Miyakogusa Predicted Gene

Lj4g3v1983580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983580.1 Non Chatacterized Hit- tr|I3SR53|I3SR53_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,0.000000000000009, ,BP058457.path1.1
         (41 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SR53_LOTJA (tr|I3SR53) Uncharacterized protein OS=Lotus japoni...    60   3e-07

>I3SR53_LOTJA (tr|I3SR53) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 41

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 28/41 (68%)

Query: 1  MSSAVIFGVCSNXXXXXXXXXXXXXCLCFREMWSHHTRQIC 41
          MSSAVIFGVCSN             CLCFREMWSHHTRQIC
Sbjct: 1  MSSAVIFGVCSNTATVAVETAAIEVCLCFREMWSHHTRQIC 41