M/15 kDa subunit OS=Beau... 65 9e-09
G0S3M1_CHATD (tr|G0S3M1) Putative uncharacterized protein OS=Cha... 65 9e-09
I1RR25_GIBZE (tr|I1RR25) Uncharacterized protein OS=Gibberella z... 65 9e-09
M0WGZ4_HORVD (tr|M0WGZ4) Uncharacterized protein OS=Hordeum vulg... 65 1e-08
I6TMC6_ENCHA (tr|I6TMC6) Putative DNA-directed RNA polymerase tr... 65 1e-08
E9F4B2_METAR (tr|E9F4B2) DNA directed RNA polymerase II 15 kDa s... 64 1e-08
C6A1Y3_THESM (tr|C6A1Y3) DNA-directed RNA polymerase subunit OS=... 64 2e-08
L2FTC5_COLGN (tr|L2FTC5) DNA directed RNA polymerase ii 15 kDa O... 64 2e-08
J9MHR9_FUSO4 (tr|J9MHR9) Uncharacterized protein (Fragment) OS=F... 64 2e-08
H3ZPL5_THELI (tr|H3ZPL5) DNA-directed RNA polymerase subunit OS=... 64 2e-08
C4JEG2_UNCRE (tr|C4JEG2) Predicted protein OS=Uncinocarpus reesi... 64 2e-08
B8M1I8_TALSN (tr|B8M1I8) DNA directed RNA polymerase II 15 kDa s... 64 2e-08
G3JNL8_CORMM (tr|G3JNL8) DNA directed RNA polymerase II 15 kDa s... 64 2e-08
A5KDM5_PLAVS (tr|A5KDM5) DNA-directed RNA polymerase 2 subunit, ... 64 2e-08
A7EUD0_SCLS1 (tr|A7EUD0) Putative uncharacterized protein OS=Scl... 64 3e-08
B6Q948_PENMQ (tr|B6Q948) DNA directed RNA polymerase II 15 kDa s... 63 3e-08
A0E475_PARTE (tr|A0E475) Chromosome undetermined scaffold_78, wh... 63 4e-08
N4VJG6_COLOR (tr|N4VJG6) DNA directed RNA polymerase ii 15 kDa O... 63 4e-08
G9P7A9_HYPAI (tr|G9P7A9) Putative uncharacterized protein OS=Hyp... 63 4e-08
M7AP92_CHEMY (tr|M7AP92) DNA-directed RNA polymerase II subunit ... 63 5e-08
B3KZH4_PLAKH (tr|B3KZH4) Dna-directed rna polymerase 2 subunit, ... 62 5e-08
E3QYN4_COLGM (tr|E3QYN4) DNA-directed RNA polymerase subunit OS=... 62 5e-08
N4WJU5_COCHE (tr|N4WJU5) Uncharacterized protein OS=Bipolaris ma... 62 7e-08
H1VQB8_COLHI (tr|H1VQB8) DNA-directed RNA polymerase subunit (Fr... 62 8e-08
F0U8U2_AJEC8 (tr|F0U8U2) DNA directed RNA polymerase II 15 kDa s... 62 8e-08
R8BKG2_9PEZI (tr|R8BKG2) Putative dna directed rna polymerase ii... 62 9e-08
C5JZV2_AJEDS (tr|C5JZV2) DNA directed RNA polymerase II 15 kDa s... 62 9e-08
C5G6X9_AJEDR (tr|C5G6X9) DNA directed RNA polymerase II 15 kDa s... 62 9e-08
B2AV79_PODAN (tr|B2AV79) DNA-directed RNA polymerase subunit OS=... 62 1e-07
F0XNX3_GROCL (tr|F0XNX3) DNA directed RNA polymerase 2 OS=Grosma... 62 1e-07
C5FPN9_ARTOC (tr|C5FPN9) Putative uncharacterized protein OS=Art... 61 1e-07
K7U530_MAIZE (tr|K7U530) Uncharacterized protein OS=Zea mays GN=... 61 1e-07
E9AZH3_LEIMU (tr|E9AZH3) DNA-direcetd RNA polymerase II, subunit... 61 1e-07
K9FYH8_PEND2 (tr|K9FYH8) DNA-directed RNA polymerase subunit OS=... 61 1e-07
K9FAL7_PEND1 (tr|K9FAL7) DNA-directed RNA polymerase subunit OS=... 61 1e-07
C1H9R9_PARBA (tr|C1H9R9) Uncharacterized protein OS=Paracoccidio... 61 1e-07
Q4X293_PLACH (tr|Q4X293) DNA-directed RNA polymerase 2 subunit, ... 61 1e-07
A6RCK2_AJECN (tr|A6RCK2) DNA-directed RNA polymerase subunit OS=... 61 1e-07
Q0C9E4_ASPTN (tr|Q0C9E4) Putative uncharacterized protein OS=Asp... 61 1e-07
R7VYB4_COLLI (tr|R7VYB4) DNA-directed RNA polymerase II subunit ... 60 2e-07
G9KHS5_MUSPF (tr|G9KHS5) Polymerase II polypeptide I, 14.5kDa (F... 60 2e-07
Q0U3A2_PHANO (tr|Q0U3A2) Putative uncharacterized protein OS=Pha... 60 2e-07
Q2TZH6_ASPOR (tr|Q2TZH6) Predicted protein OS=Aspergillus oryzae... 60 2e-07
I8IIY7_ASPO3 (tr|I8IIY7) Uncharacterized protein OS=Aspergillus ... 60 2e-07
B9PUJ5_TOXGO (tr|B9PUJ5) DNA-directed RNA polymerase II subunit,... 60 2e-07
F0YQ08_AURAN (tr|F0YQ08) Putative uncharacterized protein (Fragm... 60 2e-07
Q4Q8Q8_LEIMA (tr|Q4Q8Q8) Putative DNA-direcetd RNA polymerase II... 60 2e-07
A1DGF6_NEOFI (tr|A1DGF6) DNA directed RNA polymerase II 15 kDa s... 60 3e-07
E9BK52_LEIDB (tr|E9BK52) DNA-direcetd RNA polymerase II, subunit... 60 3e-07
A4I385_LEIIN (tr|A4I385) Putative DNA-direcetd RNA polymerase II... 60 3e-07
I3ZWH8_9EURY (tr|I3ZWH8) DNA-directed RNA polymerase subunit OS=... 60 3e-07
A4HG54_LEIBR (tr|A4HG54) Putative DNA-direcetd RNA polymerase II... 60 3e-07
M4BSI6_HYAAE (tr|M4BSI6) Uncharacterized protein OS=Hyaloperonos... 60 4e-07
B6YVY9_THEON (tr|B6YVY9) DNA-directed RNA polymerase subunit OS=... 60 4e-07
A1CSR4_ASPCL (tr|A1CSR4) DNA directed RNA polymerase II 15 kDa s... 59 4e-07
K3ZDC1_SETIT (tr|K3ZDC1) Uncharacterized protein OS=Setaria ital... 59 4e-07
M3B655_9PEZI (tr|M3B655) Uncharacterized protein OS=Pseudocercos... 59 7e-07
B8BIJ1_ORYSI (tr|B8BIJ1) Putative uncharacterized protein OS=Ory... 59 8e-07
E3S6X5_PYRTT (tr|E3S6X5) Putative uncharacterized protein OS=Pyr... 59 8e-07
Q4TTY9_9EURY (tr|Q4TTY9) DNA-directed RNA polymerase subunit OS=... 59 8e-07
G0HKD3_THES4 (tr|G0HKD3) DNA-directed RNA polymerase subunit OS=... 59 8e-07
E5A1N1_LEPMJ (tr|E5A1N1) Similar to DNA-directed RNA polymerase ... 58 1e-06
I1C4Z4_RHIO9 (tr|I1C4Z4) Uncharacterized protein OS=Rhizopus del... 58 1e-06
C1LEQ0_SCHJA (tr|C1LEQ0) RNA polymerase II 15kD subunit OS=Schis... 58 1e-06
H3B418_LATCH (tr|H3B418) DNA-directed RNA polymerase subunit OS=... 58 1e-06
M7ZGS2_TRIUA (tr|M7ZGS2) Uncharacterized protein OS=Triticum ura... 57 2e-06
G0EET8_PYRF1 (tr|G0EET8) DNA-directed RNA polymerase subunit OS=... 57 2e-06
H6Q6Y8_PYROT (tr|H6Q6Y8) DNA-directed RNA polymerase subunit OS=... 57 2e-06
A4WLS3_PYRAR (tr|A4WLS3) DNA-directed RNA polymerase subunit OS=... 57 2e-06
E6N523_9ARCH (tr|E6N523) DNA-directed RNA polymerase subunit OS=... 57 3e-06
L7IRH1_MAGOR (tr|L7IRH1) Uncharacterized protein OS=Magnaporthe ... 57 3e-06
L7HNY5_MAGOR (tr|L7HNY5) Uncharacterized protein OS=Magnaporthe ... 57 3e-06
D0N1Q1_PHYIT (tr|D0N1Q1) Putative uncharacterized protein OS=Phy... 57 3e-06
Q5JF34_PYRKO (tr|Q5JF34) DNA-directed RNA polymerase subunit OS=... 57 3e-06
G1X448_ARTOA (tr|G1X448) Uncharacterized protein OS=Arthrobotrys... 56 4e-06
A0DZF5_PARTE (tr|A0DZF5) Chromosome undetermined scaffold_70, wh... 56 5e-06
K2G7P7_ENTNP (tr|K2G7P7) DNA-directed RNA polymerase subunit OS=... 55 6e-06
B7R0T6_9EURY (tr|B7R0T6) DNA-directed RNA polymerase subunit OS=... 55 7e-06
N9V9I9_ENTHI (tr|N9V9I9) RNA polymerase III subunit, putative OS... 55 7e-06
M7VYE8_ENTHI (tr|M7VYE8) RNA polymerase III subunit OS=Entamoeba... 55 7e-06
M3S2V1_ENTHI (tr|M3S2V1) DNA-directed RNA polymerase subunit OS=... 55 7e-06
M2R9L4_ENTHI (tr|M2R9L4) DNA-directed RNA polymerase subunit OS=... 55 7e-06
C4M8P1_ENTHI (tr|C4M8P1) DNA-directed RNA polymerase subunit OS=... 55 7e-06
Q9YEZ3_AERPE (tr|Q9YEZ3) DNA-directed RNA polymerase subunit OS=... 55 7e-06
K7TTU3_MAIZE (tr|K7TTU3) Uncharacterized protein OS=Zea mays GN=... 55 8e-06
J3PGW4_GAGT3 (tr|J3PGW4) Uncharacterized protein OS=Gaeumannomyc... 55 9e-06
C5A5N8_THEGJ (tr|C5A5N8) DNA-directed RNA polymerase subunit OS=... 55 9e-06
>A5AGZ7_VITVI (tr|A5AGZ7) DNA-directed RNA polymerase subunit OS=Vitis vinifera
GN=VIT_05s0077g01170 PE=3 SV=1
Length = 114
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/114 (76%), Positives = 98/114 (85%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE+A++N VYRN+I SVG Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTKSVRC+QCNHGEAVFFQ T RGEEG TL FVCCNP CG+RWRD
Sbjct: 61 DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>C6SXF5_SOYBN (tr|C6SXF5) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=1
Length = 114
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/114 (77%), Positives = 97/114 (85%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QKVL +ACR+C+HQE+AD+ VYRN+I SVG Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTKSVRCSQCNHGEAVFFQ T RGEEG TL FVCCNP CGHRWRD
Sbjct: 61 DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>M5XGV0_PRUPE (tr|M5XGV0) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa013594mg PE=4 SV=1
Length = 114
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 98/114 (85%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE+AD+N VYRN+I +VG Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQILQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTK+VRCS+C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWRD
Sbjct: 61 DVAADPTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 114
>I1KMS4_SOYBN (tr|I1KMS4) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=1
Length = 114
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 98/114 (85%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MSSMKFCRRCNN+LYP ED E+K+L YACR+CNH+EIAD N+VYRN+I SV R + +
Sbjct: 1 MSSMKFCRRCNNVLYPTEDKEEKLLLYACRNCNHEEIADSNVVYRNKIHHSVQRRTRELE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
NVAADPTLPRTKSVRCSQCNHGEAVFF+ +GEEG L+FVCCNPTCG+RWRD
Sbjct: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFKAPVKGEEGMALIFVCCNPTCGYRWRD 114
>I1MGG3_SOYBN (tr|I1MGG3) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=1
Length = 114
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/114 (76%), Positives = 97/114 (85%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQKVL +ACR+C+HQE+AD+ VYRN+I+ VG Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTKSVRC+QCNHGEAVFFQ T RGEEG TL FVCCNP CGHRWRD
Sbjct: 61 DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>M1CLI8_SOLTU (tr|M1CLI8) DNA-directed RNA polymerase subunit OS=Solanum
tuberosum GN=PGSC0003DMG400027213 PE=3 SV=1
Length = 114
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/114 (75%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE A++N VYRN+I S Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTKSVRCSQC HGEAVFFQ T RGEEG TL FVCCNP CGHRWRD
Sbjct: 61 DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>K4C223_SOLLC (tr|K4C223) DNA-directed RNA polymerase subunit OS=Solanum
lycopersicum GN=Solyc05g053430.2 PE=3 SV=1
Length = 114
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/114 (75%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE A++N VYRN+I S Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTKSVRCSQC HGEAVFFQ T RGEEG TL FVCCNP CGHRWRD
Sbjct: 61 DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>Q2HU21_MEDTR (tr|Q2HU21) DNA-directed RNA polymerase subunit OS=Medicago
truncatula GN=MTR_2g034520 PE=3 SV=1
Length = 114
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/114 (75%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE AD+ VYRN+I SV Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTK+VRC QCNHGEAVFFQ T RGEEG TL FVCCNP CGHRWRD
Sbjct: 61 DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>M0REP7_MUSAM (tr|M0REP7) DNA-directed RNA polymerase subunit OS=Musa acuminata
subsp. malaccensis PE=3 SV=1
Length = 114
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 97/114 (85%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE+AD+N VYRN+I SVG Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTKSVRC+ C H EAVFFQ T+RGEEG TL FVCCNP+CG+RWRD
Sbjct: 61 DVAADPTLPRTKSVRCAVCGHPEAVFFQATSRGEEGMTLFFVCCNPSCGYRWRD 114
>D8RZ30_SELML (tr|D8RZ30) DNA-directed RNA polymerase subunit OS=Selaginella
moellendorffii GN=SELMODRAFT_125489 PE=3 SV=1
Length = 115
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 96/114 (84%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE+AD+N VYRN++ S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTKSVRC +C HGEAVFFQ TTRGEEG TL FVCCNP CG+RWRD
Sbjct: 61 DVASDPTLPRTKSVRCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGYRWRD 114
>B6TRW3_MAIZE (tr|B6TRW3) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 114
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQKVL YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTKSVRCS C HGEAVFFQ T RGEEG TL FVCCNP+CG+RWR+
Sbjct: 61 DVAGDPTLPRTKSVRCSSCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>J3NE50_ORYBR (tr|J3NE50) DNA-directed RNA polymerase subunit OS=Oryza
brachyantha GN=OB12G22580 PE=3 SV=1
Length = 114
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/114 (71%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTKSVRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAGDPTLPRTKSVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>C5YPS4_SORBI (tr|C5YPS4) DNA-directed RNA polymerase subunit OS=Sorghum bicolor
GN=Sb08g018130 PE=3 SV=1
Length = 114
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQKVL YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTKSVRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CG+RWR+
Sbjct: 61 DVAGDPTLPRTKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>Q2QNM4_ORYSJ (tr|Q2QNM4) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=LOC_Os12g37370 PE=2 SV=1
Length = 114
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>I1R770_ORYGL (tr|I1R770) DNA-directed RNA polymerase subunit OS=Oryza glaberrima
PE=3 SV=1
Length = 114
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>A2ZLM4_ORYSI (tr|A2ZLM4) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. indica GN=OsI_38722 PE=2 SV=1
Length = 114
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>B9HIQ4_POPTR (tr|B9HIQ4) DNA-directed RNA polymerase subunit OS=Populus
trichocarpa GN=POPTRDRAFT_820572 PE=3 SV=1
Length = 114
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/114 (71%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYP+ED +QK+L YACR+C+HQEIADDN VYRN++ SV Q Q
Sbjct: 1 MSTMKFCRECNNILYPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTK+V C+ C H EAVFFQ T+RGEEG TL FVCCNP CGHRWRD
Sbjct: 61 DVAADPTLPRTKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114
>M4FHJ2_BRARP (tr|M4FHJ2) DNA-directed RNA polymerase subunit OS=Brassica rapa
subsp. pekinensis GN=Bra040570 PE=3 SV=1
Length = 114
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQ +L YACR+C+HQE ADDN VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQSILLYACRNCDHQEAADDNCVYRNEVHHSVSEQTQILS 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C HGEAVFFQ T RGEEG TL FVCCNP CGHRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>I1IHJ8_BRADI (tr|I1IHJ8) DNA-directed RNA polymerase subunit OS=Brachypodium
distachyon GN=BRADI4G04820 PE=3 SV=1
Length = 114
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QKVL +ACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTK VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>F2E4K0_HORVD (tr|F2E4K0) DNA-directed RNA polymerase subunit OS=Hordeum vulgare
var. distichum PE=3 SV=1
Length = 114
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QKVL +ACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTK VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>M4EXL3_BRARP (tr|M4EXL3) DNA-directed RNA polymerase subunit OS=Brassica rapa
subsp. pekinensis GN=Bra033550 PE=3 SV=1
Length = 114
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQ +L YACR+C+HQE AD+N VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C HGEAVFFQ T RGEEG TL FVCCNP CGHRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>M0TF02_MUSAM (tr|M0TF02) DNA-directed RNA polymerase subunit OS=Musa acuminata
subsp. malaccensis PE=3 SV=1
Length = 114
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 96/114 (84%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQKVL YACR+C+HQE+AD+N VYRN + SV Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSVVEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRT++V+C+ CNH EAVFFQ TTRGEEG TL FVCCNP+CG+RWRD
Sbjct: 61 DVAADPTLPRTRAVQCAVCNHPEAVFFQATTRGEEGMTLFFVCCNPSCGYRWRD 114
>D7L697_ARALL (tr|D7L697) DNA-directed RNA polymerase subunit OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_318462 PE=3 SV=1
Length = 114
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE+AD++ VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C H EAVFFQ T RGEEG TL FVCCNP CGHRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHSEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>Q6NLH0_ARATH (tr|Q6NLH0) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=NRPB9A PE=3 SV=1
Length = 114
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE+AD++ VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRCS+C H EAVFFQ T RGEEG TL FVCCNP CGHRWR+
Sbjct: 61 DVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>R0F742_9BRAS (tr|R0F742) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10006057mg PE=4 SV=1
Length = 114
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 92/114 (80%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQ +L YACR+C+HQE AD+N VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C HGEAVFFQ T RGEEG TL FVCCNP C HRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114
>Q8L5V0_ARATH (tr|Q8L5V0) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=NRPB9B PE=3 SV=1
Length = 114
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 92/114 (80%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQ +L YACR+C+HQE AD+N VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C HGEAVFFQ T RGEEG TL FVCCNP C HRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114
>D7M9X1_ARALL (tr|D7M9X1) DNA-directed RNA polymerase subunit OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_493259 PE=3 SV=1
Length = 114
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 92/114 (80%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQ +L YACR+C+HQE AD+N VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C HGEAVFFQ T RGEEG TL FVCCNP C HRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114
>D8QRR8_SELML (tr|D8QRR8) DNA-directed RNA polymerase subunit OS=Selaginella
moellendorffii GN=SELMODRAFT_77443 PE=3 SV=1
Length = 114
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QK+L YACR+C+HQE AD+N VYRN++ + Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKLLLYACRNCDHQEAADNNCVYRNEVHHTADERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK VRCS+C HGEAVFFQ T RGEEG TL FVCCNP CG+RWRD
Sbjct: 61 DVASDPTLPRTKDVRCSRCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>R0I7I6_9BRAS (tr|R0I7I6) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10015697mg PE=4 SV=1
Length = 114
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQK+L YACR+C+HQE+AD++ VYRN++ SV Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC++C H EAVFFQ T RGEEG TL FVCCNP CGHRWR+
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>A9TUT9_PHYPA (tr|A9TUT9) DNA-directed RNA polymerase subunit OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_172071 PE=3 SV=1
Length = 114
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYP+ED ++KVL YACR+C+HQE+AD+N VYRN++ S Q Q
Sbjct: 1 MSTMKFCRECNNILYPREDRDKKVLLYACRNCDHQEVADNNCVYRNEVLHSADERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
++A+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCCNP CG+RWRD
Sbjct: 61 DIASDPTLPRTKNVRCANCQHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>K3ZAV9_SETIT (tr|K3ZAV9) DNA-directed RNA polymerase subunit OS=Setaria italica
GN=Si023680m.g PE=3 SV=1
Length = 114
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 92/114 (80%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED EQKVL YACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA DPTLPRTK VRC+ C HGEAVFFQ T RGEEG TL FVCCN +CG+RWR+
Sbjct: 61 DVAGDPTLPRTKDVRCAVCGHGEAVFFQATVRGEEGMTLFFVCCNLSCGNRWRE 114
>K4AJE7_SETIT (tr|K4AJE7) DNA-directed RNA polymerase subunit OS=Setaria italica
GN=Si039014m.g PE=3 SV=1
Length = 115
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAE- 59
MS+MKFCR CNNILYPKED E KVL YACR+C+HQE++D N VYRN + + G Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRENKVLLYACRNCDHQEVSDSNCVYRNVVDHAAGEFTQVLF 60
Query: 60 QNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
++VA+DPTLPRTKSVRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWRD
Sbjct: 61 EDVASDPTLPRTKSVRCAACGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 115
>M0RW66_MUSAM (tr|M0RW66) DNA-directed RNA polymerase subunit OS=Musa acuminata
subsp. malaccensis PE=3 SV=1
Length = 115
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED E+KVL +ACR+C HQE+AD + VYRN++ + Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDKERKVLLFACRNCYHQEVADYSCVYRNEVHHTASERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADPTLPRTK+V+CS+CNH EA FFQ +RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 DVAADPTLPRTKAVKCSKCNHPEAAFFQAASRGEEGMTLFFVCCNPSCGHRWRE 114
>N1QSI6_AEGTA (tr|N1QSI6) DNA-directed RNA polymerase II subunit RPB9 OS=Aegilops
tauschii GN=F775_30867 PE=4 SV=1
Length = 114
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 91/114 (79%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKE+ E+KVL +ACR+C HQE+A DN VYRN + G Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEEKERKVLLFACRNCEHQEVAGDNCVYRNIVHHEAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CG+RWR+
Sbjct: 61 DVASDPTLPRTKDVRCAACGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>K3YAZ3_SETIT (tr|K3YAZ3) DNA-directed RNA polymerase subunit OS=Setaria italica
GN=Si011385m.g PE=3 SV=1
Length = 114
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +++ L++ACR+C HQE++D N VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDKRTLFFACRNCEHQEVSDYNCVYRNEVHHTAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCC+P CGHRWR+
Sbjct: 61 DVASDPTLPRTKTVRCALCGHGEAVFFQATARGEEGMTLFFVCCSPDCGHRWRE 114
>C5YC89_SORBI (tr|C5YC89) DNA-directed RNA polymerase subunit OS=Sorghum bicolor
GN=Sb06g001670 PE=3 SV=1
Length = 114
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +++ LY+ACR+C HQE++D+N VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDRRTLYFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCC+P CG+RWR+
Sbjct: 61 DVASDPTLPRTKTVRCNACGHGEAVFFQATARGEEGMTLFFVCCSPDCGNRWRE 114
>B6T3H5_MAIZE (tr|B6T3H5) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 114
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 93/114 (81%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +++ L++ACR+C HQE++D+N VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEDRDRRTLFFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC+ C HGEAVFFQ RGEEG TL FVCC+P CGHRWR+
Sbjct: 61 DVASDPTLPRTKTVRCNLCGHGEAVFFQAAARGEEGMTLFFVCCSPDCGHRWRE 114
>C5YZB6_SORBI (tr|C5YZB6) DNA-directed RNA polymerase subunit OS=Sorghum bicolor
GN=Sb09g022760 PE=3 SV=1
Length = 114
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKE+ +++ L++ACR+C HQE++D+N VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEERDRRTLFFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRCS C HGEAVFFQ T RGEEG TL FVCC+P CG+RWR+
Sbjct: 61 DVASDPTLPRTKTVRCSACGHGEAVFFQATARGEEGMTLFFVCCSPDCGNRWRE 114
>Q10T38_ORYSJ (tr|Q10T38) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=Os03g0102200 PE=3 SV=1
Length = 114
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 91/114 (79%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKE+ ++++L +ACR+C HQE+++ VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEEKDRRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCCN TC HRWR+
Sbjct: 61 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTCAHRWRE 114
>B8AL10_ORYSI (tr|B8AL10) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. indica GN=OsI_09622 PE=2 SV=1
Length = 114
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 91/114 (79%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKE+ ++++L +ACR+C HQE+++ VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEEKDRRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG TL FVCCN TC HRWR+
Sbjct: 61 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTCAHRWRE 114
>J3LJ01_ORYBR (tr|J3LJ01) DNA-directed RNA polymerase subunit OS=Oryza
brachyantha GN=OB03G10270 PE=3 SV=1
Length = 114
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 91/114 (79%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKE+ E+++L +ACR+C HQE+++ VYRN++ + G Q Q
Sbjct: 1 MSTMKFCRECNNILYPKEEKERRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTK+VRCS C HGEAVFFQ T RGEEG TL FVCCN +C +RWR+
Sbjct: 61 DVASDPTLPRTKTVRCSACGHGEAVFFQATARGEEGMTLFFVCCNVSCAYRWRE 114
>I1HAW3_BRADI (tr|I1HAW3) DNA-directed RNA polymerase subunit OS=Brachypodium
distachyon GN=BRADI1G78510 PE=3 SV=1
Length = 114
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 92/114 (80%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKE+ +++VL +ACR+C HQE++D+ VYRN++ + Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEEKDRRVLLFACRNCEHQEVSDNTCVYRNEVHHAATERTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRTKSVRC+ C HGEAV+FQ T RGEEG TL +VCCN +CG+RWR+
Sbjct: 61 DVASDPTLPRTKSVRCTACGHGEAVYFQATARGEEGMTLFYVCCNLSCGNRWRE 114
>M0SRL6_MUSAM (tr|M0SRL6) DNA-directed RNA polymerase subunit OS=Musa acuminata
subsp. malaccensis PE=3 SV=1
Length = 114
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 88/114 (77%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS MKFC CNN+LYPKED EQ++L +ACR+C+HQE+ADD + YR +I SVG Q Q
Sbjct: 1 MSVMKFCGECNNVLYPKEDREQRILLFACRNCDHQEVADDCVAYRMEINHSVGERSQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADP LPRT++VRC+ C+H EAVFFQ ++ E G L F+CCNP CGHRWRD
Sbjct: 61 DVAADPALPRTRNVRCANCHHPEAVFFQAPSKAEVGMALFFICCNPNCGHRWRD 114
>Q0IMM9_ORYSJ (tr|Q0IMM9) DNA-directed RNA polymerase subunit (Fragment) OS=Oryza
sativa subsp. japonica GN=Os12g0560400 PE=2 SV=1
Length = 104
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 85/104 (81%)
Query: 11 NNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPR 70
NNILYPKED +QK+L YACR+C+HQE+AD+N VYRN + S G Q Q+VA DPTLPR
Sbjct: 1 NNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR 60
Query: 71 TKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
TK+VRC+ C HGEAVFFQ T RGEEG TL FVCCNP+CGHRWR+
Sbjct: 61 TKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 104
>B9RZN6_RICCO (tr|B9RZN6) DNA-directed RNA polymerase subunit OS=Ricinus communis
GN=RCOM_1000040 PE=3 SV=1
Length = 266
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 81/104 (77%)
Query: 11 NNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPR 70
NNILYPKED +QK+L YACR+C+HQEIA+ N VYRN++ S Q Q+VAADPTLPR
Sbjct: 163 NNILYPKEDRDQKILLYACRNCDHQEIAESNCVYRNEVHHSAAERTQVLQDVAADPTLPR 222
Query: 71 TKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
TK+V C C H EAVFFQ T RGEEG TL FVCCNP CGHRWRD
Sbjct: 223 TKAVECQVCKHPEAVFFQATARGEEGMTLFFVCCNPICGHRWRD 266
Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 69/88 (78%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS KFC CNN+LYPKED +Q++L YACR+C HQE+AD N VYRN+I SV + Q Q
Sbjct: 1 MSVYKFCPDCNNVLYPKEDRKQRILLYACRNCEHQEVADSNRVYRNEIHHSVSEHTQILQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQ 88
+VA+DPTLPRTKSVRCS C HGEAVF Q
Sbjct: 61 DVASDPTLPRTKSVRCSACGHGEAVFLQ 88
>K3ZY78_SETIT (tr|K3ZY78) DNA-directed RNA polymerase subunit OS=Setaria italica
GN=Si031560m.g PE=3 SV=1
Length = 114
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 85/114 (74%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFCR CNN+LYP+ED E + L YAC+ C HQE+A D VY+ +R+ G +
Sbjct: 1 MSALKFCRECNNMLYPREDKETRTLLYACQSCEHQEVASDTCVYKRVLRKPSGEPKDVLK 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VAADP+LPRT+SVRC CNH EA FFQ T+GE+ TL F+CCNP+CGHRWRD
Sbjct: 61 DVAADPSLPRTRSVRCYNCNHPEAAFFQAPTKGEKAMTLYFICCNPSCGHRWRD 114
>Q10T39_ORYSJ (tr|Q10T39) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=LOC_Os03g01230 PE=2 SV=1
Length = 136
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 22/136 (16%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQ----------------------EIA 38
MS+MKFCR CNNILYPKE+ ++++L +ACR+C HQ E++
Sbjct: 1 MSTMKFCRECNNILYPKEEKDRRLLLFACRNCEHQVHTLIISIRLWRRRNLKKQQQQEVS 60
Query: 39 DDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTT 98
+ VYRN++ + G Q Q+VA+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG T
Sbjct: 61 ESKCVYRNEVAHAAGERTQVLQDVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMT 120
Query: 99 LVFVCCNPTCGHRWRD 114
L FVCCN TC HRWR+
Sbjct: 121 LFFVCCNLTCAHRWRE 136
>I1P6L3_ORYGL (tr|I1P6L3) DNA-directed RNA polymerase subunit OS=Oryza glaberrima
PE=3 SV=1
Length = 136
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 22/136 (16%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQ----------------------EIA 38
MS+MKFCR CNNILYPKE+ ++++L +ACR+C HQ E++
Sbjct: 1 MSTMKFCRECNNILYPKEEKDRRLLLFACRNCEHQVHTLIISIRLWRRRNLKKQQQQEVS 60
Query: 39 DDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTT 98
+ VYRN++ + G Q Q+VA+DPTLPRTK+VRC+ C HGEAVFFQ T RGEEG T
Sbjct: 61 ESKCVYRNEVAHAAGERTQVLQDVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMT 120
Query: 99 LVFVCCNPTCGHRWRD 114
L FVCCN TC HRWR+
Sbjct: 121 LFFVCCNLTCAHRWRE 136
>C5Y7V5_SORBI (tr|C5Y7V5) Putative uncharacterized protein Sb05g026420 OS=Sorghum
bicolor GN=Sb05g026420 PE=4 SV=1
Length = 109
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Query: 11 NNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQA-EQNVAADPTLP 69
NNILYPKED KVL YACR+C HQE+AD N VYRN + G Q ++VA+DPTLP
Sbjct: 5 NNILYPKEDRANKVLLYACRNCEHQEVADSNCVYRNVVDHDAGELTQVLSEDVASDPTLP 64
Query: 70 RTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
RTKSVRC+ C HGEAVFFQ TTRGE+G L FVCCNP+CGHRWRD
Sbjct: 65 RTKSVRCAACGHGEAVFFQATTRGEDGMALFFVCCNPSCGHRWRD 109
>J3MMZ0_ORYBR (tr|J3MMZ0) DNA-directed RNA polymerase subunit OS=Oryza
brachyantha GN=OB07G27720 PE=3 SV=1
Length = 114
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 82/114 (71%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFC CNN+LYP+ED E + L YAC C HQE+A D VY+ IR+S G +
Sbjct: 1 MSALKFCGECNNMLYPREDKETRTLLYACNSCEHQELATDTCVYKRVIRKSAGVPKDILK 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A+DPTLPRT+S+RC C H EA FFQ T+GE G TL F+CCNP+CGHRWRD
Sbjct: 61 DAASDPTLPRTRSIRCYNCGHPEAAFFQAPTKGERGLTLYFICCNPSCGHRWRD 114
>B6UEU6_MAIZE (tr|B6UEU6) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 114
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 83/114 (72%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFCR CNN+LYP+ED E + L YAC+ C H+EIA D VY+ IR+ G +
Sbjct: 1 MSTLKFCRECNNMLYPREDKETRTLLYACQTCEHEEIATDTCVYKRVIRKPGGEPKDVLK 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A DP+LPRT+SVRC CNH EA FFQ T+GE+ TL F+CCNP+CGHRWRD
Sbjct: 61 DAATDPSLPRTRSVRCYNCNHPEAAFFQAPTKGEQAMTLYFICCNPSCGHRWRD 114
>B6U7D6_MAIZE (tr|B6U7D6) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 114
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 82/114 (71%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFCR CNN+LYP+ED E + L YAC+ C H+EIA D VY+ IR+ G +
Sbjct: 1 MSTLKFCRECNNMLYPREDKETRTLLYACQTCEHEEIATDTCVYKRVIRKPGGEPKDVLK 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A DP+LPRT+SVRC CNH EA FFQ T+GE+ TL F+CCNP CGHRWRD
Sbjct: 61 DAATDPSLPRTRSVRCYNCNHPEAAFFQAPTKGEQAMTLYFICCNPICGHRWRD 114
>B9HWY2_POPTR (tr|B9HWY2) DNA-directed RNA polymerase subunit OS=Populus
trichocarpa GN=POPTRDRAFT_805257 PE=3 SV=1
Length = 113
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M KFC +CNNILYPKED QK+L YACR C+HQE+A +N VYRN+I Q Q
Sbjct: 1 MDVYKFCPQCNNILYPKEDKMQKILLYACRSCDHQEVAGNNRVYRNEIYHHAAEYTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DP LPRTKSV C+ C +GEAVF Q T G+EG T+ +VCCNP CGHRWRD
Sbjct: 61 DVASDPALPRTKSVCCAVCGYGEAVFLQATA-GDEGMTMFYVCCNPNCGHRWRD 113
>F2DTN6_HORVD (tr|F2DTN6) DNA-directed RNA polymerase subunit (Fragment)
OS=Hordeum vulgare var. distichum PE=2 SV=1
Length = 143
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 82/114 (71%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFC +C+N+LYP+ED VL YAC +C HQEIA D VY+ +R+S +
Sbjct: 30 MSALKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLK 89
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ AADP+LPRTKSV+C C + EA +FQ T+GE G TL F+CC+PTCGHRWRD
Sbjct: 90 DAAADPSLPRTKSVKCYNCGYPEAAYFQAPTKGERGLTLYFICCSPTCGHRWRD 143
>Q8GSD5_ORYSJ (tr|Q8GSD5) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=P0616D06.132 PE=3 SV=1
Length = 116
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 79/114 (69%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFC C+N+LYP+ED E L YAC C HQE A D VY+ +R+ G +
Sbjct: 3 MSALKFCGECSNMLYPREDKETHTLLYACNSCEHQEPATDTCVYKRVLRKPAGEPKDILK 62
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A DPTLPRT+S++C C H EA FFQ T+GE+G TL F+CCNP+CGHRWRD
Sbjct: 63 DAATDPTLPRTRSIKCYNCGHPEAAFFQAPTKGEKGLTLYFICCNPSCGHRWRD 116
>I1QC61_ORYGL (tr|I1QC61) DNA-directed RNA polymerase subunit OS=Oryza glaberrima
PE=3 SV=1
Length = 116
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 79/114 (69%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFC C+N+LYP+ED E L YAC C HQE A D VY+ +R+ G +
Sbjct: 3 MSALKFCGECSNMLYPREDKETHTLLYACNSCEHQEPATDTCVYKRVLRKPAGEPKDILK 62
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A DPTLPRT+S++C C H EA FFQ T+GE+G TL F+CCNP+CGHRWRD
Sbjct: 63 DAATDPTLPRTRSIKCYNCGHPEAAFFQAPTKGEKGLTLYFICCNPSCGHRWRD 116
>B6U3L3_MAIZE (tr|B6U3L3) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 118
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 82/118 (69%), Gaps = 4/118 (3%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFCR CNN+LYP+ED E + L YAC+ C H+EIA D VY+ IR+ G +
Sbjct: 1 MSTLKFCRECNNMLYPREDKETRTLLYACQTCEHEEIATDTCVYKRVIRKPGGEPKDVLK 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQT----TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A DP+LPRT+SVRC C H EA FFQ T+GE+ TL F+CCNP+CGHRWRD
Sbjct: 61 DAATDPSLPRTRSVRCYNCXHPEAAFFQVCTQAPTKGEQAMTLYFICCNPSCGHRWRD 118
>Q0D4N8_ORYSJ (tr|Q0D4N8) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=Os07g0615800 PE=3 SV=1
Length = 117
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 75/110 (68%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFC C+N+LYP+ED E L YAC C HQE A D VY+ +R+ G +
Sbjct: 3 MSALKFCGECSNMLYPREDKETHTLLYACNSCEHQEPATDTCVYKRVLRKPAGEPKDILK 62
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGH 110
+ A DPTLPRT+S++C C H EA FFQ T+GE+G TL F+CCNP+CGH
Sbjct: 63 DAATDPTLPRTRSIKCYNCGHPEAAFFQAPTKGEKGLTLYFICCNPSCGH 112
>N1QRZ5_AEGTA (tr|N1QRZ5) DNA-directed RNA polymerase II subunit RPB9
OS=Aegilops tauschii GN=F775_28928 PE=4 SV=1
Length = 90
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 71/89 (79%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QKVL +ACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQT 89
+VA DPTLPRTK VRC+ C HGEAVFFQ
Sbjct: 61 DVAGDPTLPRTKEVRCAVCGHGEAVFFQM 89
>M7ZSI9_TRIUA (tr|M7ZSI9) DNA-directed RNA polymerase II subunit RPB9
OS=Triticum urartu GN=TRIUR3_10000 PE=4 SV=1
Length = 90
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 71/89 (79%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+MKFCR CNNILYPKED +QKVL +ACR+C+HQE+AD+N VYRN + S G Q Q
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQT 89
+VA DPTLPRTK VRC+ C HGEAVFFQ
Sbjct: 61 DVAGDPTLPRTKEVRCAVCGHGEAVFFQM 89
>I1GS55_BRADI (tr|I1GS55) DNA-directed RNA polymerase subunit OS=Brachypodium
distachyon GN=BRADI1G20820 PE=3 SV=1
Length = 115
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS++KFCR CNN+LYP+ED E + L+Y C+ C HQE+A D VY+ +R+ +
Sbjct: 1 MSALKFCRHCNNMLYPREDKETRTLHYVCQSCEHQEVATDTCVYKRVLRKPADEPKDILK 60
Query: 61 NVAAD-PTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+ A D +LPRT+SV+C C + EA FFQ ++GE L F+CC+PTC HRWRD
Sbjct: 61 DAATDISSLPRTRSVKCYNCGYPEAAFFQAPSKGEADMVLYFICCSPTCSHRWRD 115
>C3XRA2_BRAFL (tr|C3XRA2) DNA-directed RNA polymerase subunit OS=Branchiostoma
floridae GN=BRAFLDRAFT_278052 PE=3 SV=1
Length = 125
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++Q++AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENKILLYACRNCDYQQVADNSCIYVNKIMHEVDELTQIVADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
A DPTLPRT+ +C +C H EAVFFQ+ TT+ E+ L +VC P CGHRW
Sbjct: 73 AQDPTLPRTEDHQCPKCGHREAVFFQSQTTKAEDAMRLYYVCTAPNCGHRW 123
>H2ZKE3_CIOSA (tr|H2ZKE3) DNA-directed RNA polymerase subunit (Fragment) OS=Ciona
savignyi GN=Csa.1691 PE=3 SV=1
Length = 126
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED + K+L Y+CR+C+ Q AD+ VY N+I V Q +V
Sbjct: 14 GIKFCQECNNMLYPKEDKQNKILLYSCRNCDFQMEADNLCVYVNKIVHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
A DPTLPRT+ C +C H EAVFFQ+ +TR EEG L FVC NP CGHRW
Sbjct: 74 AQDPTLPRTRDHSCPKCRHKEAVFFQSQSTRDEEGMRLYFVCTNPQCGHRW 124
>K7V0D4_MAIZE (tr|K7V0D4) Uncharacterized protein OS=Zea mays GN=ZEAMMB73_218313
PE=4 SV=1
Length = 1230
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Query: 24 VLYYACRHCNHQ-----EIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCSQ 78
+++Y+C E++D+N VYRN++ + G + Q+VA+DPTLPRTK+VRC+
Sbjct: 1135 IVFYSCLRLEKISELLCEVSDNNCVYRNEVHHTAGERTEVLQDVASDPTLPRTKTVRCNL 1194
Query: 79 CNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
C HGEAVFFQ TRGEEG TL FVCC+P CGHRWR+
Sbjct: 1195 CGHGEAVFFQAATRGEEGMTLFFVCCSPDCGHRWRE 1230
>K7VS28_MAIZE (tr|K7VS28) Uncharacterized protein OS=Zea mays GN=ZEAMMB73_218313
PE=4 SV=1
Length = 500
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Query: 24 VLYYACRHCNHQ-----EIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCSQ 78
+++Y+C E++D+N VYRN++ + G + Q+VA+DPTLPRTK+VRC+
Sbjct: 405 IVFYSCLRLEKISELLCEVSDNNCVYRNEVHHTAGERTEVLQDVASDPTLPRTKTVRCNL 464
Query: 79 CNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
C HGEAVFFQ TRGEEG TL FVCC+P CGHRWR+
Sbjct: 465 CGHGEAVFFQAATRGEEGMTLFFVCCSPDCGHRWRE 500
>F2E3D5_HORVD (tr|F2E3D5) Predicted protein (Fragment) OS=Hordeum vulgare var.
distichum PE=2 SV=1
Length = 85
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 62/80 (77%)
Query: 35 QEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGE 94
QE+AD+N VYRN + S G Q Q+VA DPTLPRTK VRC+ C HGEAVFFQ T RGE
Sbjct: 6 QEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGE 65
Query: 95 EGTTLVFVCCNPTCGHRWRD 114
EG TL FVCCNP+CGHRWR+
Sbjct: 66 EGMTLFFVCCNPSCGHRWRE 85
>K1QHM9_CRAGI (tr|K1QHM9) DNA-directed RNA polymerase subunit OS=Crassostrea
gigas GN=CGI_10004561 PE=3 SV=1
Length = 127
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED E K+L YACR+C++QE A + +Y N+I V Q +V
Sbjct: 15 GIKFCKECNNMLYPKEDKENKLLLYACRNCDYQEEATNPCIYVNKITHEVDELTQIIGDV 74
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
ADPTLPRT+ C +C H E+VFFQ+ +T+ EEG L +VC NP C HRW +
Sbjct: 75 IADPTLPRTEDHPCPKCAHKESVFFQSHSTKAEEGMRLYYVCTNPQCVHRWTE 127
>C4WT20_ACYPI (tr|C4WT20) DNA-directed RNA polymerase subunit OS=Acyrthosiphon
pisum GN=ACYPI001520 PE=2 SV=1
Length = 130
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
++FC+ CNN+LYPKED E KVL YACR+C+H+++AD N +Y N+I + +V
Sbjct: 16 IRFCQECNNMLYPKEDKEHKVLLYACRNCDHRQMADSNCIYVNKIMHEINELTHIVSDVT 75
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPR++ C +C H E+VFFQ T R EE L +VC NP C HRW
Sbjct: 76 SDPTLPRSEDHPCPKCKHRESVFFQAQTRRAEEEMRLYYVCTNPHCIHRW 125
>D2A4H0_TRICA (tr|D2A4H0) DNA-directed RNA polymerase subunit OS=Tribolium
castaneum GN=GLEAN_15369 PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD +Y N+I + +V
Sbjct: 18 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQHADSKCIYVNKIMHEIDELTHIVPDV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH EAVFFQ T R EE L +VC NP C HRW
Sbjct: 78 ISDPTLPRTEDHHCPECNHREAVFFQAQTRRAEEEMRLYYVCTNPMCAHRW 128
>H9L0B5_CHICK (tr|H9L0B5) DNA-directed RNA polymerase subunit OS=Gallus gallus
GN=POLR2I PE=3 SV=2
Length = 125
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E +VL YACR+C++Q+ AD + +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKESRVLLYACRNCDYQQEADSSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW +
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>G1N8X3_MELGA (tr|G1N8X3) DNA-directed RNA polymerase subunit OS=Meleagris
gallopavo GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E +VL YACR+C++Q+ AD + +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKESRVLLYACRNCDYQQEADSSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW +
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>B7PRG9_IXOSC (tr|B7PRG9) DNA-directed RNA polymerase subunit OS=Ixodes
scapularis GN=IscW_ISCW007621 PE=3 SV=1
Length = 129
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED E +VL YACR+C++Q++AD+N +Y N+I V Q +V
Sbjct: 17 GIKFCQECNNMLYPKEDKENRVLLYACRNCDYQQVADNNCIYVNKITHEVDELTQIVSDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
DPTLPRT+ C +C+H EAVFFQ + R E+ L +VC N C HRW
Sbjct: 77 VHDPTLPRTEDHTCPKCSHREAVFFQAQSRRAEDEMRLYYVCTNTNCTHRW 127
>L8Y4S9_TUPCH (tr|L8Y4S9) DNA-directed RNA polymerase subunit OS=Tupaia chinensis
GN=TREES_T100004837 PE=3 SV=1
Length = 125
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>B5FX75_TAEGU (tr|B5FX75) DNA-directed RNA polymerase subunit OS=Taeniopygia
guttata PE=2 SV=1
Length = 125
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>H2MDN2_ORYLA (tr|H2MDN2) DNA-directed RNA polymerase subunit OS=Oryzias latipes
GN=LOC101158787 PE=3 SV=1
Length = 126
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
A DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW
Sbjct: 74 AQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRW 124
>L8HW61_BOSMU (tr|L8HW61) DNA-directed RNA polymerase subunit (Fragment) OS=Bos
grunniens mutus GN=M91_17412 PE=3 SV=1
Length = 127
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 15 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 74
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 75 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 125
>R4FN54_RHOPR (tr|R4FN54) Putative rna polymerase ii subunit 9 OS=Rhodnius
prolixus PE=2 SV=1
Length = 129
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C+++++AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKVLLYACRNCDYKQLADSNCIYVNKIMHEIDELTHIVSDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEQHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCTHRW 127
>I3MDG9_SPETR (tr|I3MDG9) DNA-directed RNA polymerase subunit OS=Spermophilus
tridecemlineatus GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>H0VKN8_CAVPO (tr|H0VKN8) DNA-directed RNA polymerase subunit OS=Cavia porcellus
GN=LOC100727762 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>G5BK10_HETGA (tr|G5BK10) DNA-directed RNA polymerase subunit OS=Heterocephalus
glaber GN=GW7_08932 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>D4A531_RAT (tr|D4A531) DNA-directed RNA polymerase subunit OS=Rattus
norvegicus GN=Polr2i PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>M3Y2V4_MUSPF (tr|M3Y2V4) DNA-directed RNA polymerase subunit OS=Mustela putorius
furo GN=Polr2i PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>M3X8K0_FELCA (tr|M3X8K0) DNA-directed RNA polymerase subunit OS=Felis catus
GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>L5LT90_MYODS (tr|L5LT90) DNA-directed RNA polymerase subunit OS=Myotis davidii
GN=MDA_GLEAN10008256 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>L5L2W2_PTEAL (tr|L5L2W2) DNA-directed RNA polymerase subunit OS=Pteropus alecto
GN=PAL_GLEAN10001193 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>H2QG57_PANTR (tr|H2QG57) DNA-directed RNA polymerase subunit OS=Pan troglodytes
GN=POLR2I PE=2 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>H2NYJ8_PONAB (tr|H2NYJ8) DNA-directed RNA polymerase subunit OS=Pongo abelii
GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>H0XWT9_OTOGA (tr|H0XWT9) DNA-directed RNA polymerase subunit OS=Otolemur
garnettii GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>G7PXC1_MACFA (tr|G7PXC1) DNA-directed RNA polymerase subunit OS=Macaca
fascicularis GN=EGM_09625 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>G3TFB9_LOXAF (tr|G3TFB9) DNA-directed RNA polymerase subunit OS=Loxodonta
africana GN=LOC100658164 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>G1TAL1_RABIT (tr|G1TAL1) DNA-directed RNA polymerase subunit OS=Oryctolagus
cuniculus GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>G1RLW6_NOMLE (tr|G1RLW6) DNA-directed RNA polymerase subunit OS=Nomascus
leucogenys GN=LOC100587588 PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>G1PKA1_MYOLU (tr|G1PKA1) DNA-directed RNA polymerase subunit OS=Myotis lucifugus
PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>F7IC64_CALJA (tr|F7IC64) DNA-directed RNA polymerase subunit OS=Callithrix
jacchus GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>F7A420_MACMU (tr|F7A420) DNA-directed RNA polymerase subunit OS=Macaca mulatta
GN=POLR2I PE=2 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>F6ZTX6_HORSE (tr|F6ZTX6) DNA-directed RNA polymerase subunit OS=Equus caballus
GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>F6U7C7_MONDO (tr|F6U7C7) DNA-directed RNA polymerase subunit OS=Monodelphis
domestica GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>F1MZ35_BOVIN (tr|F1MZ35) DNA-directed RNA polymerase subunit OS=Bos taurus
GN=POLR2I PE=3 SV=2
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>E2QYJ4_CANFA (tr|E2QYJ4) DNA-directed RNA polymerase subunit OS=Canis familiaris
GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>D2HFU4_AILME (tr|D2HFU4) DNA-directed RNA polymerase subunit (Fragment)
OS=Ailuropoda melanoleuca GN=POLR2I PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 73 SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>M3ZFL0_XIPMA (tr|M3ZFL0) DNA-directed RNA polymerase subunit OS=Xiphophorus
maculatus GN=POLR2I PE=3 SV=1
Length = 126
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
A DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 AQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>Q1LVK2_DANRE (tr|Q1LVK2) DNA-directed RNA polymerase subunit OS=Danio rerio
GN=polr2i PE=3 SV=1
Length = 126
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
A DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW
Sbjct: 74 AQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRW 124
>H3AMM8_LATCH (tr|H3AMM8) DNA-directed RNA polymerase subunit OS=Latimeria
chalumnae PE=3 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW +
Sbjct: 73 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>E2B8V2_HARSA (tr|E2B8V2) DNA-directed RNA polymerase subunit OS=Harpegnathos
saltator GN=EAI_05476 PE=3 SV=1
Length = 130
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C+ +++AD N +Y N+I + +V
Sbjct: 18 GIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYVNKIMHEIDELTHIVADV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH EAVFFQ T R EE L +VC N C HRW
Sbjct: 78 ISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCSHRW 128
>Q5EAU6_XENLA (tr|Q5EAU6) DNA-directed RNA polymerase subunit OS=Xenopus laevis
GN=polr2i PE=2 SV=1
Length = 125
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I + Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEIDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
A +PTLPRT+ CS+C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 73 AQEPTLPRTEDHPCSKCGHKEAVFFQSHSAKSEDAMRLYYVCTAPHCGHRWTE 125
>H9IFB5_ATTCE (tr|H9IFB5) DNA-directed RNA polymerase subunit OS=Atta cephalotes
PE=3 SV=1
Length = 130
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C+ +++AD N +Y N+I + +V
Sbjct: 18 GIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYVNKIMHEIDELTHIVADV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH EAVFFQ T R EE L +VC N C HRW
Sbjct: 78 ISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCSHRW 128
>F4WJS5_ACREC (tr|F4WJS5) DNA-directed RNA polymerase subunit OS=Acromyrmex
echinatior GN=G5I_05957 PE=3 SV=1
Length = 130
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C+ +++AD N +Y N+I + +V
Sbjct: 18 GIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYVNKIMHEIDELTHIVADV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH EAVFFQ T R EE L +VC N C HRW
Sbjct: 78 ISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCSHRW 128
>G1TVU5_RABIT (tr|G1TVU5) DNA-directed RNA polymerase subunit OS=Oryctolagus
cuniculus GN=LOC100345985 PE=3 SV=1
Length = 125
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 13 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 72
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW +
Sbjct: 73 SQDPTLPRTEDHPCLKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>Q4S925_TETNG (tr|Q4S925) DNA-directed RNA polymerase subunit (Fragment)
OS=Tetraodon nigroviridis GN=POLR2I PE=3 SV=1
Length = 126
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>H2RKA8_TAKRU (tr|H2RKA8) DNA-directed RNA polymerase subunit OS=Takifugu
rubripes GN=LOC101071441 PE=3 SV=1
Length = 126
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>M4V062_SALSA (tr|M4V062) DNA-directed RNA polymerase II subunit I OS=Salmo salar
GN=rpb4 PE=2 SV=1
Length = 126
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>I3JD43_ORENI (tr|I3JD43) DNA-directed RNA polymerase subunit OS=Oreochromis
niloticus GN=LOC100711366 PE=3 SV=1
Length = 126
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRW 124
>C1BGM4_ONCMY (tr|C1BGM4) DNA-directed RNA polymerase subunit OS=Oncorhynchus
mykiss GN=RPB9 PE=2 SV=1
Length = 126
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>G3NU38_GASAC (tr|G3NU38) DNA-directed RNA polymerase subunit OS=Gasterosteus
aculeatus GN=POLR2I PE=3 SV=1
Length = 126
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>B0W4J8_CULQU (tr|B0W4J8) DNA-directed RNA polymerase subunit OS=Culex
quinquefasciatus GN=CpipJ_CPIJ001855 PE=3 SV=1
Length = 127
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C++++ AD N +Y N+I + +V
Sbjct: 15 GIRFCQECNNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 74
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C H EAVFFQ T R EE L +VC NP C HRW
Sbjct: 75 ISDPTLPRTEEHACPKCAHREAVFFQAQTRRAEEEMRLYYVCTNPNCCHRW 125
>Q1HRD6_AEDAE (tr|Q1HRD6) DNA-directed RNA polymerase subunit OS=Aedes aegypti
GN=AAEL001831 PE=2 SV=1
Length = 128
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C++++ AD N +Y N+I + +V
Sbjct: 16 GIRFCQECNNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 75
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C H EAVFFQ T R EE L +VC NP C HRW
Sbjct: 76 ISDPTLPRTEEHACPKCTHREAVFFQAQTRRAEEEMRLYYVCTNPGCCHRW 126
>H9KLW8_APIME (tr|H9KLW8) DNA-directed RNA polymerase subunit OS=Apis mellifera
GN=RpII15 PE=3 SV=1
Length = 130
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C+ +++AD N +Y N+I + +V
Sbjct: 18 GIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYVNKIMHEIDELTHIVADV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH EAVFFQ T R EE L +VC N C HRW
Sbjct: 78 ISDPTLPRTEDHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCCHRW 128
>J3JUM6_9CUCU (tr|J3JUM6) DNA-directed RNA polymerase subunit OS=Dendroctonus
ponderosae GN=YQE_11478 PE=2 SV=1
Length = 130
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C++++ AD +Y N+I + +V
Sbjct: 18 GIRFCQECNNMLYPKEDKENKVLMYACRNCDYKQHADSKCIYVNKIMHEIDELTHIVSDV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C C H EAVFFQ T R EE L +VC NP C HRW
Sbjct: 78 ISDPTLPRTEDHHCPVCQHREAVFFQAQTRRAEEEMRLYYVCTNPHCAHRW 128
>Q5XJ93_DANRE (tr|Q5XJ93) DNA-directed RNA polymerase subunit OS=Danio rerio
GN=polr2i PE=2 SV=1
Length = 126
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ ++ N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIHVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
A DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW +
Sbjct: 74 AQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>I1G153_AMPQE (tr|I1G153) DNA-directed RNA polymerase subunit OS=Amphimedon
queenslandica GN=LOC100637249 PE=3 SV=1
Length = 130
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E+KVL +ACR+C + + A D+ +Y N+I V Q +V
Sbjct: 18 GIQFCQECNNMLYPKEDKERKVLLHACRNCEYSQPAGDSCIYVNKITHEVDELTQIIADV 77
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRTK C +C+H +AVFFQ+ + + EE L +VCC+ CGHRW
Sbjct: 78 SQDPTLPRTKDHPCPKCDHRDAVFFQSQSKKAEEEMKLYYVCCSEGCGHRW 128
>G3MMZ4_9ACAR (tr|G3MMZ4) DNA-directed RNA polymerase subunit OS=Amblyomma
maculatum PE=2 SV=1
Length = 129
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED E +VL YACR+C++Q+ AD+N +Y N+I V Q +V
Sbjct: 17 GIKFCQECNNMLYPKEDKENRVLLYACRNCDYQQEADNNCIYVNKITHEVDELTQIVSDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
DPTLPRT+ C +C H EAVFFQ + R E+ L +VC N C HRW
Sbjct: 77 VHDPTLPRTEDHTCPKCGHREAVFFQAQSRRAEDEMRLYYVCTNTNCTHRW 127
>A7SXH3_NEMVE (tr|A7SXH3) DNA-directed RNA polymerase subunit OS=Nematostella
vectensis GN=v1g247948 PE=3 SV=1
Length = 129
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 74/109 (67%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+KFC+ CNN+LYPKED + K+L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 19 IKFCQECNNMLYPKEDKDHKILLYACRNCDYQQEADNSCIYVNKITHEVNELTQIVGDVI 78
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
ADPTLPRT+ C +C H E+VFFQ+ + + L +VC + CGH+W
Sbjct: 79 ADPTLPRTEDHECPRCGHRESVFFQSQSSKADQMVLYYVCTSVDCGHKW 127
>C1BH34_ONCMY (tr|C1BH34) DNA-directed RNA polymerase subunit OS=Oncorhynchus
mykiss GN=RPB9 PE=2 SV=1
Length = 126
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H +AVFFQ+ + + E+ L +VC P CGHRW
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKKAVFFQSHSMKAEDAMRLYYVCTAPHCGHRW 124
>K7IM61_NASVI (tr|K7IM61) DNA-directed RNA polymerase subunit OS=Nasonia
vitripennis PE=3 SV=1
Length = 131
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED E KVL YACR+C+ + +AD + +Y N+I + +V
Sbjct: 19 GIKFCQECNNMLYPKEDKENKVLMYACRNCDFKTLADSSCIYVNKIMHEIDELTHIVADV 78
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +CNH E+VFFQ T R EE L +VC N C HRW
Sbjct: 79 ISDPTLPRTEEHPCPKCNHRESVFFQAQTRRAEEEMRLYYVCTNAHCTHRW 129
>R7TJF0_9ANNE (tr|R7TJF0) Uncharacterized protein OS=Capitella teleta
GN=CAPTEDRAFT_195976 PE=4 SV=1
Length = 131
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED + +VL YACR+C +++ AD+ +Y N+I+ V Q +V
Sbjct: 19 GIKFCQECNNMLYPKEDKDSRVLLYACRNCEYKQEADNPCIYVNKIQHEVDELTQIIADV 78
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
ADPTLPRT C QC H EAVFFQ+ + R EEG L +VC C HRW
Sbjct: 79 VADPTLPRTGDHPCPQCGHKEAVFFQSQSRRAEEGMRLYYVCSLANCMHRW 129
>Q7Q4H0_ANOGA (tr|Q7Q4H0) DNA-directed RNA polymerase subunit (Fragment)
OS=Anopheles gambiae GN=AGAP008393 PE=3 SV=2
Length = 128
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 16 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 75
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N +C HRW
Sbjct: 76 ISDPTLPRTEEHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNSSCCHRW 126
>L7M473_9ACAR (tr|L7M473) DNA-directed RNA polymerase subunit OS=Rhipicephalus
pulchellus PE=2 SV=1
Length = 129
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC+ CNN+LYPKED E +VL YACR+C++Q+ AD+N +Y N+I V Q +V
Sbjct: 17 GIKFCQECNNMLYPKEDKENRVLLYACRNCDYQQEADNNCIYVNKITHEVDELTQIVSDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
DPTLPRT+ C +C H EAVFFQ + R E+ L +VC N C HRW
Sbjct: 77 VHDPTLPRTEDHTCPKCAHREAVFFQAQSRRAEDEMRLYYVCTNTNCTHRW 127
>E3TF07_ICTPU (tr|E3TF07) DNA-directed RNA polymerase subunit OS=Ictalurus
punctatus GN=RPB9 PE=2 SV=1
Length = 126
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E ++L YACR+C++++ AD++ +Y N+I V Q +V
Sbjct: 14 GIRFCQECNNMLYPKEDKENRILLYACRNCDYRQEADNSCIYVNKITHEVDELTQIIADV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ DPTLPRT+ C +C H EAVFFQ+ + + E+ L +VC P CGHRW
Sbjct: 74 SQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRW 124
>B7FNR6_DROME (tr|B7FNR6) DNA-directed RNA polymerase subunit (Fragment)
OS=Drosophila melanogaster GN=RpII15-RA PE=2 SV=1
Length = 136
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 24 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 83
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 84 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 134
>B4NAN1_DROWI (tr|B4NAN1) DNA-directed RNA polymerase subunit OS=Drosophila
willistoni GN=Dwil\GK11344 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>Q299B2_DROPS (tr|Q299B2) DNA-directed RNA polymerase subunit OS=Drosophila
pseudoobscura pseudoobscura GN=Dpse\GA17176 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B4G4Z3_DROPE (tr|B4G4Z3) DNA-directed RNA polymerase subunit OS=Drosophila
persimilis GN=Dper\GL23270 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B4QZW6_DROSI (tr|B4QZW6) DNA-directed RNA polymerase subunit OS=Drosophila
simulans GN=Dsim\GD18953 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B4PT93_DROYA (tr|B4PT93) DNA-directed RNA polymerase subunit OS=Drosophila
yakuba GN=Dyak\GE24228 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B4HEP4_DROSE (tr|B4HEP4) DNA-directed RNA polymerase subunit OS=Drosophila
sechellia GN=Dsec\GM24158 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B3P0P5_DROER (tr|B3P0P5) DNA-directed RNA polymerase subunit OS=Drosophila
erecta GN=Dere\GG16847 PE=3 SV=1
Length = 129
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B3LZX4_DROAN (tr|B3LZX4) DNA-directed RNA polymerase subunit OS=Drosophila
ananassae GN=Dana\GF16163 PE=3 SV=1
Length = 129
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED + K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKDNKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>B4MBD3_DROVI (tr|B4MBD3) DNA-directed RNA polymerase subunit OS=Drosophila
virilis GN=Dvir\GJ14413 PE=3 SV=1
Length = 129
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED + K+L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKDNKILMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>F0ZUL3_DICPU (tr|F0ZUL3) DNA-directed RNA polymerase subunit OS=Dictyostelium
purpureum GN=DICPUDRAFT_81794 PE=3 SV=1
Length = 109
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
M FC CNN+LYPK D + L ACR C+H+E A +N VYRN+I+ SV Q++A
Sbjct: 1 MNFCSECNNMLYPKADRANRTLLLACRICDHKEEATNNCVYRNEIKHSVMEKTHISQDIA 60
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
ADPTLPRT++ +C QC EA FFQ+ T E G TL +VCC C +W
Sbjct: 61 ADPTLPRTRAAKCPQCGGREAAFFQSMT-VENGMTLFYVCC--ACSEKW 106
>C1BNL8_9MAXI (tr|C1BNL8) DNA-directed RNA polymerase subunit OS=Caligus
rogercresseyi GN=RPB9 PE=2 SV=1
Length = 127
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
++FC CNN+LYPKED E K L YACR+C+++++AD+N +Y N+I V +V
Sbjct: 16 IRFCLECNNMLYPKEDKENKALMYACRNCDYKQLADNNCIYVNKIMHEVDEVTNIVSDVI 75
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
DPTLPR++ C +C H EAVFFQ+ +R ++ L +VC P C HRW
Sbjct: 76 GDPTLPRSEDHPCPKCKHKEAVFFQSESRKADDEMRLYYVCTYPQCAHRW 125
>H9JEJ3_BOMMO (tr|H9JEJ3) DNA-directed RNA polymerase subunit OS=Bombyx mori
GN=Bmo.8904 PE=3 SV=1
Length = 127
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYP+ED KVL YACR+C+++++AD N VY N+I V +V
Sbjct: 17 GIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNKIMHEVDELTHINPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRTK C +CNH EAVFFQ T R EE L +VC +C HRW
Sbjct: 77 VSDPTLPRTKDHMCPKCNHREAVFFQGQTRRAEEEMRLYYVC--TSCKHRW 125
>A8QDP3_BRUMA (tr|A8QDP3) DNA-directed RNA polymerase subunit OS=Brugia malayi
GN=Bm1_52995 PE=3 SV=1
Length = 121
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYPKED E + L YACR+C+H++++++ +Y N++ V Q +V
Sbjct: 9 GIKFCPECNNMLYPKEDKENRQLLYACRNCDHKQLSENPCIYVNKLMHEVDELTQIVADV 68
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ C C EAVFFQ + R EE L +VC NPTC HRW D
Sbjct: 69 VHDPTLPKTEDHPCPMCRGREAVFFQAQSRRAEEEMRLYYVCMNPTCAHRWTD 121
>B4JS70_DROGR (tr|B4JS70) DNA-directed RNA polymerase subunit OS=Drosophila
grimshawi GN=Dgri\GH18685 PE=3 SV=1
Length = 129
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED + K L YACR+C++++ AD N +Y N+I + +V
Sbjct: 17 GIRFCQECNNMLYPKEDKDNKTLMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 77 ISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>E1ZLF2_CHLVA (tr|E1ZLF2) DNA-directed RNA polymerase subunit OS=Chlorella
variabilis GN=CHLNCDRAFT_25864 PE=3 SV=1
Length = 118
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIAD--DNIVYRNQIRQSVGRNPQAEQN 61
++FC N++LYP+ED E+K L Y CR C +QE AD + VYRN+++ + Q+
Sbjct: 8 LRFCPESNDLLYPREDKERKKLVYFCRSCQYQEDADPKEWCVYRNEVQHTSREKSVVLQD 67
Query: 62 VAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
V +DPTLPRT+ VRC +C + EAVFF ++T EEG TL F CC +CGHRWRD
Sbjct: 68 VRSDPTLPRTRDVRCPECANNEAVFFTSST--EEGMTLYFSCC--SCGHRWRD 116
>J0M906_LOALO (tr|J0M906) DNA-directed RNA polymerase subunit OS=Loa loa
GN=LOAG_16581 PE=3 SV=1
Length = 121
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYPKED E + L YACR+C+H++++++ +Y N++ V Q +V
Sbjct: 9 GIKFCPECNNMLYPKEDKENRQLLYACRNCDHKQLSENPCIYVNKLMHEVDELTQIVADV 68
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ C C EAVFFQ + R EE L +VC NP+C HRW D
Sbjct: 69 VHDPTLPKTEDHPCPMCQGREAVFFQAQSRRAEEEMRLYYVCMNPSCAHRWTD 121
>G6CYH4_DANPL (tr|G6CYH4) DNA-directed RNA polymerase subunit OS=Danaus plexippus
GN=KGM_17705 PE=3 SV=1
Length = 124
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYP+ED KVL YACR+C+++++AD N VY N+I V +V
Sbjct: 14 GIQFCQECNNMLYPREDKNNKVLQYACRNCDYKQLADSNCVYVNKIMHEVDELTHINPDV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRTK C +CNH EAVFFQ T R EE L +VC +C HRW
Sbjct: 74 VSDPTLPRTKDHVCPKCNHREAVFFQGQTRRAEEEMRLYYVC--TSCKHRW 122
>J9BJ75_WUCBA (tr|J9BJ75) DNA-directed RNA polymerase subunit OS=Wuchereria
bancrofti GN=WUBG_01624 PE=3 SV=1
Length = 121
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYPKED E + L YACR+C+H++++++ +Y N++ V Q +V
Sbjct: 9 GIKFCPECNNMLYPKEDKENRQLLYACRNCDHKQLSENPCIYVNKLMHEVDELTQIVADV 68
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ C C EAVFFQ + R EE L +VC NP+C HRW D
Sbjct: 69 VHDPTLPKTEDHPCPMCRGREAVFFQAQSRRAEEEMRLYYVCMNPSCAHRWTD 121
>E9GM94_DAPPU (tr|E9GM94) DNA-directed RNA polymerase subunit OS=Daphnia pulex
GN=DAPPUDRAFT_231046 PE=3 SV=1
Length = 127
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC CNN+LYPKED E + L YACR+C+ + +AD++ VY N+I + Q +V
Sbjct: 15 GIRFCPSCNNMLYPKEDKENRALLYACRNCDFKTLADNHCVYVNKIMHEIDELTQIVADV 74
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+DPTLPRT+ C +C H EAVFFQ+ + R EE L +VC N C HRW
Sbjct: 75 ISDPTLPRTEDHPCPKCTHREAVFFQSQSRRAEEEMRLYYVCTNSNCTHRW 125
>I0YSV9_9CHLO (tr|I0YSV9) DNA-directed RNA polymerase subunit OS=Coccomyxa
subellipsoidea C-169 GN=COCSUDRAFT_17601 PE=3 SV=1
Length = 117
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDN--IVYRNQIRQSVGRNPQAEQN 61
+KFC N++LYPKED E++ L Y CR+C +QE AD + VYRN+I + Q+
Sbjct: 7 LKFCPESNDLLYPKEDRERRKLVYHCRNCGYQEDADPSNYCVYRNEITHTNKERTVILQD 66
Query: 62 VAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
V +DPTLPRT+ V C +C H EAVFF +T EEG TL F CC CGHRWRD
Sbjct: 67 VRSDPTLPRTRDVICPKCAHNEAVFFSAST--EEGMTLFFNCCK--CGHRWRD 115
>G3RHC8_GORGO (tr|G3RHC8) DNA-directed RNA polymerase subunit (Fragment)
OS=Gorilla gorilla gorilla GN=POLR2I PE=3 SV=1
Length = 105
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 11 NNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPR 70
NN+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V+ DPTLPR
Sbjct: 1 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 60
Query: 71 TKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
T+ C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 61 TEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 103
>F1LCI4_ASCSU (tr|F1LCI4) DNA-directed RNA polymerase subunit OS=Ascaris suum
PE=2 SV=1
Length = 121
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYPKED E + L YACR+C+H++++++ +Y N++ + Q +V
Sbjct: 9 GIKFCPECNNMLYPKEDKENRQLMYACRNCDHKQVSENPCIYVNKLMHEIDELTQIVADV 68
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ C C EAVFFQ + R EE L +VC NP C HRW D
Sbjct: 69 IHDPTLPKTEDHPCPNCGGREAVFFQAQSRRAEEEMRLYYVCMNPGCTHRWTD 121
>Q55GG8_DICDI (tr|Q55GG8) DNA-directed RNA polymerase subunit OS=Dictyostelium
discoideum GN=rpb9 PE=3 SV=1
Length = 112
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Query: 11 NNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPR 70
NN+LYPK D K L ACR C+H+E A +N VYRN+IR SV Q Q++A+DPTLPR
Sbjct: 8 NNMLYPKADKANKTLLLACRICDHKEEATNNCVYRNEIRHSVMEKTQISQDIASDPTLPR 67
Query: 71 TKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
TK+ +C C EA FFQ+ T G TL +VC +CG RW
Sbjct: 68 TKAAKCPSCGGREAAFFQSMT-AANGMTLFYVC--ASCGERW 106
>B3RJJ7_TRIAD (tr|B3RJJ7) DNA-directed RNA polymerase subunit OS=Trichoplax
adhaerens GN=TRIADDRAFT_19600 PE=3 SV=1
Length = 129
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL Y CR+C + IA++ +Y N+I + Q +V
Sbjct: 17 GIQFCQECNNMLYPKEDKENKVLRYMCRNCEYSRIAENPCIYVNKITHEINELTQIIADV 76
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
ADPTLPRT+ C +C EAVFFQ +T E+ L +VC CGHRW +
Sbjct: 77 VADPTLPRTREHACPKCMEREAVFFQAQSTLAEDNMKLYYVCSVQGCGHRWTE 129
>E9IFN8_SOLIN (tr|E9IFN8) DNA-directed RNA polymerase subunit (Fragment)
OS=Solenopsis invicta GN=SINV_03971 PE=3 SV=1
Length = 136
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 7/117 (5%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACR------HCNHQEIADDNIVYRNQIRQSVGRNP 56
++FC+ CNN+LYPKED E KVL YA +C+ +++AD N +Y N+I +
Sbjct: 18 GIRFCQECNNMLYPKEDKENKVLMYAVSIQISLLNCDFKQLADSNCIYVNKIMHEIDELT 77
Query: 57 QAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
+V +DPTLPRT+ C +CNH EAVFFQ T R EE L +VC N C HRW
Sbjct: 78 HIVADVISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCSHRW 134
>H3HQP8_STRPU (tr|H3HQP8) DNA-directed RNA polymerase subunit
OS=Strongylocentrotus purpuratus PE=3 SV=1
Length = 103
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 13 ILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTK 72
+LYPKED E ++L YACR+C++Q+ AD+ VY N+I V Q V ADPTLPRT+
Sbjct: 1 MLYPKEDKENRILLYACRNCDYQQEADNACVYVNKITHEVDELTQIVAEVVADPTLPRTE 60
Query: 73 SVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
C C H E+VFFQ+ R EEG L +VC P CGHRW +
Sbjct: 61 DHPCEMCGHRESVFFQSQANRLEEGMRLYYVCTAPNCGHRWTE 103
>K7FXT0_PELSI (tr|K7FXT0) DNA-directed RNA polymerase subunit OS=Pelodiscus
sinensis GN=POLR2I PE=3 SV=1
Length = 103
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 13 ILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTK 72
+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V+ DPTLPRT+
Sbjct: 1 MLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPRTE 60
Query: 73 SVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 61 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 101
>D3YYI3_MOUSE (tr|D3YYI3) DNA-directed RNA polymerase subunit OS=Mus musculus
GN=Polr2i PE=2 SV=1
Length = 103
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 13 ILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTK 72
+LYPKED E ++L YACR+C++Q+ AD++ +Y N+I V Q +V+ DPTLPRT+
Sbjct: 1 MLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPRTE 60
Query: 73 SVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
C +C H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 61 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 101
>G4V5C0_SCHMA (tr|G4V5C0) DNA-directed RNA polymerase subunit OS=Schistosoma
mansoni GN=Smp_067090 PE=3 SV=1
Length = 126
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ FC CNN+LYPKED K LYYACR+C++ + AD+ VY N++ Q V +V
Sbjct: 14 GILFCSECNNMLYPKEDKRTKTLYYACRNCDYSQEADNPCVYINKLEQEVDELALIVPDV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
DPTLPRT+ C +C EAVFFQ+ T + EE L +VC N C H+W +
Sbjct: 74 VHDPTLPRTEDHICRRCGKQEAVFFQSQTLKAEENMRLYYVCTNVECLHKWTE 126
>H3ERC9_PRIPA (tr|H3ERC9) DNA-directed RNA polymerase subunit OS=Pristionchus
pacificus GN=WBGene00101894 PE=3 SV=1
Length = 386
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+KFC CNN+LYP+ED +++ L Y+CR+C H+++AD+ +Y N++ V Q +V
Sbjct: 174 IKFCPECNNMLYPREDKDRRQLLYSCRNCEHKQVADNQCIYVNKLMHEVDELTQIVADVV 233
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPT 107
DPTLP+T+ C +C H AVFFQ T R EE L +VC PT
Sbjct: 234 HDPTLPKTEDHPCPKCAHRNAVFFQAQTRRAEEEMRLYYVCMAPT 278
>Q5DAX2_SCHJA (tr|Q5DAX2) DNA-directed RNA polymerase subunit OS=Schistosoma
japonicum PE=2 SV=1
Length = 126
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ FC CNN+LYPKED K L+YACR+C++ + AD+ VY N++ Q V +V
Sbjct: 14 GILFCSECNNMLYPKEDKRTKTLFYACRNCDYSQEADNPCVYINKLEQEVDELALIVPDV 73
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
DPTLPRT+ C +C EAVFFQ+ T + EE L +VC N C H+W
Sbjct: 74 VHDPTLPRTEDHICRRCGKQEAVFFQSQTLKAEENMRLYYVCTNVECLHKW 124
>H2XG41_CAEJA (tr|H2XG41) DNA-directed RNA polymerase subunit OS=Caenorhabditis
japonica GN=WBGene00183782 PE=3 SV=1
Length = 144
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYP+ED E++VL YACR+C H+EIA + +Y N++ + Q ++
Sbjct: 32 GIKFCPECNNMLYPREDKEKRVLMYACRNCEHREIAANPCIYVNKLVHEIDELTQIVGDI 91
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
DPTLP+T+ C +C +AVFFQ T + EE L +VC C HRW
Sbjct: 92 IHDPTLPKTEEHPCPRCGKKKAVFFQAQTKKAEEEMRLYYVCAANDCQHRW 142
>Q965S0_CAEEL (tr|Q965S0) DNA-directed RNA polymerase subunit OS=Caenorhabditis
elegans GN=rpb-9 PE=3 SV=1
Length = 167
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYP+ED E +VL Y+CR+C H+E+A + +Y N++ + Q ++
Sbjct: 55 GIKFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVGDI 114
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ +C C +AVFFQ T + EE L +VC + C HRW +
Sbjct: 115 IHDPTLPKTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRWTE 167
>K8F4F7_9CHLO (tr|K8F4F7) DNA-directed RNA polymerase subunit OS=Bathycoccus
prasinos GN=Bathy14g02490 PE=3 SV=1
Length = 127
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M ++FC N++LYPKED E++ L Y CR+C++ AD + VYRN I + Q
Sbjct: 10 MVKLRFCPNSNDLLYPKEDRERQKLVYVCRNCDYLIDADSDCVYRNSIAHTSDEVTTVIQ 69
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+V DPTLPR+ RCS+C H EAVFF TT +G +L F C +C ++W+D
Sbjct: 70 DVRTDPTLPRSNDARCSKCGHREAVFFSLTT--TDGMSLFFQCV--SCAYKWKD 119
>C1FE61_MICSR (tr|C1FE61) DNA-directed RNA polymerase subunit OS=Micromonas sp.
(strain RCC299 / NOUM17) GN=MICPUN_51672 PE=3 SV=1
Length = 124
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
++FC N++LYPKED ++K L YACR+C ++ A D+ VYR+ I + Q+V
Sbjct: 13 LRFCPNSNDLLYPKEDRDRKKLIYACRNCEYKVDAIDHCVYRHSIHHTSAETTTIIQDVR 72
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
+DPTLPR+ V C C+HGEAVFF TT EG +L F C C +W+D
Sbjct: 73 SDPTLPRSSEVHCPSCDHGEAVFFSLTT--SEGMSLFFQCV--ACAGKWKD 119
>J9K2S8_ACYPI (tr|J9K2S8) Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV=1
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
++FC+ CNN+LYPKED E KVL YACR+C+H+++AD N +Y N+I + +V
Sbjct: 15 GIRFCQECNNMLYPKEDKEHKVLLYACRNCDHRQMADSNCIYVNKIMHEINELTHIVSDV 74
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEE 95
+DPTLPR++ C +C H E+VFFQ TR E
Sbjct: 75 TSDPTLPRSEDHPCPKCKHRESVFFQAQTRRAE 107
>I2FTT9_USTH4 (tr|I2FTT9) DNA-directed RNA polymerase subunit OS=Ustilago hordei
(strain Uh4875-4) GN=UHOR_07918 PE=3 SV=1
Length = 133
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MSS+ FC CNN+LYP+ D VL YACR+CN+Q+ + +++VYRN + P
Sbjct: 1 MSSLHFCAECNNLLYPEVDRTNHVLLYACRNCNYQQESRESLVYRNDLMSVTKEQPGIVD 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
N+ DPTL RT + C C HGEAV FQ + R L +VCC C H +RD
Sbjct: 61 NLMKDPTLRRTHDLNCPDCGHGEAVLFQDQSKRIMNRMILFYVCC--KCNHLFRD 113
>G0NIZ1_CAEBE (tr|G0NIZ1) DNA-directed RNA polymerase subunit OS=Caenorhabditis
brenneri GN=CAEBREN_09638 PE=3 SV=1
Length = 146
Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYP+ED + +VL Y+CR+C H+E+A + +Y N++ Q + Q ++
Sbjct: 36 GIKFCPECNNMLYPREDKDARVLMYSCRNCEHKEVAANPCIYVNKLVQEIDELTQIVTDI 95
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ C C +AVFFQ T + EE L +VC N C HRW +
Sbjct: 96 IHDPTLPKTEEHSCPLCKKRKAVFFQAQTKKAEEEMRLYYVCVN--CKHRWTE 146
>B4KC63_DROMO (tr|B4KC63) DNA-directed RNA polymerase subunit OS=Drosophila
mojavensis GN=Dmoj\GI10814 PE=3 SV=1
Length = 103
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 13 ILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTK 72
+LYPKED + K L YACR+C++++ AD N +Y N+I + +V +DPTLPRT+
Sbjct: 1 MLYPKEDKDNKTLMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPRTE 60
Query: 73 SVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
C +C+H EAVFFQ T R EE L +VC N C HRW
Sbjct: 61 DHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 101
>E3M0N8_CAERE (tr|E3M0N8) DNA-directed RNA polymerase subunit OS=Caenorhabditis
remanei GN=Cre-rpb-9 PE=3 SV=1
Length = 143
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYP+ED E +VL Y+CR+C H+E+A + +Y N++ + Q ++
Sbjct: 33 GIKFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVADI 92
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
DPTLP+T+ CS+C +AVFFQ T + EE L +VC C HRW +
Sbjct: 93 IHDPTLPKTEEHACSKCGKRKAVFFQAQTKKAEEEMRLYYVCA--YCQHRWTE 143
>M9M518_9BASI (tr|M9M518) RNA polymerase II subunit 9 OS=Pseudozyma antarctica
T-34 GN=PANT_16c00050 PE=4 SV=1
Length = 133
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MSS+ FC CNN+LYP+ D VL YACR+CN+Q+ + +++VYRN + P
Sbjct: 1 MSSLHFCAECNNLLYPEVDRTNHVLLYACRNCNYQQESRESLVYRNDLMSVTKEQPGIVD 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
N+ DPTL RT + C C HGEAV FQ ++ ++F C C H +RD
Sbjct: 61 NLMKDPTLRRTHDLSCPSCGHGEAVLFQDQSKRILNRMILFYVC-AKCNHLFRD 113
>E6ZRU1_SPORE (tr|E6ZRU1) DNA-directed RNA polymerase subunit OS=Sporisorium
reilianum (strain SRZ2) GN=sr16218 PE=3 SV=1
Length = 133
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MSS+ FC CNN+LYP+ D VL YACR+CN+Q+ + +++VYRN + P
Sbjct: 1 MSSLHFCAECNNLLYPEVDHTNHVLLYACRNCNYQQESRESLVYRNDLMSVTKEQPGIVD 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRWRD 114
N+ DPTL RT + C C HGEAV FQ + R L +VCC C H +RD
Sbjct: 61 NLMKDPTLRRTHDLNCPNCAHGEAVLFQDQSKRILNRMILFYVCC--RCNHLFRD 113
>F9X7U2_MYCGM (tr|F9X7U2) DNA-directed RNA polymerase subunit OS=Mycosphaerella
graminicola (strain CBS 115943 / IPO323)
GN=MYCGRDRAFT_69782 PE=3 SV=1
Length = 139
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FCR C+N+LYPKED + L +ACR C E A + ++RN +++ V +V
Sbjct: 23 TFRFCRECSNMLYPKEDRDNSSLMFACRTCQFSEPATASCIWRNSLKEDVQETAGNVLDV 82
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
A DPTLP + + C C +AVFFQ+ R E G L +VCCNP C H W
Sbjct: 83 AEDPTLPHS-DIMCKMCRGRDAVFFQSQQRTAETGMALFYVCCNPECKHVW 132
>M2LWU2_9PEZI (tr|M2LWU2) DNA-directed RNA polymerase subunit OS=Baudoinia
compniacensis UAMH 10762 GN=BAUCODRAFT_31455 PE=3 SV=1
Length = 137
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
S +FCR C+N+LYP ED L ++CR C + E A+ V+RN +R + P + V
Sbjct: 22 SFRFCRECSNMLYPAEDKISHELMFSCRMCAYSEKAETTCVFRNALRDEIAETPGNYKEV 81
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEE-GTTLVFVCCNPTCGHRW 112
A DPTLP T+ +C+QC +AVFFQ+ R E G L FVC N C H W
Sbjct: 82 AEDPTLPHTEDEQCAQCGERDAVFFQSQQRTRETGMALFFVCVN--CNHCW 130
>D3BKZ5_POLPA (tr|D3BKZ5) RNA polymerase II core subunit OS=Polysphondylium
pallidum GN=rpb9 PE=4 SV=1
Length = 110
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
M FC CNN+LYP D + L +C+ C+HQE A +N VYRN+I+ S+ Q ++A
Sbjct: 1 MNFCGECNNLLYPIADKVNRELLLSCKICDHQEKASNNCVYRNEIKHSIEERTQISHDIA 60
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFV 102
+DPTLPRTK +C C EA+FFQ+ + + TL F+
Sbjct: 61 SDPTLPRTKGSKCPACGGREAIFFQSMGQKSDKMTLFFI 99
>B6JXI0_SCHJY (tr|B6JXI0) DNA-directed RNA polymerase subunit
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936) GN=SJAG_00119 PE=3 SV=1
Length = 112
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
MS+ ++C CNN+LYP+ED + L ACR+C++ E+A ++VYR+++ S G Q
Sbjct: 1 MSNFQYCIECNNMLYPREDKVNRTLRLACRNCDYSEVAAGSMVYRHELMNSTGETAGVTQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRWRD 114
+VA+DPTLPRT+ C +C+ E VFFQ+ + R + TL FVC CG + D
Sbjct: 61 DVASDPTLPRTEK-ECKRCHQSECVFFQSQSRRADTKMTLFFVC--AYCGFIFED 112
>K0THW0_THAOC (tr|K0THW0) Uncharacterized protein OS=Thalassiosira oceanica
GN=THAOC_01103 PE=4 SV=1
Length = 176
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQ-AEQNV 62
M+FC +++LYPKE+ ++ L YACR C + E A ++Y+N +++ VG +V
Sbjct: 65 MRFCPHDSSMLYPKENPSERKLVYACRLCRYTEYAAGQLIYKNVLKKEVGNILHTVPADV 124
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTRG--EEGTTLVFVCCNPTCGHRW 112
+ DPTLPR+++ C +C H EAV+FQ+ T E L+FVCCN CG++W
Sbjct: 125 SDDPTLPRSQNAHCGKCGHSEAVYFQSDTSDVRSESLALIFVCCN--CGYKW 174
>C5XE10_SORBI (tr|C5XE10) Putative uncharacterized protein Sb02g039195 (Fragment)
OS=Sorghum bicolor GN=Sb02g039195 PE=4 SV=1
Length = 72
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%)
Query: 43 VYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFV 102
VY+ IR+ VG ++ A DP+LPRT+SVRC CNH EA FFQ T GE+ TL F+
Sbjct: 1 VYKRVIRKPVGEPKDVLKDAATDPSLPRTRSVRCYNCNHPEAAFFQAPTSGEQAMTLYFI 60
Query: 103 CCNPTCGHRWRD 114
CCNP+CGHRWRD
Sbjct: 61 CCNPSCGHRWRD 72
>R1BD52_EMIHU (tr|R1BD52) Uncharacterized protein OS=Emiliania huxleyi CCMP1516
GN=EMIHUDRAFT_62211 PE=4 SV=1
Length = 128
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 6 FCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAAD 65
C C N+L+PKED + L CRHC + AD N+V+ N +R G + +A + AD
Sbjct: 23 ICPECGNMLHPKEDKASRTLKRECRHCMRLDDADSNLVHVNDMRPEGGLS-EAGADTVAD 81
Query: 66 PTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWR 113
PTLPR C+ C H EAVFFQ + +EG L+F+C C +RW+
Sbjct: 82 PTLPRASGTECNSCGHTEAVFFQAPMKSDEGMKLIFMCTK--CAYRWK 127
>G0RSS4_HYPJQ (tr|G0RSS4) DNA-directed RNA polymerase subunit OS=Hypocrea
jecorina (strain QM6a) GN=TRIREDRAFT_81043 PE=3 SV=1
Length = 129
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED E + L + CR C + E A V+RN + S G Q+V
Sbjct: 21 TFRFCSECSNMLYPKEDEELRKLQFTCRTCQYTEDAQSTCVFRNVLNSSSGETAGVTQDV 80
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
A+DPTLPR+ C +C H EAVFFQ+ R + G L +VCC CGH +
Sbjct: 81 ASDPTLPRSNKT-CPKCAHQEAVFFQSQERSADTGMKLFYVCCE--CGHIF 128
>Q6QAQ8_PIG (tr|Q6QAQ8) DNA-directed RNA polymerase subunit (Fragment) OS=Sus
scrofa PE=2 SV=1
Length = 105
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 11 NNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPR 70
NN+LYPKED E ++L R+C++Q+ D++ +Y N+I VG Q +V+ DPTLPR
Sbjct: 1 NNMLYPKEDKENRILLSVSRNCDYQQEGDNSCIYVNKITPEVGELTQIIADVSQDPTLPR 60
Query: 71 TKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+ C + H EAVFFQ+ + R E+ L +VC P CGHRW
Sbjct: 61 NEDHPCQKRGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 103
>F4PHW6_DICFS (tr|F4PHW6) RNA polymerase II core subunit OS=Dictyostelium
fasciculatum (strain SH3) GN=rpb9 PE=4 SV=1
Length = 108
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
M FC CNN+LYP+ D K L C+ C+HQE A ++ VYRN+I+ S Q +++
Sbjct: 1 MNFCGECNNMLYPQADKINKTLLLVCKICDHQEEASNSCVYRNEIKHSTDERTQVLHDIS 60
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFV 102
DPTLPRTK +C C+ EA+FFQ+ + TL F+
Sbjct: 61 LDPTLPRTKGAKCHACDGREAIFFQSMGTKSDKMTLYFI 99
>A5DYL7_LODEL (tr|A5DYL7) DNA-directed RNA polymerase subunit OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=LELG_02454 PE=3 SV=1
Length = 112
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED + + L Y CR+C + EIADD+ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKDGQRLLYGCRNCGYNEIADDSKVYRHELMTNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C QC + + VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSNK-ECPQCYNRDCVFFQSQQRRKDTSMILFFVC 103
>K3ZLI8_SETIT (tr|K3ZLI8) Uncharacterized protein OS=Setaria italica
GN=Si027447m.g PE=4 SV=1
Length = 98
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 35 QEIADDNIVYRNQIRQSVGRNPQAE-QNVAADPTLPRTKSVRCSQCNHGEAVFF-QTTTR 92
QE++D N VYRN + + G QA ++VA+DP PR +SVR + C HGEA FF Q T R
Sbjct: 17 QEVSDSNCVYRNVVDHAAGEFTQALFEDVASDPAPPRARSVRFAACGHGEAFFFFQATVR 76
Query: 93 GEEGTTLVFVCCNPTCGHRWRD 114
GEE +L FVCCNP+CGHRWR+
Sbjct: 77 GEERVSLFFVCCNPSCGHRWRN 98
>Q59Z24_CANAL (tr|Q59Z24) DNA-directed RNA polymerase subunit OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=RPB9 PE=3 SV=1
Length = 112
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELMTNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C C H E VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECPDCGHHECVFFQSQQRRKDTSMILFFVC 103
>C4YK21_CANAW (tr|C4YK21) DNA-directed RNA polymerase subunit OS=Candida albicans
(strain WO-1) GN=CAWG_05816 PE=3 SV=1
Length = 112
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELMTNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C C H E VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECPDCGHHECVFFQSQQRRKDTSMILFFVC 103
>C7Z7Z8_NECH7 (tr|C7Z7Z8) DNA-directed RNA polymerase subunit OS=Nectria
haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596
/ MPVI) GN=NECHADRAFT_68831 PE=3 SV=1
Length = 131
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + L + CR C + E A V+RN + S G Q+V
Sbjct: 23 TFRFCSECSNMLYPKEDVDSHKLQFTCRTCQYTEDAQSTCVFRNVLNTSAGETAGVTQDV 82
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ C C H EAVFFQ+ R E G L +VCC CGH +
Sbjct: 83 GSDPTLPRSNKT-CPSCKHEEAVFFQSQQRSAETGMKLFYVCCE--CGHIF 130
>A3LYD6_PICST (tr|A3LYD6) DNA-directed RNA polymerase subunit OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=RPB9 PE=3 SV=1
Length = 112
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED + + L YACR+C + E+A++ VYR+++ ++G Q
Sbjct: 1 MASFRFCAECNNMLYPKEDKDGQRLLYACRNCGYTELAENPKVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ +DPTLPR+ C++C + E VFFQ+ R ++ + ++F C
Sbjct: 61 DIGSDPTLPRSDK-ECTKCGNKECVFFQSQQRRKDTSMILFYVC 103
>B9WC06_CANDC (tr|B9WC06) DNA-directed RNA polymerase subunit OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=CD36_21470 PE=3 SV=1
Length = 112
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELITNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C C H E VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECPDCGHHECVFFQSQQRRKDTSMILFFVC 103
>A4RSQ4_OSTLU (tr|A4RSQ4) DNA-directed RNA polymerase subunit OS=Ostreococcus
lucimarinus (strain CCE9901) GN=Rpb9 PE=3 SV=1
Length = 124
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
++FC N++LYPKED K L Y CR+C++ A +N V+R I S +V
Sbjct: 13 LRFCPNSNDLLYPKEDRVNKKLVYFCRNCDYTIAATENCVHRRTIFHSASEITAVIHDVR 72
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRWRD 114
DPTLPR+K V+CS C+ EAVFF TT EG +L F C N CG++W+D
Sbjct: 73 TDPTLPRSKDVQCSLCDAREAVFFSQTT--TEGMSLFFQCIN--CGNKWKD 119
>E0W154_PEDHC (tr|E0W154) DNA-directed RNA polymerase subunit OS=Pediculus
humanus subsp. corporis GN=Phum_PHUM569720 PE=3 SV=1
Length = 132
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACR-HCNHQEIADDNIVYRNQIRQSVGRNPQAEQN 61
++FC CNN+LYPKED E +L YA H N AD N +Y N+I + +
Sbjct: 19 GIRFCPECNNMLYPKEDKESHILLYAVSLHLNKYLSADSNCIYVNKIMHEIDELTHIVSD 78
Query: 62 VAADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRWRD 114
V +DPTLPR++ C +CN+ AVFFQ T R EE L +VC N C HRW +
Sbjct: 79 VISDPTLPRSEEHPCPKCNNRLAVFFQAQTRRAEEEMRLYYVCTNQHCCHRWTE 132
>N4U3W5_FUSOX (tr|N4U3W5) DNA-directed RNA polymerase II subunit RPB9 OS=Fusarium
oxysporum f. sp. cubense race 1 GN=FOC1_g10009383 PE=4
SV=1
Length = 131
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + L + CR C + E A V+RN + S G Q+V
Sbjct: 23 TFRFCSECSNMLYPKEDEDAHKLQFTCRTCQYTEDAKSTCVFRNVLNTSAGETAGVTQDV 82
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ C C H EAVFFQ+ R E G L +VCC CGH +
Sbjct: 83 GSDPTLPRSTKT-CPSCQHTEAVFFQSQQRSAETGMKLFYVCCE--CGHIF 130
>A8XD45_CAEBR (tr|A8XD45) DNA-directed RNA polymerase subunit OS=Caenorhabditis
briggsae GN=rpb-9 PE=3 SV=1
Length = 144
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+KFC CNN+LYP+ED E +VL Y+CR+C H+E+A + +Y N++ + Q ++
Sbjct: 34 GIKFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVADI 93
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
DPTLP+T+ C +C +AVFFQ T + EE L +VC C RW
Sbjct: 94 IHDPTLPKTEEHSCPKCTKRKAVFFQAQTKKAEEEMRLYYVCM--YCQFRW 142
>Q6BK95_DEBHA (tr|Q6BK95) DNA-directed RNA polymerase subunit OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=DEHA2F23760g PE=3 SV=1
Length = 112
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED + L Y+CR+C++ E+A++ VYR+++ ++G Q
Sbjct: 1 MASFRFCAECNNMLYPKEDKDNARLLYSCRNCDYTELAENPKVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ +DPTLPR+ S C C + ++VFFQ+ R ++ + ++F C
Sbjct: 61 DIGSDPTLPRS-SKECPDCGNKDSVFFQSQQRRKDTSMILFYVC 103
>F2QPE6_PICP7 (tr|F2QPE6) DNA-directed RNA polymerase subunit OS=Komagataella
pastoris (strain ATCC 76273 / CBS 7435 / CECT 11047 /
NRRL Y-11430 / Wegner 21-1) GN=RPB9 PE=3 SV=1
Length = 115
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L Y+CR+C++ E+A+D VYR+++ ++G
Sbjct: 1 MASFRFCLECNNMLYPKEDKENQRLLYSCRNCDYTELAEDPKVYRHELITNIGETAGIVD 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEE-GTTLVFVCCNPTCGHRWRD 114
++ DPTLPR+ C +C+ + VFFQ+ R ++ TL +VC N C +RD
Sbjct: 61 DIGQDPTLPRSDK-ECPECHSRDCVFFQSQQRRKDTNMTLFYVCLN--CKKTFRD 112
>C5M7A5_CANTT (tr|C5M7A5) DNA-directed RNA polymerase subunit OS=Candida
tropicalis (strain ATCC MYA-3404 / T1) GN=CTRG_01737
PE=3 SV=1
Length = 112
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G Q
Sbjct: 1 MASFRFCAECNNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELITNIGATAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C +C + E VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSNK-ECPECGNHECVFFQSQQRRKDTSMILFFVC 103
>D7M9S4_ARALL (tr|D7M9S4) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_915072 PE=4 SV=1
Length = 84
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 28/104 (26%)
Query: 18 EDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRCS 77
ED EQ +L YACR+C+HQE AD+N VYRN++ S +V C+
Sbjct: 2 EDKEQSILLYACRNCDHQEAADNNCVYRNEVHHS---------------------TVLCT 40
Query: 78 QCNHGEAVFFQT-------TTRGEEGTTLVFVCCNPTCGHRWRD 114
+C HGEAVFFQ T +GEEG TL FVC NP C HRWR+
Sbjct: 41 KCQHGEAVFFQVNHYLKEATAKGEEGMTLFFVCYNPNCSHRWRE 84
>L8FV90_GEOD2 (tr|L8FV90) DNA-directed RNA polymerase subunit OS=Geomyces
destructans (strain ATCC MYA-4855 / 20631-21)
GN=GMDG_07110 PE=3 SV=1
Length = 128
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + + L +ACR C + E A + V+RN + +VG Q+V
Sbjct: 20 TFRFCSECSNMLYPKEDNDTRQLQFACRTCQYSEPAISSCVFRNVLNNAVGETAGVTQDV 79
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
+DPTLPR+ C +C +AVFFQ+ R E G L +VCC CGH ++
Sbjct: 80 GSDPTLPRSNKA-CPKCKAEDAVFFQSQQRSAETGMKLFYVCCG--CGHIFQ 128
>G3B167_CANTC (tr|G3B167) DNA-directed RNA polymerase subunit OS=Candida tenuis
(strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 /
NBRC 10315 / NRRL Y-1498 / VKM Y-70)
GN=CANTEDRAFT_113650 PE=3 SV=1
Length = 112
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYP+ED + L Y+CR+C++ E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPREDRDNSRLLYSCRNCDYTELAENPKVYRHELITNIGETAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ +DPTLPR+ C CNH + VFFQ+ + ++ + L+F C
Sbjct: 61 DIGSDPTLPRSDK-ECPHCNHRDCVFFQSQQKRKDTSMLLFYVC 103
>B7FQG9_PHATC (tr|B7FQG9) Predicted protein OS=Phaeodactylum tricornutum (strain
CCAP 1055/1) GN=PHATRDRAFT_24922 PE=4 SV=1
Length = 111
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDN-IVYRNQIRQSVGRNPQ-AEQN 61
M+FC +++LYP+ED K+L YACR C + E A D ++YRN+ ++ VG +
Sbjct: 1 MRFCPHDSSMLYPQEDKRNKILQYACRLCRYVESAPDQPLIYRNERKKEVGNILHTVPSS 60
Query: 62 VAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ DPTL R++ C+ C EAVFFQ+ + L+FVCCN CGH+W
Sbjct: 61 ISDDPTLARSQKANCANCGRHEAVFFQSDVAQSDSLALIFVCCN--CGHKW 109
>Q4UDQ7_THEAN (tr|Q4UDQ7) DNA-directed RNA polymerase 2 subunit, putative
OS=Theileria annulata GN=TA11880 PE=4 SV=1
Length = 167
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIAD-----DNIVYRNQIRQSVGRN 55
M+ + FC CNNILY K D ++ L Y CR C+ I+D DN +YR + N
Sbjct: 1 MTEINFCPECNNILYAKADILKRQLRYFCRQCDFSRISDSKSSEDNCIYRTDYNIAGKEN 60
Query: 56 PQAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGH 110
V DPTL RT RC +C H +AVFFQ R ++ LVFVCCNP CG+
Sbjct: 61 IFVSPMVVKDPTLGRTTRWRCLKCGHQKAVFFQLPERVTDDAMMLVFVCCNPGCGY 116
>B6Q946_PENMQ (tr|B6Q946) DNA-directed RNA polymerase subunit OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_070860 PE=3 SV=1
Length = 129
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED Q L + CR C+ E A VY+N + VG Q+V
Sbjct: 22 FKFCRECSNLLYPKEDRVQNRLMFTCRTCHVSEPATSPCVYQNNLNTQVGETAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG+ +
Sbjct: 82 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 128
>B8BUI2_THAPS (tr|B8BUI2) Predicted protein OS=Thalassiosira pseudonana
GN=THAPSDRAFT_39536 PE=4 SV=1
Length = 112
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQ-AEQNV 62
M+FC +++LYPKE+ ++ L YACR C + E A ++Y+N +++ VG V
Sbjct: 1 MRFCPHDSSMLYPKENRNERKLLYACRLCRYTEYAPGQLIYQNILKKEVGNVLHTVPSAV 60
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTT--LVFVCCNPTCGHRW 112
+ DPTLPR+++ C +C H EAVFFQ+ T T L+FVCCN C H+W
Sbjct: 61 SDDPTLPRSQNAHCDKCGHNEAVFFQSDTSDVRNDTLALIFVCCN--CDHKW 110
>C1MJZ9_MICPC (tr|C1MJZ9) Predicted protein OS=Micromonas pusilla (strain
CCMP1545) GN=MICPUCDRAFT_64136 PE=4 SV=1
Length = 154
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
++FC N++LYPKED K L YACR+C+ Q ADD+ V+R+ + + Q+V
Sbjct: 25 LRFCPNSNDLLYPKEDRALKKLIYACRNCDFQVEADDHCVFRHLVHHTAAETTTVIQDVR 84
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVF 101
DPTLPR+ VRCS+C + +AVFF TT EG +L F
Sbjct: 85 TDPTLPRSSHVRCSRCENADAVFFSLTT--SEGMSLFF 120
>G9NC40_HYPVG (tr|G9NC40) DNA-directed RNA polymerase subunit OS=Hypocrea virens
(strain Gv29-8 / FGSC 10586) GN=TRIVIDRAFT_217184 PE=3
SV=1
Length = 130
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + L + CR C + E A V+RN + S G Q+V
Sbjct: 22 TFRFCSECSNMLYPKEDEDAHKLQFTCRTCQYTEDAQSTCVFRNVLNNSSGETAGVTQDV 81
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ C +C+H EAVFFQ+ R + G L +VCC CGH +
Sbjct: 82 GSDPTLPRSNKA-CPRCSHQEAVFFQSQERSADTGMKLFYVCCE--CGHIF 129
>Q4N5T6_THEPA (tr|Q4N5T6) DNA-directed RNA polymerase II subunit, putative
OS=Theileria parva GN=TP02_0205 PE=4 SV=1
Length = 167
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIAD-----DNIVYRNQIRQSVGRN 55
M+ + FC CNNILY K D ++ L Y CR C+ I+D DN +YR + N
Sbjct: 1 MTEINFCPECNNILYAKADILKRQLRYFCRQCDFSRISDSKSSEDNCIYRTDYNIAGKEN 60
Query: 56 PQAEQNVAADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGH 110
V DPTL RT RC +C H +AVFFQ R ++ LVFVCCNP CG+
Sbjct: 61 IFVSPMVVKDPTLGRTTRWRCLKCGHQKAVFFQLPERVTDDAMMLVFVCCNPGCGY 116
>H8X3A3_CANO9 (tr|H8X3A3) DNA-directed RNA polymerase subunit OS=Candida
orthopsilosis (strain 90-125) GN=CORT_0C05900 PE=3 SV=1
Length = 112
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEDQRLLYACRNCGYTELAENPKVYRHELMTNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C++C + + VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECTRCGNRDCVFFQSQQRRKDTSMILFFVC 103
>G8BJN0_CANPC (tr|G8BJN0) DNA-directed RNA polymerase subunit OS=Candida
parapsilosis (strain CDC 317 / ATCC MYA-4646)
GN=CPAR2_406490 PE=3 SV=1
Length = 112
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEDQRLLYACRNCGYTELAENPKVYRHELMTNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C++C + + VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECTRCGNRDCVFFQSQQRRKDTSMILFFVC 103
>D8LE56_ECTSI (tr|D8LE56) DNA-directed RNA polymerase subunit OS=Ectocarpus
siliculosus GN=Esi_0013_0022 PE=3 SV=1
Length = 237
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADD-NIVYRNQIRQSVGRNPQAEQ- 60
+M+FC CNNI++PKE+ + L Y+C C ++E A + VYRN + + G Q
Sbjct: 123 TMRFCSECNNIMHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQT 182
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGE-EGTTLVFVCCNPTCGHRW 112
+V DPTL R+K+ C +CN+ EAVFFQ + + +L+FVC N CGH+W
Sbjct: 183 DVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 235
>I4YGT0_WALSC (tr|I4YGT0) DNA-directed RNA polymerase subunit OS=Wallemia sebi
(strain ATCC MYA-4683 / CBS 633.66) GN=WALSEDRAFT_15227
PE=3 SV=1
Length = 112
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
S+KFC+ CNN+LYP+ED E++ L +ACR+CN +E A + VYRN + + Q++
Sbjct: 2 SLKFCQNCNNLLYPREDRERRTLLFACRNCNFEESAVEARVYRNDLMRQSKEEAGVTQDL 61
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
DPTLPRT ++ C +C ++VFFQ + R E TL +VC +C H +
Sbjct: 62 GKDPTLPRT-NIECPKCLSSQSVFFQDQSKRTETRMTLFYVCI--SCNHAF 109
>C9SDJ5_VERA1 (tr|C9SDJ5) DNA-directed RNA polymerase subunit OS=Verticillium
albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC
10136) GN=VDBG_02525 PE=3 SV=1
Length = 132
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPK+D L + CR C++ E A + V+RN + + G Q+V
Sbjct: 21 TFRFCSECSNMLYPKQDDNSHRLQFTCRTCHYTEEAQSSCVFRNVMNNAAGETAGVTQDV 80
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
+DPTLPR + + C C+H EAVFFQ+ R E G L +VCC CGH ++
Sbjct: 81 GSDPTLPR-EIISCPSCSHNEAVFFQSQQRSAETGMKLFYVCCE--CGHIFQ 129
>G3AKQ8_SPAPN (tr|G3AKQ8) DNA-directed RNA polymerase subunit OS=Spathaspora
passalidarum (strain NRRL Y-27907 / 11-Y1)
GN=SPAPADRAFT_54934 PE=3 SV=1
Length = 112
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELMTNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C +C + E VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECPKCANRECVFFQSQQRRKDTSMILFYVC 103
>A5DAZ0_PICGU (tr|A5DAZ0) DNA-directed RNA polymerase subunit OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PGUG_00445 PE=3
SV=1
Length = 112
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYP+ED E L Y+CR+C++ E+A++ VYR+++ ++G Q
Sbjct: 1 MASFRFCAECNNMLYPREDKENSRLLYSCRNCDYTELAENPKVYRHELMTNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C +C++ + VFFQ+ R ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECPRCSNKDCVFFQSQQRRKDTSMILFYVC 103
>B6Q947_PENMQ (tr|B6Q947) DNA-directed RNA polymerase subunit OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_070860 PE=3 SV=1
Length = 145
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED Q L + CR C+ E A VY+N + VG Q+V
Sbjct: 22 FKFCRECSNLLYPKEDRVQNRLMFTCRTCHVSEPATSPCVYQNNLNTQVGETAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVC 103
+DPTLPR+ + C C EAVFFQ+ R E ++FVC
Sbjct: 82 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMVIFVC 120
>K1W766_MARBU (tr|K1W766) DNA-directed RNA polymerase subunit OS=Marssonina
brunnea f. sp. multigermtubi (strain MB_m1) GN=MBM_09129
PE=3 SV=1
Length = 128
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + L +ACR C E A V+RN + +VG Q+V
Sbjct: 20 TFRFCSECSNMLYPKEDPDTHRLQFACRTCQFSEEATSTCVFRNILNNAVGETAGVTQDV 79
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ C +C +AVFFQ+ R E G L +VCC CGH +
Sbjct: 80 GSDPTLPRSNKT-CPKCKTEDAVFFQSQQRSAETGMKLFYVCCG--CGHIF 127
>C6H4I7_AJECH (tr|C6H4I7) DNA-directed RNA polymerase subunit OS=Ajellomyces
capsulata (strain H143) GN=HCDG_01426 PE=3 SV=1
Length = 129
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L + CR C+ E A VY+N++ VG Q+V
Sbjct: 22 FRFCRECSNLLYPKEDRNTNTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG+ +
Sbjct: 82 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 128
>C0NM38_AJECG (tr|C0NM38) DNA-directed RNA polymerase subunit OS=Ajellomyces
capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC
2432) GN=HCBG_04568 PE=3 SV=1
Length = 129
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L + CR C+ E A VY+N++ VG Q+V
Sbjct: 22 FRFCRECSNLLYPKEDRNTNTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG+ +
Sbjct: 82 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 128
>F2TFA7_AJEDA (tr|F2TFA7) DNA-directed RNA polymerase subunit OS=Ajellomyces
dermatitidis (strain ATCC 18188 / CBS 674.68)
GN=BDDG_04863 PE=3 SV=1
Length = 128
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L + CR C+ E A VY+N++ VG Q+V
Sbjct: 21 FRFCRECSNLLYPKEDRNTHTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVG 80
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG+ +
Sbjct: 81 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 127
>M3JEB9_CANMA (tr|M3JEB9) DNA-directed RNA polymerase subunit (Fragment)
OS=Candida maltosa Xu316 GN=G210_2249 PE=3 SV=1
Length = 112
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E + L YACR+C + E+A++ VYR+++ ++G +
Sbjct: 1 MASFRFCAECNNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELITNIGATAGVVE 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ C +C + E VFFQ+ + ++ + ++F C
Sbjct: 61 DIGNDPTLPRSDK-ECPECQNHECVFFQSQQKRKDTSMILFYVC 103
>J7S026_KAZNA (tr|J7S026) DNA-directed RNA polymerase subunit OS=Kazachstania
naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797
/ CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082)
GN=KNAG0F02000 PE=3 SV=1
Length = 122
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED + K L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKDNKRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTT-RGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ RG+ L FVC +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSHENVFFQSQQRRGDTSMVLFFVCL--SCSHIF 110
>M7U8U9_BOTFU (tr|M7U8U9) Putative dna-directed rna polymerase ii subunit rpb9
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_1264
PE=4 SV=1
Length = 128
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + L +ACR C + E A + V+RN + +VG Q+V
Sbjct: 20 TFRFCSECSNMLYPKEDPDTHRLQFACRTCQYSEEAVSSCVFRNVLNNAVGETAGVTQDV 79
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
+DPTLPR+ C C + +AVFFQ+ R E G L +VCC CGH ++
Sbjct: 80 GSDPTLPRSNKT-CPACRNEDAVFFQSQQRSAETGMKLFYVCCG--CGHIFQ 128
>G2YW94_BOTF4 (tr|G2YW94) DNA-directed RNA polymerase subunit OS=Botryotinia
fuckeliana (strain T4) GN=BofuT4_P150240.1 PE=3 SV=1
Length = 128
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED + L +ACR C + E A + V+RN + +VG Q+V
Sbjct: 20 TFRFCSECSNMLYPKEDPDTHRLQFACRTCQYSEEAVSSCVFRNVLNNAVGETAGVTQDV 79
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
+DPTLPR+ C C + +AVFFQ+ R E G L +VCC CGH ++
Sbjct: 80 GSDPTLPRSNKT-CPACRNEDAVFFQSQQRSAETGMKLFYVCCG--CGHIFQ 128
>G2R9N3_THITE (tr|G2R9N3) DNA-directed RNA polymerase subunit OS=Thielavia
terrestris (strain ATCC 38088 / NRRL 8126)
GN=THITE_2118310 PE=3 SV=1
Length = 128
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYPKED ++ L + CR CN E A ++RN + + Q+V
Sbjct: 20 AFRFCSECSNMLYPKEDEAERKLMFTCRTCNFSEEATSMCIFRNAMNNAASETAGVTQDV 79
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
++DPTLPR+ C C H EAVFFQ+ R E G L +VCC CG+ ++
Sbjct: 80 SSDPTLPRSNRT-CPACKHEEAVFFQSQQRSAETGMKLFYVCCE--CGNIFQ 128
>C4YCH6_CLAL4 (tr|C4YCH6) DNA-directed RNA polymerase subunit OS=Clavispora
lusitaniae (strain ATCC 42720) GN=CLUG_05815 PE=3 SV=1
Length = 112
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYP+ED + L Y+CR+C++ E+A++ VYR+++ ++G Q
Sbjct: 1 MASFRFCAECNNMLYPREDKDNARLLYSCRNCDYTELAENPKVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ +DPTLPR+ + C C + + VFFQ+ + ++ + ++F C
Sbjct: 61 DIGSDPTLPRSNKI-CPHCGNHDCVFFQSQQKRKDTSMILFYVC 103
>G8YGC5_PICSO (tr|G8YGC5) DNA-directed RNA polymerase subunit OS=Pichia
sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS
7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_003594 PE=3
SV=1
Length = 112
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M+S +FC CNN+LYPKED E L Y+CR+C + E+A++ VYR+++ ++G Q
Sbjct: 1 MASFRFCAECNNMLYPKEDKENARLLYSCRNCTYTELAENPKVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCC 104
++ DPTLPR+ + C C VFFQ+ R ++ + ++F C
Sbjct: 61 DIGKDPTLPRSSKL-CPNCEARNCVFFQSQQRRKDTSMILFYVC 103
>F2SK76_TRIRC (tr|F2SK76) DNA-directed RNA polymerase subunit OS=Trichophyton
rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG_03429
PE=3 SV=1
Length = 131
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED L +ACR C+ E A V++N++ VG Q++
Sbjct: 24 FKFCRECSNLLYPKEDRATNSLVFACRTCHVAEPATSYCVFQNKLHSQVGDTAGVTQDIG 83
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG +
Sbjct: 84 NDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 130
>F2RQI4_TRIT1 (tr|F2RQI4) DNA-directed RNA polymerase subunit OS=Trichophyton
tonsurans (strain CBS 112818) GN=TESG_01125 PE=3 SV=1
Length = 130
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED L +ACR C+ E A V++N++ VG Q++
Sbjct: 23 FKFCRECSNLLYPKEDRATNSLVFACRTCHVAEPATSYCVFQNKLHSQVGDTAGVTQDIG 82
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG +
Sbjct: 83 NDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 129
>F2PLZ2_TRIEC (tr|F2PLZ2) DNA-directed RNA polymerase subunit OS=Trichophyton
equinum (strain ATCC MYA-4606 / CBS 127.97)
GN=TEQG_01948 PE=3 SV=1
Length = 130
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED L +ACR C+ E A V++N++ VG Q++
Sbjct: 23 FKFCRECSNLLYPKEDRATNSLVFACRTCHVAEPATSYCVFQNKLHSQVGDTAGVTQDIG 82
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG +
Sbjct: 83 NDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 129
>F7WAW3_SORMK (tr|F7WAW3) DNA-directed RNA polymerase subunit OS=Sordaria
macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) /
K-hell) GN=SMAC_08817 PE=3 SV=1
Length = 130
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 3 SMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNV 62
+ +FC C+N+LYP+E ++ L + CR CN E A +YRN + + G Q+V
Sbjct: 22 TFRFCSECSNMLYPREAEDENKLLFTCRTCNFSEPATSTCIYRNILNNAAGETAGVTQDV 81
Query: 63 AADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
+DPTLPR + C C+H EAVFFQ+ R E G L +VCC+ CG+ ++
Sbjct: 82 GSDPTLPRAIN-ECPACHHPEAVFFQSQQRTSETGMKLFYVCCD--CGNIYQ 130
>E9DD97_COCPS (tr|E9DD97) DNA-directed RNA polymerase subunit OS=Coccidioides
posadasii (strain RMSCC 757 / Silveira) GN=CPSG_08059
PE=3 SV=1
Length = 129
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L ++CR C+ E A + VY+N++ VG Q+V
Sbjct: 22 FRFCRECSNLLYPKEDRATNTLMFSCRTCHVGEPATSHCVYQNKLNSQVGDTAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC CG +
Sbjct: 82 SDPTLPRSNRL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--ACGKVF 128
>C5PHU6_COCP7 (tr|C5PHU6) DNA-directed RNA polymerase subunit OS=Coccidioides
posadasii (strain C735) GN=CPC735_054690 PE=3 SV=1
Length = 129
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L ++CR C+ E A + VY+N++ VG Q+V
Sbjct: 22 FRFCRECSNLLYPKEDRATNTLMFSCRTCHVGEPATSHCVYQNKLNSQVGDTAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC CG +
Sbjct: 82 SDPTLPRSNRL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--ACGKVF 128
>C1GD69_PARBD (tr|C1GD69) DNA-directed RNA polymerase subunit OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_05205 PE=3 SV=1
Length = 128
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L Y CR C+ E A V++N++ VG Q+V
Sbjct: 21 FRFCRECSNLLYPKEDRASNKLMYTCRTCHVGEPATSPCVFQNKLNTQVGDTAGVTQDVG 80
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG +
Sbjct: 81 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 127
>C0SHR0_PARBP (tr|C0SHR0) DNA-directed RNA polymerase subunit OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_07240 PE=3 SV=1
Length = 128
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L Y CR C+ E A V++N++ VG Q+V
Sbjct: 21 FRFCRECSNLLYPKEDRASNKLMYTCRTCHVGEPATSPCVFQNKLNTQVGDTAGVTQDVG 80
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG +
Sbjct: 81 SDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 127
>M2TGR4_COCHE (tr|M2TGR4) DNA-directed RNA polymerase subunit OS=Bipolaris maydis
C5 GN=COCHEDRAFT_1117563 PE=3 SV=1
Length = 132
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FC C+N+L+P+ED + L +ACR CN E A + V R++I +VG VA
Sbjct: 20 FRFCSECSNLLFPREDKSENKLLFACRTCNFTEEAPSSCVMRHEIASTVGATAGVTAEVA 79
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
DPTLPR + +C++C EAVFFQ+ R E G L +VC CGH R
Sbjct: 80 QDPTLPRVQK-QCTECGENEAVFFQSQQRTAETGMALYYVCAG--CGHVTR 127
>M2T2X2_COCSA (tr|M2T2X2) DNA-directed RNA polymerase subunit OS=Bipolaris
sorokiniana ND90Pr GN=COCSADRAFT_37167 PE=3 SV=1
Length = 132
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FC C+N+L+P+ED + L +ACR CN E A + V R++I +VG VA
Sbjct: 20 FRFCSECSNLLFPREDKSENKLLFACRTCNFTEEAPSSCVMRHEIASTVGATAGVTAEVA 79
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
DPTLPR + +C++C EAVFFQ+ R E G L +VC CGH R
Sbjct: 80 QDPTLPRVQK-QCTECGENEAVFFQSQQRTAETGMALYYVCAG--CGHVTR 127
>E4UQ25_ARTGP (tr|E4UQ25) DNA-directed RNA polymerase subunit (Fragment)
OS=Arthroderma gypseum (strain ATCC MYA-4604 / CBS
118893) GN=MGYG_02171 PE=3 SV=1
Length = 131
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED L +ACR C+ E A V++N++ VG Q++
Sbjct: 24 FKFCRECSNLLYPKEDRTTNSLVFACRTCHVAEPATSYCVFQNKLHSQVGDTAGVTQDIG 83
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
DPTLPR+ + C C EAVFFQ+ R E G L +VCC TCG +
Sbjct: 84 NDPTLPRSNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 130
>J3KHZ9_COCIM (tr|J3KHZ9) DNA-directed RNA polymerase subunit OS=Coccidioides
immitis (strain RS) GN=CIMG_00841 PE=3 SV=1
Length = 129
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L ++CR C+ E A + VY+N++ VG Q+V
Sbjct: 22 FRFCRECSNLLYPKEDRATNTLMFSCRTCHVGEPATSHCVYQNKLNSQVGDTAGVTQDVG 81
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC CG +
Sbjct: 82 SDPTLPRSNRL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--ACGKVF 128
>R0JRC2_SETTU (tr|R0JRC2) Uncharacterized protein OS=Setosphaeria turcica Et28A
GN=SETTUDRAFT_94521 PE=4 SV=1
Length = 132
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FC C+N+L+P+ED + L +ACR CN E A + V R++I +VG VA
Sbjct: 20 FRFCSECSNLLFPREDKSENKLLFACRTCNFTEEAPSSCVMRHEIASTVGATAGVTAEVA 79
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
DPTLPR + +C++C EAVFFQ+ R E G L +VC CGH R
Sbjct: 80 QDPTLPRVQK-QCTECGENEAVFFQSQQRTAETGMALYYVCAG--CGHVSR 127
>K7UD45_MAIZE (tr|K7UD45) Uncharacterized protein OS=Zea mays GN=ZEAMMB73_979071
PE=4 SV=1
Length = 244
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 22 QKVLYYACRHCNHQ-----EIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTKSVRC 76
+++Y+C E++D+N VYRN++ + G Q Q+VA+DPTLPRTK+VRC
Sbjct: 157 SAIVFYSCLRLEKISELLCEVSDNNCVYRNEVHHTAGERTQVLQDVASDPTLPRTKTVRC 216
Query: 77 SQCNHGEAVFFQTTTRGEEGTTL 99
+ C HGEAVFFQ RGEEG TL
Sbjct: 217 NLCGHGEAVFFQAAARGEEGMTL 239
>B2WH54_PYRTR (tr|B2WH54) DNA-directed RNA polymerase subunit OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_09313 PE=3
SV=1
Length = 137
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FC C+N+L+P+ED + L +ACR C+ E A + V R++I +VG VA
Sbjct: 20 FRFCSECSNLLFPREDKSENKLLFACRTCSFTEEAPSSCVMRHEIASTVGATAGVTAEVA 79
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRWR 113
DPTLPR + +C++C EAVFFQ+ R E G L FVC CGH R
Sbjct: 80 QDPTLPRIQK-QCTECGENEAVFFQSQQRTAETGMALYFVCAG--CGHVSR 127
>C5E010_ZYGRC (tr|C5E010) DNA-directed RNA polymerase subunit
OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732
/ NBRC 1130 / NCYC 568 / NRRL Y-229) GN=ZYRO0G08800g
PE=3 SV=1
Length = 122
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E + L + CR C++ E A + +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDNENQRLLFECRTCSYVEEAGNPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LVCSHIF 110
>B6H263_PENCW (tr|B6H263) DNA-directed RNA polymerase subunit OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=Pc13g04110 PE=3 SV=1
Length = 128
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
KFCR C+N+LYPKED L + CR C+ E A + VY+N + VG Q+V
Sbjct: 21 FKFCRECSNLLYPKEDRVNNQLMFTCRTCHVGEPASSHCVYQNHLHSQVGDTAGVTQDVT 80
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR + C C EAVFFQ+ R E G L +VCC CG +
Sbjct: 81 SDPTLPRANKL-CPSCGETEAVFFQSQQRSAETGMKLYYVCC--ACGQVY 127
>G7Y6B1_CLOSI (tr|G7Y6B1) DNA-directed RNA polymerase subunit OS=Clonorchis
sinensis GN=CLF_101679 PE=3 SV=1
Length = 247
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 13 ILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVAADPTLPRTK 72
+LYPKED K L YACR+C++ + AD+ VY N++ Q V +V DPTLPRT+
Sbjct: 1 MLYPKEDKRNKRLNYACRNCDYTQEADNPCVYINKLEQEVDELALIVPDVVHDPTLPRTE 60
Query: 73 SVRCSQCNHGEAVFFQT-TTRGEEGTTLVFVCCNPTCGHRW 112
+C C EAVFFQ+ T + EE L +VC N C H+W
Sbjct: 61 DHKCRNCGKQEAVFFQSQTLKAEENMRLYYVCTNLECLHKW 101
>B8NBS3_ASPFN (tr|B8NBS3) DNA-directed RNA polymerase subunit OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=AFLA_046480 PE=3 SV=1
Length = 128
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 4 MKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQNVA 63
+FCR C+N+LYPKED L + CR C+ E A VY+N++ VG Q+V
Sbjct: 21 FRFCRECSNLLYPKEDRVNNRLMFTCRTCHVGEPASSYCVYQNKLNSQVGDTAGVTQDVG 80
Query: 64 ADPTLPRTKSVRCSQCNHGEAVFFQTTTR-GEEGTTLVFVCCNPTCGHRW 112
+DPTLPR+ + C C EAVFFQ+ R E G L +VCC CG+ +
Sbjct: 81 SDPTLPRSNKL-CPSCGEAEAVFFQSQQRSAETGMKLYYVCC--ACGNVF 127
>G8JP49_ERECY (tr|G8JP49) DNA-directed RNA polymerase subunit OS=Eremothecium
cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166
/ NRRL Y-17582) GN=Ecym_2205 PE=3 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E++ L + CR C + E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKEEQRLLFECRTCTYAEEAGTPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ + VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSHDNVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110
>N1P3K7_YEASX (tr|N1P3K7) Rpb9p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_2904 PE=4 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110
>J8Q267_SACAR (tr|J8Q267) DNA-directed RNA polymerase subunit OS=Saccharomyces
arboricola (strain H-6 / AS 2.3317 / CBS 10644)
GN=SU7_1145 PE=3 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110
>G2WE27_YEASK (tr|G2WE27) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain Kyokai no. 7 / NBRC 101557)
GN=K7_RPB9 PE=3 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110
>C8Z8H7_YEAS8 (tr|C8Z8H7) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1G1_2201g PE=3 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110
>C7GW42_YEAS2 (tr|C7GW42) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain JAY291) GN=RPB9 PE=3 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110
>B3LHD8_YEAS1 (tr|B3LHD8) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=SCRG_01071 PE=3 SV=1
Length = 122
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 1 MSSMKFCRRCNNILYPKEDTEQKVLYYACRHCNHQEIADDNIVYRNQIRQSVGRNPQAEQ 60
M++ +FCR CNN+LYP+ED E L + CR C++ E A +VYR+++ ++G Q
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 61 NVAADPTLPRTKSVRCSQCNHGEAVFFQTTTRGEEGTTLVFVCCNPTCGHRW 112
++ +DPTLPR+ C +C+ E VFFQ+ R ++ + ++F C +C H +
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC-LSCSHIF 110