Miyakogusa Predicted Gene
- Lj4g3v1108180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1108180.1 Non Chatacterized Hit- tr|I1MMB7|I1MMB7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,63.36,0,DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL,DNA-directed
RNA polymerase, phage-type; no
description,N,NODE_37037_length_3713_cov_14.511716.path2.1
(853 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine ... 1183 0.0
F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vi... 1131 0.0
B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus ... 1123 0.0
B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus ... 1112 0.0
M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persi... 1095 0.0
Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sa... 1068 0.0
B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sa... 1066 0.0
Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sa... 1066 0.0
I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza gl... 1065 0.0
C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum ... 1061 0.0
J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza br... 1058 0.0
B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus ... 1055 0.0
K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria ... 1054 0.0
D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vi... 1045 0.0
K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum ... 1041 0.0
P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopod... 1041 0.0
M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acu... 1041 0.0
M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persi... 1040 0.0
E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar a... 1040 0.0
I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypo... 1034 0.0
Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays... 1025 0.0
E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar a... 1019 0.0
Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum... 1009 0.0
Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) ... 1005 0.0
K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine ... 997 0.0
M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica... 993 0.0
F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidop... 993 0.0
R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rub... 993 0.0
K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max ... 989 0.0
D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidop... 988 0.0
B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica... 987 0.0
Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia... 987 0.0
M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica... 987 0.0
K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine ... 984 0.0
B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus ... 977 0.0
Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cle... 963 0.0
D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidop... 962 0.0
R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rub... 961 0.0
F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidop... 958 0.0
E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar a... 952 0.0
K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max ... 946 0.0
K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max ... 946 0.0
G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago... 939 0.0
K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max ... 935 0.0
M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persi... 911 0.0
F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vi... 900 0.0
B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus ... 895 0.0
M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acu... 892 0.0
B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus ... 891 0.0
Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia... 879 0.0
M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica... 876 0.0
M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulg... 873 0.0
K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum ... 873 0.0
R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rub... 872 0.0
D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidop... 870 0.0
Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidop... 868 0.0
F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidop... 867 0.0
Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sa... 859 0.0
K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria ... 858 0.0
M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tube... 858 0.0
I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza gl... 856 0.0
I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypo... 854 0.0
K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine ... 854 0.0
I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypo... 854 0.0
K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine ... 853 0.0
I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine ... 853 0.0
M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica... 851 0.0
Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum ... 850 0.0
Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum... 849 0.0
Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum ... 847 0.0
Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays... 847 0.0
A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sa... 846 0.0
B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sa... 845 0.0
O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays... 845 0.0
J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) ... 845 0.0
C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum ... 843 0.0
M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rap... 832 0.0
Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sa... 828 0.0
K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum ... 806 0.0
Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) ... 794 0.0
B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chlorop... 791 0.0
Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomi... 775 0.0
Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomi... 774 0.0
A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomi... 770 0.0
Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomi... 768 0.0
A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomi... 767 0.0
Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomi... 766 0.0
A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sa... 758 0.0
M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloropl... 724 0.0
N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloropl... 716 0.0
B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus ... 711 0.0
N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcom... 705 0.0
A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomi... 703 0.0
B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor)... 698 0.0
D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) ... 698 0.0
G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago... 653 0.0
B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus ... 640 0.0
M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2, chloropl... 638 e-180
M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2, chloropl... 612 e-172
I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine ... 589 e-165
A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) ... 580 e-163
B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus... 575 e-161
M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum ... 519 e-144
D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleri... 476 e-131
K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoc... 467 e-129
A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreoco... 466 e-128
C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromon... 460 e-126
Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleri... 456 e-125
Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum... 451 e-124
Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment) ... 439 e-120
C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromon... 439 e-120
Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreoco... 437 e-119
D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polyspho... 436 e-119
F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyost... 428 e-117
I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus... 426 e-116
J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosp... 424 e-115
K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosp... 422 e-115
L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acantham... 422 e-115
Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptoco... 421 e-115
Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptoco... 420 e-114
Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptoco... 420 e-114
Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptoco... 420 e-114
F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptoco... 420 e-114
F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptoco... 420 e-114
Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptoco... 420 e-114
F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptoco... 419 e-114
Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptoco... 419 e-114
Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptoco... 419 e-114
F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptoco... 419 e-114
Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptoco... 419 e-114
G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia os... 419 e-114
J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptoco... 418 e-114
R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ich... 417 e-114
K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ... 415 e-113
Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptoco... 414 e-113
E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptoco... 414 e-113
F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo l... 414 e-112
R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squale... 413 e-112
J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibropor... 412 e-112
G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotor... 412 e-112
F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococ... 409 e-111
M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidio... 408 e-111
I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia... 408 e-111
D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizoph... 407 e-111
N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeri... 407 e-111
M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosp... 407 e-110
M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed ... 406 e-110
M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna... 405 e-110
G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryoti... 405 e-110
A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Scleroti... 405 e-110
F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyost... 405 e-110
L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizocto... 402 e-109
Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoe... 402 e-109
K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phaneroc... 399 e-108
F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula ... 399 e-108
H6BKV4_EXODN (tr|H6BKV4) DNA-directed RNA polymerase OS=Exophial... 399 e-108
F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula ... 399 e-108
D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniell... 397 e-107
R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma h... 397 e-107
Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago... 395 e-107
K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssoni... 395 e-107
E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisor... 395 e-107
M5BWD9_9HOMO (tr|M5BWD9) DNA-directed RNA polymerase, mitochondr... 394 e-106
G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobo... 394 e-106
D2JWV0_9TREE (tr|D2JWV0) DNA-directed RNA polymerase OS=Filobasi... 393 e-106
C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidio... 392 e-106
E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidio... 392 e-106
J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidio... 392 e-106
G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomi... 391 e-106
M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassez... 390 e-105
L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces... 389 e-105
Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) ... 389 e-105
M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis... 389 e-105
E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorell... 389 e-105
H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytopht... 389 e-105
A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassez... 388 e-105
G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavi... 387 e-105
F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagata... 386 e-104
C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagata... 386 e-104
D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytopht... 386 e-104
C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinoca... 384 e-104
I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago... 384 e-104
C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachance... 384 e-104
D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarp... 384 e-104
F4P6A9_BATDJ (tr|F4P6A9) Putative uncharacterized protein OS=Bat... 384 e-103
C0RZR9_PARBP (tr|C0RZR9) DNA-directed RNA polymerase OS=Paracocc... 382 e-103
Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyost... 382 e-103
R7YGD8_9EURO (tr|R7YGD8) Uncharacterized protein OS=Coniosporium... 382 e-103
C1G892_PARBD (tr|C1G892) DNA-directed RNA polymerase OS=Paracocc... 380 e-102
B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodac... 380 e-102
H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachst... 379 e-102
G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavi... 379 e-102
A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharo... 378 e-102
N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.... 378 e-102
G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharo... 378 e-102
Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya g... 378 e-102
M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=F... 378 e-102
C1GZG1_PARBA (tr|C1GZG1) DNA-directed RNA polymerase OS=Paracocc... 378 e-102
C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharo... 378 e-102
C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharo... 378 e-102
B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharo... 378 e-102
F0UNN0_AJEC8 (tr|F0UNN0) DNA-directed RNA polymerase OS=Ajellomy... 378 e-102
G4UJT0_NEUT9 (tr|G4UJT0) DNA-directed RNA polymerase OS=Neurospo... 378 e-102
F8MFL5_NEUT8 (tr|F8MFL5) DNA-directed RNA polymerase OS=Neurospo... 378 e-102
E7R4S0_PICAD (tr|E7R4S0) DNA-directed RNA polymerase OS=Pichia a... 377 e-102
H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharo... 377 e-102
B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) ... 377 e-101
G9MXM1_HYPVG (tr|G9MXM1) DNA-directed RNA polymerase OS=Hypocrea... 377 e-101
C6HMP3_AJECH (tr|C6HMP3) DNA-directed RNA polymerase OS=Ajellomy... 377 e-101
C0NPG4_AJECG (tr|C0NPG4) DNA-directed RNA polymerase OS=Ajellomy... 377 e-101
Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyvero... 376 e-101
M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceripori... 376 e-101
A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomy... 375 e-101
A8NIS4_COPC7 (tr|A8NIS4) DNA-directed RNA polymerase OS=Coprinop... 374 e-101
Q2H1K6_CHAGB (tr|Q2H1K6) DNA-directed RNA polymerase OS=Chaetomi... 374 e-101
G2XCS8_VERDV (tr|G2XCS8) DNA-directed RNA polymerase OS=Verticil... 374 e-101
L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletot... 374 e-101
D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber me... 374 e-101
N1QDP6_9PEZI (tr|N1QDP6) DNA/RNA polymerase OS=Mycosphaerella po... 374 e-100
F7VNT9_SORMK (tr|F7VNT9) DNA-directed RNA polymerase OS=Sordaria... 374 e-100
L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillard... 374 e-100
M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna... 373 e-100
A3LX46_PICST (tr|A3LX46) DNA-directed RNA polymerase OS=Scheffer... 373 e-100
H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharo... 373 e-100
G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia s... 372 e-100
R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna... 372 e-100
C5JUP7_AJEDS (tr|C5JUP7) DNA-directed RNA polymerase OS=Ajellomy... 372 e-100
C5GMV9_AJEDR (tr|C5GMV9) DNA-directed RNA polymerase OS=Ajellomy... 372 e-100
K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus... 372 e-100
F2TG61_AJEDA (tr|F2TG61) DNA-directed RNA polymerase OS=Ajellomy... 372 e-100
E9EDA9_METAQ (tr|E9EDA9) DNA-directed RNA polymerase OS=Metarhiz... 372 e-100
K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus... 372 e-100
C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthrode... 372 e-100
M1W4C2_CLAPU (tr|M1W4C2) DNA-directed RNA polymerase OS=Clavicep... 372 e-100
N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletot... 371 e-100
E3QMB6_COLGM (tr|E3QMB6) DNA-directed RNA polymerase OS=Colletot... 371 e-100
Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family pro... 371 e-100
Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida ... 371 e-100
G8BS54_TETPH (tr|G8BS54) DNA-directed RNA polymerase OS=Tetrapis... 370 1e-99
J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharo... 370 1e-99
M2MY29_9PEZI (tr|M2MY29) DNA-directed RNA polymerase OS=Baudoini... 370 1e-99
B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosa... 369 2e-99
H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletot... 369 3e-99
M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (... 369 3e-99
E9EXQ5_METAR (tr|E9EXQ5) DNA-directed RNA polymerase OS=Metarhiz... 369 4e-99
G0RQ42_HYPJQ (tr|G0RQ42) DNA-directed RNA polymerase OS=Hypocrea... 369 4e-99
F9XJE6_MYCGM (tr|F9XJE6) DNA-directed RNA polymerase OS=Mycospha... 369 4e-99
M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphopho... 368 6e-99
I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapis... 367 1e-98
Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) ... 367 1e-98
K9G2U3_PEND2 (tr|K9G2U3) DNA-directed RNA polymerase OS=Penicill... 367 1e-98
K9F8K1_PEND1 (tr|K9F8K1) DNA-directed RNA polymerase OS=Penicill... 367 1e-98
Q5AVS1_EMENI (tr|Q5AVS1) DNA-directed RNA polymerase OS=Emericel... 367 1e-98
I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyx... 367 1e-98
E4UVQ3_ARTGP (tr|E4UVQ3) DNA-directed RNA polymerase OS=Arthrode... 367 1e-98
N1PGJ0_MYCPJ (tr|N1PGJ0) Uncharacterized protein OS=Dothistroma ... 367 1e-98
C5DX79_ZYGRC (tr|C5DX79) DNA-directed RNA polymerase OS=Zygosacc... 366 2e-98
G9NT70_HYPAI (tr|G9NT70) DNA-directed RNA polymerase OS=Hypocrea... 366 2e-98
J7S7Y3_KAZNA (tr|J7S7Y3) DNA-directed RNA polymerase OS=Kazachst... 366 2e-98
K0KTX3_WICCF (tr|K0KTX3) DNA-directed RNA polymerase OS=Wickerha... 366 2e-98
B2ANR4_PODAN (tr|B2ANR4) DNA-directed RNA polymerase OS=Podospor... 365 5e-98
J4UIN0_BEAB2 (tr|J4UIN0) DNA-directed RNA polymerase OS=Beauveri... 365 6e-98
D4DH48_TRIVH (tr|D4DH48) DNA-directed RNA polymerase OS=Trichoph... 364 9e-98
Q9PTG7_XENLA (tr|Q9PTG7) DNA-directed RNA polymerase (Precursor)... 364 1e-97
M3IK19_CANMA (tr|M3IK19) DNA-directed RNA polymerase OS=Candida ... 364 1e-97
G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulasp... 364 1e-97
H8X1L6_CANO9 (tr|H8X1L6) DNA-directed RNA polymerase OS=Candida ... 363 1e-97
D4B1W3_ARTBC (tr|D4B1W3) DNA-directed RNA polymerase OS=Arthrode... 363 1e-97
G4NFN6_MAGO7 (tr|G4NFN6) DNA-directed RNA polymerase OS=Magnapor... 363 1e-97
F2RVR6_TRIT1 (tr|F2RVR6) DNA-directed RNA polymerase OS=Trichoph... 363 1e-97
F2Q2T9_TRIEC (tr|F2Q2T9) DNA-directed RNA polymerase OS=Trichoph... 363 1e-97
B9N9Q4_POPTR (tr|B9N9Q4) Predicted protein OS=Populus trichocarp... 363 2e-97
L7JAR4_MAGOR (tr|L7JAR4) DNA-directed RNA polymerase OS=Magnapor... 363 2e-97
L7IDF0_MAGOR (tr|L7IDF0) DNA-directed RNA polymerase OS=Magnapor... 363 2e-97
F2SGD5_TRIRC (tr|F2SGD5) DNA-directed RNA polymerase OS=Trichoph... 363 2e-97
G3B4C1_CANTC (tr|G3B4C1) DNA-directed RNA polymerase OS=Candida ... 363 2e-97
F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis fa... 363 2e-97
G0QLN6_ICHMG (tr|G0QLN6) Putative uncharacterized protein OS=Ich... 363 2e-97
J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis fa... 362 3e-97
G1PD86_MYOLU (tr|G1PD86) DNA-directed RNA polymerase OS=Myotis l... 362 3e-97
L5LSH4_MYODS (tr|L5LSH4) DNA-directed RNA polymerase OS=Myotis d... 362 4e-97
F6RR66_XENTR (tr|F6RR66) DNA-directed RNA polymerase OS=Xenopus ... 362 5e-97
H2LHG2_ORYLA (tr|H2LHG2) DNA-directed RNA polymerase (Fragment) ... 361 6e-97
J3P6J0_GAGT3 (tr|J3P6J0) DNA-directed RNA polymerase OS=Gaeumann... 361 6e-97
F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelp... 361 7e-97
C5ME71_CANTT (tr|C5ME71) DNA-directed RNA polymerase OS=Candida ... 361 7e-97
G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovoz... 361 8e-97
R8BT27_9PEZI (tr|R8BT27) Putative dna-directed rna polymerase pr... 361 8e-97
A2R5W5_ASPNC (tr|A2R5W5) DNA-directed RNA polymerase OS=Aspergil... 361 9e-97
B6HKC8_PENCW (tr|B6HKC8) DNA-directed RNA polymerase OS=Penicill... 361 9e-97
G3XYH4_ASPNA (tr|G3XYH4) DNA-directed RNA polymerase OS=Aspergil... 360 1e-96
J9N1Y6_FUSO4 (tr|J9N1Y6) DNA-directed RNA polymerase OS=Fusarium... 360 1e-96
F9F6M8_FUSOF (tr|F9F6M8) DNA-directed RNA polymerase OS=Fusarium... 360 1e-96
N1RVU8_FUSOX (tr|N1RVU8) DNA-directed RNA polymerase, mitochondr... 360 1e-96
N4UNZ4_FUSOX (tr|N4UNZ4) DNA-directed RNA polymerase, mitochondr... 360 1e-96
K2RJP7_MACPH (tr|K2RJP7) DNA-directed RNA polymerase OS=Macropho... 360 2e-96
G3JSG1_CORMM (tr|G3JSG1) DNA-directed RNA polymerase OS=Cordycep... 360 2e-96
G7XU63_ASPKW (tr|G7XU63) DNA-directed RNA polymerase OS=Aspergil... 360 2e-96
G0VD01_NAUCC (tr|G0VD01) DNA-directed RNA polymerase OS=Naumovoz... 360 2e-96
B6Q8C3_PENMQ (tr|B6Q8C3) DNA-directed RNA polymerase OS=Penicill... 358 5e-96
D8LUV8_BLAHO (tr|D8LUV8) DNA-directed RNA polymerase OS=Blastocy... 358 5e-96
M3AMX9_9PEZI (tr|M3AMX9) DNA-directed RNA polymerase OS=Pseudoce... 358 5e-96
K9IP16_DESRO (tr|K9IP16) DNA-directed RNA polymerase OS=Desmodus... 358 6e-96
B8MRF0_TALSN (tr|B8MRF0) DNA-directed RNA polymerase OS=Talaromy... 357 1e-95
G3AEY0_SPAPN (tr|G3AEY0) Putative uncharacterized protein OS=Spa... 357 1e-95
F4S3X3_MELLP (tr|F4S3X3) DNA-directed RNA polymerase OS=Melampso... 357 2e-95
Q2UD92_ASPOR (tr|Q2UD92) DNA-directed RNA polymerase OS=Aspergil... 356 2e-95
I8TNX0_ASPO3 (tr|I8TNX0) DNA-directed RNA polymerase OS=Aspergil... 356 2e-95
B8N6M7_ASPFN (tr|B8N6M7) DNA-directed RNA polymerase OS=Aspergil... 356 2e-95
H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur... 356 2e-95
C7YY77_NECH7 (tr|C7YY77) DNA-directed RNA polymerase OS=Nectria ... 356 2e-95
K6ZBI1_PANTR (tr|K6ZBI1) DNA-directed RNA polymerase OS=Pan trog... 356 2e-95
G8JMS2_ERECY (tr|G8JMS2) DNA-directed RNA polymerase OS=Eremothe... 356 2e-95
Q59E91_HUMAN (tr|Q59E91) DNA-directed RNA polymerase (Fragment) ... 356 3e-95
Q4G0F4_HUMAN (tr|Q4G0F4) DNA-directed RNA polymerase OS=Homo sap... 355 3e-95
A0CCN6_PARTE (tr|A0CCN6) Chromosome undetermined scaffold_168, w... 355 4e-95
K7EKS3_HUMAN (tr|K7EKS3) DNA-directed RNA polymerase OS=Homo sap... 355 4e-95
I3J2B8_ORENI (tr|I3J2B8) DNA-directed RNA polymerase (Fragment) ... 355 4e-95
I3J2B7_ORENI (tr|I3J2B7) DNA-directed RNA polymerase OS=Oreochro... 355 5e-95
G3W635_SARHA (tr|G3W635) DNA-directed RNA polymerase (Fragment) ... 354 7e-95
M2X4M7_GALSU (tr|M2X4M7) DNA-directed RNA polymerase OS=Galdieri... 354 7e-95
B5RTF6_DEBHA (tr|B5RTF6) DNA-directed RNA polymerase OS=Debaryom... 354 9e-95
B7GAR6_PHATC (tr|B7GAR6) DNA-directed RNA polymerase OS=Phaeodac... 354 1e-94
I3M2A6_SPETR (tr|I3M2A6) DNA-directed RNA polymerase OS=Spermoph... 353 2e-94
D3ZYB6_RAT (tr|D3ZYB6) DNA-directed RNA polymerase OS=Rattus nor... 353 2e-94
F0X893_GROCL (tr|F0X893) DNA-directed RNA polymerase OS=Grosmann... 353 3e-94
I2CX83_MACMU (tr|I2CX83) DNA-directed RNA polymerase OS=Macaca m... 352 3e-94
G1QJ40_NOMLE (tr|G1QJ40) DNA-directed RNA polymerase OS=Nomascus... 352 4e-94
G3PHQ7_GASAC (tr|G3PHQ7) DNA-directed RNA polymerase (Fragment) ... 351 6e-94
M3YES8_MUSPF (tr|M3YES8) DNA-directed RNA polymerase OS=Mustela ... 351 6e-94
A5DVV6_LODEL (tr|A5DVV6) DNA-directed RNA polymerase OS=Lodderom... 350 2e-93
Q0CV53_ASPTN (tr|Q0CV53) DNA-directed RNA polymerase OS=Aspergil... 350 2e-93
G3SPD8_LOXAF (tr|G3SPD8) DNA-directed RNA polymerase (Fragment) ... 349 2e-93
J3QFB0_PUCT1 (tr|J3QFB0) DNA-directed RNA polymerase OS=Puccinia... 349 3e-93
G8B7X1_CANPC (tr|G8B7X1) DNA-directed RNA polymerase OS=Candida ... 349 3e-93
C3Y2C4_BRAFL (tr|C3Y2C4) DNA-directed RNA polymerase OS=Branchio... 349 4e-93
H3CZ72_TETNG (tr|H3CZ72) DNA-directed RNA polymerase (Fragment) ... 348 7e-93
Q4SDA8_TETNG (tr|Q4SDA8) DNA-directed RNA polymerase (Fragment) ... 348 7e-93
H3CZ71_TETNG (tr|H3CZ71) DNA-directed RNA polymerase (Fragment) ... 348 8e-93
H2RFP7_PANTR (tr|H2RFP7) DNA-directed RNA polymerase (Fragment) ... 347 9e-93
B8BVD8_THAPS (tr|B8BVD8) DNA-directed RNA polymerase OS=Thalassi... 347 1e-92
E1BCZ0_BOVIN (tr|E1BCZ0) DNA-directed RNA polymerase OS=Bos taur... 347 1e-92
H2VAF8_TAKRU (tr|H2VAF8) DNA-directed RNA polymerase (Fragment) ... 347 2e-92
R7VVF1_COLLI (tr|R7VVF1) DNA-directed RNA polymerase, mitochondr... 347 2e-92
H2VAF7_TAKRU (tr|H2VAF7) DNA-directed RNA polymerase (Fragment) ... 346 2e-92
H2VAF5_TAKRU (tr|H2VAF5) DNA-directed RNA polymerase (Fragment) ... 346 2e-92
G1L7Q8_AILME (tr|G1L7Q8) DNA-directed RNA polymerase OS=Ailuropo... 346 2e-92
D2HMC2_AILME (tr|D2HMC2) DNA-directed RNA polymerase (Fragment) ... 346 2e-92
G5C5W3_HETGA (tr|G5C5W3) DNA-directed RNA polymerase OS=Heteroce... 346 2e-92
H2VAF6_TAKRU (tr|H2VAF6) DNA-directed RNA polymerase (Fragment) ... 346 2e-92
H2VAF9_TAKRU (tr|H2VAF9) DNA-directed RNA polymerase (Fragment) ... 346 3e-92
F1Q5F7_DANRE (tr|F1Q5F7) DNA-directed RNA polymerase OS=Danio re... 345 3e-92
H3ATV4_LATCH (tr|H3ATV4) DNA-directed RNA polymerase (Fragment) ... 344 7e-92
E1BZ13_CHICK (tr|E1BZ13) DNA-directed RNA polymerase OS=Gallus g... 344 9e-92
Q0U2N8_PHANO (tr|Q0U2N8) DNA-directed RNA polymerase OS=Phaeosph... 343 2e-91
L0PGB8_PNEJ8 (tr|L0PGB8) DNA-directed RNA polymerase (Fragment) ... 343 2e-91
Q6CH64_YARLI (tr|Q6CH64) DNA-directed RNA polymerase OS=Yarrowia... 343 2e-91
E3KKR4_PUCGT (tr|E3KKR4) DNA-directed RNA polymerase OS=Puccinia... 343 2e-91
G1MW79_MELGA (tr|G1MW79) DNA-directed RNA polymerase (Fragment) ... 343 2e-91
A1C7P8_ASPCL (tr|A1C7P8) DNA-directed RNA polymerase OS=Aspergil... 342 3e-91
Q3U3J3_MOUSE (tr|Q3U3J3) DNA-directed RNA polymerase OS=Mus musc... 342 4e-91
Q3V3C0_MOUSE (tr|Q3V3C0) DNA-directed RNA polymerase (Fragment) ... 342 5e-91
B2WGL2_PYRTR (tr|B2WGL2) DNA-directed RNA polymerase OS=Pyrenoph... 342 6e-91
M3V845_PIG (tr|M3V845) DNA-directed RNA polymerase OS=Sus scrofa... 341 7e-91
K3W0W7_FUSPC (tr|K3W0W7) DNA-directed RNA polymerase OS=Fusarium... 340 1e-90
E3RGN3_PYRTT (tr|E3RGN3) DNA-directed RNA polymerase OS=Pyrenoph... 340 1e-90
D6WV41_TRICA (tr|D6WV41) DNA-directed RNA polymerase OS=Triboliu... 340 2e-90
A5DN82_PICGU (tr|A5DN82) DNA-directed RNA polymerase OS=Meyerozy... 339 3e-90
E9PWD9_MOUSE (tr|E9PWD9) DNA-directed RNA polymerase OS=Mus musc... 339 4e-90
G4TLX8_PIRID (tr|G4TLX8) Related to RPO41-DNA-directed RNA polym... 338 4e-90
F7GCL4_CALJA (tr|F7GCL4) DNA-directed RNA polymerase (Fragment) ... 338 5e-90
G4Z814_PHYSP (tr|G4Z814) DNA-directed RNA polymerase OS=Phytopht... 338 5e-90
A1DIB9_NEOFI (tr|A1DIB9) DNA-directed RNA polymerase OS=Neosarto... 338 6e-90
R0IQ82_SETTU (tr|R0IQ82) Uncharacterized protein OS=Setosphaeria... 338 7e-90
N4XC35_COCHE (tr|N4XC35) Uncharacterized protein OS=Bipolaris ma... 338 8e-90
M2TI11_COCHE (tr|M2TI11) DNA-directed RNA polymerase OS=Bipolari... 338 8e-90
Q4WZV7_ASPFU (tr|Q4WZV7) DNA-directed RNA polymerase OS=Neosarto... 337 9e-90
B0XUL0_ASPFC (tr|B0XUL0) DNA-directed RNA polymerase OS=Neosarto... 337 9e-90
B9W6L5_CANDC (tr|B9W6L5) DNA-directed RNA polymerase OS=Candida ... 337 9e-90
G3HF40_CRIGR (tr|G3HF40) DNA-directed RNA polymerase OS=Cricetul... 337 2e-89
R4XD37_9ASCO (tr|R4XD37) DNA-directed RNA polymerase OS=Taphrina... 336 2e-89
H0YQS8_TAEGU (tr|H0YQS8) DNA-directed RNA polymerase (Fragment) ... 336 3e-89
B3RXA6_TRIAD (tr|B3RXA6) DNA-directed RNA polymerase (Fragment) ... 336 3e-89
G9HRK4_9SPIT (tr|G9HRK4) DNA-dependent RNA polymerase family pro... 335 6e-89
Q0QFS3_9MYCE (tr|Q0QFS3) DNA-directed RNA polymerase (Fragment) ... 335 6e-89
G7LG77_MEDTR (tr|G7LG77) DNA-directed RNA polymerase OS=Medicago... 334 9e-89
I1FB80_AMPQE (tr|I1FB80) Uncharacterized protein OS=Amphimedon q... 334 1e-88
C4Y8E3_CLAL4 (tr|C4Y8E3) DNA-directed RNA polymerase OS=Clavispo... 333 1e-88
M2TMC0_COCSA (tr|M2TMC0) DNA-directed RNA polymerase OS=Bipolari... 333 2e-88
E4ZQ41_LEPMJ (tr|E4ZQ41) DNA-directed RNA polymerase OS=Leptosph... 331 7e-88
H0VY05_CAVPO (tr|H0VY05) DNA-directed RNA polymerase OS=Cavia po... 331 1e-87
E9J4Y7_SOLIN (tr|E9J4Y7) DNA-directed RNA polymerase (Fragment) ... 330 1e-87
F7GNJ0_MACMU (tr|F7GNJ0) DNA-directed RNA polymerase OS=Macaca m... 330 1e-87
A9V1Q0_MONBE (tr|A9V1Q0) DNA-directed RNA polymerase OS=Monosiga... 327 1e-86
H9I8M0_ATTCE (tr|H9I8M0) DNA-directed RNA polymerase OS=Atta cep... 327 2e-86
A5JEF2_PARLI (tr|A5JEF2) DNA-directed RNA polymerase OS=Paracent... 327 2e-86
C4YFJ1_CANAW (tr|C4YFJ1) DNA-directed RNA polymerase OS=Candida ... 326 3e-86
Q5ABC9_CANAL (tr|Q5ABC9) DNA-directed RNA polymerase OS=Candida ... 326 3e-86
E1ZV06_CAMFO (tr|E1ZV06) DNA-directed RNA polymerase OS=Camponot... 325 6e-86
F4WHT1_ACREC (tr|F4WHT1) DNA-directed RNA polymerase OS=Acromyrm... 324 1e-85
F2U5G9_SALS5 (tr|F2U5G9) DNA-directed RNA polymerase OS=Salpingo... 324 1e-85
Q17K00_AEDAE (tr|Q17K00) DNA-directed RNA polymerase OS=Aedes ae... 320 1e-84
Q16EA9_AEDAE (tr|Q16EA9) DNA-directed RNA polymerase OS=Aedes ae... 319 3e-84
A7S3D0_NEMVE (tr|A7S3D0) DNA-directed RNA polymerase (Fragment) ... 318 6e-84
J9K183_ACYPI (tr|J9K183) DNA-directed RNA polymerase OS=Acyrthos... 317 9e-84
Q2PZ35_TIGCA (tr|Q2PZ35) DNA-directed RNA polymerase (Fragment) ... 317 2e-83
Q2PZ34_TIGCA (tr|Q2PZ34) DNA-directed RNA polymerase (Fragment) ... 317 2e-83
B3MN87_DROAN (tr|B3MN87) DNA-directed RNA polymerase OS=Drosophi... 317 2e-83
Q2PZ45_TIGCA (tr|Q2PZ45) DNA-directed RNA polymerase OS=Tigriopu... 317 2e-83
Q2PZ38_TIGCA (tr|Q2PZ38) DNA-directed RNA polymerase OS=Tigriopu... 316 2e-83
G9KHU0_MUSPF (tr|G9KHU0) DNA-directed RNA polymerase (Fragment) ... 316 3e-83
Q2PZ44_TIGCA (tr|Q2PZ44) DNA-directed RNA polymerase OS=Tigriopu... 315 4e-83
Q2PZ42_TIGCA (tr|Q2PZ42) DNA-directed RNA polymerase OS=Tigriopu... 315 6e-83
Q2PZ39_TIGCA (tr|Q2PZ39) DNA-directed RNA polymerase OS=Tigriopu... 314 1e-82
Q2PZ36_TIGCA (tr|Q2PZ36) DNA-directed RNA polymerase (Fragment) ... 314 1e-82
Q2PZ43_TIGCA (tr|Q2PZ43) DNA-directed RNA polymerase OS=Tigriopu... 314 1e-82
Q2PZ37_TIGCA (tr|Q2PZ37) DNA-directed RNA polymerase OS=Tigriopu... 314 1e-82
M4QNP6_TIGCA (tr|M4QNP6) Mitochondrial RNA polymerase (Fragment)... 313 1e-82
A5BB83_VITVI (tr|A5BB83) Putative uncharacterized protein OS=Vit... 313 2e-82
Q2PZ40_TIGCA (tr|Q2PZ40) DNA-directed RNA polymerase (Fragment) ... 313 2e-82
F1KUB3_ASCSU (tr|F1KUB3) DNA-directed RNA polymerase OS=Ascaris ... 313 2e-82
B4Q6M5_DROSI (tr|B4Q6M5) DNA-directed RNA polymerase OS=Drosophi... 313 2e-82
Q9VPW4_DROME (tr|Q9VPW4) DNA-directed RNA polymerase OS=Drosophi... 313 2e-82
B4LUB0_DROVI (tr|B4LUB0) DNA-directed RNA polymerase OS=Drosophi... 313 2e-82
B4MZP1_DROWI (tr|B4MZP1) DNA-directed RNA polymerase OS=Drosophi... 313 3e-82
Q2PZ46_TIGCA (tr|Q2PZ46) DNA-directed RNA polymerase (Fragment) ... 313 3e-82
B3N8B5_DROER (tr|B3N8B5) DNA-directed RNA polymerase OS=Drosophi... 312 5e-82
B4KET7_DROMO (tr|B4KET7) DNA-directed RNA polymerase OS=Drosophi... 311 7e-82
B4P304_DROYA (tr|B4P304) DNA-directed RNA polymerase OS=Drosophi... 311 8e-82
Q2PZ41_TIGCA (tr|Q2PZ41) DNA-directed RNA polymerase OS=Tigriopu... 310 1e-81
B4ID50_DROSE (tr|B4ID50) DNA-directed RNA polymerase OS=Drosophi... 310 2e-81
B4JQF3_DROGR (tr|B4JQF3) DNA-directed RNA polymerase OS=Drosophi... 309 3e-81
R7QN31_CHOCR (tr|R7QN31) Stackhouse genomic scaffold, scaffold_4... 309 4e-81
Q29LI1_DROPS (tr|Q29LI1) DNA-directed RNA polymerase OS=Drosophi... 308 6e-81
B0W1Q8_CULQU (tr|B0W1Q8) DNA-directed RNA polymerase OS=Culex qu... 308 8e-81
E9CAC7_CAPO3 (tr|E9CAC7) DNA-directed RNA polymerase OS=Capsaspo... 307 1e-80
L5L765_PTEAL (tr|L5L765) DNA-directed RNA polymerase OS=Pteropus... 307 2e-80
E9GF52_DAPPU (tr|E9GF52) DNA-directed RNA polymerase OS=Daphnia ... 306 3e-80
L8XZH8_TUPCH (tr|L8XZH8) DNA-directed RNA polymerase OS=Tupaia c... 305 5e-80
M4BTL5_HYAAE (tr|M4BTL5) Uncharacterized protein OS=Hyaloperonos... 304 9e-80
E1GB82_LOALO (tr|E1GB82) DNA-directed RNA polymerase OS=Loa loa ... 302 5e-79
A8PG00_BRUMA (tr|A8PG00) DNA-directed RNA polymerase OS=Brugia m... 301 7e-79
E0VGQ8_PEDHC (tr|E0VGQ8) DNA-directed RNA polymerase OS=Pediculu... 301 8e-79
C5KD29_PERM5 (tr|C5KD29) Putative uncharacterized protein OS=Per... 298 9e-78
M3WNJ2_FELCA (tr|M3WNJ2) DNA-directed RNA polymerase (Fragment) ... 297 1e-77
K1R5B9_CRAGI (tr|K1R5B9) DNA-directed RNA polymerase, mitochondr... 296 2e-77
M4CWT4_BRARP (tr|M4CWT4) Uncharacterized protein OS=Brassica rap... 296 2e-77
N6T6B1_9CUCU (tr|N6T6B1) Uncharacterized protein (Fragment) OS=D... 296 3e-77
B9N6S4_POPTR (tr|B9N6S4) Predicted protein OS=Populus trichocarp... 293 2e-76
G7YI53_CLOSI (tr|G7YI53) DNA-directed RNA polymerase OS=Clonorch... 292 5e-76
K7JB20_NASVI (tr|K7JB20) DNA-directed RNA polymerase OS=Nasonia ... 289 4e-75
C9S6U0_VERA1 (tr|C9S6U0) DNA-directed RNA polymerase OS=Verticil... 288 7e-75
E2B480_HARSA (tr|E2B480) DNA-directed RNA polymerase OS=Harpegna... 285 5e-74
H2QES6_PANTR (tr|H2QES6) Uncharacterized protein OS=Pan troglody... 285 8e-74
Q9D196_MOUSE (tr|Q9D196) DNA-directed RNA polymerase (Fragment) ... 284 1e-73
H2Y632_CIOSA (tr|H2Y632) DNA-directed RNA polymerase (Fragment) ... 281 9e-73
G7LG78_MEDTR (tr|G7LG78) DNA-directed RNA polymerase OS=Medicago... 280 2e-72
F0VQ85_NEOCL (tr|F0VQ85) DNA-directed RNA polymerase OS=Neospora... 280 3e-72
B4FGZ4_MAIZE (tr|B4FGZ4) DNA-directed RNA polymerase OS=Zea mays... 280 3e-72
K7N813_HETTR (tr|K7N813) DNA-directed RNA polymerase OS=Heteroca... 279 4e-72
E3N1N7_CAERE (tr|E3N1N7) DNA-directed RNA polymerase OS=Caenorha... 278 7e-72
L7LYM7_9ACAR (tr|L7LYM7) DNA-directed RNA polymerase OS=Rhipicep... 276 4e-71
A8XWB1_CAEBR (tr|A8XWB1) DNA-directed RNA polymerase OS=Caenorha... 276 4e-71
M3GE26_STEMA (tr|M3GE26) DNA-directed RNA polymerase OS=Stenotro... 275 7e-71
H2WBN7_CAEJA (tr|H2WBN7) DNA-directed RNA polymerase OS=Caenorha... 273 2e-70
Q4Z4B5_PLABA (tr|Q4Z4B5) DNA-directed RNA polymerase (Fragment) ... 273 2e-70
E5SG31_TRISP (tr|E5SG31) DNA-directed RNA polymerase OS=Trichine... 273 2e-70
A7T5U5_NEMVE (tr|A7T5U5) DNA-directed RNA polymerase OS=Nematost... 273 3e-70
Q8WQA3_CAEEL (tr|Q8WQA3) DNA-directed RNA polymerase OS=Caenorha... 272 4e-70
M5CVP8_STEMA (tr|M5CVP8) DNA-directed RNA polymerase OS=Stenotro... 272 4e-70
R7VAU6_9ANNE (tr|R7VAU6) Uncharacterized protein OS=Capitella te... 270 2e-69
B6KGP1_TOXGO (tr|B6KGP1) DNA-directed RNA polymerase OS=Toxoplas... 270 2e-69
B9PQ14_TOXGO (tr|B9PQ14) DNA-directed RNA polymerase OS=Toxoplas... 270 2e-69
Q4XV65_PLACH (tr|Q4XV65) DNA-directed RNA polymerase (Fragment) ... 270 2e-69
A5PEY3_CAEEL (tr|A5PEY3) DNA-directed RNA polymerase OS=Caenorha... 266 3e-68
I7ISY9_BABMI (tr|I7ISY9) DNA-directed RNA polymerase OS=Babesia ... 266 3e-68
Q7RAE1_PLAYO (tr|Q7RAE1) DNA-directed RNA polymerase OS=Plasmodi... 266 3e-68
Q4UIH0_THEAN (tr|Q4UIH0) DNA-directed RNA polymerase OS=Theileri... 265 9e-68
A7AMS9_BABBO (tr|A7AMS9) DNA-directed RNA polymerase OS=Babesia ... 264 1e-67
Q6BKS8_DEBHA (tr|Q6BKS8) DNA-directed RNA polymerase OS=Debaryom... 263 2e-67
B3L558_PLAKH (tr|B3L558) DNA-directed RNA polymerase OS=Plasmodi... 263 3e-67
Q4N745_THEPA (tr|Q4N745) DNA-directed RNA polymerase OS=Theileri... 262 5e-67
B9T5S7_RICCO (tr|B9T5S7) Putative uncharacterized protein OS=Ric... 261 7e-67
L1LFT7_BABEQ (tr|L1LFT7) DNA-directed RNA polymerase OS=Babesia ... 261 1e-66
A5K4R4_PLAVS (tr|A5K4R4) DNA-directed RNA polymerase OS=Plasmodi... 260 1e-66
A3LWB9_PICST (tr|A3LWB9) DNA-directed RNA polymerase (Fragment) ... 259 3e-66
Q0QFS0_9EUKA (tr|Q0QFS0) DNA-directed RNA polymerase (Fragment) ... 259 5e-66
G0MJN3_CAEBE (tr|G0MJN3) DNA-directed RNA polymerase OS=Caenorha... 258 8e-66
G3SEZ7_GORGO (tr|G3SEZ7) DNA-directed RNA polymerase (Fragment) ... 253 2e-64
G4V993_SCHMA (tr|G4V993) DNA-directed RNA polymerase OS=Schistos... 253 2e-64
C4Y592_CLAL4 (tr|C4Y592) DNA-directed RNA polymerase OS=Clavispo... 253 3e-64
H9JHD2_BOMMO (tr|H9JHD2) Uncharacterized protein OS=Bombyx mori ... 253 3e-64
Q0QFR9_9EUKA (tr|Q0QFR9) DNA-directed RNA polymerase (Fragment) ... 252 4e-64
A5DAF4_PICGU (tr|A5DAF4) DNA-directed RNA polymerase OS=Meyerozy... 250 2e-63
G8YHR0_PICSO (tr|G8YHR0) DNA-directed RNA polymerase OS=Pichia s... 246 2e-62
K6UTD6_9APIC (tr|K6UTD6) DNA-directed RNA polymerase OS=Plasmodi... 244 1e-61
J4C7R0_THEOR (tr|J4C7R0) DNA-directed RNA polymerase OS=Theileri... 243 2e-61
Q9GZ07_PLAFA (tr|Q9GZ07) DNA-directed RNA polymerase OS=Plasmodi... 243 3e-61
A5B3H8_VITVI (tr|A5B3H8) Putative uncharacterized protein OS=Vit... 243 3e-61
Q8IIB0_PLAF7 (tr|Q8IIB0) DNA-directed RNA polymerase OS=Plasmodi... 243 3e-61
>K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 812
Score = 1183 bits (3060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/853 (69%), Positives = 664/853 (77%), Gaps = 50/853 (5%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLGFNQVGAF 60
MWTN+ KR SS P F + + GF +VG
Sbjct: 1 MWTNLAKRASSTLRNNFRVSSLS----------PRF------CKPQTCKTFQGFPEVG-- 42
Query: 61 TSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEYDYSASXX 120
+ +SKF+ F + L RG+ASVAEAIES+D E DY
Sbjct: 43 -----VSQSKFV-----FHEGFSCSSSWSWSWMVLGRGHASVAEAIESTDTEDDYDEVQK 92
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLE 180
+SYKYK+LK+RQI+ ETEAW +AAREY ELLE
Sbjct: 93 LLEEMAKAEHKVDS--------------SSYKYKLLKRRQIESETEAWAEAAREYGELLE 138
Query: 181 DMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVI 240
DMR +KLAPNLPYMKSLFLGWFEPLRNAI+A+Q+LCKD++ R++H PYFN+LPADMMAV+
Sbjct: 139 DMRDKKLAPNLPYMKSLFLGWFEPLRNAILADQDLCKDSKCRMSHAPYFNDLPADMMAVV 198
Query: 241 TMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESD 300
TMHKLM LLMTN NGVG+A+V+Q A QIGEA+E+EARIY+FM++ K+ S
Sbjct: 199 TMHKLMALLMTNANGVGTARVIQAACQIGEAVENEARIYQFMKREKENKS--------SH 250
Query: 301 LAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVK 360
LAPV++ QK QA+GI+ +DDWK WGQEAQVK
Sbjct: 251 LAPVEQSGKLTEENGEMEQKQSRLRKRVAGLMKKQKKLQAMGIIGRQDDWKTWGQEAQVK 310
Query: 361 VGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLV 420
VGS LMQLLI+TAYIQPP NQIGDGPPDI PAF+HTL+ +S +SQ ++RYGVIECD LV
Sbjct: 311 VGSRLMQLLIETAYIQPPTNQIGDGPPDIHPAFRHTLRTLSNESQRETRRYGVIECDPLV 370
Query: 421 QQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ 480
Q GLEKSARHMVIPYMPMLVPP NWTGYDKGAYLFLPSYVMR+HGAKQQR+AVKRAP +Q
Sbjct: 371 QNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQ 430
Query: 481 LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIR 540
L+PVFEALNTLG+TKWRVNKRVL VIDQIWA GG LADLVDR++VP P+E DT DEAEIR
Sbjct: 431 LDPVFEALNTLGNTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPSPKEPDTIDEAEIR 490
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
KWKW VK V+KEN+ERHSQRCDIELKLAVARKMKDE+ FYYPHNLDFRGRAYPMHPYLNH
Sbjct: 491 KWKWKVKAVKKENSERHSQRCDIELKLAVARKMKDEEAFYYPHNLDFRGRAYPMHPYLNH 550
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
LGSDLCRGILEF EGR LGKSGL WLKIHLANLYAGGVDKL YDGRI+FTENHLDDIFDS
Sbjct: 551 LGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDS 610
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A++PLEGK WWL+AEDPFQCLAACINL+EALRSPTPETT+SHMPVHQDGSCNGLQHYAAL
Sbjct: 611 ADRPLEGKHWWLQAEDPFQCLAACINLSEALRSPTPETTISHMPVHQDGSCNGLQHYAAL 670
Query: 721 GRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRK 780
GRDKLGAAAVNL+GGDQPADVYSGIA RVLEIM+RDAEKDP+TNPNALHAR LI+QVDRK
Sbjct: 671 GRDKLGAAAVNLVGGDQPADVYSGIAARVLEIMKRDAEKDPRTNPNALHARRLISQVDRK 730
Query: 781 LVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAA 840
LVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD +LF ASCYAAKTTLTAL+EMFEAA
Sbjct: 731 LVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDVELFAASCYAAKTTLTALEEMFEAA 790
Query: 841 RSIMGWLGDCAKV 853
RSIMGWLGDCAKV
Sbjct: 791 RSIMGWLGDCAKV 803
>F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_01s0010g00690 PE=3 SV=1
Length = 978
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/858 (66%), Positives = 655/858 (76%), Gaps = 39/858 (4%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLE----VNSRHPLLGFNQ 56
MW N+ K +R Y FP+K LE VNS P+ G +
Sbjct: 1 MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFY--FPDKARALESQDHVNSLRPVAGLRR 58
Query: 57 VGAFT-SKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEYDY 115
+G + + +LGR F ++ P F +GYAS AEAI S D
Sbjct: 59 IGVLSFQQDELGRPGFGVTKTPVNFFGL---------FGYQKGYASAAEAIASE---EDM 106
Query: 116 SASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAREY 175
S + GG+ K+ +L++RQIKMETEAWE+AA+EY
Sbjct: 107 SG----VDEVQELVEEVNKGDKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEY 162
Query: 176 QELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPAD 235
+ELL DM +QKLAPNLPY+KSLFLGWFEPLR+ I AEQ+LCK + R + PYF+ LPAD
Sbjct: 163 RELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPAD 222
Query: 236 MMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNC 295
MMAVITMHKLMGLLMT G GSA+VVQ A IGEAIEHE RI RFMEKTKKK+ +++N
Sbjct: 223 MMAVITMHKLMGLLMTG-EGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNP 281
Query: 296 EGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQ 355
+G S+ PV K QK QQ IV+ +DD KPWGQ
Sbjct: 282 DGGSN--PVTK-------------EQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQ 326
Query: 356 EAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIE 415
+A VKVGS L++LLI+TAYIQPPA+Q+GDGPPDIRPAF HTLK + ++Q G++RYGVIE
Sbjct: 327 DANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIE 386
Query: 416 CDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKR 475
CD LV++GLEK+ARHMVIPYMPMLVPP NWTGYDKGAYLFLPSYVMRIHGA+QQR+A+KR
Sbjct: 387 CDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKR 446
Query: 476 APVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTED 535
AP L P FEALNTLG+TKWR+NKRVL VID+IWA GG LADLVDR+DVPLPEE DTED
Sbjct: 447 APRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTED 506
Query: 536 EAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 595
EAEIRKWKW V++V+KEN+ERHSQRCDIELKLAVARKMKDEDGF+YPHNLDFRGRAYPMH
Sbjct: 507 EAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMH 566
Query: 596 PYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLD 655
PYLNHLGSDLCRGILEF EGRPLGKSGL WLKIHLAN+YAGGVDKL Y+GR+AFTENHL+
Sbjct: 567 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLE 626
Query: 656 DIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQ 715
DIFDSA++PLEG+RWWL AEDPFQCLA CINL+EALRS +PETT+SHMPVHQDGSCNGLQ
Sbjct: 627 DIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQ 686
Query: 716 HYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLIN 775
HYAALGRDKLGAAAVNL+ G++PADVYSGIA RVL+IM+RDA+KDP T PNAL AR LI+
Sbjct: 687 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLIS 746
Query: 776 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQE 835
QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI D+ ++F ASCYAAKTTLTAL E
Sbjct: 747 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGE 806
Query: 836 MFEAARSIMGWLGDCAKV 853
MFEAARSIM WLGDCAKV
Sbjct: 807 MFEAARSIMSWLGDCAKV 824
>B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_765989 PE=3 SV=1
Length = 877
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/711 (75%), Positives = 604/711 (84%), Gaps = 10/711 (1%)
Query: 144 MDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFE 203
M GM KY +LK+RQIKMETEAWE AA+EYQE+LEDM +QKLAPNLPY+KSLFLGWFE
Sbjct: 22 MVAGMGIGKYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFE 81
Query: 204 PLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQ 263
PLR+AIVAEQELCK LR++H +F++LPADMMAVITMHKLMGLLMT G S +VVQ
Sbjct: 82 PLRDAIVAEQELCKRN-LRVSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQ 140
Query: 264 GASQIGEAIEHEARIYRFMEKTKKKTKATDN-CEGESDLAPVKKGXXXXXXXXXXXXXXX 322
AS +GEAIEHE RI++F+EKTKK+ EGESD A +++G
Sbjct: 141 AASVVGEAIEHEGRIHKFLEKTKKRKNVEAKISEGESD-AAIEEGEKLSKEQEKLRKKVT 199
Query: 323 XXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQI 382
QK QQ IV+G DD +PWGQE VKVGS L+QL+I+TAYIQPP +QI
Sbjct: 200 TLIKK-------QKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQI 252
Query: 383 GDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPP 442
GDGPPDIRPAF HTLK I+ D+Q S+RYGVIECD LV++GLEKSARHMVIPYMPMLVPP
Sbjct: 253 GDGPPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPP 312
Query: 443 NNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRV 502
NWTGYD+GA+LFLPSYVMRIHG+KQQRDAVKRA QL PVF+AL+TLG+TKWR+NKRV
Sbjct: 313 LNWTGYDQGAHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRV 372
Query: 503 LSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCD 562
L V+D+IWA GG LA LVDR+D PLPEE TEDEAEIRKW W V++V+KEN+ERHSQRCD
Sbjct: 373 LVVVDRIWASGGHLAGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCD 432
Query: 563 IELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSG 622
IELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLGKSG
Sbjct: 433 IELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSG 492
Query: 623 LHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLA 682
L WLKIHLANLYAGGVDKL YDGRI+FTENHLDDIFDSA++PLEG+RWWL AEDPFQCLA
Sbjct: 493 LRWLKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLA 552
Query: 683 ACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVY 742
ACINL+EALRSP+PET SH PVHQDGSCNGLQHYAALGRDKLGAAAVNL+GG++PADVY
Sbjct: 553 ACINLSEALRSPSPETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVY 612
Query: 743 SGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQI 802
SGIATRVL+IM+RDAEKDP NPN++HA+ L+NQVDRKLVKQTVMTSVYGVTYIGARDQI
Sbjct: 613 SGIATRVLDIMQRDAEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQI 672
Query: 803 KRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
KRRLKERC I DD QL+ A+CYAAKTTL AL+EMFE AR IM WLG+CAKV
Sbjct: 673 KRRLKERCIIADDPQLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKV 723
>B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_769753 PE=3 SV=1
Length = 852
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/703 (75%), Positives = 596/703 (84%), Gaps = 10/703 (1%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY +LK+RQ+KMETEAWE AREYQE+LEDM +QKLAPNLPY+KSLFLGWFEPLR+AI+A
Sbjct: 5 KYTILKRRQVKMETEAWEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAILA 64
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQELCK R+ H YFN+LPADMMAVITMHKLMGLLMT G S +VVQ AS +GEA
Sbjct: 65 EQELCK-VNSRVPHRAYFNDLPADMMAVITMHKLMGLLMTGNGGTASIRVVQAASVVGEA 123
Query: 272 IEHEARIYRFMEKTKKKTKATDNC-EGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
IE+EA+I++F+EKTKK+ + EGES +A + +G
Sbjct: 124 IENEAKIHKFLEKTKKRKNLKEKISEGES-VAAIYEGEKLTKEQEKLRKKVTTLMKK--- 179
Query: 331 XXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR 390
QK Q IV+G DD PWGQEA +KVGS L+QL+I+TAYIQPP +QIGDGPPDIR
Sbjct: 180 ----QKVHQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIR 235
Query: 391 PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDK 450
PAF HTLK I+ D+Q S+RYGVIECD LV++GLEKSARHMVIPYMPMLVPP NWTGYD+
Sbjct: 236 PAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQ 295
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
GAY FLPSYVMRIHGAKQQR A+KRA QL PVF+AL+TLG+TKWRVNKR+L VID+IW
Sbjct: 296 GAYFFLPSYVMRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIW 355
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
A GG LA LVDR+DVPLPEE TEDEAEIRKW+W VK+V+KEN+ERHSQRCD+ELKLAVA
Sbjct: 356 ASGGHLAGLVDREDVPLPEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVA 415
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
RKMKDE+GFYYPHN+DFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLGKSGL WLKIHL
Sbjct: 416 RKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHL 475
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
ANLYAGGVDKL YDGRI+FTENHLDDIFDSA++PLEG+RWWL AEDPFQCLA CINL+EA
Sbjct: 476 ANLYAGGVDKLSYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEA 535
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
LRSP+PET +SH PVHQDGSCNGLQHYAALGRDKLGAAAVNL+GG +PADVYSGIA RVL
Sbjct: 536 LRSPSPETAISHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVL 595
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
+IMRRDAE DP NPN++HA+ LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC
Sbjct: 596 DIMRRDAENDPAINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 655
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD QL+ A+CYAAKTTLTAL+EMFE AR IM WLG+CAKV
Sbjct: 656 NIADDPQLYSAACYAAKTTLTALEEMFEGARGIMAWLGECAKV 698
>M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000780mg PE=4 SV=1
Length = 1006
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/862 (66%), Positives = 649/862 (75%), Gaps = 19/862 (2%)
Query: 1 MWTNIVKRTSSRXXXXXXXXX--XXXXXXXXXXXYPNFPEKIVPLE----VNSRHPLLGF 54
MW N+ K+ +SR +F +K E +N+R ++GF
Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60
Query: 55 NQVGAFTS-KSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEY 113
QVG S K +LGR L P+ A+GYASVAEAI S+D E
Sbjct: 61 RQVGDMASQKEELGRCSSLNPSYPYGISGF---------CNYAKGYASVAEAIASTDGEE 111
Query: 114 DYSASXXXXXXXXXXXXXXXXXXXXXXX-XXMDGGMTSYKYKMLKKRQIKMETEAWEDAA 172
D S S + GM KY +L+KRQIK+ETEAW++AA
Sbjct: 112 DSSGSEEIQEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAA 171
Query: 173 REYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNEL 232
+EYQELL DM +QKLAPNLPY+KSLFLGWFEPLR+AI A+Q+ CK R +H PYF+ L
Sbjct: 172 KEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHL 231
Query: 233 PADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKAT 292
PAD MAVITMHKLMGLLMTN G+GS +VVQ A IGEAIEHE RI+RF+EKTKKK
Sbjct: 232 PADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTI 291
Query: 293 DNCEGESDLAPVK-KGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK 351
D + E+D PV + QK QQ GIV+ ++D K
Sbjct: 292 DK-KAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLK 350
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
PWGQEA VKVG L+QLL+DTAYIQPP +QIGDGPPDIRPAF H LK I+ D+Q S+RY
Sbjct: 351 PWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRY 410
Query: 412 GVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
GVIECD +V++G+EK+ARHMV+PYMPMLVPP NWTGYD+GAYLFLPSYVMR HGAKQQR+
Sbjct: 411 GVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRE 470
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEEL 531
VKR P QL PVFEAL+TLGSTKWRVNKRVL VID+IWA GG LADLVDR+DVPLPEE
Sbjct: 471 VVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEP 530
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
DTEDEAEIRKWKW +K +KEN+ERHSQRCDIELKLA +RKMKDE+GFYYPHNLDFRGRA
Sbjct: 531 DTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRA 590
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPMHPYLNHLGSD+CRGILEF EGR LGKSGL WLKIHLANLYAGGVDKL +D R AFTE
Sbjct: 591 YPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTE 650
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
NH+D+IFDSA++PLEG+RWWL AEDPFQCLAACINL EALRSP+PETT+S+MPVHQDGSC
Sbjct: 651 NHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSC 710
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALGRDKLGAAAVNL+GGD+PADVYSGIA RVL+IMR DAEKDP TNPNALHAR
Sbjct: 711 NGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHAR 770
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
LINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER +I DD LF A+CYAA+TTLT
Sbjct: 771 LLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLT 830
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
AL EMFEAARSIM WLG+CAKV
Sbjct: 831 ALGEMFEAARSIMSWLGECAKV 852
>Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBa0069P02.30-1 PE=2 SV=1
Length = 951
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/710 (71%), Positives = 595/710 (83%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +KY ML++RQI++ETEAWE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 171 GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 230
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H YFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 231 DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 289
Query: 267 QIGEAIEHEARIYRFMEKTKKKT-KATDNCE--GESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE RI++F+EKTKKK+ K DN E G+SD+A ++
Sbjct: 290 QIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQE----------------R 333
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q IV+ +D+ KPWGQ+A KVGS L++L+I+TAYIQPPA+Q
Sbjct: 334 LRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSA 393
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
DGPPDIRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 394 DGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 453
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
+WTGYDKGA+LFLPSYVMR HGA+QQRDAV+RAP Q+ VFEALNTLGSTKWRVNKRVL
Sbjct: 454 SWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVL 513
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDE +++KW+W+++ +KEN+ERHSQRCD+
Sbjct: 514 SIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDV 573
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKSGL
Sbjct: 574 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL 633
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL YDGRIAFTENHL+DIFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 634 RWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAV 693
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL EALRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 694 CINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYT 753
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRV+EIM+ DA KDP T+P+A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 754 GIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIK 813
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LF ASCYAAK TLTAL EMF+AARSIM WLGDCAKV
Sbjct: 814 RRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKV 863
>B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_28503 PE=2 SV=1
Length = 983
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/710 (71%), Positives = 595/710 (83%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +KY ML++RQI++ETEAWE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 137 GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 196
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H YFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 197 DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 255
Query: 267 QIGEAIEHEARIYRFMEKTKKKT-KATDNCE--GESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE RI++F+EKTKKK+ K DN E G+SD+A ++
Sbjct: 256 QIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQE----------------R 299
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q IV+ +D+ KPWGQ+A KVGS L++L+I+TAYIQPPA+Q
Sbjct: 300 LRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSA 359
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
DGPPDIRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 360 DGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 419
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
+WTGYDKGA+LFLPSYVMR HGA+QQRDAV+RAP Q+ VFEALNTLGSTKWRVNKRVL
Sbjct: 420 SWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVL 479
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDE +++KW+W+++ +KEN+ERHSQRCD+
Sbjct: 480 SIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDV 539
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKSGL
Sbjct: 540 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL 599
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL YDGRIAFTENHL+DIFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 600 RWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAV 659
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL EALRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 660 CINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYT 719
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRV+EIM+ DA KDP T+P+A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 720 GIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIK 779
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LF ASCYAAK TLTAL EMF+AARSIM WLGDCAKV
Sbjct: 780 RRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKV 829
>Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT1 PE=2 SV=1
Length = 1017
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/710 (71%), Positives = 595/710 (83%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +KY ML++RQI++ETEAWE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 171 GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 230
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H YFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 231 DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 289
Query: 267 QIGEAIEHEARIYRFMEKTKKKT-KATDNCE--GESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE RI++F+EKTKKK+ K DN E G+SD+A ++
Sbjct: 290 QIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQE----------------R 333
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q IV+ +D+ KPWGQ+A KVGS L++L+I+TAYIQPPA+Q
Sbjct: 334 LRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSA 393
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
DGPPDIRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 394 DGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 453
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
+WTGYDKGA+LFLPSYVMR HGA+QQRDAV+RAP Q+ VFEALNTLGSTKWRVNKRVL
Sbjct: 454 SWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVL 513
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDE +++KW+W+++ +KEN+ERHSQRCD+
Sbjct: 514 SIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDV 573
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKSGL
Sbjct: 574 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL 633
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL YDGRIAFTENHL+DIFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 634 RWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAV 693
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL EALRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 694 CINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYT 753
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRV+EIM+ DA KDP T+P+A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 754 GIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIK 813
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LF ASCYAAK TLTAL EMF+AARSIM WLGDCAKV
Sbjct: 814 RRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKV 863
>I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 993
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/710 (71%), Positives = 595/710 (83%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +KY ML++RQI++ETEAWE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 147 GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 206
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H +FN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 207 DQIIAEQELVGERGARASHARFFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 265
Query: 267 QIGEAIEHEARIYRFMEKTKKKT-KATDNCE--GESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE RI++F+EKTKKK+ K DN E G+SD+A ++
Sbjct: 266 QIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQE----------------R 309
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q IV+ +D+ KPWGQ+A KVGS L++L+I+TAYIQPPA+Q
Sbjct: 310 LRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSA 369
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
DGPPDIRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 370 DGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 429
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
+WTGYDKGA+LFLPSYVMR HGA+QQRDAV+RAP Q+ VFEALNTLGSTKWRVNKRVL
Sbjct: 430 SWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVL 489
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDE +++KW+W+++ +KEN+ERHSQRCD+
Sbjct: 490 SIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDV 549
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKSGL
Sbjct: 550 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL 609
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL YDGRIAFTENHL+DIFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 610 RWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAV 669
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL EALRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 670 CINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYT 729
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRV+EIM+ DA KDP T+P+A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 730 GIATRVVEIMKNDALKDPSTDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIK 789
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LF ASCYAAK TLTAL EMF+AARSIM WLGDCAKV
Sbjct: 790 RRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKV 839
>C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb02g039520 PE=3 SV=1
Length = 976
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/711 (70%), Positives = 590/711 (82%), Gaps = 21/711 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
GMT ++Y L++RQI++ETEAWE AA+EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 129 GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 188
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ IV EQEL D R +HGPYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 189 DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 247
Query: 267 QIGEAIEHEARIYRFMEKTKKKTKATDN----CEGESDLAPVKKGXXXXXXXXXXXXXXX 322
QIGEAIEHE RI RF+EKT+KK+ G++D+A ++
Sbjct: 248 QIGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQ---------------- 291
Query: 323 XXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQI 382
QK +Q IV+ +D+ +PWGQ+ Q KVGS L++L +DTA+IQPPA+Q
Sbjct: 292 RLRKKVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQS 351
Query: 383 GDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPP 442
DG PDIRPAF+H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 352 SDGLPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPP 411
Query: 443 NNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRV 502
WTGYDKGA+LFLPSYVMR HGA+QQR+AVKRAP Q+ VFEALNTLGSTKWRVNKRV
Sbjct: 412 ICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRV 471
Query: 503 LSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCD 562
LS++D+IW+ GG LADLVDR DVPLPE+ DTEDE I+ WKW +++V+KEN+ERHSQRCD
Sbjct: 472 LSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCD 531
Query: 563 IELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSG 622
+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGKSG
Sbjct: 532 VELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 591
Query: 623 LHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLA 682
LHWLKIHLANLYAGGVDKL YDGR+AFTENHL++IFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 592 LHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLA 651
Query: 683 ACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVY 742
C+NL EALRS +PETT+SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY
Sbjct: 652 VCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVY 711
Query: 743 SGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQI 802
+GIATRVLEIMR DA+KDP +P+ AR +++QVDRKLVKQTVMTSVYGVTY+GARDQI
Sbjct: 712 TGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQI 771
Query: 803 KRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
KRRLKER I D+A+LFGASCYAAK TLTAL EMF+AAR IM WLGDCAKV
Sbjct: 772 KRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKV 822
>J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB09G11010 PE=3 SV=1
Length = 963
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/710 (70%), Positives = 592/710 (83%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G YKY ML++RQ+++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFLGWFEPLR
Sbjct: 117 GFGYYKYAMLRRRQVQIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 176
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQ+L + R R +H YFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 177 DQIIAEQDLVCERRARASHARYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 235
Query: 267 QIGEAIEHEARIYRFMEKTKKK-TKATDNCE--GESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE R+++F+EK KKK +K DN E G SD+A ++
Sbjct: 236 QIGEAIEHEVRLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQE----------------R 279
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
K +Q IV+ +D+ KPWGQ+ KVGS L++L+I+TAYIQPPA+Q
Sbjct: 280 LRKKVTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSA 339
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
DGPPDIRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 340 DGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 399
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
+WTGYDKGA+LFLPSYVMR HGA+QQR+AVKRAP Q+ VFEAL+TLGSTKWRVNKRVL
Sbjct: 400 SWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVL 459
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDEA+++KW+W++K +KEN+ERHSQRCD+
Sbjct: 460 SIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDV 519
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKSGL
Sbjct: 520 ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL 579
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL YDGRIAFTENHL+DIFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 580 RWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAV 639
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL EALRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 640 CINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYT 699
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRVLEIMR DA KDP T+P+A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 700 GIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIK 759
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LF ASCYAAK TLTAL EMF+AARSIM WLGDCAK+
Sbjct: 760 RRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKI 809
>B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_1466350 PE=3 SV=1
Length = 997
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/815 (67%), Positives = 626/815 (76%), Gaps = 25/815 (3%)
Query: 47 SRHPLLGFNQVGAFTSKS-KLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEA 105
S + LG ++ +S++ + + F +PF F L +GYA+ A
Sbjct: 46 SPYSFLGSRRISGLSSQNHEFIKPSFTNLTNPFGFSHF-----------LFKGYATAAAQ 94
Query: 106 IESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMD-------GGMTSYKYKMLKK 158
+ +S E D+S GM KY +LKK
Sbjct: 95 VIASTDESDFSGCDELQEQIEEINKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKK 154
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKD 218
RQIKMETEAWE+AAREYQELL DM +QKLAPNLPY+KSLFLGWFEPLR+AI EQEL ++
Sbjct: 155 RQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSRE 214
Query: 219 TRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARI 278
+L+HGPYF+ LPADMMAVITMHKLMGLLMT G GS +VVQ A +GEAIEHEARI
Sbjct: 215 KNNKLSHGPYFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARI 274
Query: 279 YRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQ 338
+RF+EKTKKK K+T N E E L PV QK Q
Sbjct: 275 HRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTELMKK------QKVQ 328
Query: 339 QALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLK 398
Q G+ +G DD PWGQEAQVKVG L+QLLI+TAYIQPP NQ+GDG PDIRPAF HTLK
Sbjct: 329 QVRGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLK 388
Query: 399 NISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPS 458
N+ D+Q S+RYGVIECD +V+ GLEKSARHMVIPYMPMLVPP NW GYD+GAYLFLPS
Sbjct: 389 NVMKDTQKTSRRYGVIECDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPS 448
Query: 459 YVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLAD 518
YVMR HGAKQQR+AVKR P QL PV+EALNTLG+TKWR+NK++L+V+D+IWA GG LA
Sbjct: 449 YVMRTHGAKQQRNAVKRTPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANGGRLAG 508
Query: 519 LVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDG 578
L+DR+D PLPEEL+TEDE EI+KWKW VKNV+KEN+ERHSQRCDIELKLAVARKMKDEDG
Sbjct: 509 LIDREDEPLPEELETEDENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKMKDEDG 568
Query: 579 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGV 638
FYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLGKSG WLKIHLAN+YAGGV
Sbjct: 569 FYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANVYAGGV 628
Query: 639 DKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPET 698
DKL Y+GR+AFTENHLD IFDSA++PLEG+RWWL AEDPFQCLA C NLAEA RS +PET
Sbjct: 629 DKLSYEGRVAFTENHLDYIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPET 688
Query: 699 TMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE 758
T+SHMP+HQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGIA RVL+IMR DAE
Sbjct: 689 TISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAE 748
Query: 759 KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQL 818
KDP TNPNALHA+ LIN+VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ DD L
Sbjct: 749 KDPGTNPNALHAKLLINEVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVADDPSL 808
Query: 819 FGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ ASCYAAKTTL AL+EMFE ARSIM WLG+CAKV
Sbjct: 809 YAASCYAAKTTLMALEEMFEGARSIMAWLGECAKV 843
>K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria italica
GN=Si028824m.g PE=3 SV=1
Length = 972
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/710 (70%), Positives = 590/710 (83%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
GMT +KY L++RQI++ETEAWE AA+EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 126 GMTYHKYASLRRRQIRVETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKSLFLGWFEPLR 185
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I AEQEL + R +HGPYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 186 DQIAAEQELVANRGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 244
Query: 267 QIGEAIEHEARIYRFMEKTKKKTKATDNCEG---ESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE RI+RF+EKT+KK+ E +SD+A ++
Sbjct: 245 QIGEAIEHEVRIHRFLEKTRKKSNKEKENEEEIFDSDIAKEQQ----------------R 288
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q IV+ +DD +PWGQ+A KVGS L++L I+TA+IQPPA+Q
Sbjct: 289 LRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELFIETAHIQPPASQSS 348
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
DG PDIRPAF+H ++ + + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 349 DGLPDIRPAFRHEMRTVPKEQQKHSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 408
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
WTGYDKGA+LFLPSYVMR HGA+QQR+AVKRAP Q+ VFEALNTLGSTKWRVNKRVL
Sbjct: 409 CWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVL 468
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S+ID+IW+ GG LADLVDR DVPLPE+ DTEDE ++KW+W ++V+K N+ERHSQRCD+
Sbjct: 469 SIIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDV 528
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG+SGL
Sbjct: 529 ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGL 588
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL Y GRIAF ENHL++IFDSA++PLEGKRWWL AEDPFQCLA
Sbjct: 589 RWLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAV 648
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
C+NL EALRSP+PE T+SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVYS
Sbjct: 649 CMNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYS 708
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRV+EIMRRD++KDP T+P+A AR +++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 709 GIATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIK 768
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DDA+LFGASCYAAK TLTAL EMF+AARSIM WLGDCAKV
Sbjct: 769 RRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKV 818
>D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_14s0083g00790 PE=2 SV=1
Length = 1035
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/807 (65%), Positives = 616/807 (76%), Gaps = 31/807 (3%)
Query: 52 LGFNQVGAFTSKS-KLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSD 110
+GF ++G +S+ +GR F + F + YASVAEA+ S+D
Sbjct: 101 MGFRRIGEISSREDAVGRPSFGCLRNQMGFSGF-----------CPKSYASVAEAVSSTD 149
Query: 111 AEYDYSASXXXXXX--XXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAW 168
E D SAS M+ GM +Y L++RQ+K+ETEAW
Sbjct: 150 VEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAW 209
Query: 169 EDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPY 228
E AA+EY+ELL DM +QKLAPNLPYMKSLFLGWFEPLR+AIV EQELC+ + + + PY
Sbjct: 210 ELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPY 269
Query: 229 FNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKK 288
F++LPADMM+VITMHKL+GLLMT GS +VVQ A IG+AIE E RI+ F+EKTK+K
Sbjct: 270 FDQLPADMMSVITMHKLVGLLMTGGEH-GSTRVVQAACVIGDAIEQEVRIHNFLEKTKRK 328
Query: 289 TKATD-NCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGR 347
D N EG PV QK A IV+G
Sbjct: 329 KVGKDKNVEG-GGFDPV-------------IHEQEKLRKKVTNLMKKQKLHAARQIVKGH 374
Query: 348 DDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNISTDSQN 406
D+ KPWG EA+ KVGS L++LL+ TAYIQPP NQ+ D PPDIRPAF HT K + +++
Sbjct: 375 DNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKK 434
Query: 407 GSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGA 466
+R+GVIECD LV++GLE++ARHMVIPY+PMLVPP WTGYDKGA+LFLPSYVMR HGA
Sbjct: 435 IGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGA 494
Query: 467 KQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVP 526
+QQR+AVKRAP QL PVFEALNTLG+TKWR+NKR+ V+D+IWA GG LADLVDR DVP
Sbjct: 495 RQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVP 554
Query: 527 LPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 586
LPE+ DTEDEA++RKWKW VK+V+K N+ERHSQRCDIELKLAVARKMKDEDGF+YPHNLD
Sbjct: 555 LPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 614
Query: 587 FRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGR 646
FRGRAYPMHPYLNHLGSDLCRGILEF EGRPLG SGLHWLKIHLANL+AGGVDKL ++GR
Sbjct: 615 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGR 674
Query: 647 IAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVH 706
I FTENHLDDIFDSA++PLEGKRWWL AEDPFQ LAACINL+EALRS +PETT+SH+PVH
Sbjct: 675 ITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVH 734
Query: 707 QDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPN 766
QDGSCNGLQHYAALGRD+LGA AVNL+ G++PADVYSGIA RVL+IM+RDAEKDP P+
Sbjct: 735 QDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPD 794
Query: 767 ALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAA 826
AL AR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI DD +LFGA+CYAA
Sbjct: 795 ALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAA 854
Query: 827 KTTLTALQEMFEAARSIMGWLGDCAKV 853
K TLTAL EMF+AARSIM WLGDCAK+
Sbjct: 855 KITLTALGEMFQAARSIMSWLGDCAKI 881
>K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc05g010660.2 PE=3 SV=1
Length = 993
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/821 (65%), Positives = 627/821 (76%), Gaps = 32/821 (3%)
Query: 44 EVNSRHPLLGFNQVGAFT---SKSKL--------GRSKFLISGDPFCFXXXXXXXXXXXX 92
E R+P LG +Q F+ KS+ R+ +L + F
Sbjct: 40 EEGYRNPNLGVSQSSIFSRVNGKSRCLDGMCEDSCRNHYLGFSESSIFSRVKGDFRVCGS 99
Query: 93 LKLARGYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYK 152
L + R Y S AEAI S+ +E D + GGM K
Sbjct: 100 LGVLRSYGSAAEAIAST-SEEDIDEIQELIEEMNKENEALKTNLQPKQPKTV-GGMGIGK 157
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y +L++RQIK+ETEAWEDAA+EYQELL DM +QKLAPNLPY+KSLFLGWFEPL++AI AE
Sbjct: 158 YNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAE 217
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q+LC + + R + P+F++LPA+MMAVITMHKLMGLLMT G GSA+VVQ AS IGEAI
Sbjct: 218 QKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTG-GGSGSARVVQAASHIGEAI 276
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
EHEARI+RF+EKTKK E D+ ++
Sbjct: 277 EHEARIHRFLEKTKKNALDGSLEETAGDIMKERE----------------RLRKKVKILM 320
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
QK QQ IV+ +DD KPWGQ+ VKVG L+Q+LI+TAYIQPP +Q+ D PPDIRPA
Sbjct: 321 KKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPA 380
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
F HTLK + D+ GS+RYGVI+CD LV++GL+K+ARHMVIPYMPMLVPP NW+GYD+GA
Sbjct: 381 FMHTLKTV--DTVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGA 438
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
YLFLPSY+MR HGAKQQR+AVKR P QL PVF+AL+TLG+TKWRVNKRVL ++D+IWA
Sbjct: 439 YLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWAS 498
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GG LADLVDR+DVPLPEE DTE+E EI+KWKW VK +KEN ERHSQRCDIELKLAVARK
Sbjct: 499 GGRLADLVDREDVPLPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARK 558
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
MKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGKSGL WLKIHLAN
Sbjct: 559 MKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLAN 618
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
+Y GGVDKL +GR AF+ENH++DIFDSA++PLEG+RWWL AEDPFQCLA CI+++EALR
Sbjct: 619 VYGGGVDKLSCEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALR 678
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
SP+PET++SHMP+HQDGSCNGLQHYAALGRDKLGAAAVNL+ GD+PADVYSGIA RVL+I
Sbjct: 679 SPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDI 738
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
M+RDA+KDP T+PN + AR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI
Sbjct: 739 MKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI 798
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
EDD +LF A+CYAAKTTLTAL EMFEAARSIM WLGDCAK+
Sbjct: 799 EDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKI 839
>P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopodium album PE=2
SV=1
Length = 988
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/812 (65%), Positives = 614/812 (75%), Gaps = 28/812 (3%)
Query: 45 VNSRHPLLGFNQVGAFTSK-SKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVA 103
VN R P+LGF + G + S++G S F+ +PF + A+ A
Sbjct: 48 VNPRFPMLGFGRNGELLCRNSEMGGSNFMFYANPFGIFGFYAQST-----SCSYATAAAA 102
Query: 104 EAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKM 163
E I ++ +E D M GMT+ +Y +L+KRQIK+
Sbjct: 103 EEIVTASSEED-DEIRELVDEINKLERVKPQSIRRKEPINMVAGMTAGRYNVLRKRQIKV 161
Query: 164 ETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRL 223
ETEAW +AAREYQELL DM +QKLAPNLPYMKSLFLGWFEPL++AI A QE CK R R
Sbjct: 162 ETEAWNEAAREYQELLADMCEQKLAPNLPYMKSLFLGWFEPLKDAIKAHQEACKVGRNRP 221
Query: 224 THGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFME 283
+G F+ELPADMMAVITMHKLMGLLMT + G G V+Q A+QIGEA+E EA+I +F+E
Sbjct: 222 LYGECFDELPADMMAVITMHKLMGLLMTGS-GNGGTTVIQAATQIGEAVEQEAKIRKFLE 280
Query: 284 KTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGI 343
K+KKK +N E +S A + QK Q I
Sbjct: 281 KSKKKPATNNNDEDDSAKAQQR------------------LAKKVTTLMKKQKISQVREI 322
Query: 344 VRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTD 403
VRG+DD KPW Q+ QVKVG L+QLL +TAYIQPPA+Q+ DGPPDIRPAF HT K + +
Sbjct: 323 VRGQDDSKPWSQDNQVKVGCKLIQLLAETAYIQPPADQLADGPPDIRPAFIHTQKTVCKE 382
Query: 404 SQNG-SKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
SQ G +RYGVIECD LV++GLEK+ARHMVIPYMPML+PP NWTGYDKGAYL+LPSY+MR
Sbjct: 383 SQKGLRRRYGVIECDPLVRRGLEKTARHMVIPYMPMLIPPLNWTGYDKGAYLYLPSYIMR 442
Query: 463 IHGAKQQRDAVKR-APVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD 521
HG KQQRDA+KR A L VFEAL+TLG+TKWRVNK+VLS+ID+IWA GG LADLVD
Sbjct: 443 THGVKQQRDAIKRVARDNNLCTVFEALDTLGNTKWRVNKKVLSIIDRIWASGGCLADLVD 502
Query: 522 RKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYY 581
R+D+PLP E DT+D EI+KWKW VK+V+K+N ERHSQRCD ELKLAVARKMKDE+GFYY
Sbjct: 503 REDMPLPGEPDTDDAEEIKKWKWKVKHVKKDNAERHSQRCDTELKLAVARKMKDEEGFYY 562
Query: 582 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKL 641
PHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGRPLGKSGL+WLK+H+ANLYAGGVDKL
Sbjct: 563 PHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKVHVANLYAGGVDKL 622
Query: 642 CYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMS 701
Y+GR+AFTEN LDD+FDSA++PLEG+RWWL AEDPFQCLAACINL +ALRS +PE +S
Sbjct: 623 SYEGRVAFTENRLDDVFDSADRPLEGRRWWLTAEDPFQCLAACINLTDALRSSSPEDYLS 682
Query: 702 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDP 761
H+P+HQDGSCNGLQHYAALGRDKLGA AVNL+ G +PADVYSGIA RV EIMR DAEKDP
Sbjct: 683 HIPIHQDGSCNGLQHYAALGRDKLGAEAVNLVAGGKPADVYSGIAARVFEIMRGDAEKDP 742
Query: 762 KTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGA 821
PNA HA+ L+NQVDRKLVKQTVMTSVYGVTYIG RDQIKRRLKER AI DD LF A
Sbjct: 743 SIEPNAFHAKLLLNQVDRKLVKQTVMTSVYGVTYIGVRDQIKRRLKERDAIVDDNDLFAA 802
Query: 822 SCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
SCYAAKTT+TAL+EMFEAARSIMGWLGDCAK+
Sbjct: 803 SCYAAKTTMTALEEMFEAARSIMGWLGDCAKI 834
>M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 963
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/760 (65%), Positives = 605/760 (79%), Gaps = 44/760 (5%)
Query: 96 ARGYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKM 155
+R +ASVAEA+ S+DA+ D S M + + KY M
Sbjct: 92 SRSFASVAEAVSSTDADEDTST-----------------------IEEMQRLLDAEKYTM 128
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQ-- 213
L++RQI++ETEAWE AA+EY+ELL DM ++KLAPNLPYMKSLFLGWFEP R+ IVAEQ
Sbjct: 129 LRRRQIQIETEAWETAAKEYKELLMDMCERKLAPNLPYMKSLFLGWFEPFRDKIVAEQGQ 188
Query: 214 ELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIE 273
+ K+ + ++ YF++LPA+M+AVITMHKL+ LLMT G +VVQ Q+GEAIE
Sbjct: 189 SMAKN---KFSYQHYFSQLPAEMVAVITMHKLVSLLMTGGES-GGVRVVQAVCQVGEAIE 244
Query: 274 HEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXX 333
EARI+RF+EKT+KKT + D E + V K
Sbjct: 245 QEARIHRFLEKTRKKT-SKDQTSDEVEGGAVTK-------------EEQILRKKVTDLMK 290
Query: 334 XQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAF 393
QK QQ IVRG+D KPWGQ+AQVKVGS L++L ++TA+IQPP +Q DGPPDIRPAF
Sbjct: 291 KQKVQQVRKIVRGQDVSKPWGQDAQVKVGSRLIELFMETAFIQPPVSQSADGPPDIRPAF 350
Query: 394 KHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAY 453
+ ++ +S++ Q +KRYG+IECD LV+QGL+++ARHMVIPYMPML+PP NW GYD+GA+
Sbjct: 351 RRVIRIVSSE-QLKTKRYGIIECDPLVRQGLDRTARHMVIPYMPMLMPPLNWKGYDRGAH 409
Query: 454 LFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG 513
L LPSY+MRIHGA+QQR+A+KRAP Q+ VF+AL+TLG TKWRVNKRVLS++D+IW+ G
Sbjct: 410 LILPSYIMRIHGARQQREALKRAPKKQMQAVFQALDTLGCTKWRVNKRVLSIVDRIWSSG 469
Query: 514 GGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKM 573
G LADLVDR+D+PLPE+ DTEDE+E+RKWKW +++V+KEN+ERHS+RCD+ELKLAVARKM
Sbjct: 470 GRLADLVDREDIPLPEKPDTEDESELRKWKWKMRSVKKENSERHSRRCDVELKLAVARKM 529
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
KDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPL KSGL WLKIHLANL
Sbjct: 530 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLMKSGLRWLKIHLANL 589
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRS 693
YAGGVDKL YDGR+AFTENH++DIFDSA++PLEG+RWWL AEDPFQCLA CINLAEALRS
Sbjct: 590 YAGGVDKLSYDGRLAFTENHVEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRS 649
Query: 694 PTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIM 753
+PETT+SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ GD+PADVYSGIA RVL+IM
Sbjct: 650 SSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAARVLDIM 709
Query: 754 RRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIE 813
RRD++KDP +PNAL AR +++QVDRKLVKQTVMTSVYGVT+IGAR+QIK+RLKER
Sbjct: 710 RRDSQKDPAEDPNALLARLIVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLKERGVTA 769
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DD +LFGAS YAA+TTLTAL+EMFEAAR IM WLGDCAKV
Sbjct: 770 DDRELFGASSYAARTTLTALEEMFEAARKIMNWLGDCAKV 809
>M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000719mg PE=4 SV=1
Length = 1024
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/825 (64%), Positives = 614/825 (74%), Gaps = 34/825 (4%)
Query: 36 FPEKIVPLEVNS----RHPLLGFNQVGAFTSKSK-LGRSKFLISGDPFCFXXXXXXXXXX 90
FP P E++S R +GF GA +S + + F +P F
Sbjct: 73 FPGNFKPFELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGF------- 125
Query: 91 XXLKLARGYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDG--GM 148
+GYASVAEA+ S+D E + S + GM
Sbjct: 126 ----CPKGYASVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGM 181
Query: 149 TSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNA 208
KY MLK+RQIK+ETEAWE AA+EY+EL+ DM +QKLAPNLPYMKSLFLGWFEPLRNA
Sbjct: 182 GQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNA 241
Query: 209 IVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQI 268
I EQ+LC+ + + + PY ++LPADMM+VITMHKLMGLLMT G+ +VV A I
Sbjct: 242 IDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEH-GTCRVVAAACTI 300
Query: 269 GEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXX 328
GEAIE E RI++F+E T+KK D GESD A ++
Sbjct: 301 GEAIEQEVRIHKFLEMTRKKKVDKDQENGESDAAKKER---------------EKLNKKV 345
Query: 329 XXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPD 388
QK + GIV D K W EA+ KVGS L++LL TA+IQPPA+Q+ DGPPD
Sbjct: 346 TNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPD 405
Query: 389 IRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGY 448
IRPAF HT + ++ D++N S+RYGVIECD LV +GLEK+ARHMVIPYMPMLVPP NWTGY
Sbjct: 406 IRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGY 465
Query: 449 DKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQ 508
DKG Y FLPSYVMRIHGA+QQR+A+KR P QL PVF+AL+ LG+T+WRVNKRVLSV+D+
Sbjct: 466 DKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDR 525
Query: 509 IWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLA 568
IWA GG LADLVDR DVPLPEE DTEDE ++KWKW VK+V+KEN ERHSQRCD ELKLA
Sbjct: 526 IWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLA 585
Query: 569 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKI 628
VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLGKSGL WLKI
Sbjct: 586 VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKI 645
Query: 629 HLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLA 688
HLANLYAGGVDKL +GRIAFTENHLDDIFDS +KPLEG+RWWL+AEDPFQCLA CINLA
Sbjct: 646 HLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLA 705
Query: 689 EALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
EALRS +PET +SH+PVHQDGSCNGLQHYAALGRDKLGAA+VNL+ G++PADVYSGIA R
Sbjct: 706 EALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVR 765
Query: 749 VLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
VLEIMRRDA+KDP P AL A+ LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE
Sbjct: 766 VLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 825
Query: 809 RCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
R +I DDA++FG +CYAAK TLTAL EMFEAAR IM WLG+CAK+
Sbjct: 826 RGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKI 870
>E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm2
PE=3 SV=1
Length = 990
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/758 (65%), Positives = 598/758 (78%), Gaps = 18/758 (2%)
Query: 97 RGYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSY-KYKM 155
+G+ASVAEA+ S+D + G Y KY
Sbjct: 102 QGFASVAEAVSSTDEDTSAIEEIKGLVERFSEEVFKEKEGEFRGKRRTKFGNLGYAKYNA 161
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQEL 215
LK+RQIK+ETEAWE AA+EY+EL+ DM K KLA NLPY+KSLFLGWFEPLR+ I +EQE
Sbjct: 162 LKRRQIKIETEAWEQAAKEYKELMMDMCKNKLAXNLPYIKSLFLGWFEPLRDRIASEQEA 221
Query: 216 CKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHE 275
C+ + R +GPY N LPA+MMAVITMHKL+GL+MT+ + G A+VVQ A +IG+AIE+E
Sbjct: 222 CRRGKCRAAYGPYLNRLPAEMMAVITMHKLVGLMMTSGDH-GCARVVQAACRIGDAIENE 280
Query: 276 ARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 335
+RI+ F+EKTKKK + E E + +K Q
Sbjct: 281 SRIHSFLEKTKKKHARGNMAEEEPETVTKEK---------------EFLRKKVTNLIKKQ 325
Query: 336 KNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKH 395
K +Q +V+G+DD PWG EA KVG L++LLI+TAYIQPP +Q DGPPDIRPAF+H
Sbjct: 326 KLRQVTKLVKGKDDSAPWGVEAHAKVGCHLIELLIETAYIQPPLDQTVDGPPDIRPAFRH 385
Query: 396 TLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLF 455
+L+N+S + + S+RYGVIECD LV++GL+K+ARH VIPYMPMLVPP WTGYDKGA+LF
Sbjct: 386 SLRNVSKEQSSNSRRYGVIECDPLVRKGLDKTARHTVIPYMPMLVPPLCWTGYDKGAHLF 445
Query: 456 LPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGG 515
LPSY+MR HG++QQR+AVKR P QL +FEAL+TLGSTKWR+NKR+L+V+++IWA GG
Sbjct: 446 LPSYIMRTHGSRQQREAVKRTPTQQLQSIFEALDTLGSTKWRINKRLLAVVERIWASGGN 505
Query: 516 LADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
LA LVD +D PLPE+ DTEDEA +RKWKWS++N +KEN+E+HSQRCD+ELKL+VARKMK+
Sbjct: 506 LAGLVDCEDAPLPEKPDTEDEAVLRKWKWSLRNTKKENSEKHSQRCDVELKLSVARKMKE 565
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGKSGL WLKIHLANLYA
Sbjct: 566 EEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYA 625
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
GGVDKL YDGR+AF ENHLDDIFDSA+KPLEG RWWL AEDPFQCLAACINL+EALRS +
Sbjct: 626 GGVDKLSYDGRLAFVENHLDDIFDSADKPLEGSRWWLGAEDPFQCLAACINLSEALRSSS 685
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P+TT+SH+PVHQDGSCNGLQHYAALGRDKLGAA+VNL+ G++PADVYSGIA+ VLEIMRR
Sbjct: 686 PDTTISHVPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIASGVLEIMRR 745
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
D++KDP NP+A+ AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER I +D
Sbjct: 746 DSQKDPANNPSAVRARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDVIPED 805
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
Q+FGA+CYAAKTTL AL+EMF+AAR IM WLGDCAKV
Sbjct: 806 -QVFGAACYAAKTTLAALEEMFQAARGIMSWLGDCAKV 842
>I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI4G08880 PE=3 SV=1
Length = 959
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/710 (69%), Positives = 587/710 (82%), Gaps = 20/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
GM S KY L++RQ+++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFLGWFEPLR
Sbjct: 113 GMGSSKYAALRQRQVRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 172
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H PYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 173 DQIIAEQELVGERGARASHAPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 231
Query: 267 QIGEAIEHEARIYRFMEKTKKKTKA-TDNC--EGESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEAIEHE RI++F+EKTKKK DN G+SD+A ++
Sbjct: 232 QIGEAIEHEVRIHKFLEKTKKKNTKEVDNVVEAGDSDIAKEQQ----------------R 275
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q IV+ +D +PWGQ+A KVGS L++LLI+TA+IQPP +Q
Sbjct: 276 LRKKVTDLMKKQKIRQVRNIVKKQDSTRPWGQDAHAKVGSRLIELLIETAHIQPPVSQSA 335
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
D PDIRPAF H ++ ++ + Q S+RYGVI+CD L++QGL+++A+HMVIPYMPML+PP
Sbjct: 336 DSTPDIRPAFTHEMRTVTREQQKSSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPI 395
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
+WTGYDKGA+LFLPSYVMR HGA+QQR+AVK+AP Q+ +FEAL+TLGSTKWR+NK+VL
Sbjct: 396 SWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVL 455
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDE E++KW+W++++V+KEN+ERHSQRCD+
Sbjct: 456 SIVDRIWSSGGRLADLVDRTDVALPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDV 515
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG SGL
Sbjct: 516 ELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGL 575
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL YDGRIAFTENHL+DIFDSAN+PLEGKRWWL AEDPFQCLA
Sbjct: 576 CWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAV 635
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
C++L EALRS +PE +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVYS
Sbjct: 636 CMDLTEALRSSSPEAMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYS 695
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIATRV+EIMRRDA+KDP +P+A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 696 GIATRVVEIMRRDAQKDPALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIK 755
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LF ASCYAAK TLTAL EMFEAARSIM WLGDCAKV
Sbjct: 756 RRLKERGVIGDDSELFAASCYAAKVTLTALGEMFEAARSIMNWLGDCAKV 805
>Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays GN=rpoT1 PE=2
SV=1
Length = 975
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/712 (68%), Positives = 577/712 (81%), Gaps = 20/712 (2%)
Query: 145 DGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEP 204
+ GMT ++Y L++RQI++ETEAWE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEP
Sbjct: 127 EHGMTYHRYTSLRRRQIRIETEAWEQAANEYRELLADMCEQKLAPNLPYVKSLFLGWFEP 186
Query: 205 LRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQG 264
LR+ I EQEL D R +HGP+F+ LPADMMAVITMHKLMGLLMT + G GS +V+Q
Sbjct: 187 LRDQIATEQELVADPGSRASHGPFFSMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQA 245
Query: 265 ASQIGEAIEHEARIYRFMEKTKKKTKATDNCE---GESDLAPVKKGXXXXXXXXXXXXXX 321
A QIGEAIEHE RI RF+EKT+KK E G++++A
Sbjct: 246 ACQIGEAIEHEVRINRFLEKTRKKNNKEMENEEEAGDTNIA----------------VEQ 289
Query: 322 XXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQ 381
QK +Q IV+ +D +PWGQ+A KVGS L+ L I TA+IQPPA+Q
Sbjct: 290 QRLRKKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQ 349
Query: 382 IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVP 441
DG PDIRPAF+H ++ + + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+P
Sbjct: 350 SSDGLPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIP 409
Query: 442 PNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKR 501
P WTGYDKGA+LFLPSYVMR HGA+QQRDAVKRAP Q+ VFEALNTLGSTKWRVNKR
Sbjct: 410 PICWTGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKR 469
Query: 502 VLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRC 561
VLS++D+IW+ GG LADLVDR DVP+PE+ DTEDE ++ WKW ++ +K+N+ERHSQRC
Sbjct: 470 VLSIVDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRC 529
Query: 562 DIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKS 621
D+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKS
Sbjct: 530 DVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKS 589
Query: 622 GLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCL 681
GL WLKIHLANLYA GVDKL YDGRIAF ENHL++IFDSA++PLEG+RW L AEDPFQCL
Sbjct: 590 GLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRPLEGRRWRLGAEDPFQCL 649
Query: 682 AACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADV 741
A C+NL EALRS +PETT+SH+PVHQDGSCNGLQHYAALG+DKLGA AVNL+ G++PADV
Sbjct: 650 AVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADV 709
Query: 742 YSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQ 801
Y+GIA RV+EIMR DA+KDP P+A AR +++QVDRKLVKQTVMTSVYGVTYIGAR+Q
Sbjct: 710 YTGIANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQ 769
Query: 802 IKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I+RRLKER I +D++LFGASCYAAK TLTAL EMF+AARSIM WLGDCAKV
Sbjct: 770 IRRRLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKV 821
>E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm1
PE=3 SV=1
Length = 996
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/708 (69%), Positives = 574/708 (81%), Gaps = 19/708 (2%)
Query: 146 GGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPL 205
G + KYK K+RQIK+ETEAWE AAREY+EL DM KQKLAPNLPYMKSLFLGWFEPL
Sbjct: 154 GDLGFGKYKAQKRRQIKIETEAWEQAAREYRELFVDMCKQKLAPNLPYMKSLFLGWFEPL 213
Query: 206 RNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGA 265
R+ I AEQE + + R + Y + LPADM+AVITMHKLMGL+MT +N G A+VVQ A
Sbjct: 214 RDRIAAEQESYRKGKSRAAYARYIDHLPADMVAVITMHKLMGLMMT-SNDNGCARVVQAA 272
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
QIGEAIE+EARI+RF+EKTKKK + E E + +K
Sbjct: 273 CQIGEAIENEARIHRFLEKTKKKPANANKAEAEPEAVTKEK---------------EFLR 317
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDG 385
QK +Q IV+G+DD +PWG E KVG L++LL+ I P +Q DG
Sbjct: 318 KKVTSLIKKQKLRQVTKIVKGKDDSEPWGTEGHAKVGCRLIELLM-KPLISAPLDQTADG 376
Query: 386 PPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNW 445
AF+H+L++ S QN S+RYGVIECD LV++GL+++ARHMVIPYMPMLVPP W
Sbjct: 377 HL-YSSAFRHSLRSPSNHQQNNSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLGW 435
Query: 446 TGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSV 505
TGYDKGA+LFLPSYVMR HGA+QQR+AVK AP QL VFEAL+TLGSTKWRVNKRVL+V
Sbjct: 436 TGYDKGAHLFLPSYVMRTHGARQQREAVKSAPRKQLQSVFEALDTLGSTKWRVNKRVLAV 495
Query: 506 IDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIEL 565
+D+IWA GG LA LVD +DVPLPE+ DTEDEA +RKWKWS++N RKEN+ER+SQRCD+EL
Sbjct: 496 VDRIWASGGHLAGLVDCQDVPLPEKPDTEDEAVLRKWKWSLRNARKENSERYSQRCDVEL 555
Query: 566 KLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHW 625
KLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLGKSGLHW
Sbjct: 556 KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHW 615
Query: 626 LKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACI 685
LKIH+ANLYAGG+DKL YDGR+AF ENHLDDIFDS+++PLEG RWWL AEDPFQCLAACI
Sbjct: 616 LKIHVANLYAGGIDKLSYDGRLAFVENHLDDIFDSSDRPLEGSRWWLGAEDPFQCLAACI 675
Query: 686 NLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGI 745
NL++ALRS +PETT+SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGI
Sbjct: 676 NLSDALRSSSPETTISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 735
Query: 746 ATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 805
A RV +IMRRD++KDP NP+A AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRR
Sbjct: 736 AERVFDIMRRDSQKDPTNNPSAARARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 795
Query: 806 LKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
LKER AI DD Q+FGA+CYAAKTTLTAL+EMF+AAR+IM WLGDCAKV
Sbjct: 796 LKERDAIPDD-QVFGAACYAAKTTLTALEEMFQAARAIMSWLGDCAKV 842
>Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=1
Length = 1005
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/709 (69%), Positives = 582/709 (82%), Gaps = 15/709 (2%)
Query: 145 DGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEP 204
+ G+ KY L++RQI++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFL WFEP
Sbjct: 158 EHGIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLSWFEP 217
Query: 205 LRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQG 264
LR+ I+AEQEL + R +H PYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q
Sbjct: 218 LRDQIIAEQELVSERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQA 276
Query: 265 ASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXX 324
A QIGEA+EHE RI++F+EKTKKK + E+ A + K
Sbjct: 277 ACQIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAK-------------EQERL 323
Query: 325 XXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGD 384
QK +Q +V+ +D +PWGQ+A KVGS L++L I+TA+IQPPA+Q GD
Sbjct: 324 RKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGD 383
Query: 385 GPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNN 444
P+IRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP N
Sbjct: 384 STPEIRPAFTHEMRTVARE-QRKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPIN 442
Query: 445 WTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLS 504
WTGYDKGA+LFLPSYVMR HGA+QQR+AVK+AP Q+ +FEAL+ LGSTKWRVNK VLS
Sbjct: 443 WTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKEVLS 502
Query: 505 VIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
++D+IW+ GG LADLVDR DV LPE+ DTEDEAE++KW+WS+++ KEN+ERHSQRCD+E
Sbjct: 503 IVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAEKENSERHSQRCDVE 562
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
LKLAVARKMK+E GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG+SGL
Sbjct: 563 LKLAVARKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLR 622
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAAC 684
WLKIHLANLY GGVDKL YDGRIAFTENHLDDIFDSAN+PLEGKRWWLEAEDPFQCLA C
Sbjct: 623 WLKIHLANLYGGGVDKLSYDGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVC 682
Query: 685 INLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
++L EALRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVYSG
Sbjct: 683 MDLNEALRSPSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSG 742
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
IA RV+EIM+RDA+KDP + +A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIKR
Sbjct: 743 IAARVVEIMKRDAQKDPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKR 802
Query: 805 RLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RLKER I DD++LFGASCYAAK TLTAL EMFEAARSIM WLGDCAKV
Sbjct: 803 RLKERGVIADDSELFGASCYAAKVTLTALGEMFEAARSIMTWLGDCAKV 851
>Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) OS=Hordeum
vulgare GN=rpoTm PE=2 SV=1
Length = 862
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/710 (68%), Positives = 586/710 (82%), Gaps = 22/710 (3%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ KY L++RQI++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFLGWFEPLR
Sbjct: 18 GIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 77
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H PYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 78 DQIIAEQELVGERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 136
Query: 267 QIGEAIEHEARIYRFMEKTKKKTKA-TDNC--EGESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEA+EHE RI++F+EKTKKK D G+SD+A ++
Sbjct: 137 QIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEPGDSDIAKEQQ----------------L 180
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q +V+ +D +PWGQ+A KVGS L++L I+TA+IQPPA+Q G
Sbjct: 181 LRKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSG 240
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
D P+IRPAF H ++ ++ + + S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 241 DSTPEIRPAFTHEMRTVAREQK--SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 298
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
NWTGYDKGA+LFLPSYVMR HGA+QQR+AVK+AP Q+ +FEAL+ LGSTKWRVNKRVL
Sbjct: 299 NWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVL 358
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDEAE++KW+WS+++ +KEN+ERHSQRCD+
Sbjct: 359 SIVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDV 418
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMK+E GFY+PHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG+SGL
Sbjct: 419 ELKLAVARKMKEEVGFYHPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGL 478
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLY GGVDKL YDGRIAFTENHL+DIFDSAN+PLEGKRWWLEAEDPFQCLA
Sbjct: 479 RWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAV 538
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
C++L EALRS +PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVYS
Sbjct: 539 CMDLNEALRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYS 598
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIA RV+EIM+RDA+KDP + +A AR L++QVDR+LVKQTVMTSVYGVTY+GAR+QIK
Sbjct: 599 GIAARVVEIMKRDAQKDPAKDADAARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIK 658
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD++LFGASCYAAK TLTAL EMFEAARSIM WLGDCAKV
Sbjct: 659 RRLKERGVIADDSELFGASCYAAKVTLTALGEMFEAARSIMNWLGDCAKV 708
>K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1046
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/711 (68%), Positives = 580/711 (81%), Gaps = 19/711 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +Y+ L++RQ+K+ETE WE+AA+EY+ELL DM + KLAPNLPYMKSLFLGWFEPLR
Sbjct: 197 GVGQSRYQELRRRQVKIETEMWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLR 256
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGV--GSAKVVQG 264
+AIV EQE+ + + R+ + PYF +LPAD MAVI MHKLMGLLMT V G+A+VVQ
Sbjct: 257 DAIVKEQEMYSEGKNRMAYAPYFVQLPADKMAVIAMHKLMGLLMTGNERVTIGTARVVQA 316
Query: 265 ASQIGEAIEHEARIYRFMEKTKKKT--KATDNCEGESDLAPVKKGXXXXXXXXXXXXXXX 322
A IG+AIE+E RI++F+EKTKKK ++ N GES +A +K+
Sbjct: 317 ACGIGDAIENEVRIHKFLEKTKKKKGDRSNKNKAGES-VADIKE--------------EQ 361
Query: 323 XXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQI 382
QK G+V+G+DD KPWG + KVGS L++LL+ TAYIQPP++Q+
Sbjct: 362 KLRKKVIDLMKKQKLVAVRGLVKGKDDTKPWGAVIKTKVGSRLIELLLQTAYIQPPSDQL 421
Query: 383 GDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPP 442
D PDIRPAF H+ K ++ +S S+RYG+I+CD L+ +GLE++A++MVIPYMPMLVPP
Sbjct: 422 PDAAPDIRPAFVHSFKTVTKESIKASRRYGIIQCDPLILKGLERTAKNMVIPYMPMLVPP 481
Query: 443 NNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRV 502
NWTGYDKG +LFLPSYVMR HG +QQR+AVKRAP QL PVFEAL+TLG TKWRVNK+V
Sbjct: 482 VNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKV 541
Query: 503 LSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCD 562
LSV+D+IWA GG +ADLVDR DVPLP+E DT+DEA+I+KWKW K+++KEN ER+SQRCD
Sbjct: 542 LSVVDRIWASGGRIADLVDRDDVPLPDEPDTDDEAKIKKWKWKYKSLQKENRERYSQRCD 601
Query: 563 IELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSG 622
IELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGR LGKSG
Sbjct: 602 IELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRSLGKSG 661
Query: 623 LHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLA 682
L WLKIHLANLYAGGVDKL Y+GR+AFTENH +DIFDSA+KPLEG+RWWL+AEDP QCLA
Sbjct: 662 LRWLKIHLANLYAGGVDKLSYEGRLAFTENHFEDIFDSADKPLEGRRWWLKAEDPLQCLA 721
Query: 683 ACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVY 742
CI L EALRS +PET +SH+PVHQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVY
Sbjct: 722 VCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVTGEKPADVY 781
Query: 743 SGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQI 802
SGIA RV IM+RDA+KDP +ALHAR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QI
Sbjct: 782 SGIAARVSNIMQRDAQKDPAVFRDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQI 841
Query: 803 KRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
KRRLKER AI DD +LFGASCYAAK TLTAL+EMF+ AR IM WLGDCAKV
Sbjct: 842 KRRLKERNAISDDKELFGASCYAAKVTLTALEEMFQGARGIMSWLGDCAKV 892
>M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004354 PE=3 SV=1
Length = 971
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/802 (59%), Positives = 592/802 (73%), Gaps = 45/802 (5%)
Query: 64 SKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEYDYSASX---- 119
++LGR ++ PF F RG A+ A+ I+S+D E D S+
Sbjct: 49 NELGRLTSVLHNQPFAF----------------RGLATAAQTIDSTDPEDDSSSGSDEVN 92
Query: 120 --XXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQE 177
+ GM + KY LK+RQ+K+ETE WE AA+E QE
Sbjct: 93 ELMSAMEKETERVRKKARLAAKQQMKVVAGMGAQKYYSLKQRQVKLETEEWEKAAKECQE 152
Query: 178 LLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMM 237
++EDM +QKLAPNLPY+KSLFLGWFEPLR+AI A+ + K + ++ + Y +LPADMM
Sbjct: 153 IIEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIQADLDGFKVKKGKIPYASYMEQLPADMM 212
Query: 238 AVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDN--- 294
AVITMHK+MGLLMTN GVG KVV A+QIGEAIE EARI FM+K KKK D+
Sbjct: 213 AVITMHKMMGLLMTNAEGVGVVKVVNAATQIGEAIEQEARINSFMKKAKKKKNVVDDESE 272
Query: 295 ---CEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK 351
GE D K K +Q GIV+ D +K
Sbjct: 273 GVDASGEIDTKETLK-----------------LKKQINTLLKKHKVRQVRGIVKAHDSFK 315
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
WGQEAQVKVG+ L+QLL++TAYIQPPA Q DGPP+IRPAFK + + ++ +++ S++Y
Sbjct: 316 SWGQEAQVKVGARLIQLLMETAYIQPPAEQFDDGPPEIRPAFKQSSRTVTIENKKLSRKY 375
Query: 412 GVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
G IECD L+++GL+KSARHMVIPY+PML+PP NWTGYD+GA+ FLPSY+MR HGAKQQR
Sbjct: 376 GCIECDPLIRKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYIMRTHGAKQQRV 435
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEEL 531
A+KR P QL PVF+AL+TLG+TKWR+NK+VLS++D+IWA GG + LVDR D P+PEE
Sbjct: 436 AIKRTPKAQLEPVFQALDTLGNTKWRINKKVLSLVDRIWANGGRVGGLVDRDDAPIPEEP 495
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
D+ED+ EI++WKW +K KEN+ERHSQRCD+ELKL VARKMKDE+GFY+PHN+DFRGRA
Sbjct: 496 DSEDQEEIKQWKWKMKEANKENSERHSQRCDVELKLEVARKMKDEEGFYFPHNVDFRGRA 555
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPMHPYLNHLGSDLCRGILEF EG+PLG+SGL WLKIH+ANLY GGVDK Y R+AFTE
Sbjct: 556 YPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKIHIANLYGGGVDKFAYKDRVAFTE 615
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
+HL+DIFDS+++PLEGKRW L AEDPFQCLAAC+NL+EALRSP PE +SH+P+HQDGSC
Sbjct: 616 SHLEDIFDSSDRPLEGKRWRLNAEDPFQCLAACMNLSEALRSPFPEAAISHIPIHQDGSC 675
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALGRD++GAAAVNL G++PADVY+ IA RVL IMR+DAE+DP+T PNA +A+
Sbjct: 676 NGLQHYAALGRDQIGAAAVNLFTGEKPADVYADIAARVLNIMRQDAEEDPETFPNATYAK 735
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
+++QVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER A DD+Q F ASCYAA+ TL
Sbjct: 736 LMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAFADDSQNFHASCYAARVTLK 795
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
AL+EMFEAAR+IM W G+CAK+
Sbjct: 796 ALEEMFEAARAIMSWFGECAKI 817
>F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=MGP3 PE=2 SV=1
Length = 983
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/770 (61%), Positives = 576/770 (74%), Gaps = 26/770 (3%)
Query: 98 GYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMD-----GGMTSYK 152
GYA+ A+AI+S+D E + S S + GM + K
Sbjct: 72 GYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQK 131
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
+ MLK+RQ+KMETE WE AARE +E+L DM +QKLAPNLPYMKSLFLGWFEP+RNAI +
Sbjct: 132 FYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQDD 191
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
+ K + ++ + P+ +LPAD MAVITMHK+MGLLMTN GVG K+V A+QIGEA+
Sbjct: 192 LDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAV 251
Query: 273 EHEARIYRFMEKTKKK--TKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
E E RI F++K KK T T N E E+
Sbjct: 252 EQEVRINSFLQKKNKKNATDKTINTEAEN------------VSEEIVAKETEKARKQVTV 299
Query: 331 XXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR 390
K +Q +VR D +KPWGQEAQVKVG+ L+QLL++ AYIQPPA Q DGPPDIR
Sbjct: 300 LMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIR 359
Query: 391 PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKS-------ARHMVIPYMPMLVPPN 443
PAFK + ++ ++ S+RYG IECD LV +GL+KS ARHMVIPY+PML+PP
Sbjct: 360 PAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQ 419
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
NWTGYD+GA+ FLPSYVMR HGAKQQR +KR P QL PV+EAL+TLG+TKW++NK+VL
Sbjct: 420 NWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVL 479
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IWA GG + LVDR+DVP+PEE + ED+ + + W+W K K+NNERHSQRCDI
Sbjct: 480 SLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDI 539
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKL VARKMKDE+GFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PLGKSGL
Sbjct: 540 ELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGL 599
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIH+ANLYAGGVDKL Y+ RIAFTE+HL+DIFDS+++PLEGKRWWL AEDPFQCLAA
Sbjct: 600 RWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAA 659
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL+EALRSP PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 660 CINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYT 719
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
IA RVL+IM++DAE+DP+T PNA +A+ +++QVDRKLVKQTVMTSVYGVTY GARDQIK
Sbjct: 720 EIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIK 779
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+RLKER EDD+ F ASCYAAK TL AL+EMFEAAR+I W GDCAK+
Sbjct: 780 KRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKI 829
>R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10019728mg PE=4 SV=1
Length = 971
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/761 (62%), Positives = 582/761 (76%), Gaps = 19/761 (2%)
Query: 98 GYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMD-----GGMTSYK 152
GYA+ A+AI+S+D E + S S GM K
Sbjct: 71 GYATAAQAIDSTDPEDESSGSDEVNELMTEMGKETERILKKARLAATQPKRVIAGMGVQK 130
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y MLK+RQ+KMETE WE AARE +E+L DM +QKLAPNLPY+K LFLGWFEPLRNAI A+
Sbjct: 131 YYMLKQRQVKMETEEWEKAARECREILADMCEQKLAPNLPYVKFLFLGWFEPLRNAIQAD 190
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
+ K + ++ + P+ +LPADMM VITMHK+MGLLMTN GVG K+V A+QIGEA+
Sbjct: 191 LDAFKIKKGKIPYAPFMEQLPADMMTVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAV 250
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E EARI+ FM KTKKK T+ + A K+
Sbjct: 251 EQEARIHSFMLKTKKKKNETEKTSNDDSEAVAKE--------------TERMRKQVGVLM 296
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K ++ +V+ D +KPWGQEAQVKVGS L+QLL++ AYIQPPA Q DGPPDIRPA
Sbjct: 297 KKKKLREVKALVKKHDSFKPWGQEAQVKVGSRLIQLLMENAYIQPPAEQFDDGPPDIRPA 356
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FK T + ++ ++ S+RYG IECDSLVQ+GL+KSARHMVIPY+PML+PP NWTGYD+GA
Sbjct: 357 FKQTFRTVTLENTKTSRRYGCIECDSLVQKGLDKSARHMVIPYLPMLIPPQNWTGYDQGA 416
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+ FLPS++MR HGAKQQR +K+ P QL PVFEAL+TLG+TKWR+NK+VLS++D+IWA
Sbjct: 417 HFFLPSFIMRTHGAKQQRMVIKQTPKEQLKPVFEALDTLGNTKWRINKKVLSLVDRIWAN 476
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GG L LVDR+DVPLPEE +ED+ ++ WKW +K KENNERHSQRCDIELKL VARK
Sbjct: 477 GGRLGGLVDREDVPLPEEPVSEDQENVKDWKWELKKANKENNERHSQRCDIELKLEVARK 536
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
MKDE+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF EG+PLGKSGL WLKIH+AN
Sbjct: 537 MKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIAN 596
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
LYAGGVDKL Y+ R+AFTE+HL+DIFD++++PLEGKRWWL+AEDPFQCLAACI+L+EALR
Sbjct: 597 LYAGGVDKLAYEDRVAFTESHLEDIFDTSDRPLEGKRWWLKAEDPFQCLAACISLSEALR 656
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
SP PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+ IA RVL+I
Sbjct: 657 SPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYAEIAARVLKI 716
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
M++DAE+DP+T NA +A+ +++QVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER A
Sbjct: 717 MQQDAEEDPETFRNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAF 776
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DD+ F A+CYAAK TL AL+EMFEAAR+I W G+CAK+
Sbjct: 777 GDDSLTFHAACYAAKITLKALEEMFEAARAIKTWFGECAKI 817
>K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 690
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/748 (68%), Positives = 568/748 (75%), Gaps = 58/748 (7%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLGFNQVGAF 60
MWTN+ KR SS YP F + +N +P F + G
Sbjct: 1 MWTNLAKRASS----------TLRNTFRVSSLYPRFCKPQTSKTINP-YPFQAFPKAG-- 47
Query: 61 TSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEYDYSASXX 120
+ RSKFL G++SVAEAIES+D E DY
Sbjct: 48 -----VSRSKFL----------------------FYEGFSSVAEAIESTDTEDDYDEVQK 80
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLE 180
+SYKYK+LK+RQIK ETEAW +AAREY+ELLE
Sbjct: 81 LLQQMAKAEHKVDNSSS----------SSSYKYKLLKRRQIKSETEAWAEAAREYEELLE 130
Query: 181 DMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVI 240
DMR+QKLAPNLPYMKSLFLGWFEPLRNAI+A+QELCKD++ R++H PYFN+LPADMMAV+
Sbjct: 131 DMREQKLAPNLPYMKSLFLGWFEPLRNAILADQELCKDSKCRMSHAPYFNDLPADMMAVV 190
Query: 241 TMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESD 300
TMHKLM LLMTNTNGVG+A+V+Q A QIGEA+E+EARIY+FM++ K+ S
Sbjct: 191 TMHKLMALLMTNTNGVGTARVIQAACQIGEAVENEARIYQFMKREKENKS--------SH 242
Query: 301 LAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVK 360
+ PV++ QK QA+GIVRG+DDWK WGQEAQVK
Sbjct: 243 VVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVK 302
Query: 361 VGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLV 420
VGS LMQLLI+TAYIQPPAN IGDGPPDIRPAFKHTLK +S++SQ ++RYGVIECD LV
Sbjct: 303 VGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLV 362
Query: 421 QQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ 480
Q GLEKSARHMVIPYMPMLVPP NWTGYDKGAYLFLPSYVMR+HGAKQQR+AVKRAP +Q
Sbjct: 363 QNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQ 422
Query: 481 LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIR 540
L+PVFEALNTLGSTKWRVNKRVL VIDQIWA GG LADLVDR++VP P+E DT+DEAEIR
Sbjct: 423 LDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEIR 482
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
KWKW VK V+KENNERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 483 KWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 542
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
LGSDLCRGILEF EGRPLGKSGL WLKIHLANLYAGGVDKL YDGRI FTENHLDDIFDS
Sbjct: 543 LGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFDS 602
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A++PLEGKRWWL+AEDPFQCLAAC NL+EALRSPTPETT+SHMPVHQDGSCNGLQHYAAL
Sbjct: 603 ADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISHMPVHQDGSCNGLQHYAAL 662
Query: 721 GRDKLGAAAVNLIGGDQPADVYSGIATR 748
GRDKLGAAAVNL+GGDQPADVYSGIA R
Sbjct: 663 GRDKLGAAAVNLVGGDQPADVYSGIAAR 690
>D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_476028 PE=3 SV=1
Length = 975
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/761 (61%), Positives = 572/761 (75%), Gaps = 15/761 (1%)
Query: 98 GYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXX-----MDGGMTSYK 152
GYA+ A+AI+S+D E + S S + GM + K
Sbjct: 71 GYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAATPPKRVIAGMGAQK 130
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y ML++RQ+KMETE WE AARE +E+L DM +QKLAPNLPYMK+LFLGWFEP+RNAI A+
Sbjct: 131 YYMLRQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKTLFLGWFEPVRNAIQAD 190
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
+L K + ++ + P+ +LPAD MAVITM+K+MGLLMTN GVG K+V A+QIGEA+
Sbjct: 191 LDLFKIKKGKIPYAPFMEQLPADKMAVITMNKMMGLLMTNVEGVGIVKLVNAATQIGEAV 250
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E RI F++K KK E+
Sbjct: 251 EQEVRINSFLQKNNKKNATGKTINTEA----------VHVSEETVAKETEKARKRATVLM 300
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
K ++ +VR D +KPWGQEAQVKVG+ L+QLLI+ AYIQPPA Q DGPPDIRPA
Sbjct: 301 EKNKLREVKVLVRKHDSFKPWGQEAQVKVGARLIQLLIENAYIQPPAEQFDDGPPDIRPA 360
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FK + ++ ++ S+RYG IECD LV +GL+KSARHMVIPY+PML+PP NWTGYD+GA
Sbjct: 361 FKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGA 420
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+LFLPS++MR HGA QQR ++R P QL PVFEAL+TLG+TKWR+NK+VLS++D+IWA
Sbjct: 421 HLFLPSFIMRTHGAIQQRTVMRRTPKEQLEPVFEALDTLGNTKWRINKKVLSLVDRIWAN 480
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GG L LVDR+DVP+PEE + ED + + WKW K K+NNERHSQRCDIELKL VARK
Sbjct: 481 GGRLGGLVDREDVPVPEEPEREDHEKFKNWKWESKKAIKQNNERHSQRCDIELKLEVARK 540
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
MKDE+GFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PLGKSGL WLKIH+AN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIAN 600
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
LYAGGVDKL Y+ RIAFTE+HL+DI+DS+++PLEGKRWWL AEDPFQCLAACINL+EALR
Sbjct: 601 LYAGGVDKLAYEDRIAFTESHLEDIYDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALR 660
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
SP PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+ IA RV +I
Sbjct: 661 SPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYAEIAARVFKI 720
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
M++DA++DP+T PNA +A+ +++QVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER
Sbjct: 721 MQQDAKEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTF 780
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
EDD+ F A+CYAAK TL AL+EMFEAAR+I W GDCAK+
Sbjct: 781 EDDSLTFHAACYAAKITLKALEEMFEAARAIKSWFGDCAKI 821
>B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica oleracea var.
alboglabra GN=BoB028L01.020 PE=3 SV=1
Length = 951
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/714 (64%), Positives = 565/714 (79%), Gaps = 23/714 (3%)
Query: 146 GGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPL 205
GM + KY LK+RQ+K+ETE WE AA+E QE++EDM +QKLAPNLPY+KSLFLGWFEPL
Sbjct: 117 AGMGAQKYYSLKQRQVKLETEEWEKAAKECQEIIEDMCEQKLAPNLPYVKSLFLGWFEPL 176
Query: 206 RNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGA 265
R+AI A+ + K + ++ + Y +LPADMMAVITMHK+MGLLMTN GVG KVV A
Sbjct: 177 RDAIQADLDGFKVKKGKIPYASYMEQLPADMMAVITMHKMMGLLMTNAEGVGVVKVVNAA 236
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATD------NCEGESDLAPVKKGXXXXXXXXXXXX 319
+QIGEAIE EARI FM+K KKK D N GE + K
Sbjct: 237 TQIGEAIEQEARITSFMKKAKKKKNVVDDESEAVNASGEVETKETLK------------- 283
Query: 320 XXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA 379
K +Q IV+ D +K WGQEAQVKVG+ L+QLL++TAYIQPPA
Sbjct: 284 ----LKKQINTLLKKHKVRQVREIVKAHDSFKSWGQEAQVKVGARLIQLLMETAYIQPPA 339
Query: 380 NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPML 439
Q DGPP+IRPAFK + + ++ +++ S++YG IECD L+++GL+KSARHMVIPY+PML
Sbjct: 340 EQFDDGPPEIRPAFKQSSRIVTIENKKLSRKYGCIECDPLIRKGLDKSARHMVIPYLPML 399
Query: 440 VPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVN 499
+PP NWTGYD+GA+ FLPSY+MR HGAKQQR A+KR P QL PVF+ LNTLG+TKWR+N
Sbjct: 400 IPPQNWTGYDQGAHFFLPSYIMRTHGAKQQRIAIKRTPKAQLEPVFQGLNTLGNTKWRIN 459
Query: 500 KRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQ 559
K+VLS++D+IWA GG + LVDR DVP+PEE D+ED+ EI++WKW +K KEN+ERHSQ
Sbjct: 460 KKVLSLVDRIWANGGRVGGLVDRDDVPIPEEPDSEDQEEIKQWKWKMKEANKENSERHSQ 519
Query: 560 RCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLG 619
RCD+ELKL VARKMKDE+GFY+PHN+DFRGRAYPMHPYLNHLGSDLCRGILEF EG+PLG
Sbjct: 520 RCDVELKLEVARKMKDEEGFYFPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLG 579
Query: 620 KSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQ 679
+SGL WLKIH+ANLY GGVDK Y R+AF E+HL+DIFDS+++PLEGKRWWL AEDPFQ
Sbjct: 580 ESGLRWLKIHIANLYGGGVDKFAYKDRVAFAESHLEDIFDSSDRPLEGKRWWLNAEDPFQ 639
Query: 680 CLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPA 739
CLAAC+NL+EALRSP PE +SH+P+HQDGSCNGLQHYAALGRD++GAAAVNL G++PA
Sbjct: 640 CLAACMNLSEALRSPFPEAAVSHIPIHQDGSCNGLQHYAALGRDQIGAAAVNLFTGEKPA 699
Query: 740 DVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGAR 799
DVY+ IA RVL IMR+DAE+DP+T PNA +A+ +++QVDRKLVKQTVMTSVYGVTY GAR
Sbjct: 700 DVYADIAARVLNIMRQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGAR 759
Query: 800 DQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DQIK+RLKER A DD+Q F ASCYAA+ TL AL+EMFEAAR+IM W G+CAK+
Sbjct: 760 DQIKKRLKERGAFADDSQNFHASCYAARVTLKALEEMFEAARAIMSWFGECAKI 813
>Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia oleracea
GN=rpoT2 PE=2 SV=1
Length = 1036
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/766 (62%), Positives = 578/766 (75%), Gaps = 27/766 (3%)
Query: 97 RGYASVAEA--IESSDAEYDYSASXXXXXXXXXXXXXXXXXX---XXXXXXXMDGGMTSY 151
+GYASV EA S+D E D S M GM Y
Sbjct: 135 KGYASVVEAEVDSSTDLEDDVSVFDEIQELVEEMRKEEKRAKWRESHQRQQKMVAGMPLY 194
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY+ L+ RQIK+ETE+W+ AA EY+ELL DM K KLAPNLPY+KSLFLGWFEP R++I+
Sbjct: 195 KYQKLRNRQIKLETESWQQAANEYKELLADMCKLKLAPNLPYVKSLFLGWFEPFRDSIIE 254
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
+QEL + + R +G YF++LPADMMA+ITMHKLMG+LMT + G GS KVVQ A +GEA
Sbjct: 255 DQELIRQGKCRGAYGTYFDQLPADMMAIITMHKLMGMLMTGS-GHGSVKVVQAACALGEA 313
Query: 272 IEHEARIYRFMEKTKKKTKAT----DNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXX 327
IE E RI+ F+EK KKK D+ ++++
Sbjct: 314 IEQEVRIHTFLEKAKKKKGDRSKKPDDAASDAEI-----------------QEQQHLRKN 356
Query: 328 XXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPP 387
QK +QAL IV + D KPWG E + KVGS L++LLI TAYIQPPA+Q PP
Sbjct: 357 VNNLIKKQKRRQALKIVDSQGDLKPWGSETRAKVGSRLIELLIQTAYIQPPASQSACDPP 416
Query: 388 DIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTG 447
D+RPAF H+LK++ +++ +R+G+IECD L+ +GLEK+ RH+VIPYMPMLVPP WTG
Sbjct: 417 DLRPAFVHSLKSVGPENKKTGRRFGMIECDPLIIKGLEKTPRHIVIPYMPMLVPPEKWTG 476
Query: 448 YDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVID 507
YDKGAYL L S+VMR HG+K QR AV+RA QL VFEAL+TLG+TKWRVNK+VLS++D
Sbjct: 477 YDKGAYLVLRSFVMRTHGSKHQRVAVRRASEEQLKSVFEALDTLGNTKWRVNKKVLSIVD 536
Query: 508 QIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
++WA GG LADLVDR DVPLPE+ DTEDE+E+++WKW V++++KEN ERHSQRCD+ELKL
Sbjct: 537 RVWANGGRLADLVDRDDVPLPEKPDTEDESELKRWKWKVRSLKKENRERHSQRCDVELKL 596
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
AVARKMKDE+GF+YPHN+DFRGRAYPMHPYLNHLGSD+CRGILEF EGR +GKSGL WLK
Sbjct: 597 AVARKMKDEEGFFYPHNVDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRAVGKSGLRWLK 656
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IH+ANLYAGG+DKL +GRIAFTENHLDDIFDS +KPLEG+ WWL+AEDPFQCLA CI L
Sbjct: 657 IHVANLYAGGIDKLSLEGRIAFTENHLDDIFDSVDKPLEGRCWWLKAEDPFQCLAVCIEL 716
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
AEALRS PE SH+PVHQDGSCNGLQHYAALGRD+LGA AVNL+ G++PADVYSGIA+
Sbjct: 717 AEALRSTRPEAFKSHIPVHQDGSCNGLQHYAALGRDELGATAVNLVAGEKPADVYSGIAS 776
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
RVL IM DA+KDP P+ + AR LINQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLK
Sbjct: 777 RVLSIMEADAKKDPTDFPDTVLARKLINQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 836
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
ER A DD +++GA+CY A+ TLTAL EMF+AARSIM WLGDCAK+
Sbjct: 837 ERAAFSDDTEIYGAACYVARITLTALGEMFQAARSIMSWLGDCAKI 882
>M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra023533 PE=3 SV=1
Length = 975
Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/761 (63%), Positives = 574/761 (75%), Gaps = 16/761 (2%)
Query: 95 LARGYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXX--XXXXMDGGMTSYK 152
LARGY SVAE + S+D E D S + GM K
Sbjct: 75 LARGYTSVAEEVSSTDVEEDPSLADEVEELLKEMKKEKKREDHRSWRMRNQESVGMGRSK 134
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y+ L +RQ+K+ETE WE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR+ I E
Sbjct: 135 YRNLWRRQVKIETEEWERAANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDVISKE 194
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
QEL + + + + Y ++LPADM+AVITMHKLMG LMT + G KVVQ A +G+AI
Sbjct: 195 QELFRLGKSKAVYAHYIDQLPADMVAVITMHKLMGHLMTGGDN-GCVKVVQAACSVGDAI 253
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E RI F++KT+KK + + GE V+ G
Sbjct: 254 EQEIRICTFLDKTRKKEEDDNEESGE-----VENGNPMREQDKLRKKVNDLIKK------ 302
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
QK I++ D KPW +A+ KVGS L++LL+ TAYIQ P NQ + PD+RPA
Sbjct: 303 --QKLSAVRKILQSHDYTKPWSADARAKVGSHLIELLVRTAYIQSPTNQQDNDLPDVRPA 360
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FKHT K ++ S ++YGVIECD LV++GLEK+ R+ V+PYMPMLVPP NW+GYDKGA
Sbjct: 361 FKHTFKTVAQGSMKSGRKYGVIECDPLVRKGLEKTGRYAVMPYMPMLVPPLNWSGYDKGA 420
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
YLFL SY+M+ HGAKQQR+A+K AP QL PVFEAL+TLGST+WRVNKRVL+V+D+IW+
Sbjct: 421 YLFLASYIMKTHGAKQQREAIKSAPKGQLKPVFEALDTLGSTRWRVNKRVLTVVDRIWSS 480
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GG ADLVDR DVPLPE+ DTEDE+ ++KWKW +K+ +KEN+ERHS RCDIELKL+VARK
Sbjct: 481 GGCTADLVDRSDVPLPEKPDTEDESILKKWKWEMKSAKKENSERHSLRCDIELKLSVARK 540
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
MKDE+GFYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEF EGRPLG GL WLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGSPGLRWLKIHLAN 600
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
LYAGGVDKL Y+GR+AFTE+HLDDIFDSA++PLEG RWWL+AEDPFQCLA CINL EALR
Sbjct: 601 LYAGGVDKLSYEGRLAFTESHLDDIFDSADRPLEGNRWWLQAEDPFQCLAVCINLTEALR 660
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
SP+PET +SH+P+HQDGSCNGLQHYAALGRD +GA AVNL+ G++PADVYS IATRVL+I
Sbjct: 661 SPSPETVLSHIPIHQDGSCNGLQHYAALGRDTIGAEAVNLVAGEKPADVYSEIATRVLDI 720
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
MRRDA+KDP+ P+AL AR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A
Sbjct: 721 MRRDADKDPEIYPDALRARKLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSAF 780
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DD ++FGA+CYAAK TL A+ EMFEAAR+IM W G+CAK+
Sbjct: 781 SDDKEIFGAACYAAKVTLAAMDEMFEAARAIMHWFGECAKI 821
>K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1015
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/710 (67%), Positives = 573/710 (80%), Gaps = 17/710 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +Y+ L++RQ+K+ETE WE+AA+EY+ELL DM + KLAPNLPYMKSLFLGWFEPLR
Sbjct: 166 GVGQCRYQELRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLR 225
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTN--GVGSAKVVQG 264
+AIV EQE+ + + R + PYF +LPAD MAVI MHKLMGLLMT T VG+A+VVQ
Sbjct: 226 DAIVKEQEMYGEGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQA 285
Query: 265 ASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESD-LAPVKKGXXXXXXXXXXXXXXXX 323
A IG+AIE+E RI++F+EKTKKK S+ +A +K+
Sbjct: 286 ACGIGDAIENEVRIHKFLEKTKKKKGDRSKKNKASESVADIKE--------------EQK 331
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK G+V+G+DD KPWG + KVGS L++LL+ TAYIQPP +Q+
Sbjct: 332 LRKKVIDLMKKQKLVAVRGLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLL 391
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
D PDIRPAF H+ + ++ S SKRYG+++CD L+ +GLE++A++MVIPYMPMLVPP
Sbjct: 392 DAAPDIRPAFVHSFRTVAKVSAKASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPV 451
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
NW+GYDKG +LFLPSYVMR HGA+QQR+AVKRAP QL PVFEAL+TLG TKWRVNK+VL
Sbjct: 452 NWSGYDKGGHLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVL 511
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
SV+D+IWA GG +ADLVDR DVPLP++ T+DE +I+KWKW K+++KEN ER+SQRCDI
Sbjct: 512 SVVDRIWASGGRIADLVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDI 571
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGR LGKSGL
Sbjct: 572 ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGL 631
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL ++GR+ FTENH +DIFDSA+KPL+G+RWWL+AEDP QCLA
Sbjct: 632 QWLKIHLANLYAGGVDKLSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAV 691
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CI L EALRS +PET +SH+PVHQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYS
Sbjct: 692 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 751
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIA RV IM+RDA+KDP P+ALHAR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIK
Sbjct: 752 GIAARVSNIMQRDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIK 811
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER AI DD +LFGASCYAAK TLTAL+EMF+ AR IM WLGDCAKV
Sbjct: 812 RRLKERNAISDDTELFGASCYAAKVTLTALEEMFQGARGIMNWLGDCAKV 861
>B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_746127 PE=3 SV=1
Length = 847
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/710 (67%), Positives = 566/710 (79%), Gaps = 21/710 (2%)
Query: 148 MTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRN 207
M S KYK L++RQ+K+E EAWE AA+EY+ELL+DM + KLAPNLPYMK LFLGWFEPLR+
Sbjct: 1 MGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGWFEPLRD 60
Query: 208 AIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQ 267
AI EQE + + R + PYF+ LPADMM+VITMHKL ++M G A+VV A
Sbjct: 61 AIAKEQESIRRGKTRPDYSPYFDLLPADMMSVITMHKLTAMVMIGGEH-GCARVVAAACM 119
Query: 268 IGEAIEHEARIYRFMEKTKKKTKATDN----CEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
IG+AIE E RI+ F+EKT+KK + DN EGES
Sbjct: 120 IGDAIEQEIRIHNFLEKTRKKKENADNSKNSVEGES---------------PAVMNEEEK 164
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK IV+G DD K W +A+ KVGS L++LL+ TAYIQPP +Q+
Sbjct: 165 LRKKVTDLIKKQKLPAVRKIVKGHDDSKSWSTDAKAKVGSRLIELLLQTAYIQPPPDQLA 224
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
D PPD+RPAF HT + +S +++ S++YGVI+CDSLV +GLE++ RH+VIPYMPMLVPP
Sbjct: 225 DSPPDLRPAFVHTFRTVSYENKKTSRKYGVIQCDSLVLKGLEQTDRHIVIPYMPMLVPPL 284
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
W GYDKGA+LFLPSYVMRIHGAKQQR+AVKR P QL VFEAL+TLG+TKWRVNKRVL
Sbjct: 285 RWRGYDKGAHLFLPSYVMRIHGAKQQREAVKRTPKKQLQLVFEALDTLGNTKWRVNKRVL 344
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
SV+D+IW GG LADLVDR DVPLPE+ +TEDEA ++KWKW VK+V+KEN ERHS+RCD
Sbjct: 345 SVVDRIWNNGGRLADLVDRSDVPLPEKPETEDEALLKKWKWKVKSVKKENRERHSRRCDT 404
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELK+AVARKMK+E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGKSGL
Sbjct: 405 ELKIAVARKMKNEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 464
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANL+A GVDKL ++GRIAFTENHLDDIFDSA+KPLEGKRWWL AEDPFQCLA
Sbjct: 465 RWLKIHLANLFACGVDKLSHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAEDPFQCLAV 524
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL EALRS +PET +SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNL+ G++P DVYS
Sbjct: 525 CINLTEALRSSSPETCLSHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPTDVYS 584
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIA RVL+IMR DA++DP+ P+AL AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQI+
Sbjct: 585 GIAARVLDIMRSDAQEDPEVFPDALRARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIE 644
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER + D++++FG SCYAAK TLTAL EMFEAARSIM WLG+CAK+
Sbjct: 645 RRLKER-GLTDNSEIFGCSCYAAKVTLTALGEMFEAARSIMNWLGECAKI 693
>Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cleome spinosa PE=4
SV=1
Length = 1021
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/866 (56%), Positives = 587/866 (67%), Gaps = 61/866 (7%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXX--XXXXXYPNF----PEKIVPLEVNSRHPLLGF 54
MW NI K+T SR +P P I P+ + H + G+
Sbjct: 40 MWRNIAKQTISRSPVRLSVCRQSRGLLGFSSESIFPEIFIFRPSVIGPISSSGFHDM-GY 98
Query: 55 NQVGAFTSKSKL-GRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEY 113
++ + GR F D CF R Y + AEA+ S+D E
Sbjct: 99 SRTCEIPAPGDFSGRPGFGFLKDECCFHRFS-----------PRSYVNAAEAVSSTDIEE 147
Query: 114 DYSA--SXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDA 171
D S D GM KY+ LK+RQ+K+ETEAWE A
Sbjct: 148 DASVVDEVQELLREMKKEEKKEKVHLRRVKRQEDLGMLEKKYQSLKRRQVKIETEAWEKA 207
Query: 172 AREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNE 231
A EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR AI +QEL + + R + Y ++
Sbjct: 208 ANEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLREAIAKDQELYRLGKNRANYAYYIDQ 267
Query: 232 LPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKK--- 288
LPADM+AVITMHKLMGLLMT + G KV+ A +G+AIE E RI RF+EKTKKK
Sbjct: 268 LPADMIAVITMHKLMGLLMTGGDN-GCVKVIMAACTVGDAIEQEIRICRFLEKTKKKKEN 326
Query: 289 -TKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGR 347
++ +N E E+ + QK I+
Sbjct: 327 ISEGVENVEKETTV-----------------KEEDWLKRKVSELIKKQKLPAVRQILNSH 369
Query: 348 DDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNG 407
D KPW + + KVGS L++L + TAYIQPP NQ GD PPDIRPAF HT K + ++G
Sbjct: 370 DASKPWSTDVRAKVGSRLIELFMKTAYIQPPTNQRGDDPPDIRPAFVHTFKTVKNSKKSG 429
Query: 408 SKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAK 467
+RYGVIECD LV++GLEK+ HMV+PYMPMLVPP NW+GYD+GAY FLPSY+MRIHGAK
Sbjct: 430 -RRYGVIECDPLVRKGLEKTGWHMVMPYMPMLVPPVNWSGYDRGAYFFLPSYLMRIHGAK 488
Query: 468 QQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPL 527
QQR+A+K P QL VFEAL+TLG+ KWRVNKRVLS++D+IW GG LADLVDR DVPL
Sbjct: 489 QQREALKSTPRKQLQLVFEALDTLGNAKWRVNKRVLSIVDRIWNSGGRLADLVDRSDVPL 548
Query: 528 PEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 587
PE+ DTEDE ++KWKW VK+ KEN ERHSQRCDIELKL VARKMKDE+GFYYPHN+DF
Sbjct: 549 PEKPDTEDENILKKWKWKVKSANKENRERHSQRCDIELKLNVARKMKDEEGFYYPHNIDF 608
Query: 588 RGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRI 647
RGRAYPMHP+LNHLGSDLCRG+LEF EG+PLG SGL WLKIHLANLYAGGVDKL ++GR+
Sbjct: 609 RGRAYPMHPHLNHLGSDLCRGVLEFAEGKPLGSSGLRWLKIHLANLYAGGVDKLSFEGRL 668
Query: 648 AFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQ 707
AFTENHLDDIF+SA++PLEG+RWWL+AEDPFQCLA CIN+ EALRSP PET +SH+P+HQ
Sbjct: 669 AFTENHLDDIFNSADRPLEGRRWWLQAEDPFQCLAVCINITEALRSPCPETFVSHIPIHQ 728
Query: 708 DGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNA 767
LGAAAVNL+ G++PADVYSGIA RVL+IMRRDAE+DP+ P+A
Sbjct: 729 -----------------LGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEQDPEVFPDA 771
Query: 768 LHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAK 827
L ARNL+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER DD +LFGA+CYAAK
Sbjct: 772 LRARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSIFTDDTELFGAACYAAK 831
Query: 828 TTLTALQEMFEAARSIMGWLGDCAKV 853
TLTAL EMF+AAR IM WLG+CAK+
Sbjct: 832 VTLTALGEMFQAARDIMSWLGECAKI 857
>D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_909544 PE=3 SV=1
Length = 1009
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/802 (59%), Positives = 577/802 (71%), Gaps = 39/802 (4%)
Query: 52 LGFNQVGAFTSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDA 111
+GF + T + + +S+ ++G LARGYASVAE + S+D
Sbjct: 93 MGFRSLSGITRRDEFSKSERCLNG------------------TLARGYASVAEEVLSTDV 134
Query: 112 EYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDA 171
E + GM K++ L +RQ+K+ETE WE A
Sbjct: 135 EEEPEVHELLKEMKKEKKRESHRSWRMKKQEQF--GMGRTKFQNLWRRQVKIETEEWERA 192
Query: 172 AREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNE 231
A EY ELL DM +QKLAPNLPY+KSLFLGWFEPLR+AI +QEL + + + T+ Y ++
Sbjct: 193 AAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQ 252
Query: 232 LPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKA 291
LPAD ++VITMHKLMG LMT + G KVV A +G+AIE E RI F++KT+KK
Sbjct: 253 LPADKISVITMHKLMGHLMTGGDN-GCVKVVHAACTVGDAIEQEIRICTFLDKTRKKKGD 311
Query: 292 TDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK 351
+ GE V+ G QK I++ D K
Sbjct: 312 ENEESGE-----VENGTSMKEQDKLRKKVNELIKK--------QKLSAVRKILQSHDYTK 358
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
PW + + KVGS L++LL+ TAYIQ PA+Q + PD+RPAF HT + N ++Y
Sbjct: 359 PWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFR-----IANSGRKY 413
Query: 412 GVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
GVIECD LV++GLEKS R+ VIPYMPMLVPP W+GYDKGAYLFL SY+M+ HG+KQQR+
Sbjct: 414 GVIECDPLVRKGLEKSGRYAVIPYMPMLVPPLKWSGYDKGAYLFLASYIMKTHGSKQQRE 473
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEEL 531
A+K AP QL PVFEAL+TLGSTKWRVNKRVL+V+D+IW+ GG ADLVDR DVPLPE+
Sbjct: 474 ALKSAPKGQLLPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCTADLVDRSDVPLPEKP 533
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
DTEDE ++KWKW VK+ +K N+ERHSQRCD ELKL+VARKMKDE+ FYYPHN+DFRGRA
Sbjct: 534 DTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRA 593
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPM P+LNHLGSDLCRG+LEF EGRPLG SGL WLKIHLANLYAGGVDKL DGR+AFTE
Sbjct: 594 YPMPPHLNHLGSDLCRGVLEFAEGRPLGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTE 653
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
NHL+DIFDSA++PLEG RWWL+AEDPFQCLA CINL EALRSP+PET +SH+P+HQDGSC
Sbjct: 654 NHLEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQDGSC 713
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALGRD LGA AVNL+ G++PADVYSGIATRVL+IMRRDA++DP+ P+AL AR
Sbjct: 714 NGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEAYPDALRAR 773
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER D+ ++FGA+CYAAK TL
Sbjct: 774 KLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAACYAAKVTLA 833
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
A+ EMF+AAR+IM W GDCAK+
Sbjct: 834 AIDEMFQAARAIMRWFGDCAKI 855
>R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10003497mg PE=4 SV=1
Length = 1014
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/760 (62%), Positives = 568/760 (74%), Gaps = 18/760 (2%)
Query: 95 LARGYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYK 154
LARG+ SVAE + S+D E + + GM K++
Sbjct: 118 LARGFTSVAEEVLSTDVEEEPEVDELLKEMKKEKKRESHRSWRMKKQEHL--GMGRTKFQ 175
Query: 155 MLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQE 214
L +RQ+K+ETE WE AA EY+ELL DM ++KLAPNLPY+KSLFLGWFEPLR+AI EQE
Sbjct: 176 NLWRRQVKIETEEWERAAAEYRELLTDMCERKLAPNLPYVKSLFLGWFEPLRDAIAKEQE 235
Query: 215 LCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEH 274
+ + + T+ Y ++LPADM+AVITMHKLMG LMT G KVVQ A +G+AIE
Sbjct: 236 MYSLGKSKATYAHYLDQLPADMIAVITMHKLMGHLMTGGEN-GCIKVVQAACTVGDAIEQ 294
Query: 275 EARIYRFMEKTKKKTKATDNCE-GESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXX 333
E RI F++KT+KK K DN E GE + K
Sbjct: 295 EIRICTFLDKTRKK-KGDDNEESGEVENGTAMK-------------EQDKLRKMVNELIK 340
Query: 334 XQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAF 393
QK I++ D KPW + + KVGS L++LL+ TAYIQ PANQ + PD+RPAF
Sbjct: 341 KQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPANQQDNDMPDVRPAF 400
Query: 394 KHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAY 453
HT K ++ S ++YGVIECD LV++GLEKS R+ V+PYMPMLVPP W+GYDKGAY
Sbjct: 401 VHTFKTVAKGSMKSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 460
Query: 454 LFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG 513
LFL SY+M+ HGAKQQR+AVK AP QL PVFEAL+TLGSTKWRVNKRVL+V+D+IW+ G
Sbjct: 461 LFLASYIMKTHGAKQQREAVKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 520
Query: 514 GGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKM 573
G +ADLVDR DVPLPE+ DTEDE ++KW+W K+ +K N+ERHSQRCD ELKL+VARKM
Sbjct: 521 GCVADLVDRSDVPLPEKPDTEDENILKKWRWEAKSAKKVNSERHSQRCDTELKLSVARKM 580
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
KDE+GFYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEF EGRPLG GL WLKIHLANL
Sbjct: 581 KDEEGFYYPHNIDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGIPGLRWLKIHLANL 640
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRS 693
YAGGVDKL +GR+AFTENHL+DIFDSA++PLEG RWWL+AEDPFQCLA CINL EALRS
Sbjct: 641 YAGGVDKLSLEGRLAFTENHLEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRS 700
Query: 694 PTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIM 753
P+PET +SH+P+HQDGSCNGLQHYAALGRD LGA AVNL+ G++PADVYSGIATRVL+IM
Sbjct: 701 PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 760
Query: 754 RRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIE 813
RRDA++ P+ P+AL AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 761 RRDADRGPEAFPDALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 820
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
D+ ++FGA+CYAAK TL A+ EMF+AAR+IM W G+CAK+
Sbjct: 821 DEKEIFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKI 860
>F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=AT5G15700 PE=2 SV=1
Length = 1051
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/862 (56%), Positives = 591/862 (68%), Gaps = 53/862 (6%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLG------- 53
MW NI K+ SR PE I ++ R P+LG
Sbjct: 40 MWRNIAKQAISRSAARLNVSSQTRGLLVSS------PESIFSKNLSFRFPVLGSPCHGKG 93
Query: 54 FNQVGAFTSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEY 113
F + T + + +S+ +SG LARGY SVAE E +
Sbjct: 94 FRCLSGITRREEFSKSERCLSG------------------TLARGYTSVAEE-EVLSTDV 134
Query: 114 DYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAR 173
+ GM K++ L +RQ+K+ETE WE AA
Sbjct: 135 EEEPEVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAA 194
Query: 174 EYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELP 233
EY ELL DM +QKLAPNLPY+KSLFLGWFEPLR+AI +QEL + + + T+ Y ++LP
Sbjct: 195 EYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLP 254
Query: 234 ADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKK--KTKA 291
AD ++VITMHKLMG LMT + G KVV A +G+AIE E RI F++K KK +
Sbjct: 255 ADKISVITMHKLMGHLMTGGDN-GCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEE 313
Query: 292 TDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK 351
+ E E+ + K QK I++ D K
Sbjct: 314 SGGVENETSMKEQDK-----------------LRKKVNELIKKQKLSAVRKILQSHDYTK 356
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
PW + + KVGS L++LL+ TAYIQ PA+Q + PD+RPAF HT K ++ S N ++Y
Sbjct: 357 PWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKY 415
Query: 412 GVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
GVIECD LV++GLEKS R+ V+PYMPMLVPP W+GYDKGAYLFL SY+M+ HGAKQQR+
Sbjct: 416 GVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQRE 475
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEEL 531
A+K AP QL PVFEAL+TLGSTKWRVNKRVL+V+D+IW+ GG +AD+VDR DVPLPE+
Sbjct: 476 ALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKP 535
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
DTEDE ++KWKW VK+ +K N+ERHSQRCD ELKL+VARKMKDE+ FYYPHN+DFRGRA
Sbjct: 536 DTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRA 595
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPM P+LNHLGSDLCRG+LEF EGRP+G SGL WLKIHLANLYAGGVDKL DGR+AFTE
Sbjct: 596 YPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTE 655
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
NHLDDIFDSA++PLEG RWWL+AEDPFQCLA CI+L EALRSP+PET +SH+P+HQDGSC
Sbjct: 656 NHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSC 715
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALGRD LGA AVNL+ G++PADVYSGIATRVL+IMRRDA++DP+ P AL AR
Sbjct: 716 NGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRAR 775
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER D+ ++FGA+CYAAK TL
Sbjct: 776 KLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLA 835
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
A+ EMF+AAR+IM W G+CAK+
Sbjct: 836 AIDEMFQAARAIMRWFGECAKI 857
>E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTp
PE=3 SV=1
Length = 985
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/710 (63%), Positives = 548/710 (77%), Gaps = 27/710 (3%)
Query: 150 SYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAI 209
S KY +L++RQ+KMETEAWEDAAREY+EL+++M ++KLAP+LPY+KSLFLGWFEP R+AI
Sbjct: 143 SSKYNLLRRRQVKMETEAWEDAAREYRELIKEMCEKKLAPHLPYVKSLFLGWFEPFRDAI 202
Query: 210 VAEQELCKDTR--LRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQ 267
+QEL + + L + P+ LPADMMAVI MHK+M LLM N G ++V A
Sbjct: 203 KEDQELQRRRKKNLAAAYAPFIGHLPADMMAVIVMHKMMVLLM-NGQDDGCVRLVHAACH 261
Query: 268 IGEAIEHEARIYRFMEKTKKKTKA----TDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
IGEAIE E RIY F +K KK T+ ++N E ES
Sbjct: 262 IGEAIEQEVRIYNFFQKIKKSTRENQILSENHENES--------------------KNQE 301
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
+K + + ++ DD +PWG+++ K+GS + LLI T Y+QPP NQ+
Sbjct: 302 ALRKRVTNLLKKKKIRDVQLLVEADDVEPWGRDSHAKLGSRXIDLLIQTXYVQPPLNQLA 361
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
+GPP+IRPAF+HT K + N KRYG+IECD LV++GL+ +ARH+VIPYMPML+PP
Sbjct: 362 ZGPPEIRPAFRHTFKTXKKEXDNSVKRYGIIECDPLVRKGLDATARHLVIPYMPMLIPPK 421
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
WTGYDKG +LFLPSYVMR HGAKQQRDA+K P QL VFEAL+TLGSTKWRVNKRVL
Sbjct: 422 KWTGYDKGGHLFLPSYVMRTHGAKQQRDALKSVPKXQLKEVFEALDTLGSTKWRVNKRVL 481
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
VID +WA G +A LVD D+ LPE+ TEDEA++R+W+WSVK V+KEN ERH+QRCDI
Sbjct: 482 DVIDSLWASGRPIAGLVDHSDIALPEKPCTEDEAQMRRWRWSVKKVKKENCERHAQRCDI 541
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKL+VARKM+ EDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EG+PLGK+GL
Sbjct: 542 ELKLSVARKMRKEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGKPLGKTGL 601
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLY GGVDKL +DGR+ F ENHL DIFDSA +P+EG++WWL AEDPFQCLAA
Sbjct: 602 RWLKIHLANLYGGGVDKLSFDGRLTFVENHLADIFDSAERPIEGRQWWLNAEDPFQCLAA 661
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CI+L+ AL+S +PE +SH+PVH DGSCNGLQHYAALGRD+LGAA+VNL+ G++P DVYS
Sbjct: 662 CIDLSXALKSSSPEDAISHIPVHLDGSCNGLQHYAALGRDRLGAASVNLVSGEKPXDVYS 721
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIA RV+EI+ RD++KDP +P +L AR LI+QVDRKLVKQTVMTSVYGVTYIGARDQIK
Sbjct: 722 GIAARVMEIVVRDSKKDPAVHPTSLLARILIDQVDRKLVKQTVMTSVYGVTYIGARDQIK 781
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER I DD LF A+CYAAK TL+AL+EMF+AARSIM WLGDCAKV
Sbjct: 782 RRLKERDFITDDKLLFSAACYAAKVTLSALEEMFQAARSIMSWLGDCAKV 831
>K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/727 (67%), Positives = 547/727 (75%), Gaps = 58/727 (7%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLGFNQVGAF 60
MWTN+ KR SS YP F + +N +P F + G
Sbjct: 1 MWTNLAKRASS----------TLRNTFRVSSLYPRFCKPQTSKTINP-YPFQAFPKAG-- 47
Query: 61 TSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEYDYSASXX 120
+ RSKFL G++SVAEAIES+D E DY
Sbjct: 48 -----VSRSKFL----------------------FYEGFSSVAEAIESTDTEDDYDEVQK 80
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLE 180
+SYKYK+LK+RQIK ETEAW +AAREY+ELLE
Sbjct: 81 LLQQMAKAEHKVDNSSS----------SSSYKYKLLKRRQIKSETEAWAEAAREYEELLE 130
Query: 181 DMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVI 240
DMR+QKLAPNLPYMKSLFLGWFEPLRNAI+A+QELCKD++ R++H PYFN+LPADMMAV+
Sbjct: 131 DMREQKLAPNLPYMKSLFLGWFEPLRNAILADQELCKDSKCRMSHAPYFNDLPADMMAVV 190
Query: 241 TMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESD 300
TMHKLM LLMTNTNGVG+A+V+Q A QIGEA+E+EARIY+FM++ K+ S
Sbjct: 191 TMHKLMALLMTNTNGVGTARVIQAACQIGEAVENEARIYQFMKREKENKS--------SH 242
Query: 301 LAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVK 360
+ PV++ QK QA+GIVRG+DDWK WGQEAQVK
Sbjct: 243 VVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVK 302
Query: 361 VGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLV 420
VGS LMQLLI+TAYIQPPAN IGDGPPDIRPAFKHTLK +S++SQ ++RYGVIECD LV
Sbjct: 303 VGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLV 362
Query: 421 QQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ 480
Q GLEKSARHMVIPYMPMLVPP NWTGYDKGAYLFLPSYVMR+HGAKQQR+AVKRAP +Q
Sbjct: 363 QNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQ 422
Query: 481 LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIR 540
L+PVFEALNTLGSTKWRVNKRVL VIDQIWA GG LADLVDR++VP P+E DT+DEAEIR
Sbjct: 423 LDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEIR 482
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
KWKW VK V+KENNERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 483 KWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 542
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
LGSDLCRGILEF EGRPLGKSGL WLKIHLANLYAGGVDKL YDGRI FTENHLDDIFDS
Sbjct: 543 LGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFDS 602
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A++PLEGKRWWL+AEDPFQCLAAC NL+EALRSPTPETT+SHMPVHQDGSCNGLQHYAAL
Sbjct: 603 ADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISHMPVHQDGSCNGLQHYAAL 662
Query: 721 GRDKLGA 727
GRDK+ A
Sbjct: 663 GRDKIHA 669
>K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/726 (67%), Positives = 546/726 (75%), Gaps = 58/726 (7%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLGFNQVGAF 60
MWTN+ KR SS YP F + +N +P F + G
Sbjct: 1 MWTNLAKRASS----------TLRNTFRVSSLYPRFCKPQTSKTINP-YPFQAFPKAG-- 47
Query: 61 TSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEYDYSASXX 120
+ RSKFL G++SVAEAIES+D E DY
Sbjct: 48 -----VSRSKFL----------------------FYEGFSSVAEAIESTDTEDDYDEVQK 80
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLE 180
+SYKYK+LK+RQIK ETEAW +AAREY+ELLE
Sbjct: 81 LLQQMAKAEHKVDNSSS----------SSSYKYKLLKRRQIKSETEAWAEAAREYEELLE 130
Query: 181 DMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVI 240
DMR+QKLAPNLPYMKSLFLGWFEPLRNAI+A+QELCKD++ R++H PYFN+LPADMMAV+
Sbjct: 131 DMREQKLAPNLPYMKSLFLGWFEPLRNAILADQELCKDSKCRMSHAPYFNDLPADMMAVV 190
Query: 241 TMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESD 300
TMHKLM LLMTNTNGVG+A+V+Q A QIGEA+E+EARIY+FM++ K+ S
Sbjct: 191 TMHKLMALLMTNTNGVGTARVIQAACQIGEAVENEARIYQFMKREKENKS--------SH 242
Query: 301 LAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVK 360
+ PV++ QK QA+GIVRG+DDWK WGQEAQVK
Sbjct: 243 VVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVK 302
Query: 361 VGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLV 420
VGS LMQLLI+TAYIQPPAN IGDGPPDIRPAFKHTLK +S++SQ ++RYGVIECD LV
Sbjct: 303 VGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLV 362
Query: 421 QQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ 480
Q GLEKSARHMVIPYMPMLVPP NWTGYDKGAYLFLPSYVMR+HGAKQQR+AVKRAP +Q
Sbjct: 363 QNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQ 422
Query: 481 LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIR 540
L+PVFEALNTLGSTKWRVNKRVL VIDQIWA GG LADLVDR++VP P+E DT+DEAEIR
Sbjct: 423 LDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEIR 482
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
KWKW VK V+KENNERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 483 KWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 542
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
LGSDLCRGILEF EGRPLGKSGL WLKIHLANLYAGGVDKL YDGRI FTENHLDDIFDS
Sbjct: 543 LGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFDS 602
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A++PLEGKRWWL+AEDPFQCLAAC NL+EALRSPTPETT+SHMPVHQDGSCNGLQHYAAL
Sbjct: 603 ADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISHMPVHQDGSCNGLQHYAAL 662
Query: 721 GRDKLG 726
GRDK G
Sbjct: 663 GRDKNG 668
>G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_8g065900 PE=3 SV=1
Length = 727
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/573 (79%), Positives = 500/573 (87%), Gaps = 1/573 (0%)
Query: 282 MEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQAL 341
MEKTK K + + +S APVK QK QQAL
Sbjct: 1 MEKTKVKKATSHKSDSDSVPAPVKGENLTAEENEKLAKEEKRLRNKVASLIKKQKKQQAL 60
Query: 342 GIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNIS 401
GIV+GRD KPWGQEAQVKVGS L+QLLI+TAY++PPAN+ GDG PDI PAFKHTLK IS
Sbjct: 61 GIVKGRDQAKPWGQEAQVKVGSRLIQLLIETAYLEPPANKFGDGGPDIFPAFKHTLKTIS 120
Query: 402 TDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
DS NGS+RYGVIECD ++Q+GLEK+AR+MVIPYMPMLVPPNNW GYDKGAYLFLPSYVM
Sbjct: 121 NDSNNGSRRYGVIECDPMIQKGLEKTARNMVIPYMPMLVPPNNWIGYDKGAYLFLPSYVM 180
Query: 462 RIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD 521
RIHGAKQQRDA+K AP QL+ +FEALNTLG+TKWRVNK VL VIDQIWA GG +ADLVD
Sbjct: 181 RIHGAKQQRDALKWAPKNQLDSIFEALNTLGNTKWRVNKSVLGVIDQIWANGGRVADLVD 240
Query: 522 RKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYY 581
R D+PLPEELDTEDE+EIRKWKW VKNV+KENNERHSQRCDIELKLAVARK+K+EDGFYY
Sbjct: 241 RDDLPLPEELDTEDESEIRKWKWKVKNVKKENNERHSQRCDIELKLAVARKLKEEDGFYY 300
Query: 582 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA-GGVDK 640
PHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGK GL WLKIHLANLYA GGVDK
Sbjct: 301 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKKGLQWLKIHLANLYATGGVDK 360
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
L YDGR+AFTE+HLDDIFDSA++PLEGKRWWL+AEDPFQCLAACINL+EALRSP PE T+
Sbjct: 361 LSYDGRVAFTEDHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACINLSEALRSPNPEATL 420
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
SHMPVHQDGSCNGLQHYAALGRDKLGA+AVNL+GGD+PADVYSGIA RVL+IM+RDA KD
Sbjct: 421 SHMPVHQDGSCNGLQHYAALGRDKLGASAVNLVGGDKPADVYSGIAARVLQIMKRDALKD 480
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFG 820
P T+P+ALHAR LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA+EDD++LF
Sbjct: 481 PATDPHALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAVEDDSELFA 540
Query: 821 ASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
ASCYAAKTTLTAL+EMFEAARSIMGWLGDCAKV
Sbjct: 541 ASCYAAKTTLTALEEMFEAARSIMGWLGDCAKV 573
>K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 998
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/710 (65%), Positives = 556/710 (78%), Gaps = 34/710 (4%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +Y+ L++RQ+K+ETE WE+AA+EY+ELL DM + KLAPNLPYMKSLFLGWFEPLR
Sbjct: 166 GVGQCRYQELRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLR 225
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTN--GVGSAKVVQG 264
+AIV EQE+ + + R + PYF +LPAD MAVI MHKLMGLLMT T VG+A+VVQ
Sbjct: 226 DAIVKEQEMYGEGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQA 285
Query: 265 ASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESD-LAPVKKGXXXXXXXXXXXXXXXX 323
A IG+AIE+E RI++F+EKTKKK S+ +A +K+
Sbjct: 286 ACGIGDAIENEVRIHKFLEKTKKKKGDRSKKNKASESVADIKE--------------EQK 331
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK G+V+G+DD KPWG + KVGS L++LL+ TAYIQPP +Q+
Sbjct: 332 LRKKVIDLMKKQKLVAVRGLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLL 391
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
D PDIRPAF H+ + ++ S SKRYG+++CD L+ +GLE++A++MVIPYMPMLVPP
Sbjct: 392 DAAPDIRPAFVHSFRTVAKVSAKASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPV 451
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
NW+GYDKG +LFLPSYVMR HGA+QQR+AVKRAP QL PVFEAL+TLG TKWRVNK+VL
Sbjct: 452 NWSGYDKGGHLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVL 511
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
SV+D+IWA GG +ADLVDR DVPLP++ T+DE +I+KWKW K+++KEN ER+SQRCDI
Sbjct: 512 SVVDRIWASGGRIADLVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDI 571
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF EGR LGKSGL
Sbjct: 572 ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGL 631
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLYAGGVDKL ++GR+ FTENH +DIFDSA+KPL+G+RWWL+AEDP QCLA
Sbjct: 632 QWLKIHLANLYAGGVDKLSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAV 691
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CI L EALRS +PET +SH+PVHQ LGAAAVNL+ G++PADVYS
Sbjct: 692 CITLTEALRSSSPETFISHIPVHQ-----------------LGAAAVNLVAGEKPADVYS 734
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
GIA RV IM+RDA+KDP P+ALHAR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIK
Sbjct: 735 GIAARVSNIMQRDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIK 794
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RRLKER AI DD +LFGASCYAAK TLTAL+EMF+ AR IM WLGDCAKV
Sbjct: 795 RRLKERNAISDDTELFGASCYAAKVTLTALEEMFQGARGIMNWLGDCAKV 844
>M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000868mg PE=4 SV=1
Length = 976
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/702 (61%), Positives = 532/702 (75%), Gaps = 19/702 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y +L++RQIK ETEAWE EY++L + MR++KLAPNLPY+K+LFLGWFEPLR AI E
Sbjct: 139 YNVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIARE 198
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q+ + + + P+ + LPAD MA+I MHK+MGL+M N G +VVQ A IG AI
Sbjct: 199 QKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVG-NQDGCVQVVQAAVHIGMAI 257
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E RI+ F+EKTK K E L+ K+
Sbjct: 258 EQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKE-----------------ILRKRVNGL 300
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K + + +++ KPWG++ Q K+GS L++LL +TAY+QPP +Q+ D PPD+RPA
Sbjct: 301 IRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRPA 360
Query: 393 FKHTLKNIS-TDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
F+H K ++ + Q K YGVIECD LV GL+K+A+HM+IPY+PMLVPP W GYDKG
Sbjct: 361 FRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKG 420
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
+LFLPSYVMR HG+++Q DA++ Q+ VFEAL+ LGSTKWRVNK+VLSV++ IWA
Sbjct: 421 GHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWA 480
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
+GG +A LV+R+DVP+P++ +ED EI++WKWSV+ +K N ERHSQRCD ELKL+VAR
Sbjct: 481 RGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVAR 540
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG+LEF EGRPLGKSGL WLKIHLA
Sbjct: 541 KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 600
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
NLYAGGV+KL Y+GR+AF +NH+DDIFDSA P+ G RWWL AEDP QCLAACINL+EAL
Sbjct: 601 NLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEAL 660
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
SP+P T +SH+P+HQDGSCNGLQHYAALGRD L AAAVNL+ GD+PADVYS IA RV E
Sbjct: 661 NSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHE 720
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
IM+RD+ KDP T+PNAL AR L+NQ+DRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+
Sbjct: 721 IMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGL 780
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD LF A+CYAAK TL AL E+F+AAR IM WLGDCAKV
Sbjct: 781 ITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKV 822
>F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_11s0037g00630 PE=3 SV=1
Length = 979
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/702 (61%), Positives = 529/702 (75%), Gaps = 20/702 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y +L++RQ+K ETEAWE EY+E+ +M ++KLAPNLPY+K+LFLGWFEPLR AI E
Sbjct: 143 YGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKE 202
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q + + + + P+ LPAD MAVI MHK+MGL+M + G +VVQ A QIG AI
Sbjct: 203 QRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMG-HEEGCVRVVQAAVQIGMAI 261
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E RI+ F+EKTK N E + ++G
Sbjct: 262 EQEVRIHSFLEKTK-------NFERHKTVGHSQEGLREKEILRKRVKSFIRK-------- 306
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K + +V+ ++ PWG++ Q K+GS L++LL +TAY+Q P NQ D PPD+RPA
Sbjct: 307 --KKIIEVQKLVKN-EEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPA 363
Query: 393 FKHTLKNISTDS-QNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
F+HT K ++ +S Q ++YGVIECD LV GL+++A+HMVIPY+PML+PP W GYDKG
Sbjct: 364 FRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKG 423
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
YLFLPSYVMR HG+++Q+DAVK P QL VFEAL+TLG+TKWR+N+RVLSV++ IWA
Sbjct: 424 GYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWA 483
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
+GG L LVDR++VPLPE+ TED EI+ WKW+ + +K N ERHS RCD E+KL+VAR
Sbjct: 484 RGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVAR 543
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG+LEF EGRPLGKSGL WLKI LA
Sbjct: 544 KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLA 603
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
NLYAGGV+KL YDGR+AF +NHLDD+FDSA+ PL G RWWL AEDPFQCLAACINL+EAL
Sbjct: 604 NLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEAL 663
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RS +P T +SH+P+HQDGSCNGLQHYAALGR+ L A+AVNL+ G++PADVYS IA RV E
Sbjct: 664 RSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHE 723
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
IM+RD+ KDP T+P AL A+ LI QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRL E+
Sbjct: 724 IMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGL 783
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I D+ LF A+CYAAK TL AL E+F+AAR IM WLG+CAKV
Sbjct: 784 ITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKV 825
>B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_802205 PE=2 SV=1
Length = 982
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/703 (60%), Positives = 530/703 (75%), Gaps = 19/703 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY +L++RQI+ ETEAWE A EY L+++M ++KLAPNLPY+KSLFLGWFEPL+ AI
Sbjct: 144 KYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIER 203
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ+L K + + P LPAD MAVI MHK+MGL+M G +VVQ A QIG A
Sbjct: 204 EQKLEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLVMVGHED-GCVRVVQAAVQIGIA 262
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
IE E RI+ F+EKTK + + + + K+
Sbjct: 263 IEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKE-----------------MLRKRVNS 305
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
+K + + +D+ KPW ++ Q K+GS L++LL +TAY+QPP +Q PPD+RP
Sbjct: 306 LIRRKRLMEVQNLVIQDETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRP 365
Query: 392 AFKHTLKNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDK 450
AF+H K+++ + Q K+YGVIECD L+ GL+ +A+HM+IPY PMLVPP W GYDK
Sbjct: 366 AFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDK 425
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
G +LFLPSY+MR HG++QQ+DAV+ P Q+ VFEAL+TLG+TKWRVN +VL V+++IW
Sbjct: 426 GGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIW 485
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
A GG A LV+R D+P+PE+L ++D EI+KWKWSV+ +K N ERHSQRCD ELKL+VA
Sbjct: 486 ASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVA 545
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
RK+KDE+GFYYPHNLDFRGRAYPMHP+L HL SDLCRG+LEF EGRPLGKSGL WLKIHL
Sbjct: 546 RKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHL 605
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
ANLY+GGV+KL +DGR+AF ENHL +IFDSA P+ GKRWWL AEDPFQCLAACINL+EA
Sbjct: 606 ANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEA 665
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
L+S +P T +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ ++P+DVYS IATRV
Sbjct: 666 LKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVH 725
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
EI+RRD+ KDP TNP+AL A+ LI++VDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+
Sbjct: 726 EIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG 785
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD LF A+CYAAK TLTAL E+F+AAR IMGWLGDCAKV
Sbjct: 786 HITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKV 828
>M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1767
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 529/702 (75%), Gaps = 17/702 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY L++RQIK ETEAWE AA+EY+EL +M ++KLAP+LPY+KSLFLGWFEPLR+ I
Sbjct: 897 KYNSLRRRQIKAETEAWERAAQEYKELEREMLEKKLAPSLPYVKSLFLGWFEPLRDVIER 956
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ L K + + P+ LPAD MAVI MHK+MGLLM G ++VQ A +IGEA
Sbjct: 957 EQRLQKTKMQKAAYAPHIGLLPADKMAVIVMHKMMGLLMVGQED-GCIRLVQAAIRIGEA 1015
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
IE E +I ++EK+K+ + + EG+ ++ +
Sbjct: 1016 IEQEFKIQAYLEKSKRPRRRKN--EGDRNVILCTQ--------------QEILRKKVMKL 1059
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
+K + ++R + + WG++ Q K+GS L++LL+++A++Q P + + D PP+I P
Sbjct: 1060 IKMKKLIEVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQVPCDSLADCPPEILP 1119
Query: 392 AFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
AF+HT KNIS ++ RYGVIECD LV +G + +ARHMVIPY+PML+PP +W GYD G
Sbjct: 1120 AFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLPMLIPPKSWKGYDNG 1179
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
+LFLPSYVMR HGA++Q+ A+K P QL VFEAL+TLG TKWR+N+R+L VI+ +W+
Sbjct: 1180 GHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWRINRRILDVIEIVWS 1239
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
+GGG+A LVDRKD+ LP+ +TED EI+KW+WS + +K N+E H+QRCD+ELKL+VA
Sbjct: 1240 RGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMHAQRCDVELKLSVAH 1299
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KM+DE+GFYYPHN+DFRGRAYPMH +LNHL SDLCRGILEF EG+PLGKSGLHWLKIHLA
Sbjct: 1300 KMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKPLGKSGLHWLKIHLA 1359
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y GGV+KL YD R+ F +NHL DIFDSA P++G RWW+ AEDPFQCLAACI+L +AL
Sbjct: 1360 NIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDPFQCLAACIDLTKAL 1419
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
+S +P +SH+P+HQDGSCNGLQHYAALGRD L AAAVNL+ G++PADVYS IA RV E
Sbjct: 1420 KSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAMRVRE 1479
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+R+D+EKDP +P AL A+ L++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+
Sbjct: 1480 IIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGL 1539
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD LFGASCYAAK TL AL EMFEAAR IM WLGDCAK+
Sbjct: 1540 ITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKI 1581
>B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_911981 PE=3 SV=1
Length = 882
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/703 (60%), Positives = 527/703 (74%), Gaps = 19/703 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY +L++RQI+ ETEAWE A EY+ L+ +M ++KLAPNLPY+K L LGWFEPL+ AI
Sbjct: 44 KYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEK 103
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ++ K + + P LPAD MAVI MHK+MGLLM G +VVQ A QIG A
Sbjct: 104 EQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHED-GCVRVVQAAVQIGMA 162
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
IE E RI+ F+EKTK + E + + K+
Sbjct: 163 IEQEVRIHNFLEKTKNYQRKKTMHEVQETMDKEKE----------------VLRKRVNSL 206
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
++ + +V+ +D+ KPW + Q K+GS L++LL +TAY+QPP NQ D PPD+RP
Sbjct: 207 IRRKRLMEVQNLVK-QDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRP 265
Query: 392 AFKHTLKNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDK 450
AF+H K ++ + Q K+YGVIECD L+ GL+ +A+HM+IPY PMLVPP W GYDK
Sbjct: 266 AFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDK 325
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
G +LFLPSYVMR HG++QQ+ AV+ P Q+ VFEAL+TLG+TKWRVN+R+L V+++IW
Sbjct: 326 GGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIW 385
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
GG +A LVDR+D+P+PE+ ++D EI+KWKWSV+ +K N ERHSQRCD ELKL+VA
Sbjct: 386 TSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVA 445
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
RK+KDE+GFYYPHNLDFRGRAYPMHP+L HL SDLCRG+LEF EGRPLGKSGL WLKIHL
Sbjct: 446 RKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHL 505
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
ANLY+GGV+KL +DGR+AF ENHL +IFDSA P+ GKRWWL+AEDPFQCLAACINL+EA
Sbjct: 506 ANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEA 565
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
L S +P T +SH+P+HQDGSCNGLQHYAALGRD L AAAVNL+ ++P+DVYS IA RV
Sbjct: 566 LNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVH 625
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
EI+RRD+ KDP TNP+AL A+ L++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+
Sbjct: 626 EIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG 685
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD LF A+CY AK TLTAL E+F+AAR IM WLGDCAK+
Sbjct: 686 HITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKI 728
>Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia oleracea
GN=rpoT3 PE=2 SV=1
Length = 989
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/714 (58%), Positives = 530/714 (74%), Gaps = 43/714 (6%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY +L++RQIK ETEAWE EY+E + +MR +KLAPNLP +K+LFLGWFEPL+ AI
Sbjct: 153 KYNLLRRRQIKAETEAWESMVEEYREFVREMRDKKLAPNLPQVKALFLGWFEPLKKAIEK 212
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ+ + + + +G + + LPAD MAVI MHK+M LLM N G ++VQ A QIG A
Sbjct: 213 EQKSQRSRKQKAIYGYHIDMLPADKMAVIVMHKMMSLLMVG-NDAGCVRLVQAALQIGTA 271
Query: 272 IEHEARIYRFMEKTKK-KTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
IE E +I+ F+EKTK + A+D E DL K+
Sbjct: 272 IEQEIKIHSFLEKTKNIRKNASDLPE---DLLKEKE------------------------ 304
Query: 331 XXXXQKNQQALGIVRGR----------DDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPAN 380
Q+N+ I R R +D K W Q+ Q K+GS L++LLIDTAYIQ P +
Sbjct: 305 ---IQRNRVKSLIKRKRLFEAAKLVTSEDSKSWSQDTQAKLGSRLIELLIDTAYIQHPTS 361
Query: 381 QIGDGPPDIRPAFKHTLKNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPML 439
Q D PPD+RPAF+H K ++ + Q KRYGVIECD LV +G+++SAR+M+IPY+PML
Sbjct: 362 QSADTPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYVPML 421
Query: 440 VPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVN 499
+PP NW GYDKG YLFLPSYVMR HG+++Q+DA+++ P Q+ VFEALNTLG TKWR+N
Sbjct: 422 IPPKNWKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWRIN 481
Query: 500 KRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQ 559
++VL V++ +WA GG + LV+ DVPLPE+ TED AEI WKWSV+ +K N ERH+
Sbjct: 482 RKVLGVVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERHAL 541
Query: 560 RCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLG 619
RCD+ELK++VA+KMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG+LEF GRPLG
Sbjct: 542 RCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGRPLG 601
Query: 620 KSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQ 679
K+GLHWLKIHLAN+YAGGVDKL Y+ R AF ENHL+++FDSA P+ G RWWL AEDPFQ
Sbjct: 602 KTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDPFQ 661
Query: 680 CLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPA 739
CLAACI+L AL S +P + +S++P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PA
Sbjct: 662 CLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEEPA 721
Query: 740 DVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGAR 799
DVYS IA RV EIM +D+ KDPKT+P+A+ A+ L++QVDRKLVKQTVMTSVYGVT++GAR
Sbjct: 722 DVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAR 781
Query: 800 DQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+QIKRRL+E+ I DD LF A+CY+AK T++AL ++F+AAR IM WLGDCAKV
Sbjct: 782 EQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKV 835
>M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra039230 PE=3 SV=1
Length = 979
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/707 (58%), Positives = 534/707 (75%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL+ I
Sbjct: 144 KFDSLRRRQVKEETEAWERMVEEYRDLEKEMCEKSLAPNLPYVKHMFLGWFQPLKEVIER 203
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 204 EQRLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 262
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIEHE RI+ F+++T+K A D+ E D ++K
Sbjct: 263 IAIEHEVRIHNFLKRTRKNN-AGDSQEELKDKQLLRK--------------------RVN 301
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LL++TAY+QPP Q GD P+
Sbjct: 302 SLIRRKRIIDALKVVKS-EGIKPWGRATQAKLGSRLLELLMETAYVQPPLTQSGDSIPEF 360
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 361 RPAFRHKFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWR 418
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+++L V+
Sbjct: 419 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVV 478
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWSV+ +K N ERHS RCD+ELK
Sbjct: 479 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKAKKTNRERHSLRCDVELK 538
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGL+WL
Sbjct: 539 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWL 598
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL ++GR++F ENHLDDI DSA + G+RWWL+AEDPFQCLAAC+
Sbjct: 599 KIHLANLYAGGVEKLSHEGRLSFVENHLDDIMDSAENAIHGRRWWLKAEDPFQCLAACVV 658
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
LA+AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 659 LAQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 718
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 719 LRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 778
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 779 EEKGVITDERMLFSAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 825
>M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 777
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/634 (67%), Positives = 516/634 (81%), Gaps = 22/634 (3%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ KY L++RQI++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFLGWFEPLR
Sbjct: 156 GIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 215
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H PYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 216 DQIIAEQELVGERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 274
Query: 267 QIGEAIEHEARIYRFMEKTKKKTKA-TDNC--EGESDLAPVKKGXXXXXXXXXXXXXXXX 323
QIGEA+EHE RI++F+EKTKKK D G+SD+A ++
Sbjct: 275 QIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEPGDSDIAKEQQ----------------L 318
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
QK +Q +V+ +D +PWGQ+A KVGS L++L I+TA+IQPPA+Q G
Sbjct: 319 LRKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSG 378
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
D P+IRPAF H ++ ++ + + S+RYGVI+CD LV+QGL+++A+HMVIPYMPML+PP
Sbjct: 379 DSTPEIRPAFTHEMRTVAREQK--SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPI 436
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
NWTGYDKGA+LFLPSYVMR HGA+QQR+AVK+AP Q+ +FEAL+ LGSTKWRVNKRVL
Sbjct: 437 NWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVL 496
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IW+ GG LADLVDR DV LPE+ DTEDEAE++KW+WS+++ +KEN+ERHSQRCD+
Sbjct: 497 SIVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDV 556
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKLAVARKMK+E GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG+SGL
Sbjct: 557 ELKLAVARKMKEEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGL 616
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLANLY GGVDKL YDGRIAFTENHL+DIFDSAN+PLEGKRWWLEAEDPFQCLA
Sbjct: 617 RWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAV 676
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
C++L EALRS +PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVYS
Sbjct: 677 CMDLNEALRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYS 736
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQV 777
GIA RV+EIM+RDA+KDP + +A AR L++QV
Sbjct: 737 GIAARVVEIMKRDAQKDPAKDADAARARLLVDQV 770
>K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc07g005930.2 PE=3 SV=1
Length = 992
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/697 (59%), Positives = 514/697 (73%), Gaps = 26/697 (3%)
Query: 160 QIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDT 219
QIK ETEAWE EY+EL +M ++KLAPNLPY+K L LGWFEPLR AI EQ
Sbjct: 165 QIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQ 224
Query: 220 RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIY 279
+ R + P+ + LPAD MAVI MHKLMGLLM +VVQ A QIG A+E+E RI+
Sbjct: 225 KHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIH 284
Query: 280 RFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQ 339
FMEKTKK K +G+ D++ K +
Sbjct: 285 NFMEKTKKHQKHMTGAQGQEDMS-------------------RETMILRKRVKSLIKRNR 325
Query: 340 ALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTL 397
+ + + +P WG++ Q K+G L++LL +TAY+QPP +Q D PPDIRPAF+H
Sbjct: 326 VVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVF 385
Query: 398 KNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFL 456
+ + D +N K+YGVIECD LV G++++ + M+IPY+PMLVPP W GYDKG YLFL
Sbjct: 386 RIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFL 445
Query: 457 PSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
PSY+MR HG+++Q+DAV+ P Q+ V+EAL+TLGSTKWRVNKR+LSV++ IWA GG +
Sbjct: 446 PSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVETIWAGGGNI 505
Query: 517 ADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDE 576
A LVDRKDVP+PE L ++D E+++WKW V+ +K N E HSQRCD ELKL+VARK++DE
Sbjct: 506 AGLVDRKDVPIPE-LHSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLRDE 564
Query: 577 DGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAG 636
+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRGILEF EGRPLGKSGL WLK+HLA+LYAG
Sbjct: 565 EGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAG 624
Query: 637 GVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTP 696
G++KLCYD RIAF ENH+DDI DSA+ PL G RWWL AEDP QCLAACINL+EA++S +P
Sbjct: 625 GIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSP 684
Query: 697 ETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRD 756
T +SH+P+HQDGSCNGLQHYAALGRD + AAAVNL+ G++PADVY+ IA RV I+R D
Sbjct: 685 HTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGD 744
Query: 757 AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDA 816
+ KDP T+PNAL A+ LI+QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+ I+DD
Sbjct: 745 STKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDR 804
Query: 817 QLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
LF ASCY TL AL E+F+AAR M WLGDCAKV
Sbjct: 805 LLFTASCY---VTLAALGELFQAARGTMTWLGDCAKV 838
>R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10025273mg PE=4 SV=1
Length = 991
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/707 (58%), Positives = 531/707 (75%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 156 KFDSLRRRQVKEETEAWEKMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 215
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 216 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 274
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 275 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 313
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+TAY+QPP Q GD P+
Sbjct: 314 SLIRRKRIIDALKVVKS-EGIKPWGRATQAKLGSRLLELLIETAYVQPPLTQSGDSIPEF 372
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 373 RPAFRHKFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMIIPYVPMLVPPKRWK 430
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA++ + VFEAL+TLG+TKWRVN+++L V+
Sbjct: 431 GYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVV 490
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWSV+ K N ERHS RCD+ELK
Sbjct: 491 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKANKINRERHSLRCDVELK 550
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 551 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 610
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +D R+AF E HLDD+ DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 611 KIHLANLYAGGVEKLSHDARLAFVETHLDDVMDSAENPIHGKRWWLKAEDPFQCLAACVI 670
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 671 LTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 730
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 731 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 790
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 791 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 837
>D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_481268 PE=3 SV=1
Length = 990
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/707 (58%), Positives = 530/707 (74%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 155 KFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 214
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 215 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 273
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 274 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 312
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+ AY+QPP Q GD P+
Sbjct: 313 SLIRRKRIIDALKVVKT-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEF 371
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 372 RPAFRHKFKTVT--KYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 429
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA++ + VFEAL+TLG+TKWRVN+ +L V+
Sbjct: 430 GYDKGGYLFLPSYIMRTHGSKKQQDALRDISHKTAHRVFEALDTLGNTKWRVNRNILDVV 489
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED EI+ WKWSV+ K N ERHS RCD+ELK
Sbjct: 490 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINRERHSLRCDVELK 549
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 550 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 609
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANL+AGGV+KL +D R+AF ENHLDDI DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 610 KIHLANLFAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVI 669
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +ALRSP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 670 LTQALRSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 729
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 730 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 789
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 790 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 836
>Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At2g24120 PE=2 SV=1
Length = 993
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/707 (58%), Positives = 529/707 (74%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 158 KFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 217
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 218 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 276
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 277 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 315
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+ AY+QPP Q GD P+
Sbjct: 316 SLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEF 374
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 375 RPAFRHRFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 432
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+ +L V+
Sbjct: 433 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVV 492
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWS + K N ERHS RCD+ELK
Sbjct: 493 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELK 552
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 553 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 612
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +D R+AF ENHLDDI DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 613 KIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVI 672
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 673 LTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 732
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 733 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 792
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 793 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 839
>F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=SCA3 PE=2 SV=1
Length = 895
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/707 (58%), Positives = 529/707 (74%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 158 KFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 217
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 218 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 276
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 277 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 315
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+ AY+QPP Q GD P+
Sbjct: 316 SLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEF 374
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 375 RPAFRHRFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 432
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+ +L V+
Sbjct: 433 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVV 492
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWS + K N ERHS RCD+ELK
Sbjct: 493 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELK 552
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 553 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 612
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +D R+AF ENHLDDI DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 613 KIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVI 672
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 673 LTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 732
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 733 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 792
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 793 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 839
>Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT2 PE=2 SV=1
Length = 953
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/702 (56%), Positives = 525/702 (74%), Gaps = 20/702 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
+++ L++RQ+K ETEAW AA EY+EL +M ++LAP LPY+KSLFLGWFEPLR+AI
Sbjct: 118 EHRRLRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIAR 177
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
+QE+ + R++ + Y LPAD +AVI MHK+MGLLM++ +GV S +VVQ A IGEA
Sbjct: 178 DQEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEA 237
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
+E E ++ F +KT+KK+ ++ E + A +K
Sbjct: 238 VEREFKVQTFFQKTRKKSAGENDLALEKEQAKCRK--------------------RVKSL 277
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
+K +A IV+ + + WG E+QVK+G+ L++LL+D+A++Q PA+Q + PDIRP
Sbjct: 278 VRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRP 337
Query: 392 AFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
AFKH L+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLV P W GYD G
Sbjct: 338 AFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTG 397
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
YLFLPSY+MR HG K Q++A+K P QL VFEAL+TLGSTKWRVN+RV + ++ IW+
Sbjct: 398 GYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIWS 457
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
+GGG+A LVD++++PLPE +TED EI+KWKWS+K +K N E H++RCD ELKL+VAR
Sbjct: 458 RGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERCDTELKLSVAR 517
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KM++EDGFYYPHNLDFRGRAYPMH +L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLA
Sbjct: 518 KMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLA 577
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N Y GG++KL ++ ++AF EN L DIFDSA P++G WW+ AEDPFQCLAAC++L++AL
Sbjct: 578 NKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDAL 637
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
+S +P+ +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ GD+PAD+YS IA RVL+
Sbjct: 638 KSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAARVLD 697
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
++R D+ +DP TNP A AR L++QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+
Sbjct: 698 VVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGL 757
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD L+ SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 758 ITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 799
>K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria italica
GN=Si005787m.g PE=3 SV=1
Length = 966
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/702 (56%), Positives = 525/702 (74%), Gaps = 21/702 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
++ L++RQ+K ETEAW AA EY+E+ +M ++LAP LPY+KSLF+GWFEPLR+AI +
Sbjct: 131 HRRLRQRQVKAETEAWARAAEEYREIEREMLDRRLAPALPYVKSLFVGWFEPLRDAIARD 190
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q++ + R++ + Y LPAD +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+
Sbjct: 191 QDVQRRKRVKHVYAKYLLLLPADKIAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAV 250
Query: 273 EHEARIYRFMEKTKKKTKATDNCEG-ESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
E E ++ F +K++KK +N + E + A +K
Sbjct: 251 EREFKVQSFFQKSRKKKDQGENDQALEMEQAKCRK--------------------RVKTL 290
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
+K +A +V+ + + WG EAQVK+GS L++LL+D+A++QPPA+Q D PDIRP
Sbjct: 291 VRRRKMTEAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRP 350
Query: 392 AFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
AF+H L+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG
Sbjct: 351 AFRHVLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKG 410
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
+LFLPSY+MR HG K Q+DA+K P QL VFEAL+ LGSTKWRVN+RV V++ IW+
Sbjct: 411 GHLFLPSYIMRTHGVKDQKDAIKSVPRKQLQKVFEALDILGSTKWRVNRRVHDVVETIWS 470
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
+GGG+A LVD+ ++PLPE ++ED E++KWKWS+K +K N E H++RCD ELKL+VAR
Sbjct: 471 RGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVAR 530
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KM++EDGFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLA
Sbjct: 531 KMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLA 590
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N Y GGV+KL ++G++AF EN L DIFDSA P++G RWW AEDPFQCLAAC++L++AL
Sbjct: 591 NKYGGGVEKLSHEGKLAFVENQLLDIFDSAANPVDGNRWWTNAEDPFQCLAACMDLSDAL 650
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
+S +P +SH+P+HQDGSCNGLQHYAALGRD +GA VNL+ G++PAD+YS IA RVL+
Sbjct: 651 KSSSPYRAVSHLPIHQDGSCNGLQHYAALGRDYMGAVVVNLVPGEKPADIYSEIAARVLD 710
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
++R D+ KDP TNPNA AR L++QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+
Sbjct: 711 VVREDSMKDPATNPNASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGL 770
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD L+ SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 771 ITDDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 812
>M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401001383 PE=4 SV=1
Length = 672
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/656 (63%), Positives = 497/656 (75%), Gaps = 20/656 (3%)
Query: 97 RGYASVAEAI--ESSDAEYDYSA--SXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYK 152
+ YASVAEA+ S+DAE D S + G+ K
Sbjct: 33 KSYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRNQRLLTSGIDRRK 92
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y LK+RQ+K+ET+AWE AA+EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR+ I E
Sbjct: 93 YPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQE 152
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
QELC + + + YF+ LPADMMAVITMHKLMGLLMT G+A+VVQ A IG+AI
Sbjct: 153 QELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEH-GNARVVQAALTIGDAI 211
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E RI++F+EKT+K D + + A +++
Sbjct: 212 EQEVRIHKFLEKTEKHKAEKDRKMEDGEHATLEQ---------------KKLHKKVTSLM 256
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
QK + IVR +DD KPWGQ+A+ KVGS L++ L+ TAYIQ PA+Q+ PPDIRPA
Sbjct: 257 KKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPA 316
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
F H+ + ++ ++++ S+RYGVI+CD LV +GLE++ARHMVIPYMPMLVPP WTGYDKG
Sbjct: 317 FIHSTRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGG 376
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+L+LPSYVMR HGA+QQR+AVKRA QL PVFEAL+TLGSTKWR+NKRVLSV+D+IWA
Sbjct: 377 HLYLPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAG 436
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GG LADLVDR D PLPEE DTEDEA KW+W VK+V+KEN ERHSQRCDIELKLAVA +
Sbjct: 437 GGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHR 496
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
MKDE+GF+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEF GRPLG+SGL WLKIHLAN
Sbjct: 497 MKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLAN 556
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
L+AGGVDKL DGRIAFTE+HLDDIFDSA+KPLEG+RWWL AEDPFQCLA CINL+EA+R
Sbjct: 557 LFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVR 616
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
S +PET +SH+PVHQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGIA R
Sbjct: 617 SSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 672
>I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 949
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/702 (56%), Positives = 524/702 (74%), Gaps = 20/702 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
+++ L++RQ+K ETEAW AA EY+EL +M ++LAP LPY+KSLFLGWFEPLR+AI
Sbjct: 114 EHRRLRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIAR 173
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
+QE+ + R++ + Y LPAD +AVI MHK+MGLLM++ +GV S +VVQ A IGEA
Sbjct: 174 DQEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEA 233
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
+E E ++ F +KT+KK+ ++ E + A +K
Sbjct: 234 VEREFKVQTFFQKTRKKSAGENDLALEKEQAKCRK--------------------RVKSL 273
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
+K +A IV+ + + WG E+QVK+G+ L++LL+D+A++Q PA+Q + PDIRP
Sbjct: 274 VRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRP 333
Query: 392 AFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
AFKH L+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLV P W GYD G
Sbjct: 334 AFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTG 393
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
Y FLPSY+MR HG K Q++A+K P QL VFEAL+TLGSTKWRVN+RV + ++ IW+
Sbjct: 394 GYFFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIWS 453
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
+GGG+A LVD++++PLPE +TED +I+KWKWS+K +K N E H++RCD ELKL+VAR
Sbjct: 454 RGGGIAGLVDKENIPLPERPETEDPDKIQKWKWSLKKAKKANRELHAERCDTELKLSVAR 513
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KM++EDGFYYPHNLDFRGRAYPMH +L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLA
Sbjct: 514 KMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLA 573
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N Y GG++KL ++ ++AF EN L DIFDSA P++G WW+ AEDPFQCLAAC++L++AL
Sbjct: 574 NKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDAL 633
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
+S +P+ +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ GD+PAD+YS IA RVL+
Sbjct: 634 KSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAARVLD 693
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
++R D+ +DP TNP A AR L++QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+
Sbjct: 694 VVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGL 753
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD L+ SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 754 ITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 795
>I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 943
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/696 (57%), Positives = 520/696 (74%), Gaps = 19/696 (2%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK 217
+RQ+K ETEAW AA EY++L +M + LAP+LPY+KSLFLGWFEPLR+AI +QE+ +
Sbjct: 113 QRQVKAETEAWARAAEEYRQLEREMLDRNLAPSLPYVKSLFLGWFEPLRDAIARDQEVQR 172
Query: 218 DTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEAR 277
R++ + Y LPA+ ++VI MHK+MGLLM+N +G GS +VVQ A IGEA+E E +
Sbjct: 173 RKRVKHVYAKYLLLLPAEKVSVIVMHKMMGLLMSNKDGCGSVRVVQAAHSIGEAVEREFK 232
Query: 278 IYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKN 337
+ F +KT+KK K GE+D A K+ +K
Sbjct: 233 VQAFFQKTRKKGK-----NGENDPALGKE--------------QAKCRKLVKSLVKRRKL 273
Query: 338 QQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTL 397
+A +V+ + + WG EAQVK+G+ L++LL+D+A++Q PA+QI D PD RPAFKH L
Sbjct: 274 TEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPAFKHVL 333
Query: 398 KNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLP 457
+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG +LFLP
Sbjct: 334 RKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLP 393
Query: 458 SYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
SYVMR HG K Q++A+K P QL VFEAL+ LG TKWRVN+RV V++ IW++GGG+A
Sbjct: 394 SYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIA 453
Query: 518 DLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDED 577
LVD+ D+PLPE ++ED EI+KWKWS+K +K N E H++RCD ELKL+VARKM++ED
Sbjct: 454 GLVDKGDIPLPERPESEDPDEIQKWKWSLKKAKKINRELHAERCDTELKLSVARKMREED 513
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
GFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG
Sbjct: 514 GFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGG 573
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
++KL + ++AF ENHL DIFDSA P++G RWW+ AEDPFQCLAAC++L+ AL+S +P
Sbjct: 574 IEKLSHGSKLAFVENHLPDIFDSAANPVDGNRWWINAEDPFQCLAACVDLSNALKSSSPH 633
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
T +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ G++PAD+YS IA RVL+++R D+
Sbjct: 634 TAISHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDVVREDS 693
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQ 817
KDP T+ + A+ L++QVDRKLVKQTVMTSVYGVT+IGAR QI +RL+E+ I DD
Sbjct: 694 MKDPATDASVSLAKVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKL 753
Query: 818 LFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
L+ SCYA + TL AL +MF++AR+IM WLGDCAK+
Sbjct: 754 LYEVSCYATRVTLDALGQMFQSARAIMAWLGDCAKM 789
>K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 884
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/707 (57%), Positives = 519/707 (73%), Gaps = 26/707 (3%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K +L++RQIK ETEA E EY+EL +MR++ L PNLP++K+LFLGWF+PL+ AI A
Sbjct: 111 KLNLLRRRQIKAETEALEKMVEEYRELEREMREKNLTPNLPHVKALFLGWFDPLKEAIEA 170
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ+ + + + P+ + LPA +AVI MHK+MGL+ G +V A QIG A
Sbjct: 171 EQKSKRSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGLVTQEYRRAGCVLLVDAAVQIGMA 230
Query: 272 IEHEARIYRFMEKTK----KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXX 327
+E E RI++F+EKT+ KKT+A D ++D ++K
Sbjct: 231 VEQEVRIHKFLEKTRSHQSKKTEAGDEDSMDNDKQKLRK--------------------- 269
Query: 328 XXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPP 387
++ + + ++ + PWG++ Q K+GS L++LLI+TA++ P NQ D PP
Sbjct: 270 HVNGLIKRRRLKQVQMLLKEKESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPP 329
Query: 388 DIRPAFKHTLKNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
DIRPAF+H K IS + Q K YGVIECD LV G++KS +HM++PYMPMLVPP W
Sbjct: 330 DIRPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWK 389
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GY+KG +LFLPSY+MR HG+K+Q+D +K Q+ VFEAL+TLG+TKWRVN+R+L+V+
Sbjct: 390 GYEKGGHLFLPSYIMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLNVV 449
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+ +WA GG +A L+DRKDVP+PE D +I++WKWSV+ K N ERHS RCD ELK
Sbjct: 450 ESLWAGGGNIAGLIDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTELK 509
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VA+KMKDE+GFYYPHN+DFRGRAYPMH +LNHL DLCRG+LEF EGRPLG+SGL WL
Sbjct: 510 LSVAQKMKDEEGFYYPHNVDFRGRAYPMHSHLNHLSCDLCRGLLEFAEGRPLGESGLCWL 569
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGG++KL YDGR+AF ENHL DIFDSA+ P+ G RWWL A+DPFQCLAACIN
Sbjct: 570 KIHLANLYAGGIEKLSYDGRLAFVENHLHDIFDSADNPINGNRWWLMADDPFQCLAACIN 629
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L+EALRS +P + + H+P+HQDGSCNGLQHYAALGRD L AAAVNL+ ++PADVYS IA
Sbjct: 630 LSEALRSSSPNSVILHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVASEKPADVYSEIA 689
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV +IMR+D KDP PNAL A+ LI+Q+DRKLVKQTVMTSVYGVT++GAR+QIKRRL
Sbjct: 690 VRVHDIMRKDCIKDPAAYPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFVGAREQIKRRL 749
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CYAAK TLTAL E+F AAR IMGWLGDCAKV
Sbjct: 750 EEKGLITDEKLLFAAACYAAKVTLTALGEIFGAARVIMGWLGDCAKV 796
>I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 915
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/696 (57%), Positives = 520/696 (74%), Gaps = 19/696 (2%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK 217
+RQ+K ETEAW AA EY++L +M + LAP+LPY+KSLFLGWFEPLR+AI +QE+ +
Sbjct: 113 QRQVKAETEAWARAAEEYRQLEREMLDRNLAPSLPYVKSLFLGWFEPLRDAIARDQEVQR 172
Query: 218 DTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEAR 277
R++ + Y LPA+ ++VI MHK+MGLLM+N +G GS +VVQ A IGEA+E E +
Sbjct: 173 RKRVKHVYAKYLLLLPAEKVSVIVMHKMMGLLMSNKDGCGSVRVVQAAHSIGEAVEREFK 232
Query: 278 IYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKN 337
+ F +KT+KK K GE+D A K+ +K
Sbjct: 233 VQAFFQKTRKKGK-----NGENDPALGKE--------------QAKCRKLVKSLVKRRKL 273
Query: 338 QQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTL 397
+A +V+ + + WG EAQVK+G+ L++LL+D+A++Q PA+QI D PD RPAFKH L
Sbjct: 274 TEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPAFKHVL 333
Query: 398 KNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLP 457
+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG +LFLP
Sbjct: 334 RKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLP 393
Query: 458 SYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
SYVMR HG K Q++A+K P QL VFEAL+ LG TKWRVN+RV V++ IW++GGG+A
Sbjct: 394 SYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIA 453
Query: 518 DLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDED 577
LVD+ D+PLPE ++ED EI+KWKWS+K +K N E H++RCD ELKL+VARKM++ED
Sbjct: 454 GLVDKGDIPLPERPESEDPDEIQKWKWSLKKAKKINRELHAERCDTELKLSVARKMREED 513
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
GFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG
Sbjct: 514 GFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGG 573
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
++KL + ++AF ENHL DIFDSA P++G RWW+ AEDPFQCLAAC++L+ AL+S +P
Sbjct: 574 IEKLSHGSKLAFVENHLPDIFDSAANPVDGNRWWINAEDPFQCLAACVDLSNALKSSSPH 633
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
T +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ G++PAD+YS IA RVL+++R D+
Sbjct: 634 TAISHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDVVREDS 693
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQ 817
KDP T+ + A+ L++QVDRKLVKQTVMTSVYGVT+IGAR QI +RL+E+ I DD
Sbjct: 694 MKDPATDASVSLAKVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKL 753
Query: 818 LFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
L+ SCYA + TL AL +MF++AR+IM WLGDCAK+
Sbjct: 754 LYEVSCYATRVTLDALGQMFQSARAIMAWLGDCAKM 789
>K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 973
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/706 (58%), Positives = 517/706 (73%), Gaps = 24/706 (3%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY +L++RQI+ ETEAWE EY+EL +MR++ LAPNLP++KSL LGWFEP R A+ A
Sbjct: 134 KYNLLRRRQIEAETEAWEKMVEEYRELEREMREKMLAPNLPHVKSLLLGWFEPFRAAVEA 193
Query: 212 EQ--ELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ + + + + P+ ++LPAD +AVI MHK+M ++M N G ++V A IG
Sbjct: 194 EQTAHRARPKKQQDSIAPHVDDLPADKVAVIVMHKMMAMVMENEEGC--VQLVHAAVHIG 251
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
A+E E RI++F+E K + E L K+
Sbjct: 252 MALEQEVRIHKFVEGNKSSQSKKTEGDAEDSLDSDKE------------------KQRNY 293
Query: 330 XXXXXQKNQ-QALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPD 388
+KN+ + + ++ +++ PW ++ Q K+GS L++LLIDTAY+ P NQ D PPD
Sbjct: 294 LNSLLKKNRLREVQMILRKEECSPWSRDTQAKLGSRLVELLIDTAYVHSPVNQSADTPPD 353
Query: 389 IRPAFKHTLKNIS-TDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTG 447
IRPAF+H K + Q SK+YG+I+CD LV GLEK A+HM+IPYMPML+PP W G
Sbjct: 354 IRPAFRHGFKAVPWHPGQKFSKKYGIIQCDPLVLVGLEKCAKHMLIPYMPMLIPPKKWKG 413
Query: 448 YDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVID 507
YDKG +LFLPSY+MR HG+K+Q+D +K Q+ VFEAL+ LG+TKWRVN+RVL V++
Sbjct: 414 YDKGGHLFLPSYIMRTHGSKKQQDVMKNVDGAQMQKVFEALDILGNTKWRVNRRVLGVVE 473
Query: 508 QIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
IWA GG +A LVD KDVP P++ ED I++WK +V+ +K N ERHS RCD ELKL
Sbjct: 474 SIWAGGGNIAGLVDCKDVPKPDKPLVEDLKLIQEWKCNVRKAKKINLERHSLRCDTELKL 533
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEF EGRPLGKSGL WLK
Sbjct: 534 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 593
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHLANLYAGG++K YDGR+ F E+H+ DIFDSA+ P+ G RWWL AEDPFQCLAACINL
Sbjct: 594 IHLANLYAGGIEKQSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINL 653
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
+EALRS +P + +SH+P+HQDGSCNGLQHYAALGRD L AAAVNL+ ++PADVY+ IA
Sbjct: 654 SEALRSSSPNSFISHLPIHQDGSCNGLQHYAALGRDDLEAAAVNLVAKEKPADVYTEIAV 713
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
RV +IMR+D+ KDP T PNAL A+ LI+Q+DRKLVKQTVMTSVYGVTYIGAR+QIKRRL
Sbjct: 714 RVYDIMRQDSNKDPDTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLG 773
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
E+ + DD L+ ASCYAAK TL AL E+FEAAR IMGWLGDCAKV
Sbjct: 774 EKGFVTDDRLLYAASCYAAKVTLAALGEVFEAARGIMGWLGDCAKV 819
>I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=2
Length = 951
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/707 (57%), Positives = 519/707 (73%), Gaps = 26/707 (3%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K +L++RQIK ETEA E EY+EL +MR++ L PNLP++K+LFLGWF+PL+ AI A
Sbjct: 111 KLNLLRRRQIKAETEALEKMVEEYRELEREMREKNLTPNLPHVKALFLGWFDPLKEAIEA 170
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ+ + + + P+ + LPA +AVI MHK+MGL+ G +V A QIG A
Sbjct: 171 EQKSKRSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGLVTQEYRRAGCVLLVDAAVQIGMA 230
Query: 272 IEHEARIYRFMEKTK----KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXX 327
+E E RI++F+EKT+ KKT+A D ++D ++K
Sbjct: 231 VEQEVRIHKFLEKTRSHQSKKTEAGDEDSMDNDKQKLRK--------------------- 269
Query: 328 XXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPP 387
++ + + ++ + PWG++ Q K+GS L++LLI+TA++ P NQ D PP
Sbjct: 270 HVNGLIKRRRLKQVQMLLKEKESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPP 329
Query: 388 DIRPAFKHTLKNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
DIRPAF+H K IS + Q K YGVIECD LV G++KS +HM++PYMPMLVPP W
Sbjct: 330 DIRPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWK 389
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GY+KG +LFLPSY+MR HG+K+Q+D +K Q+ VFEAL+TLG+TKWRVN+R+L+V+
Sbjct: 390 GYEKGGHLFLPSYIMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLNVV 449
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+ +WA GG +A L+DRKDVP+PE D +I++WKWSV+ K N ERHS RCD ELK
Sbjct: 450 ESLWAGGGNIAGLIDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTELK 509
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VA+KMKDE+GFYYPHN+DFRGRAYPMH +LNHL DLCRG+LEF EGRPLG+SGL WL
Sbjct: 510 LSVAQKMKDEEGFYYPHNVDFRGRAYPMHSHLNHLSCDLCRGLLEFAEGRPLGESGLCWL 569
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGG++KL YDGR+AF ENHL DIFDSA+ P+ G RWWL A+DPFQCLAACIN
Sbjct: 570 KIHLANLYAGGIEKLSYDGRLAFVENHLHDIFDSADNPINGNRWWLMADDPFQCLAACIN 629
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L+EALRS +P + + H+P+HQDGSCNGLQHYAALGRD L AAAVNL+ ++PADVYS IA
Sbjct: 630 LSEALRSSSPNSVILHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVASEKPADVYSEIA 689
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV +IMR+D KDP PNAL A+ LI+Q+DRKLVKQTVMTSVYGVT++GAR+QIKRRL
Sbjct: 690 VRVHDIMRKDCIKDPAAYPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFVGAREQIKRRL 749
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CYAAK TLTAL E+F AAR IMGWLGDCAKV
Sbjct: 750 EEKGLITDEKLLFAAACYAAKVTLTALGEIFGAARVIMGWLGDCAKV 796
>M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004010 PE=3 SV=1
Length = 902
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/702 (58%), Positives = 512/702 (72%), Gaps = 61/702 (8%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY LK+RQ+++ETE WE AARE +E++EDM +QKLAPNLPY+KSLFLGWFEPLR+AI A
Sbjct: 108 KYHSLKQRQVRLETEEWERAARECREIIEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIRA 167
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
+ + K R ++ + PY LPADMMAVITMHK+M LLMTN GVG +VV A+ +GEA
Sbjct: 168 DLDAFKVKRGKIPYAPYMELLPADMMAVITMHKMMALLMTNAEGVGVVRVVNAATNVGEA 227
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
IE EARI FM+K K K AT N E L
Sbjct: 228 IEQEARIKSFMQKGKMKN-ATSNTEAVDALG------------ETGTKEAVKLKKQINTL 274
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
K ++ GIV+ D +KPWGQEAQVKVG+ L+QLL++TAYIQPPA Q DGPP+IRP
Sbjct: 275 LKKHKVRRVSGIVKAHDSFKPWGQEAQVKVGARLIQLLLETAYIQPPAEQFDDGPPEIRP 334
Query: 392 AFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKG 451
AFK T KN++ ++ S+RYG IECD L+++GL+KSARH+VIPY+PML+PP NWTGYD+G
Sbjct: 335 AFKQTSKNVTLENTKLSRRYGCIECDPLIRKGLDKSARHVVIPYLPMLIPPRNWTGYDQG 394
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWA 511
A+ FLPSY+MR +G+KQQR V + P QL PVF+AL+TLG+TKWR+NK+VLS++D+IWA
Sbjct: 395 AHFFLPSYLMRTNGSKQQRIVVNKTPKAQLEPVFKALDTLGNTKWRINKKVLSLVDRIWA 454
Query: 512 KGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
GG L LVDR DVP+PEE D ED+ E+++WKW K KEN+ERHSQRCD+ELKL VAR
Sbjct: 455 NGGRLGGLVDRDDVPIPEEPDGEDQEELKQWKWKFKEANKENSERHSQRCDVELKLEVAR 514
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
KMK+E+GFY+PHN+DFRGRAYPMHPYLNHLGSDLCRGILEF EG+PLG+SGL WLK+H+A
Sbjct: 515 KMKEEEGFYFPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKVHIA 574
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
NLYAGGVDK G ++ AL
Sbjct: 575 NLYAGGVDK----GSLS-----------------------------------------AL 589
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RS PE +SH+P+HQDGSCNGLQHYAALGRDK GAAAVNL G++PAD+Y+ IA RVL+
Sbjct: 590 RSSVPEAAISHIPIHQDGSCNGLQHYAALGRDKTGAAAVNLFTGEKPADIYADIAARVLK 649
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
IM++DAE+DP+T P +A+ +++QVDRKLVKQTVMT+VYGVTY GAR+QIK+RLKER A
Sbjct: 650 IMQKDAEEDPETFP---YAKLMLDQVDRKLVKQTVMTTVYGVTYSGARNQIKKRLKERGA 706
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DD+Q F A+ YAA+ T AL+EMF AAR+IM W G+CAK+
Sbjct: 707 FADDSQNFHAAYYAARVTTNALEEMFGAARAIMIWFGECAKI 748
>Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=2 SV=1
Length = 948
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/701 (56%), Positives = 524/701 (74%), Gaps = 16/701 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
++ L++RQ+K ETEAW AA EY++L +M + LAP LPY+KSLFLGWFEPLR+A+ +
Sbjct: 110 HRRLRQRQVKAETEAWARAAEEYRQLEREMLDRNLAPQLPYVKSLFLGWFEPLRDAVARD 169
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q++ + R++ + Y LP + +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+
Sbjct: 170 QDVQRRKRVKHVYAKYLLLLPPEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAV 229
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E ++ F +KT++KT++ + E E+D A K+
Sbjct: 230 EREYKVQAFFQKTRRKTRSKN--ESENDPALDKE--------------QAKCRKLVKSLV 273
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K +A +V+ + + WG EAQVK+G+ L++LL+D+A++Q PANQ D PD RPA
Sbjct: 274 RRRKLTEAQKLVQQEIELEEWGAEAQVKLGTRLIELLLDSAFVQSPANQTPDNSPDFRPA 333
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FKH L+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG
Sbjct: 334 FKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGG 393
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+LFLPSYVMR HG K Q++A+K P QL VFEAL+ LG TKWRVN+RV V++ IW++
Sbjct: 394 HLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSR 453
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GGG+A LVD++++PLPE +TED EI+KW+WSVK +K N E H++RCD ELKL+VARK
Sbjct: 454 GGGIAGLVDKENIPLPERPETEDPDEIQKWRWSVKKTKKTNRELHAERCDTELKLSVARK 513
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
M++EDGFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+GEGRPLGKSGL WLKIHLAN
Sbjct: 514 MREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYGEGRPLGKSGLRWLKIHLAN 573
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
Y GG++KL ++ ++AF E+ L IFDSA P++G WW+ AEDPFQCLAACI+L++AL+
Sbjct: 574 KYGGGIEKLTHESKLAFVEDRLPAIFDSAANPVDGNCWWINAEDPFQCLAACIDLSDALK 633
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
S +P +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ G++PAD+YS IA RVL +
Sbjct: 634 SSSPHAAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLNV 693
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
+R D+ KDP T+P+ AR L++QVDRKLVKQTVMTSVYGVT+IGAR QI +RL+E+ I
Sbjct: 694 VREDSMKDPATDPSVPLARVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHI 753
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
D+ L+ SCYAA+ TL AL +MF++AR IM WLGDCAK+
Sbjct: 754 TDEKLLYDVSCYAARVTLDALGQMFQSARGIMAWLGDCAKM 794
>Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=2
Length = 949
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/701 (55%), Positives = 520/701 (74%), Gaps = 16/701 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
++ L++RQ+K ETEAW AA EY++L +M + LAP LPY+KSLFLGWFEPLR+A+ +
Sbjct: 111 HRRLRQRQVKAETEAWARAAEEYRQLEGEMLDRHLAPQLPYVKSLFLGWFEPLRDAVARD 170
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q++ + R++ + Y LPA+ +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+
Sbjct: 171 QDVQRRKRVKHVYAKYLLLLPAEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAV 230
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E ++ F +KT++KT++ E + L
Sbjct: 231 EREYKVQAFFQKTRRKTRSKTESENDPGL----------------DKEQAKCRKLVKSLV 274
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K+ +A +V+ + + WG EAQVK+G+ L++LL+D+A++Q PA+Q D PD RPA
Sbjct: 275 RRRKSTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQTPDSSPDFRPA 334
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FKH L+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG
Sbjct: 335 FKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGG 394
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+LFLPSYVMR HG K Q++A+K P QL VFEAL+ LG TKWRVN+RV V++ IW++
Sbjct: 395 HLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSR 454
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GGG+A LVD+ ++PLPE+ +TED EI+KWKWSVK +K N E H++RCD ELKL+VARK
Sbjct: 455 GGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKANRELHAERCDTELKLSVARK 514
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
M++EDGFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN
Sbjct: 515 MREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLAN 574
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
Y GG++KL ++ ++ F E+HL DIFDSA P++G WW+ AEDPFQCLAAC++L+ AL
Sbjct: 575 KYGGGIEKLSHESKLTFVEDHLPDIFDSAANPVDGNCWWINAEDPFQCLAACMDLSNALE 634
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
S +P +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ G++PAD+YS IA RVL++
Sbjct: 635 SSSPHGAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDV 694
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
+R D+ KDP T+P+ A+ L+++VDRKLVKQTVMTSVYGVT+IGAR QI +RL+E+ I
Sbjct: 695 VREDSMKDPATDPSVPLAKVLVDEVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHI 754
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DD L+ SCYA + TL AL +MF++AR+IM WLGDCAK+
Sbjct: 755 TDDKLLYDVSCYATRVTLDALGQMFQSARAIMAWLGDCAKM 795
>Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=3 SV=1
Length = 948
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/701 (56%), Positives = 523/701 (74%), Gaps = 16/701 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
++ L++RQ+K ETEAW AA EY++L +M + LAP LPY+KSLFLGWFEPLR+A+ +
Sbjct: 110 HRRLRQRQVKAETEAWARAAEEYRQLEREMLDRNLAPQLPYVKSLFLGWFEPLRDAVARD 169
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q++ + R++ + Y LP + +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+
Sbjct: 170 QDVQRRKRVKHVYAKYLLLLPPEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAV 229
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E ++ F +KT++KT++ + E E+D A K+
Sbjct: 230 EREYKVQAFFQKTRRKTRSKN--ESENDPALDKE--------------QAKCRKLVKSLV 273
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K +A +V+ + + WG EAQVK+G+ L++LL+D+A++Q PANQ D PD RPA
Sbjct: 274 RRRKLTEAQKLVQQEIELEEWGAEAQVKLGTRLIELLLDSAFVQSPANQTPDNSPDFRPA 333
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FKH L+ ++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG
Sbjct: 334 FKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGG 393
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+LFLPSYVMR HG K Q++A+K P QL VFEAL+ LG TKWRVN+RV V++ IW++
Sbjct: 394 HLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSR 453
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GGG+A LVD++++PLPE +TED EI+KW+WSVK +K N E H++RCD ELKL+VARK
Sbjct: 454 GGGIAGLVDKENIPLPERPETEDPDEIQKWRWSVKKTKKTNRELHAERCDTELKLSVARK 513
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
M++EDGFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+GEGRPLGKSGL WLKIHLAN
Sbjct: 514 MREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYGEGRPLGKSGLRWLKIHLAN 573
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
Y GG++KL ++ ++AF E+ L IFDSA P++G WW+ AED FQCLAACI+L++AL+
Sbjct: 574 KYGGGIEKLTHESKLAFVEDRLPAIFDSAANPVDGNCWWINAEDSFQCLAACIDLSDALK 633
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
S +P +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ G++PAD+YS IA RVL +
Sbjct: 634 SSSPHAAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLNV 693
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
+R D+ KDP T+P+ AR L++QVDRKLVKQTVMTSVYGVT+IGAR QI +RL+E+ I
Sbjct: 694 VREDSMKDPATDPSVPLARVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHI 753
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
D+ L+ SCYAA+ TL AL +MF++AR IM WLGDCAK+
Sbjct: 754 TDEKLLYDVSCYAARVTLDALGQMFQSARGIMAWLGDCAKM 794
>Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays GN=rpoT2 PE=2
SV=1
Length = 952
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/693 (57%), Positives = 516/693 (74%), Gaps = 19/693 (2%)
Query: 161 IKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTR 220
+K ETEAW AA EY+E+ +M ++LAP LPY+K+LF+GWFEPLR+AI +Q++ + R
Sbjct: 125 VKAETEAWARAAEEYREIEREMLDRRLAPALPYVKALFVGWFEPLRDAIARDQDVQRRKR 184
Query: 221 LRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYR 280
++ + Y LPAD +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+E E ++
Sbjct: 185 VKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVEREFKVQS 244
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
F +K++KK +GE+D A K+ +K +A
Sbjct: 245 FFQKSRKK-----KIQGENDPALEKE--------------QAKCRKRVKSLVKRRKMSEA 285
Query: 341 LGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNI 400
+V+ + + WG EAQVK+GS L++LL+D+A++QPPA+Q D PDIRPAFKH L+
Sbjct: 286 QRLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFKHVLRQP 345
Query: 401 STDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYV 460
++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG +LFLPSY+
Sbjct: 346 IIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYI 405
Query: 461 MRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
MR HG K Q+DA+ P QL VFEAL+ LGSTKWRVN+RV V++ IW++GGG+A LV
Sbjct: 406 MRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSQGGGIAGLV 465
Query: 521 DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFY 580
D+ ++PLPE ++ED E++KWKWS+K +K N E H++RCD ELKL+VARKM++EDGFY
Sbjct: 466 DKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMREEDGFY 525
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
YPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG++K
Sbjct: 526 YPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYGGGIEK 585
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
L ++G++AF EN L DIFDSA P++G WW AEDPFQCLAAC++L++ALRSP+P +
Sbjct: 586 LSHEGKLAFVENQLFDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALRSPSPYHAV 645
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
SH+P+HQDGSCNGLQHYAALGRD +GA AVNL+ G++PAD+YS IA+RVL ++ D+ KD
Sbjct: 646 SHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIASRVLNVVCEDSMKD 705
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFG 820
P TNP A AR L++QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+ I DD L+
Sbjct: 706 PATNPTASLARALVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYD 765
Query: 821 ASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 766 VSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 798
>A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_23934 PE=3 SV=1
Length = 950
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/727 (54%), Positives = 525/727 (72%), Gaps = 45/727 (6%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
+++ L++RQ+K ETEAW AA EY+EL +M ++LAP LPY+KSLFLGWFEPLR+AI
Sbjct: 90 EHRRLRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIAR 149
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
+QE+ + R++ + Y LPAD +AVI MHK+MGLLM++ +GV S +VVQ A IGEA
Sbjct: 150 DQEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEA 209
Query: 272 IEHEAR-------------------------IYRFMEKTKKKTKATDNCEGESDLAPVKK 306
+E E R + F +KT+KK+ ++ E + A +K
Sbjct: 210 VERENRLNNVEALDSLALYTTDRCVRSWNFKVQTFFQKTRKKSAGENDLALEKEQAKCRK 269
Query: 307 GXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLM 366
+K +A IV+ + + WG E+QVK+G+ L+
Sbjct: 270 --------------------RVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLI 309
Query: 367 QLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEK 426
+LL+D+A++Q PA+Q + PDIRPAFKH L+ ++ K++ VIECD LV +G E
Sbjct: 310 ELLLDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFES 369
Query: 427 SARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFE 486
+ARH+ IPY+PMLV P W GYD G YLFLPSY+MR HG K Q++A+K P QL VFE
Sbjct: 370 TARHVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFE 429
Query: 487 ALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSV 546
AL+TLGSTKWRVN+RV + ++ IW++GGG+A LVD++++PLPE +TED EI+KWKWS+
Sbjct: 430 ALDTLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSL 489
Query: 547 KNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 606
K +K N E H++RCD ELKL+VARKM++EDGFYYPHNLDFRGRAYPMH +L+HLGSDLC
Sbjct: 490 KKAKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLC 549
Query: 607 RGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLE 666
RG+LE+ EGRPLGKSGL WLKIHLAN Y GG++KL ++ ++AF EN L DIFDSA P++
Sbjct: 550 RGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVD 609
Query: 667 GKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLG 726
G WW+ AEDPFQCLAAC++L++AL+S +P+ +SH+P+HQDGSCNGLQHYAALGRD +G
Sbjct: 610 GNCWWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMG 669
Query: 727 AAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTV 786
AAAVNL+ GD+PAD+YS IA RVL+++R D+ +DP TNP A AR L++QVDRKLVKQTV
Sbjct: 670 AAAVNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTV 729
Query: 787 MTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGW 846
MTSVYGVTYIGAR QI +RL+E+ I DD L+ SCYA + TL AL +MF++AR IM W
Sbjct: 730 MTSVYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAW 789
Query: 847 LGDCAKV 853
LGDCAK+
Sbjct: 790 LGDCAKM 796
>B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_22187 PE=3 SV=1
Length = 946
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/726 (54%), Positives = 524/726 (72%), Gaps = 45/726 (6%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
++ L++RQ+K ETEAW AA EY+EL +M ++LAP LPY+KSLFLGWFEPLR+AI +
Sbjct: 87 HRRLRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARD 146
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
QE+ + R++ + Y LPAD +AVI MHK+MGLLM++ +GV S +VVQ A IGEA+
Sbjct: 147 QEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAV 206
Query: 273 EHEAR-------------------------IYRFMEKTKKKTKATDNCEGESDLAPVKKG 307
E E R + F +KT+KK+ ++ E + A +K
Sbjct: 207 ERENRLNNVEALDSLALYTTDRCVRSWNFKVQTFFQKTRKKSAGENDLALEKEQAKCRK- 265
Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQ 367
+K +A IV+ + + WG E+QVK+G+ L++
Sbjct: 266 -------------------RVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIE 306
Query: 368 LLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKS 427
LL+D+A++Q PA+Q + PDIRPAFKH L+ ++ K++ VIECD LV +G E +
Sbjct: 307 LLLDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFEST 366
Query: 428 ARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEA 487
ARH+ IPY+PMLV P W GYD G YLFLPSY+MR HG K Q++A+K P QL VFEA
Sbjct: 367 ARHVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEA 426
Query: 488 LNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVK 547
L+TLGSTKWRVN+RV + ++ IW++GGG+A LVD++++PLPE +TED EI+KWKWS+K
Sbjct: 427 LDTLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLK 486
Query: 548 NVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 607
+K N E H++RCD ELKL+VARKM++EDGFYYPHNLDFRGRAYPMH +L+HLGSDLCR
Sbjct: 487 KAKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCR 546
Query: 608 GILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEG 667
G+LE+ EGRPLGKSGL WLKIHLAN Y GG++KL ++ ++AF EN L DIFDSA P++G
Sbjct: 547 GVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDG 606
Query: 668 KRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGA 727
WW+ AEDPFQCLAAC++L++AL+S +P+ +SH+P+HQDGSCNGLQHYAALGRD +GA
Sbjct: 607 NCWWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGA 666
Query: 728 AAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVM 787
AAVNL+ GD+PAD+YS IA RVL+++R D+ +DP TNP A AR L++QVDRKLVKQTVM
Sbjct: 667 AAVNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVM 726
Query: 788 TSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWL 847
TSVYGVTYIGAR QI +RL+E+ I DD L+ SCYA + TL AL +MF++AR IM WL
Sbjct: 727 TSVYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWL 786
Query: 848 GDCAKV 853
GDCAK+
Sbjct: 787 GDCAKM 792
>O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays GN=RpoT PE=3
SV=1
Length = 952
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/693 (57%), Positives = 516/693 (74%), Gaps = 19/693 (2%)
Query: 161 IKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTR 220
+K ETEAW AA EY+E+ +M ++LAP LPY+K+LF+GWFEPLR+AI +Q++ + R
Sbjct: 125 VKAETEAWARAAEEYREIEREMLDRRLAPALPYVKALFVGWFEPLRDAIARDQDVQRRKR 184
Query: 221 LRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYR 280
++ + Y LPAD +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+E E ++
Sbjct: 185 VKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVEREFKVQS 244
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
F +K++KK +GE+D A K+ +K +A
Sbjct: 245 FFQKSRKK-----KIQGENDPALEKE--------------QAKCRKRVKSLVKRRKMSEA 285
Query: 341 LGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNI 400
+V+ + + WG EAQVK+GS L++LL+D+A++QPPA+Q D PDIRPAFKH L+
Sbjct: 286 QRLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFKHVLRQP 345
Query: 401 STDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYV 460
++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYDKG +LFLPSY+
Sbjct: 346 IIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYI 405
Query: 461 MRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
MR HG K Q+DA+ P QL VFEAL+ LGSTKWRVN+RV V++ IW++GGG+A LV
Sbjct: 406 MRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSQGGGIAGLV 465
Query: 521 DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFY 580
D+ ++PLPE ++ED E++KWKWS+K +K N E H++RCD ELKL+VARKM++EDGFY
Sbjct: 466 DKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMREEDGFY 525
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
YPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG++K
Sbjct: 526 YPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYGGGIEK 585
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
L ++G++AF EN L DIFDSA P++G WW AEDPFQCLAAC++L++ALRSP+P +
Sbjct: 586 LSHEGKLAFVENQLFDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALRSPSPYHAV 645
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
SH+P+HQDGSCNGLQHYAALGRD +GA AVNL+ G++PAD+YS IA+RVL ++ D+ KD
Sbjct: 646 SHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIASRVLNVVCEDSMKD 705
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFG 820
P TNP A AR L++QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+ I DD L+
Sbjct: 706 PATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYD 765
Query: 821 ASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 766 VSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 798
>J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) OS=Oryza
brachyantha GN=OB06G30770 PE=3 SV=1
Length = 845
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/694 (57%), Positives = 518/694 (74%), Gaps = 17/694 (2%)
Query: 161 IKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTR 220
+K ETEAW AA EY+EL +M +KLAP LPY+KSLFLGWFEPLR+AI +QE+ + R
Sbjct: 14 VKAETEAWARAADEYRELEREMLDRKLAPALPYVKSLFLGWFEPLRDAIARDQEVQRRKR 73
Query: 221 LRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYR 280
++ + Y LPAD +AVI MHK+MGLLM++ +G S +VVQ A IGEA+E E ++
Sbjct: 74 VKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGGVSVRVVQAAHCIGEAVEREFKVQT 133
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
F +KT+KK+ + EGE+D A K+ +K +A
Sbjct: 134 FFQKTRKKSAS--KTEGENDEALEKE--------------QAKCRERVKSLVRRRKLTEA 177
Query: 341 LGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNI 400
IV+ + + WG EAQVK+G+ L++LL+D+A++Q PA+Q + PDIRPAFKH L+
Sbjct: 178 QKIVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQKPESSPDIRPAFKHVLRQP 237
Query: 401 STDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYV 460
++ K++ VIECD LV +G E +ARH+ IPY+PMLVPP W GYD G YLFLPSY+
Sbjct: 238 IVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVPPKKWKGYDSGGYLFLPSYI 297
Query: 461 MRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
MR HG K Q++A+K P QL VFEAL+TLGSTKWRVN+RV ++ IW++GGG+A LV
Sbjct: 298 MRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHDAVEAIWSRGGGIAGLV 357
Query: 521 DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFY 580
D+ ++PLPE ++ED EI+KWKW +K +K N E H++RCD ELKL+VARKM++EDGFY
Sbjct: 358 DKGNIPLPERPESEDPDEIQKWKWGLKKAKKTNRELHAERCDTELKLSVARKMREEDGFY 417
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
YPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG++K
Sbjct: 418 YPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEK 477
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
L ++G++AF EN L DIFDSA P++G WW+ AEDPFQCLAAC++L++AL+S +P +
Sbjct: 478 LSHEGKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSSPHCAV 537
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
SH+P+HQDGSCNGLQHYAALGRD +GA AVNL+ G++PAD+YS IATRVL+++R+D+ KD
Sbjct: 538 SHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIATRVLDVVRQDSMKD 597
Query: 761 PKTNPNALHARNLIN-QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLF 819
P TNP A AR++ + QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+ I DD L+
Sbjct: 598 PATNPTASLARHIGSLQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGHITDDKLLY 657
Query: 820 GASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 658 EVSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 691
>C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb10g025820 PE=3 SV=1
Length = 960
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/702 (56%), Positives = 520/702 (74%), Gaps = 20/702 (2%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
++ L++RQ+K ETEAW AA EY+E+ +M ++LAP LPY+KSLF+GWFEPLR+AI +
Sbjct: 124 HRRLRQRQVKAETEAWARAAEEYREIEREMLDRRLAPALPYVKSLFVGWFEPLRDAIARD 183
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
Q++ + R++ + Y LPAD +AVI MHK+MGLLM++ +G GS +VVQ A IGEA+
Sbjct: 184 QDVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAV 243
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
E E ++ F +K++KK +GE+D A K+
Sbjct: 244 EREFKVQSFFQKSRKKKD-----QGENDPALEKE--------------QAKCRKRVKTLV 284
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
+K +A +V+ + + WG EAQVK+GS L++LL+D+A++QPPA+QI D PDIRPA
Sbjct: 285 KRRKMSEAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQIPDSSPDIRPA 344
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
FKH L+ ++ K++ VIECD LV G E +ARH+ IPY+PMLVPP W GY+KG
Sbjct: 345 FKHVLRQPIIENGRLKKKHWVIECDHLVHDGFESTARHVDIPYLPMLVPPKKWKGYNKGG 404
Query: 453 YLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
+LFLPSY+MR HG K Q+DA+ P QL VFEAL+ LGSTKWRVN+RV V++ IW++
Sbjct: 405 HLFLPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSR 464
Query: 513 GGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
GGG+A LVD+ ++PLPE ++ED E++KWKWS+K +K N E H++RCD ELKL+VARK
Sbjct: 465 GGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARK 524
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
M++EDGFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN
Sbjct: 525 MREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLAN 584
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
Y GGV+KL ++G++AF EN L DIFDSA P++G WW AEDPFQCLAAC++L++AL
Sbjct: 585 KYGGGVEKLSHEGKLAFVENQLLDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALN 644
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
SP+P T+SH+P+HQDGSCNGLQHYAALGRD +GA AVNL+ G++PAD+YS IA RVL +
Sbjct: 645 SPSPYRTVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIAARVLNV 704
Query: 753 MRRDAEKDPKTNPNALHARNLIN-QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
+R D+ KDP TNP A + + QVDRKLVKQTVMTSVYGVTYIGAR QI +RL+E+
Sbjct: 705 VREDSMKDPATNPTASLDMGIGSLQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGL 764
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD L+ SCYA + TL AL +MF++AR IM WLGDCAK+
Sbjct: 765 IADDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKM 806
>M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra032120 PE=4 SV=1
Length = 940
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/707 (57%), Positives = 518/707 (73%), Gaps = 47/707 (6%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY+EL ++M ++ LAPNLPY+K +FLGWF+PLR+ I
Sbjct: 138 KFDSLRRRQVKEETEAWERMVDEYRELEKEMCEKSLAPNLPYVKHMFLGWFQPLRDVIER 197
Query: 212 EQEL--CKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ L K ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 198 EQRLQKSKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 256
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIEHE I+ F+++T+K A D+ E D ++K
Sbjct: 257 IAIEHEVGIHNFLKRTRKNN-AGDSQEEVKDKQLLRK--------------------RVN 295
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LL++TAY+QPP Q GD P++
Sbjct: 296 SLIRRKRIIDALKVVKS-EGIKPWGRATQAKLGSRLLELLMETAYVQPPLTQSGDSIPEV 354
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 355 RPAFRHKFKTVT--KYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 412
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+++L V+
Sbjct: 413 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVV 472
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED EI+ WKWSV+ +K N ERHS RCD+ELK
Sbjct: 473 EKLWADGGNIAGLVNREDVPIPEKPLSEDPEEIQTWKWSVRKAKKINRERHSLRCDVELK 532
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGL+WL
Sbjct: 533 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWL 592
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +DGR+AF ENHLDDI DSA + GKRWWL+AEDPFQCLAAC+
Sbjct: 593 KIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAVHGKRWWLKAEDPFQCLAACVI 652
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
LA+AL+SP+P + +S++P+HQ AAAVNL+ GD+PADVYS I+
Sbjct: 653 LAQALKSPSPHSVISNLPIHQ-----------------FEAAAVNLVAGDKPADVYSEIS 695
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 696 LRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 755
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 756 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 802
>Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=P0453H04.42 PE=2 SV=1
Length = 806
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/672 (56%), Positives = 502/672 (74%), Gaps = 20/672 (2%)
Query: 182 MRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVIT 241
M ++LAP LPY+KSLFLGWFEPLR+AI +QE+ + R++ + Y LPAD +AVI
Sbjct: 1 MLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEVQRRKRVKHVYAKYLLLLPADKVAVIV 60
Query: 242 MHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDL 301
MHK+MGLLM++ +GV S +VVQ A IGEA+E E ++ F +KT+KK+ ++ E +
Sbjct: 61 MHKMMGLLMSSKDGVASVRVVQAAHCIGEAVEREFKVQTFFQKTRKKSAGENDLALEKEQ 120
Query: 302 APVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKV 361
A +K +K +A IV+ + + WG E+QVK+
Sbjct: 121 AKCRK--------------------RVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKL 160
Query: 362 GSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQ 421
G+ L++LL+D+A++Q PA+Q + PDIRPAFKH L+ ++ K++ VIECD LV
Sbjct: 161 GTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVH 220
Query: 422 QGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQL 481
+G E +ARH+ IPY+PMLV P W GYD G YLFLPSY+MR HG K Q++A+K P QL
Sbjct: 221 EGFESTARHVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQL 280
Query: 482 NPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRK 541
VFEAL+TLGSTKWRVN+RV + ++ IW++GGG+A LVD++++PLPE +TED EI+K
Sbjct: 281 RKVFEALDTLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQK 340
Query: 542 WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHL 601
WKWS+K +K N E H++RCD ELKL+VARKM++EDGFYYPHNLDFRGRAYPMH +L+HL
Sbjct: 341 WKWSLKKAKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHL 400
Query: 602 GSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSA 661
GSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG++KL ++ ++AF EN L DIFDSA
Sbjct: 401 GSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSA 460
Query: 662 NKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALG 721
P++G WW+ AEDPFQCLAAC++L++AL+S +P+ +SH+P+HQDGSCNGLQHYAALG
Sbjct: 461 TNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALG 520
Query: 722 RDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKL 781
RD +GAAAVNL+ GD+PAD+YS IA RVL+++R D+ +DP TNP A AR L++QVDRKL
Sbjct: 521 RDYMGAAAVNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKL 580
Query: 782 VKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAAR 841
VKQTVMTSVYGVTYIGAR QI +RL+E+ I DD L+ SCYA + TL AL +MF++AR
Sbjct: 581 VKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSAR 640
Query: 842 SIMGWLGDCAKV 853
IM WLGDCAK+
Sbjct: 641 GIMAWLGDCAKM 652
>K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc02g089340.2 PE=3 SV=1
Length = 711
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/580 (66%), Positives = 458/580 (78%), Gaps = 28/580 (4%)
Query: 274 HEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXX 333
H+ RI++F+EKT+K D + + A +++
Sbjct: 6 HQVRIHKFLEKTEKHKAEKDRNMEDGEHATLEQ---------------KKLHKKVTSLMK 50
Query: 334 XQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAF 393
QK + IVR +DD KPWGQ+A+ KVGS L++ L+ TAYIQ PA+Q+ PPDIRPAF
Sbjct: 51 KQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAF 110
Query: 394 KHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAY 453
H+ + ++ ++++ S+RYGVI+CD LV +GLE++ARHMVIPYMPMLVPP WTGYDKG +
Sbjct: 111 IHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGH 170
Query: 454 LFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG 513
L+LPSYVMR HGA+QQR+AVKR QL PVFEAL+TLGSTKWR+NKRVLSV+D+IWA G
Sbjct: 171 LYLPSYVMRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGG 230
Query: 514 GGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKM 573
G LADLVDR DVPLPEE DTEDEA KW+W VK+V+KEN ERHSQRCDIELKLAVA +M
Sbjct: 231 GRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRM 290
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
KDE+GF+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEF GRPLGKSGL +K
Sbjct: 291 KDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLALVK------ 344
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRS 693
D C I+FTE+HLDDIFDSA+KPLEG+ WWL AEDPFQCLA CINL+EA+RS
Sbjct: 345 -----DTPC--KFISFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRS 397
Query: 694 PTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIM 753
+PET +SH+PVHQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGIA RVL+IM
Sbjct: 398 SSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 457
Query: 754 RRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIE 813
RDA++DP P+A+ AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI
Sbjct: 458 NRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 517
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
DD +LFGA+CYAAK TLTAL EMFEAARSIM WLG+CAK+
Sbjct: 518 DDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKI 557
>Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) OS=Arabidopsis
thaliana GN=At2g24120 PE=2 SV=1
Length = 786
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/654 (58%), Positives = 486/654 (74%), Gaps = 30/654 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 158 KFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 217
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 218 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 276
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 277 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 315
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+ AY+QPP Q GD P+
Sbjct: 316 SLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEF 374
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 375 RPAFRHRFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 432
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+ +L V+
Sbjct: 433 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVV 492
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWS + K N ERHS RCD+ELK
Sbjct: 493 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELK 552
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 553 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 612
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +D R+AF ENHLDDI DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 613 KIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVI 672
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 673 LTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 732
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARD 800
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+
Sbjct: 733 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGARE 786
>B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chloroplast, putative
OS=Ricinus communis GN=RCOM_1406230 PE=4 SV=1
Length = 1000
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/712 (54%), Positives = 492/712 (69%), Gaps = 56/712 (7%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
KY +L++RQI+ ETEAWE EY+ L+++M ++KLAPNLPY+K LFLGWFEPL+ I +
Sbjct: 149 KYNLLRRRQIREETEAWERMVEEYKALVKEMCERKLAPNLPYVKGLFLGWFEPLKEGIKS 208
Query: 212 EQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEA 271
EQ L + + + P+ LPAD MAVI MHK++GLLM G +VQ A QIG A
Sbjct: 209 EQNLQRSKKNKAAFAPHIELLPADKMAVIVMHKMVGLLMVGHED-GCVPLVQAAVQIGMA 267
Query: 272 IEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXX 331
IE E RI+ F+EKTK + + L K+
Sbjct: 268 IEQEVRIHNFLEKTKNYQRKKTISGAQESLGKEKE----------------ILRKRVNSL 311
Query: 332 XXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRP 391
+K + +V+ ++ KPWG++ Q K+GS L++LL +TA++QPP NQ D PPD+RP
Sbjct: 312 IRRKKLIEVQKLVKN-EEMKPWGRDTQAKLGSRLIELLTETAFVQPPVNQSADVPPDVRP 370
Query: 392 AFKHTLKNISTD-SQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDK 450
AF+H + + + Q K+YGVIEC+ LV +GL+ SA+HM+IPY PMLVPP W GY+K
Sbjct: 371 AFRHRFRIVKNNPGQKIVKKYGVIECNPLVLKGLDGSAKHMLIPYFPMLVPPKKWKGYNK 430
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
G + FLPSY+MR HG+++Q+DA+K P + VFEAL+TLG+TKWRVN+RVL V++ IW
Sbjct: 431 GGHFFLPSYIMRTHGSRKQQDALKNVPRNHMQKVFEALDTLGNTKWRVNRRVLDVVESIW 490
Query: 511 AKGGGLADLVDRKDVPLPEE---------LDTEDEAEIRKWKWSVKNVRKENNERHSQRC 561
A+GG +A LVDRKD + + T+ +E+R WS + +K N ERH
Sbjct: 491 ARGGNIAGLVDRKDAGCHQSALLPVLMLFMKTDRTSEVR---WSARKAKKTNRERHLN-- 545
Query: 562 DIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKS 621
VARK+KDE+GFYYPHNLDFRGRAYPMHP+L HL SDLCRGILEF EGRPLGKS
Sbjct: 546 ------DVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGILEFAEGRPLGKS 599
Query: 622 GLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCL 681
GL WLKIHLANLY+GGV+KL +DGR+AF E+HL DIFDSA P+ G RWWL AEDPFQCL
Sbjct: 600 GLRWLKIHLANLYSGGVEKLSHDGRLAFVEDHLADIFDSAENPVNGNRWWLTAEDPFQCL 659
Query: 682 AACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADV 741
AACINL+EAL+S +P T +SH+P+HQ AAAVNL+ G++PADV
Sbjct: 660 AACINLSEALKSSSPHTVISHLPIHQP-----------------EAAAVNLVAGEKPADV 702
Query: 742 YSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQ 801
Y+ IA RV E++ RD+ KDP TNPNAL A+ LI+QVDRKLVKQTVMTSVYGVTY+GAR+Q
Sbjct: 703 YTEIAARVHELIERDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQ 762
Query: 802 IKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
IKRRL+E+ I DD LF ASCY AK TLTAL E+F+AAR IMGWLGDCAKV
Sbjct: 763 IKRRLEEKGQITDDRLLFSASCYTAKVTLTALGELFQAARDIMGWLGDCAKV 814
>Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=3 SV=1
Length = 1087
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/709 (53%), Positives = 502/709 (70%), Gaps = 7/709 (0%)
Query: 151 YKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIV 210
+K K L+ RQ K+ETEAW AA EY+EL+ +M K+ LAPNLP +SL LGWFEPLR+AI
Sbjct: 224 WKEKALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIA 283
Query: 211 AEQELCKDTRLR---LTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQ 267
EQ+ ++ R +GP+ +LPADM+AVITMH+LM LLM++ G KVV A Q
Sbjct: 284 QEQKDYEERNFREHRAIYGPFLAKLPADMLAVITMHRLMSLLMSDQEH-GCVKVVHAALQ 342
Query: 268 IGEAIEHEARIYRFMEKTKKKTKATDNC-EGESDLAPVKKGXXXXXXXXXXXXXXXXXXX 326
IGEA+E E IY+ + +K K N G++
Sbjct: 343 IGEAVEQEVGIYKLLRSKRKVAKKVKNKVSGDALDDLDTNTDDSIANSVLDSDLKLKLAK 402
Query: 327 XXXXXXXXQKNQQALG-IVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDG 385
Q+ + +G +V+ + +PWG QVKVGS L++L+++T+ ++ PA+Q
Sbjct: 403 EKVKKLVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQD 462
Query: 386 PPDIRPAFKHTLKNISTDSQNGSKR-YGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNN 444
++RPAFKHTL+N ++N R YGVIECD V L+KS +HMV+PYMPMLV P
Sbjct: 463 MTELRPAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRA 522
Query: 445 WTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLS 504
WTG+ G YL L S +MR HGAK+ RD + + + +AL+ LGST+W++N VL
Sbjct: 523 WTGFYDGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLD 582
Query: 505 VIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
V++Q+W GG LADLVD +DVPLP++ +++D EIR W+ + ++ N+ERHS RCD E
Sbjct: 583 VLEQVWKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTE 642
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
LKLA ARK++DE+GF+YPHNLDFRGRAYP+HP+LNHLGSD+CRGIL+F EGR LG +GL
Sbjct: 643 LKLAAARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLR 702
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAAC 684
WLKIHLANLY G V K+ +D R+A+ + ++ +FDSA++PL+G RWWL+AEDPFQ LA C
Sbjct: 703 WLKIHLANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATC 762
Query: 685 INLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
+++ A++S PET +SH+PVHQDGSCNGLQHYAALGRD++GA +VNL+ GD+PADVYSG
Sbjct: 763 LDIRNAIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSG 822
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
IA RV EIM RDA+KDPKT+ +A +A+ L+ ++DRKLVKQTVMTSVYGVT++GAR QI
Sbjct: 823 IAARVREIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFN 882
Query: 805 RLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RLKER I++ +++ A+CYAAKTTL AL EMF+ AR IM WLGDCAK+
Sbjct: 883 RLKERGTIQEQTEMYRAACYAAKTTLNALGEMFKEARCIMSWLGDCAKI 931
>Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=2 SV=1
Length = 1087
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/709 (53%), Positives = 502/709 (70%), Gaps = 7/709 (0%)
Query: 151 YKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIV 210
+K K L+ RQ K+ETEAW AA EY+EL+ +M K+ LAPNLP +SL LGWFEPLR+AI
Sbjct: 224 WKEKALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIA 283
Query: 211 AEQELCKDTRLR---LTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQ 267
EQ+ ++ R +GP+ +LPADM+AVITMH+LM LLM++ G KVV A Q
Sbjct: 284 QEQKDYEERNFREHRAIYGPFLAKLPADMLAVITMHRLMSLLMSDQEH-GCVKVVHAALQ 342
Query: 268 IGEAIEHEARIYRFMEKTKKKTKATDNC-EGESDLAPVKKGXXXXXXXXXXXXXXXXXXX 326
IGEA+E E IY+ + +K K N G++
Sbjct: 343 IGEAVEQEVGIYKLLRSKRKVAKKVKNKVSGDALDDLDTNTDDSIANSVLDSDLKLKLAK 402
Query: 327 XXXXXXXXQKNQQALG-IVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDG 385
Q+ + +G +V+ + +PWG QVKVGS L++L+++T+ ++ PA+Q
Sbjct: 403 EKVKKLVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQD 462
Query: 386 PPDIRPAFKHTLKNISTDSQNGSKR-YGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNN 444
++RPAFKHTL+N ++N R YGVIECD V L+KS +HMV+PYMPMLV P
Sbjct: 463 MTELRPAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRA 522
Query: 445 WTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLS 504
WTG+ G YL L S +MR HGAK+ RD + + + +AL+ LGST+W++N VL
Sbjct: 523 WTGFYDGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLD 582
Query: 505 VIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
V++Q+W GG LADLVD +DVPLP++ +++D EIR W+ + ++ N+ERHS RCD E
Sbjct: 583 VLEQMWKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTE 642
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
LKLA ARK++DE+GF+YPHNLDFRGRAYP+HP+LNHLGSD+CRGIL+F EGR LG +GL
Sbjct: 643 LKLAAARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLR 702
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAAC 684
WLKIHLANLY G V K+ +D R+A+ + ++ +FDSA++PL+G RWWL+AEDPFQ LA C
Sbjct: 703 WLKIHLANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATC 762
Query: 685 INLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
+++ A++S PET +SH+PVHQDGSCNGLQHYAALGRD++GA +VNL+ GD+PADVYSG
Sbjct: 763 LDIRNAIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSG 822
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
IA RV EIM RDA+KDPKT+ +A +A+ L+ ++DRKLVKQTVMTSVYGVT++GAR QI
Sbjct: 823 IAARVREIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFN 882
Query: 805 RLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RLKER I++ +++ A+CYAAKTTL AL EMF+ AR IM WLGDCAK+
Sbjct: 883 RLKERGTIQEQTEMYRAACYAAKTTLNALGEMFKEARCIMSWLGDCAKI 931
>A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196123 PE=3 SV=1
Length = 1088
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/710 (53%), Positives = 502/710 (70%), Gaps = 8/710 (1%)
Query: 151 YKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIV 210
+K K L+ RQ K+ETEAW AA EY+EL+ +M K+ LAPNLP +SL LGWFEPLR+AI
Sbjct: 224 WKEKALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIA 283
Query: 211 AEQELCKDTRLR---LTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQ 267
EQ+ ++ R +GP+ +LPADM+AVITMH+LM LLM++ G KVV A Q
Sbjct: 284 QEQKDYEERNFREHRAIYGPFLAKLPADMLAVITMHRLMSLLMSDQEH-GCVKVVHAALQ 342
Query: 268 IGEAIEHEARIYRFMEKTKKKTKATDNC-EGESDLAPVKKGXXXXXXXXXXXXXXXXXXX 326
IGEA+E E IY+ + +K K N G++
Sbjct: 343 IGEAVEQEVGIYKLLRSKRKVAKKVKNKVSGDALDDLDTNTDDSIANSVLDSDLKLKLAK 402
Query: 327 XXXXXXXXQKNQQALG-IVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDG 385
Q+ + +G +V+ + +PWG QVKVGS L++L+++T+ ++ PA+Q
Sbjct: 403 EKVKKLVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQD 462
Query: 386 PPDIRPAFKHTLKNISTDSQNGSKR-YGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNN 444
++RPAFKHTL+N ++N R YGVIECD V L+KS +HMV+PYMPMLV P
Sbjct: 463 MTELRPAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRA 522
Query: 445 WTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLS 504
WTG+ G YL L S +MR HGAK+ RD + + + +AL+ LGST+W++N VL
Sbjct: 523 WTGFYDGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLD 582
Query: 505 VIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
V++Q+W GG LADLVD +DVPLP++ +++D EIR W+ + ++ N+ERHS RCD E
Sbjct: 583 VLEQMWKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTE 642
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
LKLA ARK++DE+GF+YPHNLDFRGRAYP+HP+LNHLGSD+CRGIL+F EGR LG +GL
Sbjct: 643 LKLAAARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLR 702
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAAC 684
WLKIHLANLY G V K+ +D R+A+ + ++ +FDSA++PL+G RWWL+AEDPFQ LA C
Sbjct: 703 WLKIHLANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATC 762
Query: 685 INLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
+++ A++S PET +SH+PVHQDGSCNGLQHYAALGRD++GA +VNL+ GD+PADVYSG
Sbjct: 763 LDIRNAIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSG 822
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
IA RV EIM RDA+KDPKT+ +A +A+ L+ ++DRKLVKQTVMTSVYGVT++GAR QI
Sbjct: 823 IAARVREIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFN 882
Query: 805 RLKERCAIEDDAQLFGASCYAAK-TTLTALQEMFEAARSIMGWLGDCAKV 853
RLKER I++ +++ A+CYAAK TTL AL EMF+ AR IM WLGDCAK+
Sbjct: 883 RLKERGTIQEQTEMYRAACYAAKVTTLNALGEMFKEARCIMSWLGDCAKI 932
>Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=2 SV=1
Length = 1065
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/706 (54%), Positives = 485/706 (68%), Gaps = 9/706 (1%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K + L KRQ+K+ETEAW+ AA EY+EL+ +M ++ LAPNLP+ +SL L WFEPLR+ I+
Sbjct: 209 KARELHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWFEPLRDGILE 268
Query: 212 EQELC---KDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQI 268
EQ + R +GPY +LPADM+AVITMH+LMGLLM + G KV+ A I
Sbjct: 269 EQRAYGNREHREHRSMYGPYMCQLPADMLAVITMHRLMGLLMCDQEH-GCVKVIHAAVVI 327
Query: 269 GEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXX 328
GEA+E E RI++ M KK A N D+A
Sbjct: 328 GEAVEQEVRIFQLMNSQKKSKDAEGNTNSLGDVA---NNEELEATRKADLKSKKVVRDKV 384
Query: 329 XXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPD 388
K ++ I++ +PW VK+GS L++L+++T++++ PA Q GD +
Sbjct: 385 KKLVKQNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGE 444
Query: 389 IRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGY 448
+RPAF+H KN QN ++ YGVIECD LV +++S +HMV+PYMPMLV P W G+
Sbjct: 445 LRPAFQHKFKN-HVLRQNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGF 503
Query: 449 DKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQ 508
++G YL+L S +MR GAK+QR AV P + V EALN LG T WRVNKRVL V+++
Sbjct: 504 NEGGYLYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEK 563
Query: 509 IWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLA 568
+W GGG+ADLV+ DVP+PE DT D+ KWK +V ++ N+ERHS RCD ELKL
Sbjct: 564 LWKAGGGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLG 623
Query: 569 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKI 628
VA+K+ DE+ FYYPHNLDFRGRAYPMHP+LNHLG+DLCRG+L F +G+PLG SGL W+KI
Sbjct: 624 VAKKLIDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKI 683
Query: 629 HLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLA 688
LANLY G V K+ +D R AF E+ +++I DSA +PL+G R WL+AEDPFQ LAACI+L
Sbjct: 684 QLANLYGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLR 743
Query: 689 EALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
+AL S PET +SH+PVHQDGSCNGLQHYAALGRD++GA +VNLI GD+PADVYSGIA R
Sbjct: 744 DALASGNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAER 803
Query: 749 VLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
V IM +DA K+P T+ NA AR L Q+DRKLVKQTVMTSVYGVT+IGAR QI RLKE
Sbjct: 804 VKIIMEKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKE 863
Query: 809 RCAIE-DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
R I D + A+CYAAK TL AL EMF+ AR IM WLGDCAK+
Sbjct: 864 RSPIAVDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKI 909
>A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223008 PE=3 SV=1
Length = 1065
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/706 (54%), Positives = 484/706 (68%), Gaps = 9/706 (1%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K + L KRQ+K+ETEAW+ AA EY+EL+ +M ++ LAPNLP+ +SL L WFEPLR+ I+
Sbjct: 209 KARELHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWFEPLRDGILE 268
Query: 212 EQELC---KDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQI 268
EQ + R +GPY +LPADM+AVITMH+LMGLLM + G KV+ A I
Sbjct: 269 EQRAYGNREHREHRSMYGPYMCQLPADMLAVITMHRLMGLLMCDQEH-GCVKVIHAAVVI 327
Query: 269 GEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXX 328
GEA+E E RI++ M KK A N D+A
Sbjct: 328 GEAVEQEVRIFQLMNSQKKSKDAEGNTNSLGDVA---NNEELEATRKADLKSKKVVRDKV 384
Query: 329 XXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPD 388
K ++ I++ +PW VK+GS L++L+++T++++ PA Q GD +
Sbjct: 385 KKLVKQNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGE 444
Query: 389 IRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGY 448
+RPAF+H KN QN ++ YGVIECD LV +++S +HMV+PYMPMLV P W G+
Sbjct: 445 LRPAFQHKFKN-HVLRQNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGF 503
Query: 449 DKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQ 508
++G YL+L S +MR GAK+QR AV P + V EALN LG T WRVNKRVL V+++
Sbjct: 504 NEGGYLYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEK 563
Query: 509 IWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLA 568
+W GGG+ADLV+ DVP+PE DT D+ KWK +V ++ N+ERHS RCD ELKL
Sbjct: 564 LWKAGGGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLG 623
Query: 569 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKI 628
VA K+ DE+ FYYPHNLDFRGRAYPMHP+LNHLG+DLCRG+L F +G+PLG SGL W+KI
Sbjct: 624 VANKLIDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKI 683
Query: 629 HLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLA 688
LANLY G V K+ +D R AF E+ +++I DSA +PL+G R WL+AEDPFQ LAACI+L
Sbjct: 684 QLANLYGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLR 743
Query: 689 EALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
+AL S PET +SH+PVHQDGSCNGLQHYAALGRD++GA +VNLI GD+PADVYSGIA R
Sbjct: 744 DALASGNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAER 803
Query: 749 VLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
V IM +DA K+P T+ NA AR L Q+DRKLVKQTVMTSVYGVT+IGAR QI RLKE
Sbjct: 804 VKIIMEKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKE 863
Query: 809 RCAIE-DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
R I D + A+CYAAK TL AL EMF+ AR IM WLGDCAK+
Sbjct: 864 RSPIAVDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKI 909
>Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=3 SV=1
Length = 1065
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/706 (54%), Positives = 484/706 (68%), Gaps = 9/706 (1%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K + L KRQ+K+ETEAW+ AA EY+EL+ +M ++ LAPNLP+ +SL L WFEPLR+ I+
Sbjct: 209 KARELHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWFEPLRDGILE 268
Query: 212 EQELC---KDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQI 268
EQ + R +GPY +LPADM+AVITMH+LMGLLM + G KV+ A I
Sbjct: 269 EQRAYGNREHREHRSMYGPYMCQLPADMLAVITMHRLMGLLMCDQEH-GCVKVIHAAVVI 327
Query: 269 GEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXX 328
GEA+E E RI++ M KK A N D+A
Sbjct: 328 GEAVEQEVRIFQLMNSQKKSKDAEGNTNSLGDVA---NNEELEATRKADLKSKKVVRDKV 384
Query: 329 XXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPD 388
K ++ I++ +PW VK+GS L++L+++T++++ PA Q GD +
Sbjct: 385 KKLVKQNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGE 444
Query: 389 IRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGY 448
+RPAF+H KN QN ++ YGVIECD LV +++S +HMV+PYMPMLV P W G+
Sbjct: 445 LRPAFQHKFKN-HVLRQNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGF 503
Query: 449 DKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQ 508
++G YL+L S +MR GAK+QR AV P + V EALN LG T WRVNKRVL V+++
Sbjct: 504 NEGGYLYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEK 563
Query: 509 IWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLA 568
+W GGG+ADLV+ DVP+PE DT D+ KWK +V ++ N+ERHS RCD ELKL
Sbjct: 564 LWKAGGGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLG 623
Query: 569 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKI 628
VA K+ DE+ FYYPHNLDFRGRAYPMHP+LNHLG+DLCRG+L F +G+PLG SGL W+KI
Sbjct: 624 VADKLIDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKI 683
Query: 629 HLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLA 688
LANLY G V K+ +D R AF E+ +++I DSA +PL+G R WL+AEDPFQ LAACI+L
Sbjct: 684 QLANLYGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLR 743
Query: 689 EALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
+AL S PET +SH+PVHQDGSCNGLQHYAALGRD++GA +VNLI GD+PADVYSGIA R
Sbjct: 744 DALASGNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAER 803
Query: 749 VLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
V IM +DA K+P T+ NA AR L Q+DRKLVKQTVMTSVYGVT+IGAR QI RLKE
Sbjct: 804 VEIIMEKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKE 863
Query: 809 RCAIE-DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
R I D + A+CYAAK TL AL EMF+ AR IM WLGDCAK+
Sbjct: 864 RSPIAVDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKI 909
>A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_30516 PE=3 SV=1
Length = 845
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/500 (71%), Positives = 412/500 (82%), Gaps = 42/500 (8%)
Query: 354 GQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGV 413
G+ + +VGS L++L+I+TAYIQPPA+Q DGPPDIRPAF H ++ ++ + Q
Sbjct: 234 GEAIEHEVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQ-------- 285
Query: 414 IECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAV 473
YDKGA+LFLPSYVMR HGA+QQRDAV
Sbjct: 286 ----------------------------------YDKGAHLFLPSYVMRTHGARQQRDAV 311
Query: 474 KRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDT 533
+RAP Q+ VFEALNTLGSTKWRVNKRVLS++D+IW+ GG LADLVDR DV LPE+ DT
Sbjct: 312 RRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDT 371
Query: 534 EDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYP 593
EDE +++KW+W+++ +KEN+ERHSQRCD+ELKLAVARKMKDEDGFYYPHNLDFRGRAYP
Sbjct: 372 EDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYP 431
Query: 594 MHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENH 653
MHPYLNHLGSDLCRG+LEF EGRPLGKSGL WLKIHLANLYAGGVDKL YDGRIAFTENH
Sbjct: 432 MHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENH 491
Query: 654 LDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNG 713
L+DIFDSA++PLEGKRWWL AEDPFQCLA CINL EALRSP+PET +SH+PVHQDGSCNG
Sbjct: 492 LEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNG 551
Query: 714 LQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNL 773
LQHYAALGRDKLGA AVNL+ G++PADVY+GIATRV+EIM+ DA KDP T+P+A AR L
Sbjct: 552 LQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLL 611
Query: 774 INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTAL 833
++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER I DD++LF ASCYAAK TLTAL
Sbjct: 612 LDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTAL 671
Query: 834 QEMFEAARSIMGWLGDCAKV 853
EMF+AARSIM WLGDCAKV
Sbjct: 672 GEMFQAARSIMNWLGDCAKV 691
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 120/160 (75%), Gaps = 4/160 (2%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ +KY ML++RQI++ETEAWE AA EY+ELL DM +QKLAPNLPY+KSLFLGWFEPLR
Sbjct: 113 GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 172
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL + R +H YFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 173 DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 231
Query: 267 QIGEAIEHE--ARIYRFM-EKTKKKTKATDNCEGESDLAP 303
QIGEAIEHE +R+ M E + A+ + +G D+ P
Sbjct: 232 QIGEAIEHEVGSRLIELMIETAYIQPPASQSADGPPDIRP 271
>M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloroplastic
OS=Triticum urartu GN=TRIUR3_09671 PE=4 SV=1
Length = 921
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/663 (52%), Positives = 461/663 (69%), Gaps = 54/663 (8%)
Query: 204 PLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQ 263
PLR+A+ +Q++ + R++ + Y LPA+ +AVI MHK+MGLLM++ +G GS +VVQ
Sbjct: 145 PLRDAVARDQDVQRRKRVKHVYAKYLLLLPAEKVAVIVMHKMMGLLMSSKDGCGSVRVVQ 204
Query: 264 GASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
A IGEA+E E ++ F +KT++KT++ + E + L
Sbjct: 205 AAHSIGEAVEREYKVQAFFQKTRRKTRSKTDSENDPAL----------------NKEQAK 248
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
+K +A +V+ + + WG EAQVKV C
Sbjct: 249 CRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKV--CF------------------ 288
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPN 443
PD P T + + K++ VIECD LV +G E +ARH+ IPY+PMLVPP
Sbjct: 289 ---PDSIPTI--TEFCLICYGRRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPT 343
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
W GYDKG +LFLPSYVMR HG K Q++A+K P QL VFEAL+ LG TKWRVN+RV
Sbjct: 344 KWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVH 403
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
V++ IW++GGG+A LVD+ ++PLPE+ +TED EI+KWKWSVK +K N E H++RCD
Sbjct: 404 DVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKANRELHAERCDT 463
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKL+VARKM++EDGFYYPHNLDFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL
Sbjct: 464 ELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGL 523
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIHLAN Y GG++KL ++ ++AF E+HL DIFDSA+ P++G WW+ AEDPFQCLAA
Sbjct: 524 RWLKIHLANKYGGGIEKLSHESKLAFVEDHLPDIFDSASNPVDGNCWWINAEDPFQCLAA 583
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
C++L++AL SP+P +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNL+ G++PAD+YS
Sbjct: 584 CMDLSKALESPSPHDAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYS 643
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
IA RVL+++R D+ KDP T+P+ A+ L+++VDRKLVKQTVMTSVYGVT+IGAR QIK
Sbjct: 644 EIAARVLDVVREDSMKDPATDPSVSLAKVLVDEVDRKLVKQTVMTSVYGVTFIGARQQIK 703
Query: 804 RRLKERCAIEDDAQLFGASCYAA-------------KTTLTALQEMFEAARSIMGWLGDC 850
+RL+E+ I DD L+ SCYA K TL AL +MF++AR+IM WLG+C
Sbjct: 704 KRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLMKVTLDALGQMFQSARAIMAWLGEC 763
Query: 851 AKV 853
AK+
Sbjct: 764 AKM 766
>N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloroplastic
OS=Aegilops tauschii GN=F775_25754 PE=4 SV=1
Length = 887
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/747 (48%), Positives = 473/747 (63%), Gaps = 116/747 (15%)
Query: 182 MRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVIT 241
M + LAP LPY+KSLFLGWFEPLR+A+ +Q++ + R++ + Y LPA+ +AVI
Sbjct: 1 MLDRHLAPQLPYVKSLFLGWFEPLRDAVARDQDVQRRKRVKHVYAKYLLLLPAEKVAVIV 60
Query: 242 MHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDL 301
MHK+MGLLM++ +G GS +VVQ A IGEA+E E ++ F +KT++KT++ E + L
Sbjct: 61 MHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVEREYKVQAFFQKTRRKTRSKTESENDPGL 120
Query: 302 APVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKV 361
+K +A +V+ + + WG EAQVKV
Sbjct: 121 ----------------DKEQAKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKV 164
Query: 362 GSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQ 421
C PD P T + + K++ VIECD LV
Sbjct: 165 --CF---------------------PDSTPTM--TEFCLICYGRRLKKKHFVIECDPLVH 199
Query: 422 QGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQL 481
+G E +ARH+ IPY+PMLVPP W GYDKG +LFLPSYVMR HG K Q++A+K P QL
Sbjct: 200 EGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQL 259
Query: 482 NPVFE---------ALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELD 532
VFE AL+ LG TKWRVN+RV V++ IW++GGG+A LVD+ ++PLPE+ +
Sbjct: 260 RKVFEQSEALSYWQALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGNIPLPEQPE 319
Query: 533 TEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAY 592
TED EI+KWKWSVK +K N E H++RCD ELKL+VARKM++EDGFYYPHNLDFRGRAY
Sbjct: 320 TEDPDEIQKWKWSVKKTKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAY 379
Query: 593 PMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTEN 652
PMHP+L+HLGSDLCRG+LE+ EGRPLGKSGL WLKIHLAN Y GG++KL ++ ++ F E+
Sbjct: 380 PMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHESKLTFVED 439
Query: 653 HLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCN 712
HL DIFDSA P++G WW+ AEDPFQCLAAC++L+ AL S +P +SH+P+HQDGSCN
Sbjct: 440 HLPDIFDSAANPVDGNCWWINAEDPFQCLAACMDLSNALESSSPHGAVSHLPIHQDGSCN 499
Query: 713 GLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT------------------RVLEIMR 754
GLQHYAALGRD +GAAAVNL+ G++PAD+YS IA RVL+++R
Sbjct: 500 GLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARCLPRRPPFPLPSLIYPGRVLDVVR 559
Query: 755 RDAEKDPKTNPNALHARNLIN-----------------------------------QVDR 779
D+ KDP T+P+ A+ L++ QVDR
Sbjct: 560 EDSMKDPATDPSVPLAKVLVDEVSLLPAPLCLNQEIFFFMYLFFNKTVEDLDIGSLQVDR 619
Query: 780 KLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAA------------- 826
KLVKQTVMTSVYGVT+IGAR QI +RL+E+ I DD L+ SCYA
Sbjct: 620 KLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLM 679
Query: 827 KTTLTALQEMFEAARSIMGWLGDCAKV 853
K TL AL +MF++AR+IM WLGDCAK+
Sbjct: 680 KVTLDALGQMFQSARAIMAWLGDCAKM 706
>B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0196710 PE=3 SV=1
Length = 589
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/406 (81%), Positives = 366/406 (90%)
Query: 448 YDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVID 507
YDKGA+LFLPSYVMR HGA+QQR+AVK P QL PVFEAL+TLGSTKWR+NKR+L V+D
Sbjct: 30 YDKGAHLFLPSYVMRTHGARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVVD 89
Query: 508 QIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
+IW GG L DLVDR DVPLPE+ +TEDEA +RKWKW ++ +KEN ERHSQRCD ELKL
Sbjct: 90 RIWNSGGRLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKL 149
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
AVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGKSGL WLK
Sbjct: 150 AVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 209
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHLANL+AGGVDKL YDGRIAFTENHLDDIFDSA++PLEGKRWWL AEDPFQCLA CI+L
Sbjct: 210 IHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDL 269
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
EALRS +PET +SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGIA
Sbjct: 270 TEALRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAV 329
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
RVL+IMR+DA+KDPK P+ALHA+ LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK
Sbjct: 330 RVLDIMRKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 389
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
ER I DD ++F ASCYAAK TLTAL EMFEAARSIM WLG+CAK+
Sbjct: 390 ERGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKI 435
>N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcomitrella patens
GN=rpoTm PE=2 SV=1
Length = 1010
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/709 (49%), Positives = 465/709 (65%), Gaps = 19/709 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K + L++RQI ETEAW +A +Y+E + +M ++KLAPNLP + L LGW+EPLR+AI
Sbjct: 158 KLQELRQRQIINETEAWTNAEAQYEEFIAEMCRKKLAPNLPASQLLLLGWYEPLRDAIAE 217
Query: 212 EQELCKDTRLR---LTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQI 268
EQ + R ++GP+ +LP +AVITMH L+ L+M+N +G KV+Q A I
Sbjct: 218 EQRAFSELEFRGERASYGPFLCQLPPSQLAVITMHCLLALVMSNEK-MGYVKVIQAALHI 276
Query: 269 GEAIEHEARIYRF-MEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXX 327
GEA+E E I + + K KK + ++ ++ G
Sbjct: 277 GEAVEQEVLIRKLRIGKAKKNETKRKGITKDDGISTIESGKVELTTSPELPTQATGMQKL 336
Query: 328 XXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP- 386
Q+A G PWG KVGS L++L ++TA I+ P+ D P
Sbjct: 337 RKLRLWRSMLQKASGS-------DPWGPTIYAKVGSRLLELFMETAVIRVPS----DDPH 385
Query: 387 --PDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNN 444
P F+HT K S S +GV+EC+ LV + ++KS +++++PYMPM+ P +
Sbjct: 386 VDASFEPVFQHTNKKFVCTSGRSSTGFGVVECNPLVLEQIDKSVKYVIMPYMPMVSKPKH 445
Query: 445 WTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLS 504
W G+ G YLFL S +MR HG+K+Q D K P + +F+ALN LG T WRVNK VL+
Sbjct: 446 WKGFHDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGETGWRVNKPVLA 505
Query: 505 VIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
V++QIW +GG LA+LVD +DV +P + +T + E++ W+ V V++ N ER+S RCD+E
Sbjct: 506 VLEQIWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNYERYSLRCDVE 565
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
LKLAVARK+ +ED FY PHNLDFRGRAYPMHP LNHLGSD+CRG+LEF +GRPLG++GL
Sbjct: 566 LKLAVARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAKGRPLGETGLR 625
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAAC 684
WLKIHLANLY G + KL +D R+A + H+DD+FDSA P+ G RWWL+AEDPFQ LAAC
Sbjct: 626 WLKIHLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKAEDPFQFLAAC 685
Query: 685 INLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
I++ A++S P+T S +PVHQDGSCNGLQHYAALGRD++GA VNL+ GD PADVYS
Sbjct: 686 IDIRNAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLAGDVPADVYSA 745
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
IA RV + + A K+P+ + +A AR L+ Q+DRKLVKQT+MTSVYGVT++GAR QI
Sbjct: 746 IADRVHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVTFVGARIQILN 805
Query: 805 RLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RLKER I+D +LF AS YAAK TL AL E F AR IM WL +CA++
Sbjct: 806 RLKERGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQI 854
>A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_222742 PE=3 SV=1
Length = 861
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/709 (48%), Positives = 465/709 (65%), Gaps = 19/709 (2%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K + L++RQI ETEAW +A +Y+E + +M ++KLAPNLP + L LGW+EPLR+AI
Sbjct: 9 KLQELRQRQIINETEAWTNAEAQYEEFIAEMCRKKLAPNLPASQLLLLGWYEPLRDAIAE 68
Query: 212 EQELCKDTRLR---LTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQI 268
EQ + R ++GP+ +LP +AVITMH L+ L+M+N +G KV+Q A I
Sbjct: 69 EQRAFSELEFRGERASYGPFLCQLPPSQLAVITMHCLLALVMSNEK-MGYVKVIQAALHI 127
Query: 269 GEAIEHEARIYRF-MEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXX 327
GEA+E E I + + K KK + ++ ++ G
Sbjct: 128 GEAVEQEVLIRKLRIGKAKKNETKRKGITKDDGISTIESGKVELTTSPELPTQATGMQKL 187
Query: 328 XXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP- 386
Q+A G PWG KVGS L++L ++TA I+ P+ D P
Sbjct: 188 RKLRLWRSMLQKASGS-------DPWGPTIYAKVGSRLLELFMETAVIRVPS----DDPH 236
Query: 387 --PDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNN 444
P F+HT K + S +GV+EC+ LV + ++KS +++++PYMPM+ P +
Sbjct: 237 VDASFEPVFQHTNKKFVCTNGRSSTGFGVVECNPLVLEQIDKSVKYVIMPYMPMVSKPKH 296
Query: 445 WTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLS 504
W G+ G YLFL S +MR HG+K+Q D K P + +F+ALN LG T WRVNK VL+
Sbjct: 297 WKGFHDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGETGWRVNKPVLA 356
Query: 505 VIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
V++QIW +GG LA+LVD +DV +P + +T + E++ W+ V V++ N ER+S RCD+E
Sbjct: 357 VLEQIWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNYERYSLRCDVE 416
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
LKLAVARK+ +ED FY PHNLDFRGRAYPMHP LNHLGSD+CRG+LEF +GRPLG++GL
Sbjct: 417 LKLAVARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAKGRPLGETGLR 476
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAAC 684
WLKIHLANLY G + KL +D R+A + H+DD+FDSA P+ G RWWL+AEDPFQ LAAC
Sbjct: 477 WLKIHLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKAEDPFQFLAAC 536
Query: 685 INLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
I++ A++S P+T S +PVHQDGSCNGLQHYAALGRD++GA VNL+ GD PADVYS
Sbjct: 537 IDIRNAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLAGDVPADVYSA 596
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
IA RV + + A K+P+ + +A AR L+ Q+DRKLVKQT+MTSVYGVT++GAR QI
Sbjct: 597 IADRVHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVTFVGARIQILN 656
Query: 805 RLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RLKER I+D +LF AS YAAK TL AL E F AR IM WL +CA++
Sbjct: 657 RLKERGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQI 705
>B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor) OS=Selaginella
moellendorffii GN=rpoT PE=3 SV=1
Length = 1002
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/700 (50%), Positives = 465/700 (66%), Gaps = 32/700 (4%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKD 218
RQ K+E +AW+ A REY+++L +M ++KLAPNLP+ KSL + WFEP+R+ I E + +
Sbjct: 175 RQQKLELDAWDAAVREYRKILVEMCRKKLAPNLPFAKSLMVSWFEPVRDEIAKELKAIEK 234
Query: 219 TRL---RLTHGPYFNE--LPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIE 273
R +GP L AD++AVITMH+L+ L+M + + G ++ A IG+A+E
Sbjct: 235 EEPGEDRSHYGPLLKGAGLTADVLAVITMHRLVALMMQDVDS-GCIRLANTAVLIGDAVE 293
Query: 274 HEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXX 333
E +I R ++K K K
Sbjct: 294 QEIKIRRALKKRKPKE------------------LAEEAEPPTPEEEKKEYLKDKLRRAI 335
Query: 334 XQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAF 393
++ + I++ D +PW Q K+G L+ +++ ++I P + + +IRPAF
Sbjct: 336 IERPRNVKEILKSLDPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSDCPEDGTEIRPAF 395
Query: 394 KHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAY 453
+H LK + YG I CD ++ ++ SA+ +V+PYMPML+PP W GY GAY
Sbjct: 396 RHVLK---VPKGGLLRSYGAIVCDPHLRGRIDDSAKFIVMPYMPMLIPPRAWKGYHNGAY 452
Query: 454 LFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG 513
L L S +MR HG+KQQR+AV+ P QL VF AL+TLG+ W++NK V VI+++W+ G
Sbjct: 453 LHLRSVIMRTHGSKQQREAVRNTPRAQLQQVFRALDTLGAASWKINKEVFEVIEKLWSAG 512
Query: 514 GGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKM 573
GG+ LVDRKDVPLP + +TEDEAE+R W+ ++ N+ER+SQRCD+ELKLAVAR +
Sbjct: 513 GGIGGLVDRKDVPLPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQRCDLELKLAVARSL 572
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
KDE+ FYYPHNLDFRGRAYPMH +LNHLGSD+CRG+L F +GRPLG +GL WLKIH+AN+
Sbjct: 573 KDEECFYYPHNLDFRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLGPTGLRWLKIHIANV 632
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRS 693
+A G DKL +DGR+AF E++L+ + SAN+PL+ RWWL+AEDPFQCLAACI+L A+ S
Sbjct: 633 FANGADKLPFDGRVAFAESNLEHVVASANQPLKN-RWWLKAEDPFQCLAACIDLRNAMHS 691
Query: 694 PTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIM 753
P PE +SH+PVHQDGSCNGLQHYAALGRDK GA AVNLIG D PADVYSGIA RV ++
Sbjct: 692 PNPEYYISHLPVHQDGSCNGLQHYAALGRDKTGARAVNLIGADYPADVYSGIAARVRTLV 751
Query: 754 RRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIE 813
DA KDP A++A+ L+ VDRKLVKQTVMTSVYGVTY+GAR+QI RL+++ I
Sbjct: 752 EEDARKDPA----AVYAKLLVGHVDRKLVKQTVMTSVYGVTYVGARNQITNRLRDKGFIL 807
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
D+ L+ CYAAK TL AL EMF AR IM WLG CAKV
Sbjct: 808 DEPTLYRTGCYAAKVTLNALGEMFGEARLIMNWLGQCAKV 847
>D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_108034 PE=3 SV=1
Length = 831
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/703 (50%), Positives = 469/703 (66%), Gaps = 32/703 (4%)
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQEL 215
L RQ K+E +AW+ A REY+++L +M ++KLAPNLP+ KSL + WFEP+R+ I E +
Sbjct: 1 LFNRQQKLELDAWDAAVREYRKILVEMCRKKLAPNLPFAKSLMVSWFEPVRDEIAKELKA 60
Query: 216 CKDTRL---RLTHGPYFNE--LPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGE 270
+ R +GP L AD++AVITMH+L+ L+M + + G ++ A IG+
Sbjct: 61 IEKEEPGEDRSHYGPLLKGAGLTADVLAVITMHRLVALMMQDVDS-GCIRLANTAVLIGD 119
Query: 271 AIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
A+E E +I R ++K K K A + +
Sbjct: 120 AVEQEIKIRRALKKRKPKELAEEAEPPTPEEE------------------KKEYLKDKLR 161
Query: 331 XXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR 390
++ + I++ D +PW Q K+G L+ +++ ++I P + + +IR
Sbjct: 162 RAIIERPRNVKEILKSLDPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSDCPEDGTEIR 221
Query: 391 PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDK 450
PAF+H LK + YG I CD ++ ++ SA+ +V+PYMPML+PP W GY
Sbjct: 222 PAFRHVLK---VPKGGLLRSYGAIVCDPHLRGRIDDSAKFIVMPYMPMLIPPRAWKGYHN 278
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
GAYL L S +MR HG+KQQR+AV+ P QL VF AL+TLG+ W++NK V VI+++W
Sbjct: 279 GAYLHLRSVIMRTHGSKQQREAVRNTPRAQLQQVFRALDTLGAASWKINKEVFEVIEKLW 338
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
+ GGG+ LVDRKDVPLP + +TEDEAE+R W+ ++ N+ER+SQRCD+ELKLAVA
Sbjct: 339 SAGGGIGGLVDRKDVPLPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQRCDLELKLAVA 398
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
R +KDE+ FYYPHNLDFRGRAYPMH +LNHLGSD+CRG+L F +GRPLG +GL WLKIH+
Sbjct: 399 RSLKDEECFYYPHNLDFRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLGPTGLRWLKIHI 458
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
AN++A G DKL +DGR+AF E++L+ + SAN+PL+ RWWL+AEDPFQCLAACI+L A
Sbjct: 459 ANVFANGADKLPFDGRVAFAESNLEHVVASANQPLKN-RWWLKAEDPFQCLAACIDLRNA 517
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
+ SP PE +SH+PVHQDGSCNGLQHYAALGRDK GA AVNLIG D PADVYSGIA RV
Sbjct: 518 MHSPNPEYYISHLPVHQDGSCNGLQHYAALGRDKTGARAVNLIGADYPADVYSGIAARVR 577
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
++ DA KDP A++A+ L+ VDRKLVKQTVMTSVYGVTY+GAR+QI RL+++
Sbjct: 578 TLVEEDARKDPA----AVYAKLLVGHVDRKLVKQTVMTSVYGVTYVGARNQITNRLRDKG 633
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I D+ L+ CYAAK TL AL EMF AR IM WLG CAKV
Sbjct: 634 FILDEPTLYRTGCYAAKVTLNALGEMFGEARLIMNWLGQCAKV 676
>G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_7g017440 PE=3 SV=1
Length = 895
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/406 (78%), Positives = 359/406 (88%)
Query: 448 YDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVID 507
+DKG YLFLPSYVMR HG KQQR+AVK+ P QL PVFEAL+TLG+TKWRVN +VLSV+D
Sbjct: 334 FDKGGYLFLPSYVMRTHGVKQQREAVKKVPRKQLEPVFEALDTLGNTKWRVNNKVLSVVD 393
Query: 508 QIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
+IWA GG LA LVDR DV +PEEL+++DEAE +KWKW VK+V+KEN ER+S RCD ELKL
Sbjct: 394 RIWAGGGRLAGLVDRNDVEIPEELESDDEAEKKKWKWKVKSVKKENRERYSLRCDTELKL 453
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
AVARKMKDE+ FYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF +GRPLGKSGLHWLK
Sbjct: 454 AVARKMKDEECFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLK 513
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHLANLY GGVDKL +GRI F ENHLD+IFDSA +P+EG+RWWL AEDPFQ LAAC+ L
Sbjct: 514 IHLANLYGGGVDKLSNEGRITFVENHLDEIFDSAEQPMEGRRWWLNAEDPFQFLAACMTL 573
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
EAL+ TPE+ +SH+PVHQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGIA
Sbjct: 574 TEALKISTPESFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 633
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
RVL IM+ DA+KDP+T A HA+ L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLK
Sbjct: 634 RVLAIMKIDAQKDPETFSEARHAKILVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 693
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
ER AI DD++LFGA+CYAAK TLTALQEMFE ARSIM WLGDCAKV
Sbjct: 694 ERDAIADDSELFGAACYAAKVTLTALQEMFEGARSIMNWLGDCAKV 739
>B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_580715 PE=3 SV=1
Length = 543
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/370 (80%), Positives = 335/370 (90%), Gaps = 1/370 (0%)
Query: 484 VFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWK 543
+F+AL+TLG+T+WRVNKRVLSV+D+IW+ GG LADLVD DVPLPE+ +TEDEA ++KWK
Sbjct: 21 IFQALDTLGNTRWRVNKRVLSVVDRIWSNGGCLADLVDHSDVPLPEKPETEDEALLKKWK 80
Query: 544 WSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGS 603
W ++ V+KEN ERH+QRCDIELKLAVARKMKDE+GFYYPHN+DFRGRAYPMHPYLNHLGS
Sbjct: 81 WKLRGVKKENKERHAQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGS 140
Query: 604 DLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANK 663
DLCRGILEF EGRPLGKSGL WLKIH+ANL+AGGVDKL Y+GRIAFTENHLDDIFD +K
Sbjct: 141 DLCRGILEFAEGRPLGKSGLRWLKIHIANLFAGGVDKLSYEGRIAFTENHLDDIFDCTDK 200
Query: 664 PLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRD 723
PL+GKRWWL AEDPFQ LA CINL EALRS +PET +SH+PVHQDGSCNGLQHYAALGRD
Sbjct: 201 PLDGKRWWLHAEDPFQFLAVCINLTEALRSSSPETYISHIPVHQDGSCNGLQHYAALGRD 260
Query: 724 KLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVK 783
KLGAAAVNL+ G++PADVYSGIA RVL+IMRRDA+KDP P+AL A+ LINQVDRKLVK
Sbjct: 261 KLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPDVFPDALRAKELINQVDRKLVK 320
Query: 784 QTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSI 843
QTVMTSVYGVTYIGARDQIKRRLKER I +++ +FG SCYAAK TLTAL EMFEAARSI
Sbjct: 321 QTVMTSVYGVTYIGARDQIKRRLKER-GITEESDIFGCSCYAAKVTLTALGEMFEAARSI 379
Query: 844 MGWLGDCAKV 853
M WLGDCAK+
Sbjct: 380 MNWLGDCAKI 389
>M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Triticum urartu
GN=TRIUR3_29385 PE=4 SV=1
Length = 854
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 301/403 (74%), Positives = 351/403 (87%), Gaps = 6/403 (1%)
Query: 457 PSYVMRIHGAKQQRDAVKRAPVTQLNPVFE------ALNTLGSTKWRVNKRVLSVIDQIW 510
P++ + +++ +R V + +P+ AL+ LGSTKWRVNK+VLS++D+IW
Sbjct: 266 PAFTHEMRTVAREQQKSRRYGVIKCDPLVRQGLDRTALDNLGSTKWRVNKKVLSIVDRIW 325
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
+ GG LADLVDR DV LPE+ DTEDEAE++KW+WS+++ +KEN+ERHSQRCD+ELKLAVA
Sbjct: 326 SSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVA 385
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
RKMK+E GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG+SGL WLKIHL
Sbjct: 386 RKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHL 445
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
ANLY GGVDKL YDGRIAFTENHLDDIFDSAN+PLEGKRWWLEAEDPFQCLA C++L EA
Sbjct: 446 ANLYGGGVDKLSYDGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEA 505
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
LRSP+PET +SH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVYSGIA RV+
Sbjct: 506 LRSPSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVV 565
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
EIM+RDA+KDP + +A AR L++QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER
Sbjct: 566 EIMKRDAQKDPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERG 625
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I DD++LFGASCYAAK TLTAL EMFEAARSIM WLGDCAK+
Sbjct: 626 VIADDSELFGASCYAAKVTLTALGEMFEAARSIMTWLGDCAKI 668
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 191/273 (69%), Gaps = 15/273 (5%)
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQEL 215
L++RQI++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFLGWFEPLR+ I+AEQEL
Sbjct: 45 LRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQEL 104
Query: 216 CKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHE 275
+ R +H PYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A QIGEA+EHE
Sbjct: 105 VSERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAACQIGEAVEHE 163
Query: 276 ARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 335
RI++F+EKTKKK + E+ A + K Q
Sbjct: 164 VRIHKFLEKTKKKNTKEVDKVVEAVDADIAK-------------EQERLRKKVTDLMKKQ 210
Query: 336 KNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKH 395
K +Q +V+ +D +PWGQ+A KVGS L++L I+TA+IQPPA+Q GD P+IRPAF H
Sbjct: 211 KIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTH 270
Query: 396 TLKNISTDSQNGSKRYGVIECDSLVQQGLEKSA 428
++ ++ + Q S+RYGVI+CD LV+QGL+++A
Sbjct: 271 EMRTVAREQQK-SRRYGVIKCDPLVRQGLDRTA 302
>M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Aegilops tauschii
GN=F775_25821 PE=4 SV=1
Length = 884
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 299/446 (67%), Positives = 351/446 (78%), Gaps = 49/446 (10%)
Query: 457 PSYVMRIHGAKQQRDAVKRAPVTQLNPVFE------ALNTLGSTKWRVNKRVLSVIDQIW 510
P++ + +++ +R V + +P+ AL+ LGSTKWRVNK+VLS++D+IW
Sbjct: 315 PAFTHEMRTVAREQQKSRRYGVIKCDPLVRQGLDRTALDNLGSTKWRVNKKVLSIVDRIW 374
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
+ GG LADLVDR DV LPE+ DTEDEAE++KW+WS+++ +KEN+ERHSQRCD+ELKLAVA
Sbjct: 375 SSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVA 434
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
RKMK+E GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF EGRPLG+SGL WLKIHL
Sbjct: 435 RKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHL 494
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
ANLY GGVDKL YDGRIAFTENHL+DIFDSAN+PLEGKRWWLEAEDPFQCLA C++L EA
Sbjct: 495 ANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEA 554
Query: 691 LRSPTPETTMSHMPVHQ-----------------DGSCNGLQHYAALGRDKLGAAAVNLI 733
LRSP+PET +SH+PVHQ DGSCNGLQHYAALGRDKLGA AVNL+
Sbjct: 555 LRSPSPETVISHIPVHQQQLHECRKDIQVQSKEEDGSCNGLQHYAALGRDKLGAVAVNLV 614
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLIN------------------ 775
G++PADVYSGIA RV+EIM+RDA+KDP + +A AR L++
Sbjct: 615 SGEKPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQFVSAILHDLISVIAFSW 674
Query: 776 --------QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAK 827
QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER I +D++LFGASCYAAK
Sbjct: 675 YLIDSPVIQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIAEDSELFGASCYAAK 734
Query: 828 TTLTALQEMFEAARSIMGWLGDCAKV 853
TLTAL EMFEAARSIM WLGDCAK+
Sbjct: 735 VTLTALGEMFEAARSIMTWLGDCAKI 760
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 194/282 (68%), Gaps = 15/282 (5%)
Query: 147 GMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR 206
G+ KY L++RQI++ETEAWE AA+EY+ELL DM + KLAPNLPY+KSLFLGWFEPLR
Sbjct: 85 GIGYSKYVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 144
Query: 207 NAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
+ I+AEQEL R +H PYFN LPADMMAVITMHKLMGLLMT + G GS +V+Q A
Sbjct: 145 DQIIAEQELVSQRGTRASHAPYFNMLPADMMAVITMHKLMGLLMTGS-GDGSVRVIQAAC 203
Query: 267 QIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXX 326
QIGEA+EHE RI++F+EKTKKK + E+ A + K
Sbjct: 204 QIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAK-------------EQERLRK 250
Query: 327 XXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP 386
QK +Q +V+ +D +PWGQ+A KVGS L++L I+TA+IQPPA+Q GD
Sbjct: 251 KVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDST 310
Query: 387 PDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSA 428
P+IRPAF H ++ ++ + Q S+RYGVI+CD LV+QGL+++A
Sbjct: 311 PEIRPAFTHEMRTVAREQQK-SRRYGVIKCDPLVRQGLDRTA 351
>I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 547
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 275/393 (69%), Positives = 324/393 (82%)
Query: 461 MRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
MR HG+++Q+D +K Q+ VFE L+ LG+TKWRVN+R+L V++ IWA GG +A LV
Sbjct: 1 MRTHGSRKQQDVMKNVNGAQMQKVFETLDILGNTKWRVNRRMLGVVESIWAGGGNIAGLV 60
Query: 521 DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFY 580
D KDVP P++ ED I++WK SV+ +K N ERHS RCD ELKL+VARKMKDE+GFY
Sbjct: 61 DCKDVPKPDKPPVEDLKLIQEWKCSVRKAKKINLERHSLRCDTELKLSVARKMKDEEGFY 120
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
YPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEF EGRPLGKSGL WLKIHLANLYAGG++K
Sbjct: 121 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 180
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
YDGR+ F E+H+ DIFDSA+ P+ G RWWL AEDPFQCLAACINL+EALRS +P + +
Sbjct: 181 HSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINLSEALRSSSPNSFI 240
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
SH+P+HQDGSCNGLQHYAALGRD L AAAVNL+ ++PADVY+ IA RV +IMRRD+ KD
Sbjct: 241 SHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAKEKPADVYTEIAVRVYDIMRRDSNKD 300
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFG 820
P T PNAL A+ L+ Q+DRKLVKQTVMTSVYGVTYIGAR+QIKRRL E+ I DD L+
Sbjct: 301 PDTFPNALLAKVLLGQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLGEKGLITDDRLLYA 360
Query: 821 ASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
ASCYAAK TL AL E+FEAAR IMGWLGDCAKV
Sbjct: 361 ASCYAAKVTLAALGEVFEAARGIMGWLGDCAKV 393
>A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) OS=Chrysanthemum
morifolium GN=NEP PE=3 SV=1
Length = 383
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/406 (66%), Positives = 328/406 (80%), Gaps = 24/406 (5%)
Query: 448 YDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVID 507
YD G + FLPSY+MR HG++QQ+DAV+ AP +Q+ ++EAL+TLGSTKWRVNKR+L+V++
Sbjct: 1 YDCGGHFFLPSYLMRTHGSRQQQDAVEDAPPSQMQKIYEALDTLGSTKWRVNKRLLNVVE 60
Query: 508 QIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
IWA GG +A LV+R+DV +P+ L++ED +EI++W+WSV+ +K N E HSQRCDIELKL
Sbjct: 61 SIWAAGGDIAGLVNRQDVSIPD-LNSEDSSEIKEWRWSVRKAKKMNQELHSQRCDIELKL 119
Query: 568 AV-ARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
+V AR+MKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRGILEF EGRPLGKSGL WL
Sbjct: 120 SVVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWL 179
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
+IHLANLY GV+KL YDGR+AF E+H+ +I DSA+ PL G RWWL AEDPFQCLAACIN
Sbjct: 180 RIHLANLYGSGVEKLSYDGRLAFVESHISEIIDSADNPLGGNRWWLTAEDPFQCLAACIN 239
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
LAE L+S +P T +SH+PVHQDGSCNGLQHYAALGRD + AAAVNL+ G++PADVYS IA
Sbjct: 240 LAETLKSSSPHTVISHLPVHQDGSCNGLQHYAALGRDTVEAAAVNLVAGEKPADVYSEIA 299
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
TR +I+ QV+RKLVKQTVMTSVYGVT++GAR+QIKRRL
Sbjct: 300 TRYADII----------------------QVNRKLVKQTVMTSVYGVTFVGAREQIKRRL 337
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+E+ I DD LF ASCYAA+ TL AL E+FEAAR M WLGDCAK
Sbjct: 338 QEKGHISDDQLLFSASCYAARVTLEALGEIFEAARGTMCWLGDCAK 383
>B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_925854 PE=4 SV=1
Length = 528
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/410 (68%), Positives = 321/410 (78%), Gaps = 40/410 (9%)
Query: 448 YDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVID 507
YDKGA+LFLPSYVMRIHGAKQQR+AVKRAP QL VFEAL+TLG+T+WRVNKRVLSV+D
Sbjct: 1 YDKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLQAVFEALDTLGNTRWRVNKRVLSVVD 60
Query: 508 QIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
+IW+ GG LADLVD DVPLPE+ +TEDEA ++KWKW ++ V+KEN ERH+QRCDIELKL
Sbjct: 61 RIWSNGGCLADLVDHSDVPLPEKPETEDEALLKKWKWKLRGVKKENKERHAQRCDIELKL 120
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
AVARKMKDE+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF EGRPLGKSGL WLK
Sbjct: 121 AVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 180
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IH+ANL+AGGVDKL Y+GRIAFTENHLDDIFDSA+KPL+GKRWWL AEDPFQ LA CINL
Sbjct: 181 IHIANLFAGGVDKLSYEGRIAFTENHLDDIFDSADKPLDGKRWWLHAEDPFQFLAVCINL 240
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
EALRS +PET +SH+PVHQDGSCNGLQHYAALGRDKLGAAAVNL+ G++PADVYSGIA
Sbjct: 241 TEALRSSSPETYISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 300
Query: 748 RVLEIMRRDAE----KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
R+ M E + + N H +N+I+Q + +K
Sbjct: 301 RLFNYMCVCVEWVRAQIIISYKNFFHMKNVISQASKGGIK-------------------- 340
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
LF + + + TLTAL EMFEAARSIM WLGDCAK+
Sbjct: 341 --------------LFELAWF--QVTLTALGEMFEAARSIMNWLGDCAKI 374
>M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400011152 PE=3 SV=1
Length = 471
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 235/316 (74%), Positives = 273/316 (86%)
Query: 538 EIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPY 597
E+++WKW V+ +K N E HSQRCD ELKL+VARK+KDE+GFYYPHNLDFRGRAYPMHP+
Sbjct: 2 ELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPH 61
Query: 598 LNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDI 657
LNHL SDLCRGILEF EGRPLGKSGL WLK+HLA+LYAGG++KLCYD RIAF ENH+DDI
Sbjct: 62 LNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDI 121
Query: 658 FDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHY 717
DSA+ PL G RWWL AEDP QCLAACINL+EAL+SP+P T +SH+P+HQDGSCNGLQHY
Sbjct: 122 LDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHY 181
Query: 718 AALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQV 777
AALGRD + AAAVNL+ G++PADVY+ IA RV I+R D+ KDP T+PNAL A+ LI+QV
Sbjct: 182 AALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQV 241
Query: 778 DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMF 837
DRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+ I+DD LF ASCYAAK TL AL E+F
Sbjct: 242 DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELF 301
Query: 838 EAARSIMGWLGDCAKV 853
+AAR M WLGDCAKV
Sbjct: 302 QAARGTMTWLGDCAKV 317
>D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleria gruberi
GN=NAEGRDRAFT_81702 PE=3 SV=1
Length = 933
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 276/712 (38%), Positives = 406/712 (57%), Gaps = 85/712 (11%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQE---- 214
+Q ++ET + + A Y++ L+ + + LP K + L W+EPL I +Q+
Sbjct: 130 KQKELETRSMDIAKARYRKDLKSATSRNQSACLPPAKKIMLEWYEPLTKIIREKQDEVNF 189
Query: 215 ------------LCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVV 262
++ Y + A+ +A+IT+H+L+ + G + V
Sbjct: 190 SCSKKKSSSTNTTTTTSQDNFAIPLYLTSISAEKLAIITLHELLASCLKER---GGSPVS 246
Query: 263 QGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXX 322
+ QIG+AI+ E + + +++T N ++ + K
Sbjct: 247 SISYQIGDAIQAEINVEK-LKRTNYFKLIIKNQMIYHNINKISKLKL------------- 292
Query: 323 XXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQI 382
+++ + +E V++GS L+QL + TA++ +N
Sbjct: 293 -------------------------NEYVTFTKEELVQLGSYLIQLALSTAHVPLISN-- 325
Query: 383 GDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDS--LVQQGLEKSARHMVIP-YMPML 439
P + PAF H +NI+ +S K GV+E D L G E A+ ++ P ++PML
Sbjct: 326 ---PKETVPAFIH--RNITRNS----KIIGVVEPDDNLLHLIGREHVAQEILYPNHLPML 376
Query: 440 VPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVN 499
VPPN WT G Y+ L +MR G+ Q +K A +LN + LNTL T+WR+N
Sbjct: 377 VPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSA---ELNDLLSGLNTLNETRWRIN 433
Query: 500 KRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQ 559
V + ++W GGGL +L R D LPEE +T+D +KWK +V+ ++ N HS
Sbjct: 434 PTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDPEIKKKWKRTVEKIKTHNRNLHSL 493
Query: 560 RCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLG 619
RCD+ LKL VA KD + FY+PHN+DFRGRAYP+ P+LNHLG+D+ RG+L F +G P+G
Sbjct: 494 RCDMLLKLKVAEDFKD-NTFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIG 552
Query: 620 KSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQ 679
K G+ WLKIHLANLY G DKL +D R+ F + ++++I DSA++PLEG RWWL++E+P+Q
Sbjct: 553 KRGIFWLKIHLANLY--GKDKLPFDERVQFVDEYINEIIDSADQPLEGNRWWLKSENPWQ 610
Query: 680 CLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPA 739
LAAC+ LAE LRSP PE +SH+P+ DGSCNGLQHYAALGRD LGA VNL+ +P
Sbjct: 611 TLAACVELAECLRSPNPEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALHVNLLPTSKPM 670
Query: 740 DVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGAR 799
DVY G VLE++++ E+D K N L A+ L V R +KQTVMTSVYGVT++GAR
Sbjct: 671 DVYVG----VLEVVKKHIERDMKAG-NKL-AKLLHGNVYRSTIKQTVMTSVYGVTFVGAR 724
Query: 800 DQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+QI++RLKE+ + +D +F + Y A TL +L E+F +A++IM WL DCA
Sbjct: 725 EQIQKRLKEKKEVPED-DVFACASYLASITLKSLGEVFSSAQNIMEWLNDCA 775
>K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoccus prasinos
GN=Bathy10g00540 PE=3 SV=1
Length = 1109
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 289/787 (36%), Positives = 417/787 (52%), Gaps = 94/787 (11%)
Query: 157 KKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELC 216
++RQ ++E E+ D + Y+E+ E M + NLP ++ L ++EPL + EQ +
Sbjct: 169 RERQRRVENESVNDEIKRYREMSEQMAQVGAGANLPAVRQLLTSFYEPLMVGVEREQNMI 228
Query: 217 KDTRL---RLTHGPYFNELPADMMAVITMHKLMGLLM---TNTNG------------VGS 258
+ R +GPY L AD +AVI++H ++ +LM T G GS
Sbjct: 229 SEGVPGFDRRVYGPYLQLLGADKIAVISLHTIISMLMRGVEKTRGDVFRDHSREHGEAGS 288
Query: 259 AKVVQGASQIGEAIEHEARIYRFMEKTK----------------KKTKATDNCEGESDLA 302
K V+ AS +G IE E + R + K +T + GE+++
Sbjct: 289 VKFVRLASSLGRVIEAEVNLSRLQTREKLLSARYRAGLINMEDIVETFNQERHAGENEMI 348
Query: 303 PVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQ-QALGIVRGRD-------DWKPWG 354
++ Q++ + L VR D WG
Sbjct: 349 AEREREEKIANIDREIREKNLIKESDIRSTMLQRDSTKKLKSVRAVSEQAKKALDNADWG 408
Query: 355 QEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR-PAFKHTLKNISTDSQNGSK---- 409
+KVG+ ++ +++D I+ P + + I PAF H ++ ++ G K
Sbjct: 409 SVLHLKVGAAIIAIVLDVCKIKVPGPETAETGEKIEVPAFYHDY-SLEPNAYQGWKQKAS 467
Query: 410 ---RYGVIEC-DSL---VQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
R G + DS V AR + + PM+VPP W Y+KG YL S VMR
Sbjct: 468 PNNRSGTVHWHDSFFRFVHSATLARARSAITRHKPMIVPPRPWESYNKGGYLNSNSVVMR 527
Query: 463 IHGAK------QQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK---- 512
+ ++ Q + +R V + + VF ALN LGST W +N +L VI+Q+W +
Sbjct: 528 GNYSRDGPSDGQMKLLAER--VGEYDNVFGALNVLGSTAWVINTDILEVIEQVWREKKYA 585
Query: 513 ---GGGLADLVDRKDVPLPEELDTE-----------------DEAEIRKWKWSVKNVRKE 552
GGG+A++ R ++ LP +E E+ ++ + ++
Sbjct: 586 GGFGGGIANIPPRAELNLPNWPSSEFRLRRERNGPLYATALPSSREVGEFMRAFNRAKQT 645
Query: 553 NNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 612
N E HSQRCD +KL VAR+MK+E+ Y+PHN+DFRGRAY MH +LNH+GSD CRG L+F
Sbjct: 646 NRELHSQRCDFAIKLQVAREMKNEERIYFPHNVDFRGRAYTMHAHLNHIGSDFCRGTLKF 705
Query: 613 GEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPL--EGKRW 670
+ +PLG++GL WL I ANLY GG DKL R+ F++ +L+ I SA PL EG W
Sbjct: 706 ADAKPLGENGLDWLFIQCANLYGGGADKLPLHQRVEFSKLNLEKIKKSAEDPLGPEGS-W 764
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
W +A+DP+QCLA C+ + +A+ S P M ++PVHQDGSCNGLQHYAALGRD G AV
Sbjct: 765 WQDADDPWQCLATCMEIIKAINSKDPAKYMCNLPVHQDGSCNGLQHYAALGRDFAGGRAV 824
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAE----KDPKTNPNALHARNLINQVDRKLVKQTV 786
NL+ D+ ADVY+GIA + +I+++D E KD ++ A+ LI+QVDRKLVKQTV
Sbjct: 825 NLVPADRGADVYTGIANVLRDIVQKDIENCDYKDEESVERMKLAKLLIDQVDRKLVKQTV 884
Query: 787 MTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGW 846
MTSVYGVT++GAR QI RLKER E ++ + + YAAK TL AL +MF+ AR +MGW
Sbjct: 885 MTSVYGVTFVGARMQISARLKERVGFESESVRYRVAAYAAKRTLDALNDMFQNAREVMGW 944
Query: 847 LGDCAKV 853
L CA V
Sbjct: 945 LTHCASV 951
>A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_34669 PE=3 SV=1
Length = 922
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 279/725 (38%), Positives = 391/725 (53%), Gaps = 52/725 (7%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK 217
++Q + E A E Y+EL + LP ++ L ++ PL A+ EQE +
Sbjct: 63 RKQREAENLAVEREVMRYKELARKTFAAGIGAQLPVVQKLLASFYVPLVEALTEEQEKIR 122
Query: 218 DTRL---RLTHGPYFNELPADMMAVITMHKLMGLLMT-NTNGVGSAKVVQGASQIGEAIE 273
R +G Y L D +AV+T+H + LM + G+AK + A Q+G A++
Sbjct: 123 GNVPGVDRRVYGHYLGLLEPDKLAVLTLHATLSTLMKGDGRNNGAAKFISVADQVGSAVQ 182
Query: 274 HEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXX 333
E +E+ + KA S L +
Sbjct: 183 AEVN----LERMRSAEKAAKEAFRRSRLVNTEGNVKEIDDAAEHRINLALDTSKMNTIKS 238
Query: 334 XQKN-QQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPA 392
K+ +QAL + WG+E ++K+G+ L+ L++TA I P + G PA
Sbjct: 239 VSKHARQAL-------ENAEWGREIRLKIGTVLLTALMNTAKIGVPDEK---GELLTLPA 288
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGL--EKSARHMVIP--YMPMLVPPNNWTGY 448
F H K YG++ + + + E R ++P + PM++PP W Y
Sbjct: 289 FYHDYKEAG---------YGMLHWHDSIYRFINTETMTRAALVPVRHFPMVIPPRYWERY 339
Query: 449 DKGAYLFLPSYVMR------------IHGAKQQ-RDAVKRAPVTQLNPVFEALNTLGSTK 495
+KG YL + MR I +++ R+A Q PV +ALN LG T
Sbjct: 340 NKGGYLRADNLCMRGKYSNEGPSRAQIAALEEKAREADASGEPVQYQPVLDALNALGQTA 399
Query: 496 WRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPE--ELDTEDEAEIRKWKWSVKNVRKEN 553
W++N VL +++++WA+GGG+A++ R ++ LP + E+ + SV+ +K N
Sbjct: 400 WQINTDVLPIVEEVWARGGGVAEVPLRAELQLPRWPGGGLPGKGEVIDFLQSVRKTKKSN 459
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
E HSQRCD +KL VAR+MK+E Y+PHNLDFRGRAY MH +LNH+GSDLCRG+L F
Sbjct: 460 MELHSQRCDFLIKLQVAREMKNEPNIYFPHNLDFRGRAYTMHVHLNHIGSDLCRGLLRFN 519
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
E +PLG+ GL W+ I A L+ G DKL D R+ F ++ ++D+ SA PL WW E
Sbjct: 520 EKKPLGERGLRWMHIQCATLFGNGADKLPMDERVQFIKDRIEDVRASAQDPLAKDAWWQE 579
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
AE+P+QCLA CI L +AL P MS++PVHQDGSCNGLQHYAALGRD G AVNL+
Sbjct: 580 AEEPWQCLATCIELDKALELSDPTQFMSNLPVHQDGSCNGLQHYAALGRDLHGGEAVNLV 639
Query: 734 GGDQPADVYSGIATRVLEIMRRDAE----KDPKTNPNALHARNLINQVDRKLVKQTVMTS 789
D+ ADVY+GIA + I+ D + +D + NA A +L +DRKLVKQTVMTS
Sbjct: 640 PADRGADVYTGIANVLKRIVAEDIKLIDSEDEEDVNNAKLAMSLAQHIDRKLVKQTVMTS 699
Query: 790 VYGVTYIGARDQIKRRLKERCAIEDDAQL-FGASCYAAKTTLTALQEMFEAARSIMGWLG 848
VYGVT+IGAR QI RL+ER A+ED+ L + S YAAK TL AL MF AR +MGWL
Sbjct: 700 VYGVTFIGARAQIYSRLREREAMEDNELLRYRVSNYAAKRTLDALNNMFSNARDVMGWLT 759
Query: 849 DCAKV 853
CA +
Sbjct: 760 TCATI 764
>C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_83775 PE=3 SV=1
Length = 899
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 295/773 (38%), Positives = 404/773 (52%), Gaps = 109/773 (14%)
Query: 144 MDGGMTSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFE 203
++G K + L++RQ + E A + Y+E R++ LP + L G+F
Sbjct: 15 VEGHEADPKMRELEERQRRNEILAVDREVERYKEEARITRRRGGGAELPLGRRLLQGFFA 74
Query: 204 PLRNAIVAEQELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMT------ 251
PL +AI EQE RL R +GP+ L D +AVIT+H ++ LM
Sbjct: 75 PLTSAIRLEQE---HVRLKVRGVDRSNYGPFLLMLNPDKLAVITLHTVISQLMKGEQMFG 131
Query: 252 --NTNGVGSAKVVQGASQIGEAIEHEARIYRFMEK---TKKKTKATDNCEGESDLAPVKK 306
N G K V+ +G++++ E + R ++ TKK+ + N D
Sbjct: 132 EPNEAQAGMCKFVRAVEMLGQSVQAEVNLARLRQRARLTKKRYLESKNGPHVHD------ 185
Query: 307 GXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRD-------DWKPWGQEAQV 359
++ + L VRG + WG +
Sbjct: 186 ----------------------RFMKVNMESLKTLTTVRGVARLARTALNDSDWGGVTRS 223
Query: 360 KVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSL 419
KVG+ L++LL+ TA I+ P DG PAF H ++ + RYGVI
Sbjct: 224 KVGAALVKLLLTTARIRVPGP---DGELIEVPAFYHDY------VKHKAHRYGVISWHDA 274
Query: 420 VQQGLEKSA--RHMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMR------------- 462
++ A R + P YMPM+ PP WT ++ G YL S VMR
Sbjct: 275 FFTFMDDEAMIRATLSPVRYMPMVTPPRPWTRFNAGGYLRTESIVMRGHYTTHGPSKRQM 334
Query: 463 --IHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
+HG + + RA + PV +ALN LG T WR+N+ VL V++++WA GGG AD+
Sbjct: 335 LALHGEQSGAELDGRA--AKFQPVLDALNVLGRTAWRINEDVLRVMEEVWATGGGRADVP 392
Query: 521 DRKDVPLPE----------------ELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIE 564
R++VP P ++ + S+ ++ N E HSQRCD
Sbjct: 393 PRENVPDPTWPANPYGLRRSRGQLAATALPSRQDVAGFIHSLNRTKQRNRELHSQRCDFL 452
Query: 565 LKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLH 624
+KL VA++M+DED Y+PHN+DFRGRAY MH +LNHLGSD+CRG L F + RPLG GL
Sbjct: 453 IKLQVAKEMRDEDRIYFPHNIDFRGRAYTMHVHLNHLGSDICRGALVFADARPLGNDGLD 512
Query: 625 WLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPL--EGKRWWLEAEDPFQCLA 682
WL I ANLYAGGVDKL D R + E+ + + SA PL +G +WL+AEDP+QCLA
Sbjct: 513 WLYIQAANLYAGGVDKLPMDERRQWIEDRVHLLEQSARDPLGPDGG-FWLDAEDPWQCLA 571
Query: 683 ACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVY 742
C + A S P M +PVHQDGSCNGLQHYAALGRD+ G VNL+ D+P DVY
Sbjct: 572 CCFEIERARASGDPPAYMCRLPVHQDGSCNGLQHYAALGRDEAGGEQVNLMPRDRPGDVY 631
Query: 743 SGIATRVLEIMRRDAE--KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARD 800
+GIA + I+ DA+ +DP+T A+ L VDRKLVKQTVMTSVYGVT+IGAR
Sbjct: 632 TGIANVLKRIVAEDAKNPEDPETQALAI---ALAPHVDRKLVKQTVMTSVYGVTHIGARQ 688
Query: 801 QIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
QI+ RLKER A+ED+ + + YAA+ TL AL +F AR +M WL +CA+V
Sbjct: 689 QIQNRLKERGAVEDENLRYKMANYAARRTLDALANLFVNARDVMAWLAECARV 741
>Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleria sp. TES-2005
PE=3 SV=1
Length = 968
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/718 (38%), Positives = 403/718 (56%), Gaps = 91/718 (12%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELC-- 216
+Q ++ET + + A Y++ L+ + LP K + L W+EPL I +Q+
Sbjct: 159 KQKELETRSMDIAKERYRKDLKSATNRNQGACLPPAKKILLEWYEPLTKLIREKQDEVNF 218
Query: 217 ----KDT--------RLRLTHGP--------YFNELPADMMAVITMHKLMGLLMTNTNGV 256
K T T G + + A+ +A+IT+H+L+ + G
Sbjct: 219 SAKKKSTISAADSASAANTTSGAVDHFSIPLHLTSISAEKLAIITLHELLASCLRERAG- 277
Query: 257 GSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXX 316
+ V + +G+AI+ E + +K K T++ +
Sbjct: 278 --SAVSSLSYVVGDAIQAEINM--------EKLKRTNHFK-------------------- 307
Query: 317 XXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQ 376
N L ++ +++ + +E +++GS L+QL +DTA +
Sbjct: 308 ----------LILKNQMVYHNINKLSKLK-LNEYVSFSKEELIRLGSYLIQLTLDTAKVP 356
Query: 377 PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD-SLVQ-QGLEKSARHMVIP 434
+ D P + PAF H KN+S K G+IE D +L+Q G E + ++ P
Sbjct: 357 -----LVDNPKESVPAFIH--KNVS----RAGKVIGMIEPDENLIQLVGREHLTQEILFP 405
Query: 435 -YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGS 493
++PMLVPPN WT G Y+ L +MR G+ Q +K A +T L LNTL
Sbjct: 406 NHLPMLVPPNPWTSSVSGGYIALKVMIMRTRGSHLQSYILKSAELTDL---LSGLNTLNE 462
Query: 494 TKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKEN 553
+KW VN +V + ++W +GGGL +L R D LPEE +T+D +KWK + + +++ N
Sbjct: 463 SKWIVNPKVYETVLRVWNEGGGLGELPSRFDDALPEEPETDDPEVKKKWKRTCEKIKQHN 522
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
HS RCD+ LKL VA KD + FY+PHN+DFRGRAYP+ P+LNHLG+D+ RG+L F
Sbjct: 523 RNLHSLRCDMLLKLKVAEDFKD-NAFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFE 581
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
+G P+GK G+ WLKIHLANLY G DKL +D R+ F + ++ ++FDSA+ PL+G RWWL+
Sbjct: 582 KGMPIGKRGIFWLKIHLANLY--GKDKLPFDERVQFIDQNMAEVFDSADVPLDGNRWWLQ 639
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
+E+P+Q LAAC+ L LRS PE +S++P+ DGSCNGLQHYAALGRD LGA VNL+
Sbjct: 640 SENPWQTLAACVELTNCLRSEKPEEYISNLPIQMDGSCNGLQHYAALGRDNLGALHVNLL 699
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
+P DVY G VLE++++ E+D K N L A+ L V R +KQTVMTSVYGV
Sbjct: 700 PTSKPMDVYVG----VLEVVKKHIERDMKAG-NKL-AKLLHGNVYRSTIKQTVMTSVYGV 753
Query: 794 TYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
T++GAR+QI++RLKE+ + +D +F + Y A TL +L E+F +A++IM WL DCA
Sbjct: 754 TFVGAREQIQKRLKEKKEVPED-DVFACASYLASITLKSLGEVFSSAQNIMEWLNDCA 810
>Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum polycephalum
GN=rpoM PE=2 SV=1
Length = 997
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 271/719 (37%), Positives = 399/719 (55%), Gaps = 83/719 (11%)
Query: 160 QIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDT 219
Q +E A + A Y++ L+ + + + +L + + W+ P R++I A + K +
Sbjct: 178 QADLELNAIDQATEYYRKALDGILRARQGASLGPTRRIIDSWYGPFRDSINAA--VRKMS 235
Query: 220 RLRLTHGPYFNE--LPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEAR 277
+H N L +D + VIT+H+ +G+L+ NT GV +Q A +G A++ E
Sbjct: 236 ARASSHSLVANLKLLSSDKLPVITLHQTLGMLLANTEGV---PFMQVAFAVGRAVQAEVN 292
Query: 278 IYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKN 337
R + K+ ++ L K G N
Sbjct: 293 FERMKAEDKQAFRS---------LLKSKSGITVTLV-----------------------N 320
Query: 338 QQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR------- 390
+A ++ D W + V++G+ L++ L+ +A I+ +++ ++
Sbjct: 321 IKAKYTLKKHD----WDSKTIVQLGAFLLKHLMLSAKIEKNVDKVLSKANNLAVSSSERQ 376
Query: 391 -------PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMV-----IPYMPM 438
AF H K S ++R G+++C + + ++ H++ +PM
Sbjct: 377 LADDEYVSAFVHYYKFYRQGST--TRRQGLLKCHENIFKYVDDG--HVIKEVLDARLLPM 432
Query: 439 LVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRV 498
+V P W G YL++PS +MR + Q ++ A +T VF ALN LG T WRV
Sbjct: 433 VVKPVPWVSPTVGGYLYVPSVLMRAQEHQAQYASLWNADLTT---VFAALNALGETGWRV 489
Query: 499 NKRVLSVIDQIWAKGGGLADLVDRKDVPLPE---ELDTEDEAEIRKWKWSVKNVRKENNE 555
N+ V ++ ++W GGGLA L R D+ P+ +LDT DE++ R WK + + +R+ NN+
Sbjct: 490 NEEVYHIVKKVWDDGGGLAALPTRTDITFPDPPDDLDTNDESK-RTWKKTERKIRQLNND 548
Query: 556 RHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEG 615
+S RCD KL+VA + D FY PHN+DFRGRAYP+ P+LN LGSD+CRG+L F E
Sbjct: 549 LNSLRCDTTYKLSVAETLLHMD-FYLPHNVDFRGRAYPIPPHLNQLGSDMCRGLLVFKEK 607
Query: 616 RPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAE 675
+PLG +GL WLKIHLANLY GVDK+ +D R+ F + ++D +FDSA+ PL+G++WW+ A+
Sbjct: 608 KPLGPTGLRWLKIHLANLY--GVDKVPFDARVNFVDKNIDKVFDSADHPLDGEQWWVGAD 665
Query: 676 DPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGG 735
DP+QCL C LA+ALRSP PE +S MPVHQDGSCNGLQHYAALG D++G VNL+
Sbjct: 666 DPWQCLGTCFELAKALRSPNPEEFLSCMPVHQDGSCNGLQHYAALGGDEIGGRKVNLVPS 725
Query: 736 DQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTY 795
D P DVYSG+AT V + + DA + + L ++DRK+VKQTVMTSVYGVTY
Sbjct: 726 DAPQDVYSGVATVVAKRVHEDAIAGHEL------GKLLDGKLDRKVVKQTVMTSVYGVTY 779
Query: 796 IGARDQIKRRLKER-CAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
IGAR QI L ++ DD QL+ AS Y T AL +MF AR+IM WL DCA++
Sbjct: 780 IGARLQIHNALSDKDIEWRDDDQLYHASAYITNHTFEALNQMFLGARNIMKWLADCARI 838
>Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment)
OS=Polysphondylium pallidum GN=mtRNAP PE=3 SV=1
Length = 862
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/504 (44%), Positives = 331/504 (65%), Gaps = 37/504 (7%)
Query: 359 VKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR---PAFKHTLKNISTDSQNGSKRYGVIE 415
KVGS +++ ++D+ I N+ DG DI PAF + + N +K+YGVI
Sbjct: 226 TKVGSFMVKSIMDSCMI----NKYIDGE-DIDEKVPAFYYKYR------YNNNKKYGVIS 274
Query: 416 CDSLVQQGLEKSARHMVIPYM-----PMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQR 470
C V +++ H ++ M PM+VPP WT +KG YL P ++MR +G+K Q+
Sbjct: 275 CHDNVYSLMDEG--HFLVEAMNARLLPMVVPPQPWTHPNKGCYLQYPCFIMRTNGSKLQK 332
Query: 471 DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPE- 529
++ ++ +T ++E LN LG W+ N++++S++ + W KGGG+ADL R D LPE
Sbjct: 333 TSLYQSDLTN---IYEGLNVLGEVPWKTNEKMMSILLEAWEKGGGIADLPSRYDFELPES 389
Query: 530 --ELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 587
+ D +DE R + ++ V+ NN+ HS RCD KL VA++++ E FY+PHN+DF
Sbjct: 390 PSQEDLQDEKVKRDFNKKLRKVKGANNDLHSLRCDTLYKLNVAKQLQ-EYTFYFPHNVDF 448
Query: 588 RGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRI 647
RGR+YP+ P+LNH+GSD CR L+F E + LG+ G WLK+ +ANL+ GVDK+ ++ R+
Sbjct: 449 RGRSYPIPPHLNHMGSDFCRSTLKFAEEKELGERGFEWLKVQVANLF--GVDKVSFEDRV 506
Query: 648 AFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQ 707
AFT ++++I+DSA++PL+GKRWWL+A+ P+Q LAACI L +A+RS P T S +P+HQ
Sbjct: 507 AFTMENIENIYDSADRPLDGKRWWLKADSPWQTLAACIELTDAIRSGNPTTFKSSLPIHQ 566
Query: 708 DGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNA 767
DG+CNGLQHYAALG D+LGA VNL+ +P DVY+G+A V +I+ DA +
Sbjct: 567 DGTCNGLQHYAALGGDELGALKVNLLPSPKPQDVYTGVAQMVAQIVHEDALAGDEL---- 622
Query: 768 LHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAK 827
A+ L +++RK++KQTVMTSVYGVT++GAR QI+ L ++ I D+A LF A+ Y +K
Sbjct: 623 --AKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIENALSDKYQI-DEATLFKATTYLSK 679
Query: 828 TTLTALQEMFEAARSIMGWLGDCA 851
TT +L +MF ARSIM WL CA
Sbjct: 680 TTFASLDKMFIGARSIMAWLAQCA 703
>C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromonas pusilla
(strain CCMP1545) GN=MICPUCDRAFT_17826 PE=3 SV=1
Length = 838
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 273/695 (39%), Positives = 382/695 (54%), Gaps = 72/695 (10%)
Query: 195 KSLFLGWFEPLRNAIVAEQ-ELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLM- 250
++ + EPL AI EQ E+ K R +GP+ L D +AVIT+H ++ LM
Sbjct: 22 RNFLHNFLEPLSRAIEKEQAEIRKKVPGADRTNYGPFMLMLNPDKLAVITLHAVISQLMM 81
Query: 251 -------TNTNG-VGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLA 302
+ NG VG +K V+ ++GEA++ E + R K + K + D E E
Sbjct: 82 GDDRVKFSGDNGQVGKSKFVRVVERLGEAVQAEVNLSRL--KQRGKVRPKDPSERERRFR 139
Query: 303 PVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVG 362
G R +D WG A+VK+G
Sbjct: 140 EETAGVSAKSLSKLTTVRSVAKFAR-----------------RALND-SDWGMTARVKLG 181
Query: 363 SCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQ 422
S L +LL++TA I+ P + G+ +I+PAF+H + + N +RYG++
Sbjct: 182 SVLAKLLVETAKIEVPDPESGE--LEIKPAFEHHYEYV-----NRQQRYGMVSWHPAFFD 234
Query: 423 GLE----KSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAK----------- 467
+E + A+ ++ YMPM+ PP W+ +D+G YL ++VMR + +
Sbjct: 235 YIEHEDMRHAQMSLVRYMPMVTPPRPWSRFDQGGYLCSETFVMRGNYTRLGPSWGQIMAL 294
Query: 468 --QQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDV 525
+Q+ + PV +ALN LG T W VN+R + V+ ++W GGG+A + R+ V
Sbjct: 295 LGEQKRSDSDGECASYQPVLDALNVLGKTPWVVNERTVDVMQKVWDDGGGIAGVPPRRTV 354
Query: 526 PLPEELDTED--EAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPH 583
P D + A++R V++EN E HSQRCD +KL VA++M+DE+ ++PH
Sbjct: 355 DEPVWPDPGEYVNAKVR--------VKRENRELHSQRCDFLIKLKVAQEMRDEEKIFFPH 406
Query: 584 NLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLY-AGGVDKLC 642
N+DFRGRAY MH +LNH+GSD+CRG L F E RPLG++GL WL + ANLY AGGVDKL
Sbjct: 407 NIDFRGRAYTMHAHLNHIGSDVCRGALLFQEARPLGENGLDWLYVQAANLYAAGGVDKLP 466
Query: 643 YDGRIAFTENHLDDIFDSANKPLEGK----RWWLEAEDPFQCLAACINLAEALRSPTPET 698
D R + + LD I SA PL +WLEAE+P+QCLA I +A A+ S P +
Sbjct: 467 LDERREWMKTRLDRIKASARDPLCADDANCAFWLEAENPWQCLATFIEIAAAVDSGDPAS 526
Query: 699 TMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE 758
+PVHQDGSCNGLQHYAALGRD G VNL D P DVY+G+A VL+ M +
Sbjct: 527 YACRLPVHQDGSCNGLQHYAALGRDIGGGEQVNLTPRDSPGDVYTGVAN-VLKRMVAEDA 585
Query: 759 KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQL 818
D A A L +DRKLVKQTVMTSVYGVT++GAR QI+ RL+ER AIED++
Sbjct: 586 ADASDPETAATAAALAPHIDRKLVKQTVMTSVYGVTHVGARQQIQSRLRERGAIEDESLR 645
Query: 819 FGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ + YA++ TL AL +F AR +M WLG+CA+V
Sbjct: 646 YRTANYASRRTLDALSNLFVNAREVMSWLGECARV 680
>Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreococcus tauri
GN=Ot09g03980 PE=3 SV=1
Length = 973
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 277/754 (36%), Positives = 387/754 (51%), Gaps = 75/754 (9%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK 217
++Q + E A E Y+E + LP ++ L ++ PL +AI E E K
Sbjct: 79 RKQREAENLACEREVARYKEFARKTFAAGIGAQLPVVQKLLASFYVPLVDAIKEEHEKIK 138
Query: 218 DTRL---RLTHGPYFNELPADMMAVITMHKLMGLLMT--------------NTNGVGSAK 260
R +G Y L + +AV+T+H + LM +T GSAK
Sbjct: 139 SNVPGVDRRVYGHYLALLEPEKLAVLTLHTTLSTLMKGDLRLDVPIFRGDDDTAASGSAK 198
Query: 261 VVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXX 320
+ A Q+G ++ E + R K +A ++ L
Sbjct: 199 FITVAEQVGIVVQAEVNLGRMRAAEKIAKEAYKKSRQQTTLTADGGNAASKDVEELVEQR 258
Query: 321 XXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPAN 380
++ A + + WG+E +VKVG+ L+ L++TA I P
Sbjct: 259 INLTLDTSKMNTIKSVSKHARNALENAE----WGREIRVKVGTVLLNALMNTAKIGVPEE 314
Query: 381 QIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGL--EKSARHMVIP--YM 436
+G PAF H D + G YG++ + + + E R ++P +
Sbjct: 315 ---NGGVLTLPAFYH-------DYREGG--YGMLHWHDSIYRFINTETMTRAALVPVKHF 362
Query: 437 PMLVPPNNWTGYDKGAYLFLPSYVMR--------------IHGAKQQRDAVKRAPVTQLN 482
PM+VPP W Y+ G YL + MR AK + +K PV
Sbjct: 363 PMIVPPREWVRYNNGGYLRANTLCMRGKYSNEGPSRAQVQALEAKAREAELKNEPVL-YQ 421
Query: 483 PVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPE------ELDTED- 535
PV +ALN LG T W+VN VL +++++WA+GGG+A++ R ++ LP L ++
Sbjct: 422 PVLDALNALGRTPWQVNTDVLPIVEEVWARGGGIAEVPLRAELQLPRWPGGSYALRSDKN 481
Query: 536 -----------EAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
+ E+ ++ SV+ +K N E HSQRCD +KL VAR+MK+E Y+PHN
Sbjct: 482 RFQLLASGLPGKGEVIEFLQSVRKTKKSNMELHSQRCDFLIKLQVAREMKNEPNIYFPHN 541
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
LDFRGRAY MH +LNH+GSDLCRG+L F E +PLG+ GL W+ I A L+ G DKL D
Sbjct: 542 LDFRGRAYTMHVHLNHIGSDLCRGLLRFSEKKPLGERGLRWMYIQCATLFGNGADKLPMD 601
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R+ F + ++ + SA PL WW +AE+P+QCLA CI L +AL P +S++P
Sbjct: 602 ERVQFIVDQIEQVRASAQDPLAKGAWWQDAEEPWQCLATCIELDKALELEDPTQFLSNLP 661
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDGSCNGLQHYAALGRD G AVNL+ D+ ADVY+GIA + I+ D + N
Sbjct: 662 VHQDGSCNGLQHYAALGRDLHGGEAVNLVPADRGADVYTGIANVLKRIVADDIKLIDSDN 721
Query: 765 ----PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQL-F 819
NA A L + +DRKLVKQTVMTSVYGVT+IGAR QI RL+ER +ED+ L +
Sbjct: 722 EEDVANAKLAMALAHHIDRKLVKQTVMTSVYGVTFIGARAQIYSRLREREVMEDNELLRY 781
Query: 820 GASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
S YAA+ TL AL MF AR +MGWL DCA +
Sbjct: 782 RVSTYAARRTLDALNNMFSNARDVMGWLTDCAAI 815
>D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polysphondylium pallidum
GN=rpmA PE=3 SV=1
Length = 1010
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/454 (46%), Positives = 309/454 (68%), Gaps = 23/454 (5%)
Query: 406 NGSKRYGVIECDSLVQQGLEKSARHMVIPYM-----PMLVPPNNWTGYDKGAYLFLPSYV 460
N +K+YGVI C V +++ H ++ M PM+VPP WT +KG YL P ++
Sbjct: 279 NNNKKYGVISCHDNVYSLMDEG--HFLVEAMNARLLPMVVPPQPWTHPNKGCYLQYPCFI 336
Query: 461 MRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
MR +G+K Q+ ++ ++ +T ++E LN LG W+ N++++S++ + W KGGG+ADL
Sbjct: 337 MRTNGSKLQKTSLYQSDLTN---IYEGLNVLGEVPWKTNEKMMSILLEAWEKGGGIADLP 393
Query: 521 DRKDVPLPE---ELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDED 577
R D LPE + D +DE R + ++ V+ NN+ HS RCD KL VA++++ E
Sbjct: 394 SRYDFELPESPSQEDLQDEKVKRDFNKKLRKVKGANNDLHSLRCDTLYKLNVAKQLQ-EY 452
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
FY+PHN+DFRGR+YP+ P+LNH+GSD CR +L+F E + LG+ G WLK+ +ANL+ G
Sbjct: 453 TFYFPHNVDFRGRSYPIPPHLNHMGSDFCRSMLKFAEEKELGERGFEWLKVQVANLF--G 510
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
VDK+ ++ R+AFT ++++I+DSA++PL+GKRWWL+A+ P+Q LAACI L +A+RS P
Sbjct: 511 VDKVSFEDRVAFTMENIENIYDSADRPLDGKRWWLKADSPWQTLAACIELTDAIRSGNPT 570
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
T S +P+HQDG+CNGLQHYAALG D+LGA VNL+ +P DVY+G+A V +I+ DA
Sbjct: 571 TFKSSLPIHQDGTCNGLQHYAALGGDELGALKVNLLPSPKPQDVYTGVAQMVAQIVHEDA 630
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQ 817
+ A+ L +++RK++KQTVMTSVYGVT++GAR QI+ L ++ I D+A
Sbjct: 631 LAGDEL------AKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIENALSDKYQI-DEAT 683
Query: 818 LFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
LF A+ Y +KTT +L +MF ARSIM WL CA
Sbjct: 684 LFKATTYLSKTTFASLDKMFIGARSIMAWLAQCA 717
>F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyostelium
fasciculatum (strain SH3) GN=rpmA PE=3 SV=1
Length = 1078
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/498 (44%), Positives = 312/498 (62%), Gaps = 29/498 (5%)
Query: 360 KVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFK---HTLKNISTDSQNGSKRYGVIEC 416
++G+ +++ ++++ +I QI DG + PAF ++ + S + +
Sbjct: 446 RIGTFILRCIMESCFIN--KYQINDGESEQVPAFYIDYRFVRGVRVSSLHLHQN-----V 498
Query: 417 DSLVQQG--LEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVK 474
SL+Q G L + A + +PM+V P W + G YL P+++MR +G+K Q ++
Sbjct: 499 LSLIQDGHDLREVANARL---LPMVVTPEPWDSPNNGCYLHYPTFIMRTNGSKLQTSSII 555
Query: 475 RAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTE 534
A L+ ++E LN LG W +N+ VL +I W GGG+ DL R D LP +
Sbjct: 556 SA---DLSKIYEGLNILGEVPWNINRPVLDIILAAWESGGGIGDLPSRFDYELPLAAEYS 612
Query: 535 DEAEIRKWKWS-VKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYP 593
+ AE RK VK V++ N++ HS RCD+ KL V +++++ D FY+PHN+DFRGR+YP
Sbjct: 613 ESAEQRKKHAKLVKKVKQLNHDLHSLRCDLSYKLDVGKQLREHD-FYFPHNVDFRGRSYP 671
Query: 594 MHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENH 653
+ P+LNHLGSD CR +L F E +PLG GL WLK+HLANL GVDK+ +D RIAF ++H
Sbjct: 672 IPPHLNHLGSDFCRAMLTFAEKKPLGARGLMWLKVHLANL--SGVDKVSFDDRIAFVDSH 729
Query: 654 LDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNG 713
+ D++DSA+ PL G RWWL A+ P+Q LA CI LA A+RS P MS +P+HQDGSCNG
Sbjct: 730 MADVYDSADNPLNGARWWLAADKPWQALATCIELANAVRSGDPANFMSSLPLHQDGSCNG 789
Query: 714 LQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNL 773
LQHYAALG D+ GA VNL+ +P DVYSG+A V + DA + A+ L
Sbjct: 790 LQHYAALGGDEFGAFKVNLLPSPKPQDVYSGVAQLVSATVEHDAANGHEV------AKAL 843
Query: 774 INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTAL 833
+ +V RK++KQTVMTSVYGVTYIGAR QI+ L+E+ ++DD +F AS Y AK T +L
Sbjct: 844 LGKVQRKIIKQTVMTSVYGVTYIGARAQIQNALEEKYQMDDDF-VFQASSYLAKETFKSL 902
Query: 834 QEMFEAARSIMGWLGDCA 851
+MF ARSIM WL CA
Sbjct: 903 DKMFLGARSIMAWLSQCA 920
>I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_14577 PE=3 SV=1
Length = 1239
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/681 (38%), Positives = 367/681 (53%), Gaps = 63/681 (9%)
Query: 188 APNLPYMKSLFLGWFEPLRNAIVAEQELCKDT----RLRLTHGPYFNELPADMMAVITMH 243
A +L +K + W + L I E + C+ R +GP+ LP D ++++T+
Sbjct: 301 AMHLTPLKRIMWTWHQNLTLLIDEEIKRCEVAAPRDHERRAYGPFLKVLPKDTLSIVTIL 360
Query: 244 KLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLA 302
+L+ L N++G+G K + +G+A+E E + M+K K + N L
Sbjct: 361 ELLRL--HNSSGIGDGMKTARAILDVGKAVEMEHNAVQ-MKKHAKSQQNIQNVLSSGRL- 416
Query: 303 PVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKP-WGQEAQVKV 361
+ +++ + +W P W + KV
Sbjct: 417 --------------------------FNMAVNKAHKKIVNNDENSAEWNPVWPTTTRAKV 450
Query: 362 GSCLMQLLIDTAYIQPPANQIGDGPPDIR--PAFKHTLKNISTDSQNGSKRYGVIE-CDS 418
GS L LL++ A I P+ G + PAF HT + + KR G+I+ D
Sbjct: 451 GSVLTSLLLEAAKIPVPSRDPETGKKIVENIPAFFHTYQYVL------GKRVGIIKFADQ 504
Query: 419 LVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAP 477
L + + R + P +PMLVPP W Y+ G YL S MRI + +Q + +A
Sbjct: 505 LTEMLSREPIRDTLHPRLLPMLVPPRPWLSYNSGGYLQTKSVCMRIKDSAEQLIYLHKAS 564
Query: 478 VTQL-NPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLP-----EEL 531
L V L+ LGST+W+VNK V +I + W KG +AD+ + P P E
Sbjct: 565 ERDLLQDVLAGLDVLGSTRWKVNKNVFKIILEAWNKGEAIADIPPAVNGPTPLPPKPENY 624
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
T+ +A+ W VK ++ HS RCD+ K+ AR + Y+PHN+DFRGRA
Sbjct: 625 HTDPKAKF-NWVNEVKQIQTTEKNNHSLRCDVNYKVETARAFLNLP-MYFPHNMDFRGRA 682
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPM P LNHLG+DLCRG+L F E +PLG+ G WLKIHLANLY G DK + R FT
Sbjct: 683 YPMPPTLNHLGNDLCRGLLHFEEAKPLGEKGWRWLKIHLANLY--GYDKHSFTEREQFTL 740
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
+++D+I D+ + PL GK+WWL+A+ P+QCLAAC +AEA+RS PE S +PVHQDG+C
Sbjct: 741 DNIDNIIDAVDNPLTGKQWWLKADSPWQCLAACFEVAEAVRSGKPEEFKSRLPVHQDGTC 800
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALG D GA AVNL GD+PADVY+G+A V + + + AE+ + +A+
Sbjct: 801 NGLQHYAALGGDLAGARAVNLAAGDRPADVYTGVADMVNKYIDKAAEEGNE------YAK 854
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
L V RK+VKQTVMT+VYGVT++GAR QI+ RLKE I D +++ S Y AK +
Sbjct: 855 ILQGNVSRKVVKQTVMTNVYGVTFVGARAQIENRLKENPDIPRD-KVYALSSYLAKAVFS 913
Query: 832 ALQEMFEAARSIMGWLGDCAK 852
+L EMF AR I WL D A+
Sbjct: 914 SLGEMFNGARQIQDWLTDSAR 934
>J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC
7840 / NCYC 2677 / UAMH 7654) GN=A1Q1_03513 PE=3 SV=1
Length = 1321
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/698 (36%), Positives = 387/698 (55%), Gaps = 46/698 (6%)
Query: 168 WEDAAREYQEL-LEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHG 226
W A EY E ++DMRK+ + + S W Q KD + L
Sbjct: 385 WYLALTEYLEQDIDDMRKRIESTKPEQLDSRATRW---------GPQSGMKDDQKLL--- 432
Query: 227 PYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKT 285
Y + LP +A+IT+ +LM M + GV K+++G +G AIE E R
Sbjct: 433 -YLSTLPPKRLALITILELM--RMIGSGGVNDGMKLLRGVMGVGRAIEAEYRADMIRSIA 489
Query: 286 KKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVR 345
+K++ P + K +
Sbjct: 490 GEKSRLWQKVIDPKTQKPSRLNVESTWKEIGREREKEAKESSDGAAAQSVKAGPESDL-- 547
Query: 346 GRDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPANQ--IGDGPPDIRPAFKHTLKNIST 402
R W P W Q+ +G+ L++ LI TA + G+ + +PAF H+ + +
Sbjct: 548 -RAVWTPPWSGMVQMSIGTHLVEALIKTARVVRHGTDPLTGEQVTEKQPAFAHSFEYVR- 605
Query: 403 DSQNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYV 460
++ GVI+ + +V + L S R ++ P ++PMLVPPN+W +++G YL +P+ +
Sbjct: 606 -----GRKLGVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNSWKAWNQGPYLTIPTTM 660
Query: 461 MRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL 519
MR + +Q++ ++ A + L PVF L+ L ST WR+N+ V V+ + W G +AD+
Sbjct: 661 MRFKDSVEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADI 720
Query: 520 ---VDRKDVPLPEELDTEDEAEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
++ ++ +PE+ D ++ R ++ ++K + + + H++RC L +AR +
Sbjct: 721 PATAEKCEIVIPEKPDDPNDPTKRYEYVQAMKQLSLQQRKNHAERCKYNYNLEIARSYIN 780
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
D FY PHNLDFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLANLY
Sbjct: 781 -DVFYIPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY- 838
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK +D R+ F+++H++DIFDSA+ PL+GKRWWL+AEDP+QCLAAC LA ALRS
Sbjct: 839 -GYDKASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGD 897
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+YS + V E +
Sbjct: 898 PSKFESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEA 957
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
D +K P AL +N + RK+VKQTVMT+VYGVT++GARDQI ++L+ R + D
Sbjct: 958 DQKKG---VPTALLIKNPLG---RKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSD 1011
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
++ S Y AK L ++ +F AR+I WL + A++
Sbjct: 1012 -DVWITSAYIAKKVLNSIGSLFFGARAIQDWLTNTARL 1048
>K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain CBS 8904) GN=A1Q2_04313 PE=3 SV=1
Length = 1321
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/698 (36%), Positives = 386/698 (55%), Gaps = 46/698 (6%)
Query: 168 WEDAAREYQEL-LEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHG 226
W A EY E ++DMRK+ + + S W Q KD + L
Sbjct: 385 WYLALTEYLEQDIDDMRKRIESTKPEQLDSRATRW---------GPQSGMKDDQKLL--- 432
Query: 227 PYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKT 285
Y + LP +A+IT+ +LM M + GV K+++G +G AIE E R
Sbjct: 433 -YLSTLPPKRLALITILELM--RMIGSGGVNDGMKLLRGVMGVGRAIEAEYRADMIRSIA 489
Query: 286 KKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVR 345
+K++ P + K +
Sbjct: 490 GEKSRLWQKVIDPKTQKPSRLNVESTWKEIGREREKEAKESSDGAAAQSVKAGPESDL-- 547
Query: 346 GRDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPANQ--IGDGPPDIRPAFKHTLKNIST 402
R W P W Q+ +G+ L++ LI TA + G+ + +PAF H+ + +
Sbjct: 548 -RAVWTPPWSGMVQMSIGTHLVEALIKTARVVRHGTDPLTGEQVTEKQPAFAHSFEYVR- 605
Query: 403 DSQNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYV 460
++ GVI+ + +V + L S R ++ P ++PMLVPPN W +++G YL +P+ +
Sbjct: 606 -----GRKLGVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNPWKAWNQGPYLTIPTTM 660
Query: 461 MRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL 519
MR + +Q++ ++ A + L PVF L+ L ST WR+N+ V V+ + W G +AD+
Sbjct: 661 MRFKDSVEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADI 720
Query: 520 ---VDRKDVPLPEELDTEDEAEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
++ ++ +PE+ D ++ R ++ ++K + + + H++RC L +AR +
Sbjct: 721 PATAEKCEIVIPEKPDDPNDPTKRYEYVQAMKQLSLQQRKNHAERCKYNYNLEIARSYIN 780
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
D FY PHNLDFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLANLY
Sbjct: 781 -DVFYIPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY- 838
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK +D R+ F+++H++DIFDSA+ PL+GKRWWL+AEDP+QCLAAC LA ALRS
Sbjct: 839 -GYDKASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGD 897
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+YS + V E +
Sbjct: 898 PSKFESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEA 957
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
D +K P AL +N + RK+VKQTVMT+VYGVT++GARDQI ++L+ R + D
Sbjct: 958 DQKKG---VPTALLIKNPLG---RKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSD 1011
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
++ S Y AK L ++ +F AR+I WL + A++
Sbjct: 1012 -DVWITSAYIAKKVLNSIGSLFFGARAIQDWLTNTARL 1048
>L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acanthamoeba castellanii
str. Neff GN=ACA1_101460 PE=3 SV=1
Length = 965
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 268/744 (36%), Positives = 387/744 (52%), Gaps = 109/744 (14%)
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQE- 214
L+ + + ET++ E A Y+++ + +++ LA L + WFEPL AI AEQ
Sbjct: 126 LENLEYEWETKSVEKAVERYKKISKSLKQLGLAFELLQGNQILGHWFEPLCAAIRAEQNA 185
Query: 215 -LCKDTRLRLTHGP-----------------YFNELPADMMAVITMHKLMGLLMTNTNGV 256
L K + P Y +P + +AVIT+H+ M ++ + +
Sbjct: 186 ALLKTSAADAAASPTKGKKKTQKAEDRELSAYLVTIPPEKLAVITIHETMCEILKSHHPE 245
Query: 257 GSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXX 316
G A +G A+E+E R ++ K + P K
Sbjct: 246 G-APFAALVVAVGRAVEYEYNCERLAKEGWKPQLRNRSA------TPTK----------- 287
Query: 317 XXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK----PWGQEAQVKVGSCLMQLLIDT 372
QQ ++R + + WG K+GS L+Q L+ T
Sbjct: 288 ---------------------QQICSLIRTQSRAQFEDASWGAALHAKIGSLLVQQLLGT 326
Query: 373 AYI------------QPPANQIGDGPPDIRPAFKHTLKNISTDSQNG------SKRYGVI 414
A I Q ++ G P RPAF + + + N K G +
Sbjct: 327 ATIARKAEEADVAAAQSSPARLLSGAPRKRPAFVTKEEALLEPAFNHHQAMLRGKLTGFL 386
Query: 415 ECDSLVQQGLEKSARH---MVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
C V +E M YMPMLV P W ++G YL + V+R G++ Q +
Sbjct: 387 GCHEQVLALMEHEEVQRGVMQARYMPMLVEPQPWVAPNQGGYLVARTQVLRAKGSRMQTE 446
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVP-LPEE 530
++ A ++ V+E LN L ST WR+N R+ VI + W GGG+ADL R ++P L
Sbjct: 447 VLRSA---SMDKVYECLNLLSSTPWRINNRMHEVICEAWDNGGGIADLPSRTNLPELEPP 503
Query: 531 LDTEDEAEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRG 589
D + E++ K+ K + N HS RCD VA++ +D FYYPHN+DFRG
Sbjct: 504 ADYYSDLEVKQKFDRERKKAKIANYNLHSLRCD------VAKECQDRT-FYYPHNMDFRG 556
Query: 590 RAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAF 649
R YP+ P+LNHLG DLCRG+L F EG+PLG+ LK+HLAN++ G DK+ ++ R+ F
Sbjct: 557 RTYPIPPHLNHLGQDLCRGLLTFAEGKPLGE-----LKVHLANVF--GNDKITFEDRVRF 609
Query: 650 TENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDG 709
EN+++ I DSA+ PL G+RWWL+A+ P+QCLAA I L A S PET +S +P+HQDG
Sbjct: 610 VENNMEHIMDSASNPLGGQRWWLKADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDG 669
Query: 710 SCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALH 769
SCNGLQHYAALG D++GA VNL+ ++P DVYSG+ V+ + DA +
Sbjct: 670 SCNGLQHYAALGGDEMGARQVNLLPSERPQDVYSGVVELVVRRLEDDAANGVEI------ 723
Query: 770 ARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTT 829
A+ L+ +VDRK++KQTVMTSVYGVT+IGAR QI+ LK++ + DD +F AS Y A +T
Sbjct: 724 AQRLLGKVDRKVIKQTVMTSVYGVTFIGARQQIENALKDKGKVSDD-DMFLASRYLATST 782
Query: 830 LTALQEMFEAARSIMGWLGDCAKV 853
++++EMF AR IM WL DCA +
Sbjct: 783 FSSIKEMFSGAREIMTWLSDCATL 806
>Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/638 (38%), Positives = 360/638 (56%), Gaps = 35/638 (5%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + +
Sbjct: 341 KNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERILPPNHDDM 400
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H + +
Sbjct: 401 QDIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR-- 458
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL VM
Sbjct: 459 ----GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVM 514
Query: 462 RIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
R + +Q+ +K A L PVF L+ L ST WR+N+RV V+ + W KG +AD+
Sbjct: 515 RYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIP 574
Query: 521 ---DRKDVPLPEELDTEDE-AEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
D+ PE+ D+ D+ ++R ++ K V + + H++RC + +AR
Sbjct: 575 PSEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL- 633
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLAN+Y
Sbjct: 634 KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY- 692
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLAAC LA ALRSP
Sbjct: 693 -GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLAACFELAAALRSPD 751
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++I+ +
Sbjct: 752 PSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNK 807
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I +
Sbjct: 808 VVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE 865
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+F S Y AKT L + ++F A++IM WL A++
Sbjct: 866 -HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=2
Length = 1202
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGGRILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDIFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+YSG V++
Sbjct: 748 RSPIPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYSG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 360/638 (56%), Gaps = 35/638 (5%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + +
Sbjct: 341 KNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERILPPNHDDM 400
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H + +
Sbjct: 401 QDIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR-- 458
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL VM
Sbjct: 459 ----GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVM 514
Query: 462 RIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
R + +Q+ +K A L PVF L+ L ST WR+N+RV V+ + W KG +AD+
Sbjct: 515 RYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIP 574
Query: 521 ---DRKDVPLPEELDTEDE-AEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
D+ PE+ D+ D+ ++R ++ K V + + H++RC + +AR
Sbjct: 575 PSEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL- 633
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLAN+Y
Sbjct: 634 KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY- 692
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA ALRSP+
Sbjct: 693 -GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPS 751
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++I+ +
Sbjct: 752 PSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNK 807
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I +
Sbjct: 808 VVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE 865
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+F S Y AKT L + ++F A++IM WL A++
Sbjct: 866 -HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1202
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIM--RMSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGDKILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1202
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIM--RMSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGDKILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 359/638 (56%), Gaps = 35/638 (5%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + +
Sbjct: 341 KNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERILPPNHDDM 400
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H + +
Sbjct: 401 QDIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR-- 458
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL VM
Sbjct: 459 ----GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVM 514
Query: 462 RIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
R + +Q+ +K A L PVF L+ L ST WR+N+RV V+ + W KG +AD+
Sbjct: 515 RYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIP 574
Query: 521 ---DRKDVPLPEELDTEDE-AEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
D+ PE+ D+ D+ ++R ++ K V + + H++RC + +AR
Sbjct: 575 PSEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL- 633
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLAN+Y
Sbjct: 634 KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY- 692
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA ALRSP
Sbjct: 693 -GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPN 751
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++I+ +
Sbjct: 752 PSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNK 807
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I +
Sbjct: 808 VVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE 865
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+F S Y AKT L + ++F A++IM WL A++
Sbjct: 866 -HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLSTSARL 902
>Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1202
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGDKILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNQKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 359/638 (56%), Gaps = 35/638 (5%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + +
Sbjct: 341 KNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERILPPNHDDM 400
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H + +
Sbjct: 401 QDIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR-- 458
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL VM
Sbjct: 459 ----GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVM 514
Query: 462 RIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
R + +Q+ +K A L PVF L+ L ST WR+N+RV V+ + W KG +AD+
Sbjct: 515 RYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIP 574
Query: 521 ---DRKDVPLPEELDTEDE-AEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
D+ PE+ D+ D+ ++R ++ K V + + H++RC + +AR
Sbjct: 575 PSEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL- 633
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLAN+Y
Sbjct: 634 KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY- 692
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA ALRSP
Sbjct: 693 -GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPN 751
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++I+ +
Sbjct: 752 PSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNK 807
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I +
Sbjct: 808 VVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE 865
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+F S Y AKT L + ++F A++IM WL A++
Sbjct: 866 -HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1180
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGDKILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1180
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGDKILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1180
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGDKILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=1
Length = 1180
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 341 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGGGILPPN 396
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 397 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEY 456
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 457 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 510
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 511 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 570
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 571 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 630
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 631 SYL-KDIFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 689
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 690 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAAL 747
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 748 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 803
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 804 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 861
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 862 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia osmundae (strain CBS
9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo05575 PE=3
SV=1
Length = 1375
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/735 (36%), Positives = 389/735 (52%), Gaps = 72/735 (9%)
Query: 150 SYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRK---QKLAPNLPYMKSLFLGWFEPLR 206
+Y L +RQ ++E A + A ++Q E M Q+++ ++SL GW E L
Sbjct: 390 AYHSIDLYERQRQLEDSAMQAAVVQFQTEREKMNTEVAQRVSMQQRSLQSLMTGWIEELT 449
Query: 207 NAIVAEQE-----------LCKDTRL---------RLTHGPYFNELPADMMAVITMHKLM 246
+ QE K+T + R YF LP D +A +T+ L
Sbjct: 450 VVLTRVQEQMRLLIDSDAVTTKETVIEGCKIFATDRAADDIYFLLLPPDKLAYLTVSVL- 508
Query: 247 GLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKK 306
L NT G KV + IG+A+E E + E + + + E++ A
Sbjct: 509 --LSHNTPGAAMQKVTRCVMAIGKAVEVEHYAMKLQESHRLELADALHAVREAEAA---- 562
Query: 307 GXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLM 366
++ +A R+ + W + + ++G+ +
Sbjct: 563 ----------------NGVTESRVVARIWRDVRARQGDSSREVF--WSHQTRARIGAMCL 604
Query: 367 QLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEK 426
L +TA IQ A G +I+PAF T + + ++ G+I+ ++ V + L+K
Sbjct: 605 HFLCETAKIQRSAVIDGQEIIEIQPAFVQTYQF------SAGQKIGIIKFNAAVTERLDK 658
Query: 427 -SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNP 483
S + P Y+PMLVPP WT ++KGAYL P V+RI + +Q +K+A + QL+
Sbjct: 659 DSMLSTLTPRYLPMLVPPRPWTAHNKGAYLMHPVSVLRIKDSMEQTAYLKQASDSGQLDE 718
Query: 484 VFEALNTLGSTKWRVNKRVLSVIDQIWAKG---GGL--ADLVDRKDVPLPEELDTEDEAE 538
F +L+ LGST W VN+ V VI W G GG+ AD ++ P P +
Sbjct: 719 AFASLDYLGSTAWNVNRDVFGVIASAWNSGLTIGGIPVADPLNAIKDPEPPAGGFTSPRQ 778
Query: 539 IRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 598
+ VK + + +S RCD+ KL +AR +E FY+PHN+DFRGRAYP+ P L
Sbjct: 779 QDTHRAEVKAAEMQRRQHYSIRCDLNYKLEIARAYLNER-FYFPHNMDFRGRAYPIPPNL 837
Query: 599 NHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIF 658
+H+G DLCRG+L F E + LG +GL WL +HLAN++ G DK R F ++HL DIF
Sbjct: 838 SHIGDDLCRGLLTFAERKRLGATGLRWLHVHLANMF--GFDKASLAAREQFAKDHLTDIF 895
Query: 659 DSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYA 718
DSA+KPL+G RWWL+AE+P+QCLA C L++ALRSP PE S +PV QDGSCNGLQHYA
Sbjct: 896 DSADKPLDGARWWLKAEEPWQCLATCFELSKALRSPVPEDYRSSLPVQQDGSCNGLQHYA 955
Query: 719 ALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVD 778
ALG D GA VNLI GD P+DVY+G+ V+ + +DA N N L A +L ++
Sbjct: 956 ALGGDMAGAGQVNLIAGDAPSDVYTGVCNLVIGAVEQDA-----ANKNEL-ALHLKGKIT 1009
Query: 779 RKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFE 838
RK++KQTVMT+VYGVTYIGA QI+R+LK+R ++ + + + Y + TL ++ +F
Sbjct: 1010 RKVIKQTVMTTVYGVTYIGASRQIERQLKDRGDVDAEVR-HKCALYLTEKTLQSIGTLFA 1068
Query: 839 AARSIMGWLGDCAKV 853
A +I WL C ++
Sbjct: 1069 GAAAIQLWLTTCGRL 1083
>J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_07409 PE=3 SV=1
Length = 1324
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 359/642 (55%), Gaps = 43/642 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 410 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 462
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P KN+ +
Sbjct: 463 KNVAGVDSYHWLKTIDP----QTQKPSRQLIGSVWKKIGEQANQAKRVGKNEGGGILPPN 518
Query: 347 RDD----WKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
DD W P W + Q+ VGS L+ L+ A ++ A G+ +++PAF H +
Sbjct: 519 HDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEY 578
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLP 457
+ K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL
Sbjct: 579 VR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHS 632
Query: 458 SYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR + +Q+ +K A L PVF L+ L ST WRVN+RV V+ + W +G +
Sbjct: 633 VPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPI 692
Query: 517 ADLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVAR 571
AD+ D+ PE+ D+ D+ + ++ K V + + H++RC + +AR
Sbjct: 693 ADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIAR 752
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLA
Sbjct: 753 SYL-KDIFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLA 811
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
N+Y G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA AL
Sbjct: 812 NVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAAL 869
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
RSP P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++
Sbjct: 870 RSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVD 925
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
I+ + E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R
Sbjct: 926 IVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGD 983
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I + +F S Y AKT L + ++F A++IM WL A++
Sbjct: 984 IAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 1024
>R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ichthyophaga EXF-994
GN=J056_000290 PE=4 SV=1
Length = 1311
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 258/732 (35%), Positives = 394/732 (53%), Gaps = 62/732 (8%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNL---PYMKSLFLGWF-------EPLRNA 208
RQ +E A+E A ++ + ++ K +A L P K ++ W E L
Sbjct: 315 RQRLLEESAYETAKARFEHEMNELEKAGVATALSGQPLQKLMWEWWKKLSVLIGEKLDRN 374
Query: 209 IVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQ 267
+ E K+ + P+ + L ++ MA+IT+ +++ L + T G+ K +
Sbjct: 375 MHLETHKTKEDKFINEISPFLSLLSSEKMALITVLEILRL--SGTGGIAEGMKTTRALLS 432
Query: 268 IGEAIE--HEARIYRF------------MEKTKKKTKATDNCEGESDL---APVKKGXXX 310
+G+A+E H A I + ++ K+K + D+ + E +L +P G
Sbjct: 433 VGKAVENEHHAEILKSKHGVSLKGVEADAKQVKRKLRYFDHKKAEKELDLKSPEFTGLID 492
Query: 311 XXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIV---RGRDDWKP-WGQEAQVKVGSCLM 366
+++AL V R W P W Q ++KVGS L+
Sbjct: 493 EAMGTSTPDEHFAYPHDIA-------SERALARVHEERMNRAWTPNWSQMIRIKVGSFLV 545
Query: 367 QLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEK 426
L++ A I A++ G+ + +PAF + + + ++ GVI+ +++V L+K
Sbjct: 546 DSLMECATITRIADRDGEEIKETQPAFSQSYQYVR------GRKLGVIKVNTVVADRLDK 599
Query: 427 SARHMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNP 483
I ++PMLV P W YD G YLF ++ MR + +Q+ + +A + P
Sbjct: 600 DPLGSTIHPRHLPMLVKPKPWLRYDNGGYLFHKNFAMRFKDSNEQQSYIAKASNEGTMEP 659
Query: 484 VFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL---VDRKDVPLPEELDTEDEAEIR 540
V L+ LG T W VN++V +V+ Q W G G+A + P+ D +
Sbjct: 660 VLAGLDVLGQTPWNVNQKVFAVVKQAWNSGEGVAKIPPATTHTPDPIKPSNYESDPKQRS 719
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
+ S+K V E HS RCD KL +A+ +E FY+PH LDFRGRAYP+ P+LNH
Sbjct: 720 NYLISMKAVVNERRNNHSIRCDTNYKLEIAKAFLNE-TFYFPHTLDFRGRAYPIPPHLNH 778
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
+G DL RG+L+F E RPLG+ G+ WLKIHLAN+Y G DK ++ R F + HL DI+DS
Sbjct: 779 IGDDLSRGLLKFAETRPLGEKGMRWLKIHLANVY--GYDKASFNERENFADEHLADIYDS 836
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A++PL+G+ WWL+A+DP+QCLAAC + AL S P S +PVHQDG+CNGLQHYAAL
Sbjct: 837 ADRPLDGRGWWLKADDPWQCLAACYEIQAALESSNPLAYESSLPVHQDGTCNGLQHYAAL 896
Query: 721 GRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRK 780
G D +GA VNL D+P+DVY+ +A V+ +RRDA+ T+ NA A+ L ++ RK
Sbjct: 897 GGDPMGAKQVNLEQADRPSDVYTAVADLVIADIRRDAQ----TDDNAF-AKLLEGKITRK 951
Query: 781 LVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAA 840
+VKQTVMT+VYGVT+IGARDQI ++L++R I + ++ + Y AK L ++ ++F A
Sbjct: 952 VVKQTVMTTVYGVTFIGARDQIDKQLQDRGDIPREL-IYSTASYLAKKVLRSIGDLFSGA 1010
Query: 841 RSIMGWLGDCAK 852
+I WL A+
Sbjct: 1011 NAIQKWLSMSAR 1022
>K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ultimum
GN=PYU1_G002918 PE=3 SV=1
Length = 1018
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 269/753 (35%), Positives = 387/753 (51%), Gaps = 113/753 (15%)
Query: 154 KMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQ 213
+ L RQ+++E +E A +++ +R+ A N K L W P R I EQ
Sbjct: 166 RRLYARQLRLECSVYEMAMEKHETSTLKVRQIGRASNTNAAKDLIRNWMIPAREFIENEQ 225
Query: 214 ELCKDTRLRL---THGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGE 270
+ +D + + +GP L AD++A M+ ++ + + +G K ++ A +G+
Sbjct: 226 KKIRDGKHSMDSNIYGPALLMLKADVLAATGMNVMLNTCLGDAHG---PKFIKLALAMGK 282
Query: 271 AIEHEARIYRFMEKTKKK-------TKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
AI+ E + + E+ +K+ + T E E A +K
Sbjct: 283 AIQEEIIVQK--ERAEKRGGENKFYLQVTARIESEFVKAKMKAY---------------- 324
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
DD W + +KVG+ L+ + + +I P + G
Sbjct: 325 -----------------------HDDVGGWDKRINLKVGAALIDCIQRSCFI--PVEK-G 358
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQG-LEKSARHMVIP----YMPM 438
+PAF H ++R GVI+ + L ++P Y+PM
Sbjct: 359 SKEMSNQPAFVHDY------VFERNRRAGVIKIHPTIANAVLSTKPGANILPWTARYLPM 412
Query: 439 LVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRV 498
LVPP NW G YL L + +MR + Q D VKR + QL F++LN L S W +
Sbjct: 413 LVPPKNWDSVVNGGYLKLHTKIMRQRDSAWQMDCVKRGEMDQL---FKSLNLLASVPWVI 469
Query: 499 NKRVLSVIDQIWAKGGGLADLVDRKDVPLPE-ELDTEDEAEIR-KWKWSVKNVRKENNER 556
N VL VI ++W GGG DL R D+ PE + + E +AE R ++ V+ +++ N E
Sbjct: 470 NTDVLDVILKVWENGGGFGDLPQRTDIEPPEWKAEYEHDAEKRDTYEKMVRKIQQRNQEL 529
Query: 557 HSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGR 616
HS RCD KL VA + K E YYP+N+DFRGR YP+ P LNHLGSDL R +L F + +
Sbjct: 530 HSLRCDTLYKLQVAEEFKHEKALYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRK 589
Query: 617 PLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPL-EGK-RWWLEA 674
PLGK+GL W+KIHLAN++ GVDK +D R+ FT+ +L SA P EG WW +A
Sbjct: 590 PLGKNGLRWMKIHLANVF--GVDKCSFDERVEFTDANLSKAIASACDPFGEGDCAWWKDA 647
Query: 675 EDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIG 734
+ PF L C L AL SP PE S++P+HQDGSCNGLQHYAALGRD LG VNL+
Sbjct: 648 DYPFLALGVCFELKRALESPDPEKYESNIPIHQDGSCNGLQHYAALGRDALGGQQVNLVP 707
Query: 735 GDQPADVYSGIATRVLEIMRRDAEKD-PKTNPNA-------------------------- 767
+P+DVY+G+AT+V+ + RDA + P+ P+
Sbjct: 708 APRPSDVYTGVATQVMRKVERDAAMELPEIIPDMERILDDDSPAERARKMAIKEQWNLRR 767
Query: 768 --LHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI-------EDDAQL 818
+A+ L+ + RK+VKQTVMTSVYGVTYIGAR QI RL+E E + Q+
Sbjct: 768 RKKYAQFLLGTITRKVVKQTVMTSVYGVTYIGARKQISARLEEVFLTKGMMMDSELEDQI 827
Query: 819 FGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ ASCYAA+ T+ ++ ++F +AR+IM WLGDCA
Sbjct: 828 YHASCYAAEVTMESMGDLFTSARNIMTWLGDCA 860
>Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/638 (38%), Positives = 358/638 (56%), Gaps = 35/638 (5%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + +
Sbjct: 341 KNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERILPPNHDDM 400
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ ++ A G+ +++PAF H + +
Sbjct: 401 QDIWTPAWSRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYEYVR-- 458
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL VM
Sbjct: 459 ----GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVM 514
Query: 462 RIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
R + +Q+ +K A L PVF L+ L ST W++N+RV V+ + W KG +AD+
Sbjct: 515 RYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIP 574
Query: 521 ---DRKDVPLPEELDTEDE-AEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
D+ PE+ D+ D+ ++R ++ K V + + H++RC + +AR
Sbjct: 575 PSEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL- 633
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLAN+Y
Sbjct: 634 KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY- 692
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA ALRSP
Sbjct: 693 -GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPN 751
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++I+ +
Sbjct: 752 PSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNK 807
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I +
Sbjct: 808 VVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE 865
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+F S Y AKT L + ++F A++IM WL A++
Sbjct: 866 -HIFVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptococcus gattii
serotype B (strain WM276 / ATCC MYA-4071) GN=CGB_I1030W
PE=3 SV=1
Length = 1180
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/638 (38%), Positives = 358/638 (56%), Gaps = 35/638 (5%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M+ + G+ KV++G +G+A+E E F +T
Sbjct: 288 YLSLLPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETE-----FRAETI 340
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + +
Sbjct: 341 KNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERILPPNHDDM 400
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ ++ A G+ +++PAF H + +
Sbjct: 401 QDIWTPAWSRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYEYVR-- 458
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
K+ GVI+ + +V L K +VI ++PMLV P WT ++KG YL VM
Sbjct: 459 ----GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVM 514
Query: 462 RIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
R + +Q+ +K A L PVF L+ L ST W++N+RV V+ + W KG +AD+
Sbjct: 515 RYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIP 574
Query: 521 ---DRKDVPLPEELDTEDE-AEIR-KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
D+ PE+ D+ D+ ++R ++ K V + + H++RC + +AR
Sbjct: 575 PSEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL- 633
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG++GL WL+IHLAN+Y
Sbjct: 634 KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY- 692
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C LA ALRSP
Sbjct: 693 -GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPN 751
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G V++I+ +
Sbjct: 752 PSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNK 807
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
E+D K + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I +
Sbjct: 808 VVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE 865
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+F S Y AKT L + ++F A++IM WL A++
Sbjct: 866 -HIFVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 902
>F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo laibachii Nc14
GN=AlNc14C137G7135 PE=3 SV=1
Length = 1012
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/741 (35%), Positives = 387/741 (52%), Gaps = 95/741 (12%)
Query: 154 KMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQ 213
K L RQI++E ++ A ++ + +D+ K A + ++L +GW EP I EQ
Sbjct: 166 KRLFARQIRLECAIYDMAVEKHLAVRQDVGKLGRASQVNAAQNLVVGWMEPAIALISNEQ 225
Query: 214 ELCKDTRLRL---THGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGE 270
+ L +GP L A ++A ++++ ++ + ++ G A+ ++ A +G
Sbjct: 226 RDVLAGKRSLDSSIYGPALLLLDAKVLAALSINTMLNNCLVDSKG---ARFIKLALALGN 282
Query: 271 AIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
++ + + K+K K + E + +G
Sbjct: 283 IVQEH------ICENKRKRK-----DSEKYFLSLVRGIQNDVF----------------- 314
Query: 331 XXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYI-----QPPANQIG-- 383
+K+ + + G W + +KVG+ L+ + + Y+ Q ++
Sbjct: 315 ----RKHMENVYTTAGY-----WDKRLNLKVGAALIDFIQRSCYVPDRLLQAAGRKVHGT 365
Query: 384 ------DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-- 434
+ PP AF H ++R G+ + D++ L V+P
Sbjct: 366 LEEHDPEKPPKKEQAFVHCY------YYERNRRSGMFKMHDTIFNLILNTDPGMNVLPWT 419
Query: 435 --YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLG 492
Y+PMLVPP W + G YL L + +MR Q D VKRAP L VF LN L
Sbjct: 420 ARYLPMLVPPKRWENPNNGGYLKLHTKIMRQRDIVWQMDCVKRAP---LQEVFTTLNLLA 476
Query: 493 STKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVK---NV 549
W +N+ +L VI +IW +GGG DL R+D P P+ EDE + K + K V
Sbjct: 477 EVPWVINQEILDVILRIWQEGGGFGDLPSREDFPFPDN-KPEDEEDPEKRQALAKAHAKV 535
Query: 550 RKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 609
R+ N E HS RCD KL VA++ ++E Y+P+NLDFRGR YP+ P LNHLGSD+ R +
Sbjct: 536 RQRNRELHSLRCDTLYKLQVAQEFRNEKEIYFPYNLDFRGRVYPIPPNLNHLGSDMSRSL 595
Query: 610 LEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKP--LEG 667
L F + +PLGK GL WLKIHLAN++ GVDK +D R+AFTE++L +F SA P +
Sbjct: 596 LLFRDRKPLGKDGLRWLKIHLANVF--GVDKCSFDERVAFTESNLTKVFASARDPHGVGD 653
Query: 668 KRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGA 727
WW AE PF L C L AL SP PET +S++PVHQDGSCNGLQHYAALGRD G
Sbjct: 654 AVWWKTAEYPFLALGVCFELKRALNSPDPETYLSNIPVHQDGSCNGLQHYAALGRDLKGG 713
Query: 728 AAVNLIGGDQPADVYSGIATRVLEIMRRDA------EKDPKTNPNALH----ARNLINQV 777
VNL+ +P DVY +A +V++++ RDA + P+ + H A L+ +
Sbjct: 714 EQVNLVPASRPGDVYIKVAEQVMDLVNRDANLEIPEDATPERKLSLAHRKRCATFLLGTI 773
Query: 778 DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER-------CAIEDDAQLFGASCYAAKTTL 830
R++VKQTVMTSVYGVT+IGAR QI+ RL+E E D Q++ +SCYAA+ T+
Sbjct: 774 TRRVVKQTVMTSVYGVTFIGARKQIQARLQEANLSNGNLSDEEMDQQVYDSSCYAAEITM 833
Query: 831 TALQEMFEAARSIMGWLGDCA 851
+L+ +F +AR+IM WLGDCA
Sbjct: 834 ESLRNLFTSARNIMEWLGDCA 854
>R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squalens (strain
LYAD-421) GN=DICSQDRAFT_130383 PE=4 SV=1
Length = 1273
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/516 (43%), Positives = 316/516 (61%), Gaps = 38/516 (7%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAY----IQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGS 408
W Q +VKVGS L+ ++D A IQ P + G+ + +PAF H S + Q G
Sbjct: 495 WSQLIRVKVGSFLLDCIMDVATVSRTIQDP--RTGEKFTEEQPAFSH-----SYEYQRG- 546
Query: 409 KRYGVIECDSLVQQGLEKS--ARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGA 466
++ GVI+ + V + K A + ++PMLV P W Y+ G YL+ S+ MR +
Sbjct: 547 RKLGVIKFNPAVADRMSKDPIADTLHPRHLPMLVKPKPWLSYNNGGYLYSRSWAMRFKDS 606
Query: 467 KQQRDAVKRAP-VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV----D 521
++Q ++ A +L VF L+ LGST W++N+RV V+ Q+W G A + D
Sbjct: 607 REQEIYLRHASEAGRLELVFAGLDVLGSTPWQINRRVFDVVLQVWNSGERFAKIPPAIPD 666
Query: 522 RKDVPLPEELDTEDEAEI----RKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDED 577
+ PE +DT+++A++ R+ +W + HS RC + K+ +AR D
Sbjct: 667 EPEPVRPENMDTDNKAKVVYLERQRQWM-----QNKAANHSDRCSVNYKVEIARAFLG-D 720
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
Y PHN+DFRGRAYP+ P+L+H+G DL RG+L F E +PLG GL WLKIHLANLY G
Sbjct: 721 TIYLPHNVDFRGRAYPIPPHLSHIGDDLSRGLLIFEEKKPLGTRGLRWLKIHLANLY--G 778
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
DK +D R+ + HL+DIFDSA+KPLEG+RWW +A+DP+QCLA C+ L ALRSP PE
Sbjct: 779 YDKASFDERVEYVHKHLEDIFDSADKPLEGRRWWTKADDPWQCLATCMELTSALRSPDPE 838
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
+PVHQDG+CNGLQHYAALG D GAA VNL D+P+DVY+ +A V + + D
Sbjct: 839 AYECGLPVHQDGTCNGLQHYAALGGDAQGAAQVNLAAADRPSDVYTYVANMVEKQIEEDI 898
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQ 817
+KD A+ L +V RK+VKQTVMT+VYGVTY+GARDQI+R+LK+R I +
Sbjct: 899 KKDDPI------AKLLEGKVSRKVVKQTVMTTVYGVTYVGARDQIERQLKDRGDIPAE-M 951
Query: 818 LFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ AS Y AK L ++ ++F+ A+ I WL CA++
Sbjct: 952 CWSASAYLAKNVLASIGDLFKGAKDIQNWLNLCARL 987
>J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_01835 PE=3 SV=1
Length = 1321
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/520 (41%), Positives = 327/520 (62%), Gaps = 35/520 (6%)
Query: 348 DDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPA--NQIGDGPPDIRPAFKHTLKNISTDS 404
+DW W Q +VKVGS L+ L+D A + + G+ + +PAF H+ + +
Sbjct: 531 EDWTTDWTQVVRVKVGSFLVDALMDVATVMRTGVDKRTGEAISEEQPAFFHSYEYLR--- 587
Query: 405 QNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
+ GVI+ + L+ + + K S R + P ++PMLV P W +D+G YL+ ++VMR
Sbjct: 588 ---GYKLGVIKLNPLISEKMAKESIRETLHPRHLPMLVKPKPWLSHDQGGYLYNKTWVMR 644
Query: 463 IHGAKQQRDAVKRAP-VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL-- 519
+++Q+ ++ A + L ++ +L+ LG+T W++N+R+ ++ ++W G +
Sbjct: 645 FKESQEQQSYLRHASSLGNLELIYASLDVLGNTPWKINRRIFDIVLEVWNSGTRWCKIPP 704
Query: 520 --VDRKDVPLPEELDTEDEAEI----RKWKWSVKNVRKENNERHSQRCDIELKLAVARKM 573
D + PE DT+ A++ R+ ++++ + NN HS RC + K+ +AR
Sbjct: 705 AAFDAPEPEKPENFDTDPRAKMIYLTRQKQYALG---RANN--HSDRCSVNYKIEIARAF 759
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
D Y+PHN+DFRGRAYP+ P+L+H+G DL RG+L FGE +PLG+ GL WLKIHLANL
Sbjct: 760 LG-DTIYFPHNVDFRGRAYPLPPHLSHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANL 818
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRS 693
Y G DK +D R++F +HLDDIFDSA+ PLEGK+WW +A+DP+QCLA CI L AL+S
Sbjct: 819 Y--GYDKANFDERVSFVHDHLDDIFDSADNPLEGKKWWTKADDPWQCLATCIELKAALQS 876
Query: 694 PTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIM 753
P P T +PVHQDG+CNGLQHYAALG D GA VNL D+P+DVY+ +A V + M
Sbjct: 877 PDPHTYECALPVHQDGTCNGLQHYAALGGDAQGARQVNLDVTDRPSDVYTFVAEMVEKAM 936
Query: 754 RRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIE 813
D + D K +A+ L ++ RK+VKQTVMT+VYGVT+IGAR+QI+++LK+R I
Sbjct: 937 EEDVKLDHK------YAKMLTGKISRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRGDIA 990
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ + + A+ Y AK L + ++F+ A+ I WL CA++
Sbjct: 991 AE-ECWLAASYVAKKVLLCIGDLFKGAKDIQTWLNSCARL 1029
>G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotorula glutinis
(strain ATCC 204091 / IIP 30 / MTCC 1151) GN=RTG_02653
PE=3 SV=1
Length = 1343
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/733 (34%), Positives = 394/733 (53%), Gaps = 81/733 (11%)
Query: 156 LKKRQIKMETEAWEDAAREY----QELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
L RQ +E ++ DAAR+ +E L + K + +++ + W + L +
Sbjct: 357 LSARQRLLEESSY-DAARQLYIHSREQLAQIGKDEGGLQSNWIQQIMFDWHKKLVKTL-- 413
Query: 212 EQELCKDTRLRLTHG-------PYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQG 264
+++ R + G P+ LP D +A+IT+ ++M + + T K +
Sbjct: 414 -EDIAAGKRKDIDSGFRDRELEPFLQLLPVDKLALITIVEVMRMCGSGTFAADGMKTTRV 472
Query: 265 ASQIGEAIE--HEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXX 322
+G A+E H A R TKK + E + P
Sbjct: 473 VLNVGRAVENEHHAEALRDSLSTKKLQEELAKVESRGTINP------------------- 513
Query: 323 XXXXXXXXXXXXQKNQQALGIV----------RGRDDWKP-WGQEAQVKVGSCLMQLLID 371
++ ++LGI+ G W P W Q + +VGS L+ L++
Sbjct: 514 ------DGTVTPRRQTESLGILWRRELAKREEDGDSTWHPNWTQTIRARVGSVLVSALME 567
Query: 372 TAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSAR 429
A ++ + G+ + +PAF H + + G+K G+I+ + V + L+K
Sbjct: 568 IAEVERTIKHPKTGEQVSEKQPAFSHAYQYM-----RGTK-LGIIKLNPAVSERLDKDPL 621
Query: 430 HMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ-LNPVFE 486
+ + ++PMLV P W ++ GAYL + +MR +++Q +++A L+ +F
Sbjct: 622 DITLHPRFLPMLVKPKPWLTWNSGAYLLHQTPMMRTKESEEQVQYLQQASDNHTLDIIFS 681
Query: 487 ALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL---VDRKDVP---LPEELDTEDEAEIR 540
L+TLG+ W++N++V + Q+W G AD+ + ++P +P+ + ++ A
Sbjct: 682 GLDTLGAVPWKINRKVFDTVVQVWNSGDAFADIPAAAQKLEIPTLEIPKGVMSDPRAR-D 740
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
++ V+ + ++ HS RCD+ KL +AR E FY+PHNLDFRGRAYP+ P L+H
Sbjct: 741 NYRRRVRELMQQKRAAHSMRCDLNYKLEIARAFLGET-FYFPHNLDFRGRAYPIPPNLSH 799
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
+G D+ RG+L F E +PLG+ GL WLKIH++NL G DK +D R AFT HL+D+FDS
Sbjct: 800 IGDDMSRGLLLFAESKPLGERGLRWLKIHVSNLM--GFDKASFDEREAFTMEHLEDVFDS 857
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A+ PLEG++WW +A+DP+QCLA CI L ALRS P +P+HQDG+CNGLQHYAAL
Sbjct: 858 ADNPLEGRKWWTKADDPWQCLATCIELTNALRSEDPTKYECGLPIHQDGTCNGLQHYAAL 917
Query: 721 GRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRK 780
G D GA VNL GD+PADVYSG+A V EI+ RD E A+ L ++ RK
Sbjct: 918 GGDINGARQVNLDIGDRPADVYSGVAQMVQEIITRDVEA------GVEEAKLLDGKITRK 971
Query: 781 LVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAA 840
+VKQTVMT+VYGVT+IGA++QI+R+LK+R + + +L+ S Y + L ++ ++F+ A
Sbjct: 972 VVKQTVMTTVYGVTFIGAKNQIERQLKDRGDVPAE-RLYKCSIYLGRLVLDSIGDLFKGA 1030
Query: 841 RSIMGWLGDCAKV 853
+I WL CA++
Sbjct: 1031 AAIQTWLNRCARL 1043
>F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococcus
anophagefferens GN=AURANDRAFT_20280 PE=3 SV=1
Length = 902
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 260/710 (36%), Positives = 371/710 (52%), Gaps = 78/710 (10%)
Query: 171 AAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTR----LRLTHG 226
A +Y+ ++ED+ L ++ L W+EPL I AE++ D LR+ +G
Sbjct: 88 ACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKATLDGDKGGDLRI-YG 146
Query: 227 PYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTK 286
P LP + +AV+TMH +GL + + G AK + +GE ++ EAR+ + +
Sbjct: 147 PLLLLLPPEQLAVLTMHTTIGLCLKH--GPLGAKYSNLVTTLGETVQAEARVLKLRNLRR 204
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
++ KA ++ EG+ V K N +A +
Sbjct: 205 ERLKAAEDAEGKR---AVPKTFLDARALARLPTHVV--------------NSRAKRALEE 247
Query: 347 RDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQN 406
DD W + K+GS L+ L+D A + G P +HT+ +
Sbjct: 248 GDD-TDWPTITRAKLGSALVMALLDVA-----KDDAGS------PLLEHTI------VYS 289
Query: 407 GSKRYGVIEC-DSLVQQG-LEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRI 463
+++ G+I D L+ ++ R +P ++PMLV P W YD+G +L L + MR
Sbjct: 290 NARKIGIIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRT 349
Query: 464 HGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRK 523
HG Q +A + A + V L+ +G W VN V ++ WA GG DL ++
Sbjct: 350 HGCALQMEAFRNARGIE-GGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQE 408
Query: 524 DVPLPEELDTED----------------EAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
D+ LPE +D + +A +R+ +++ N E HS RCD LKL
Sbjct: 409 DLALPEPMDLAEALARADGDEDGGKKLYDAHLRR----SARLKRRNAELHSLRCDTLLKL 464
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
++A + KDE FY+P+N+DFRGRAYP+ P LNHLGSD+CR +L F E + LG GL WL+
Sbjct: 465 SIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLR 524
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHLANL+ G+ K D R AF H DI D+ +P++G WWLEA++P+Q LAAC L
Sbjct: 525 IHLANLF--GLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACREL 582
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
A A P +PVH DGSCNGLQHYAALGRD G VNL+ G+ P DVY G+
Sbjct: 583 ARAAELDDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVNLLPGEAPRDVYEGVRA 642
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVD----RKLVKQTVMTSVYGVTYIGARDQIK 803
V E + R A D AL L VD RK+VKQTVMTSVYGVT++GAR QI
Sbjct: 643 LVAEKVARAATGD-----EALETVRLAQIVDGLITRKVVKQTVMTSVYGVTFVGARQQIL 697
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
RL + + D+A+L+ +CY A+ TL L+E+F +AR IMGWL CA++
Sbjct: 698 GRLTDAGDV-DEAELYLCACYVARLTLEVLEELFTSARHIMGWLAQCARL 746
>M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidioschyzon merolae
strain 10D GN=CYME_CMJ257C PE=3 SV=1
Length = 1252
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 259/721 (35%), Positives = 371/721 (51%), Gaps = 77/721 (10%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKD 218
R+ +E A E A Y+ + ++ +L + L L WF P+ AI EQE +
Sbjct: 420 REFNLEERAVEAAVARYRSFTQSALERGDINSLQPSQRLLLSWFFPVTMAIHQEQERIRR 479
Query: 219 TRLRL---THGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHE 275
L GP+ L +++AVI +H+ +G ++ + GV +V AS +G +++ E
Sbjct: 480 GELSYDGNVCGPHLLRLKPEVLAVIALHETLGRVLQDRAGVAFIRV---ASAVGRSVQAE 536
Query: 276 ARIYRFME--KTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXX 333
+ R E ++ + + LA G
Sbjct: 537 INLQRLRELHSEQRHRQLPQDRALRRTLALASTGSGGSRAVAAIN--------------- 581
Query: 334 XQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQ---PPANQIGDGPPDIR 390
L R D W +KVGS L+ ++ A I P Q
Sbjct: 582 -------LAAKRMELDTATWDDSVTIKVGSVLISFVMKHALIHIDTPTGKQAVQ------ 628
Query: 391 PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGL---EKSARHMVIP-YMPMLVPPNNWT 446
AF+H + + Q ++ GVIE V L E R ++P + PMLVPP WT
Sbjct: 629 -AFRHGYRPL----QREPRKVGVIELHKSVLNLLLANESDLRETILPRFQPMLVPPRPWT 683
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
Y+ G YL VMR+ G++ Q +A+K+ L+ VF LN LG+T WR+N+ VL V+
Sbjct: 684 AYNSGGYLRPRGLVMRVRGSRLQLEALKKG---DLSEVFAGLNALGATPWRINRPVLDVV 740
Query: 507 DQIWAKGGGLADLVDRKDVPLP-------------EELDTEDEAEIRKWKWSVKNVRKEN 553
+++W GG +A LV R D+ LP +E E+ R+ + ++ +RK N
Sbjct: 741 EKLWRAGGDIAGLVARADLQLPALAESVVDPAPDGKESAASTESLSREQRRAIWRIRKTN 800
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF- 612
ERH+ RC++ +L AR+ D FY PHNLDFRGRAYPM +L+H+ SD+CRG+L F
Sbjct: 801 RERHALRCELHYRLETAREFADVSRFYLPHNLDFRGRAYPMPSHLHHMSSDVCRGLLTFA 860
Query: 613 GEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGK--RW 670
G G +G+ GL W+K+HLANL G+DKL +D R+AF E+ + + A P W
Sbjct: 861 GPGLRVGERGLFWMKVHLANLC--GMDKLPFDERVAFAESVMPKVLAVAAAPTADSNLEW 918
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
W + EDPFQ LAAC LA A P+ S +P+ QDGSCNGLQHYAALGRD+ G V
Sbjct: 919 WAQQEDPFQLLAACFELAAAKGGLDPD-YHSTLPIQQDGSCNGLQHYAALGRDERGGYQV 977
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSV 790
NL+ ++P DVYSG+A V E + DA + A+ L ++ RK+VKQTVMTSV
Sbjct: 978 NLLPSERPQDVYSGVAELVRERVAHDAREGVPI------AQLLQGRISRKIVKQTVMTSV 1031
Query: 791 YGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
YGVT IGAR+QI+ RL+E ++ + + AS Y AK TL +L ++F A M WL +C
Sbjct: 1032 YGVTLIGAREQIQNRLRELPDFPEE-KTWEASFYLAKQTLGSLGDIFRGATDTMEWLAEC 1090
Query: 851 A 851
A
Sbjct: 1091 A 1091
>I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia sebi (strain
ATCC MYA-4683 / CBS 633.66) GN=WALSEDRAFT_49331 PE=3
SV=1
Length = 1136
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/729 (34%), Positives = 391/729 (53%), Gaps = 55/729 (7%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNL---PYMKSLFLGWFE-------PLRNA 208
RQ +E A+E A ++ + ++ K ++ L P K ++ W + L+ +
Sbjct: 145 RQRLLEESAYETAKARFEHEMNELEKAGVSTALSGHPLQKLMWDWWKKVSVDIQAKLQKS 204
Query: 209 IVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQ 267
+ K+ + P+ + L ++ M++IT+ +++ L + T G+ K +
Sbjct: 205 METTNPKTKEEKFMNEITPFLSLLSSEKMSLITVLEILRL--SGTGGIAEGMKTTRALLS 262
Query: 268 IGEAIE--HEARIYRF------------MEKTKKKTKATDNCEGESDLAPVKKGXXXXXX 313
+G+A+E H A I + ++ K+K + D+ + E +L K
Sbjct: 263 VGKAVENEHHAEILKQKHGISLKGVEADAKQVKRKLRYFDHRKAEKELD--LKSPEFTGL 320
Query: 314 XXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKP-WGQEAQVKVGSCLMQLLIDT 372
++ + + R W P W Q ++KVGS L+ L++
Sbjct: 321 IDDAMGTSEQSPEAHSHDIASERAKARVVEERMNKAWTPNWSQIIRIKVGSFLVDSLMEC 380
Query: 373 AYIQPPAN--QIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARH 430
A I A + G+ + +PAF + + + K+ GVI+ ++ V L+K
Sbjct: 381 ATITRTAKHPESGEEMTEAQPAFSQSYQYVR------GKKLGVIKVNTAVADRLDKDPLG 434
Query: 431 MVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEA 487
I ++PMLV P W YD G YLF + MR + +Q+ + +A + PV
Sbjct: 435 STIHPRHLPMLVKPKPWLRYDSGGYLFHKNSAMRFKDSNEQQSYILKASSEGTMEPVLAG 494
Query: 488 LNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL---VDRKDVPLPEELDTEDEAEIRKWKW 544
L+ LG+T W +N++V +V+ + W G GLA + + P+ D E +
Sbjct: 495 LDVLGATPWNINRKVFNVVKEAWNTGEGLAKIPPATTKTPDPVKPANYAIDPKERSNYLQ 554
Query: 545 SVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSD 604
S+K V E HS RCD KL +AR +E FY+PH LDFRGRAYP+ P+LNH+G D
Sbjct: 555 SMKAVVNERRNNHSIRCDTNYKLEIARAFLNE-TFYFPHTLDFRGRAYPIPPHLNHIGDD 613
Query: 605 LCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKP 664
L RG+L F E RPLG+ G+ WLKIHLAN+Y G DK ++ R F + H+++I+DSA+ P
Sbjct: 614 LSRGLLIFAEKRPLGEKGMRWLKIHLANVY--GYDKASFNEREQFADEHMEEIYDSADNP 671
Query: 665 LEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDK 724
L G++WWL+A+DP+QCLAAC + A+ SP P S +PVHQDG+CNGLQHYAALG D
Sbjct: 672 LNGRKWWLKADDPWQCLAACYEIQAAMLSPNPLAYESALPVHQDGTCNGLQHYAALGGDP 731
Query: 725 LGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA-EKDPKTNPNALHARNLINQVDRKLVK 783
+GA VNL GD+P+DVY+ +A V+E +++DA E D + A+ L ++ RK+VK
Sbjct: 732 MGAKQVNLEQGDRPSDVYTAVADLVIEDIKKDALESDNE------FAKILEGKITRKVVK 785
Query: 784 QTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSI 843
QTVMT+VYGVT+IGARDQI ++L++R I D +++ + Y AK L ++ ++F A +I
Sbjct: 786 QTVMTTVYGVTFIGARDQIDKQLQDRGDIPQD-KVYTTASYLAKKVLRSIGDLFAGANAI 844
Query: 844 MGWLGDCAK 852
WL A+
Sbjct: 845 QKWLSMSAR 853
>D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_60184 PE=3 SV=1
Length = 1086
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/638 (37%), Positives = 356/638 (55%), Gaps = 54/638 (8%)
Query: 226 GPYFNELPADMMAVITMHKLMGLLMTN--TNGVGSAKVVQGASQIGEAIEHEARIYRFME 283
PY + A+ ++++T+ +LM L T T+G+ +A+ V +G+A+E E + +
Sbjct: 167 SPYLALVNAERLSLLTIMELMTLHDTGGVTDGMKTARAVIA---VGKAVEAEYK----AQ 219
Query: 284 KTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGI 343
K+ A + SD++ ++ A +
Sbjct: 220 MCKRNHIAVPSSTRSSDVSVFSN---------------------LGYSNLQERRVAAARL 258
Query: 344 VRGRDDWK-PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP--PDIRPAFKHTLKNI 400
+ + W PW + +VG L+ L+DTA +Q A DG + +PAF H+ + +
Sbjct: 259 MEDGEAWTAPWSVHTRARVGGVLIDCLMDTAKVQRTAVDKNDGKILTEEQPAFYHSYEYV 318
Query: 401 STDSQNGSKRYGVIECDSLVQQGLEKS-ARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPS 458
+R GVI+ + V + V P ++PMLV P W Y+ G YL+ +
Sbjct: 319 Q------GQRLGVIKLNQEVAAHMANEWTIDTVHPRHLPMLVKPKPWLNYNDGGYLYHKT 372
Query: 459 YVMRIHGAKQQRDAVKRAP-VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
Y MR G+++Q+ +K A Q V+ L+ LGST W++N+++ V+ ++W +G
Sbjct: 373 YAMRFKGSREQQAYLKHASDAGQCELVYAGLDVLGSTPWKINRKIFDVVLEVWNRGDRWG 432
Query: 518 DLVDRK-DVPLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
L D P PE L + ++ R W ++K + HS RC + K+ +AR
Sbjct: 433 KLPPATFDEPEPEALSPDADSRKRADWSHAMKLYNQAKQSNHSHRCSVNYKIEIARTFLG 492
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
E FY PHNLDFRGRAYP+ P+LNH+G DL RG+L F E +PLG+ G WLKIH+ANLY
Sbjct: 493 E-TFYQPHNLDFRGRAYPVPPHLNHIGDDLSRGLLMFAEKKPLGERGFRWLKIHIANLY- 550
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK +D R+ + E+ L D++DSAN P+ GKRWWLEA+DP+QCLAA + L +A+ S
Sbjct: 551 -GFDKASFDERVQWVEDRLADVYDSANNPINGKRWWLEADDPWQCLAASMELRDAIESGN 609
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P S +PVHQDG+CNGLQHYAALG D GAA VNL D+P+DVY+ + V IM
Sbjct: 610 PLAFESSLPVHQDGTCNGLQHYAALGGDPEGAAQVNLQKADRPSDVYTYVGRMVERIMEE 669
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
D + K +P A+ L ++ RK+VKQTVMT+VYGVT+IGARDQI+R+L++R I +
Sbjct: 670 D---EKKGDPMAIL---LKGKISRKVVKQTVMTTVYGVTFIGARDQIERQLRDRKDIPPE 723
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+GA+ Y A+ L + ++F A+ IM WL CA++
Sbjct: 724 -HCWGAATYLARKVLACIGDLFYGAKHIMTWLNLCARL 760
>N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeria graminis f. sp.
hordei DH14 GN=BGHDH14_bgh06417 PE=4 SV=1
Length = 1434
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/644 (37%), Positives = 351/644 (54%), Gaps = 53/644 (8%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRF 281
R +GP LPA +A IT+ M L+ +T+ V +IG+ IE E+ +Y
Sbjct: 429 RCMYGPLLRILPASQLAAITIIACMTLMGQHTDKRTPLSTV--VLEIGKNIEDESTMYLL 486
Query: 282 MEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQAL 341
+ K+ T E + L P + +
Sbjct: 487 QKAQKENMWPT---ELKRRLNP-------------------EFYVKLKRSRGAGAAAKHM 524
Query: 342 GIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKN 399
+ KPW + KVG+ LM L++ A + + + ++ AF H
Sbjct: 525 NRYFAEEGAKPWPLPLKAKVGAVLMSHLMEVAKVSARVKHPETNEELVQVQSAFTH---- 580
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSY 459
+ + G K VI L++Q + ++ ++PM+V P++W G++KG Y+ P+
Sbjct: 581 -AHQYKKGKKTGIVIMNKVLIEQLQREPVHSLLAKHLPMVVEPDDWRGFEKGGYIVYPAR 639
Query: 460 VMRIHGAKQQRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
+MRI +++ A ++Q ++ V + LN LG T WR+N++V ++ Q W G +A
Sbjct: 640 IMRIKQGDEEQRHYCEAAISQGEMSKVVQGLNVLGKTSWRINQQVFDIMLQAWNTGEAIA 699
Query: 518 D---LVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMK 574
+ L + DVP PE + T D E +W VK + HSQRC +L +A+ +K
Sbjct: 700 NFPPLNPKIDVP-PEPVSTTDPLERGRWIRKVKIAQNIKTGMHSQRCFQNFQLEIAQALK 758
Query: 575 DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLY 634
D++ FY+PHN+DFRGRAYP+ PYLNH+G+D CRG+L FG G+ LG+SGL WLKIH++N+Y
Sbjct: 759 DKE-FYFPHNVDFRGRAYPLPPYLNHIGADHCRGLLIFGRGKQLGESGLKWLKIHISNVY 817
Query: 635 AGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSP 694
G DK R +FT + L++I+DSA P+ GK+WWLEAEDP+QCLAACI L AL SP
Sbjct: 818 --GYDKASLQDRESFTSSKLEEIYDSALNPMNGKKWWLEAEDPWQCLAACIELKNALESP 875
Query: 695 TPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMR 754
P +SH+PVHQDG+CNGLQHYAALG D GA VNL G++PADVYS +A +++R
Sbjct: 876 DPTKFVSHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGEKPADVYSAVA----DLVR 931
Query: 755 RDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI-- 812
D KD K N L A L ++ RK VKQTVMT+VYGVT+IGA Q++++L
Sbjct: 932 IDIAKD-KEAGNPL-AAALEGKITRKTVKQTVMTNVYGVTFIGASAQVRKQLAASQTTPS 989
Query: 813 ----EDDAQ-LFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
E ++Q + Y A+ TAL MF A I WL +CA
Sbjct: 990 IDQPESESQNRHNDAAYVARKIFTALSTMFRGAHDIQYWLAECA 1033
>M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosporidium toruloides
NP11 GN=RHTO_03678 PE=4 SV=1
Length = 1343
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/733 (33%), Positives = 397/733 (54%), Gaps = 81/733 (11%)
Query: 156 LKKRQIKMETEAWEDAAREY----QELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
L RQ +E ++ DAAR+ +E L + K + + +++ + W + L +
Sbjct: 357 LSTRQRLLEESSY-DAARQLYIHSREQLAQIGKDEGSLQSNWIQQIMFDWHKKLVKTL-- 413
Query: 212 EQELCKDTRLRLTHG-------PYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQG 264
+++ R + G P+ + LP D +A+IT+ ++M + + K +
Sbjct: 414 -EDIAAGKRKDIDSGFRDQELEPFLHLLPIDKLALITIVEVMRMCGSGNFAADGMKTTRV 472
Query: 265 ASQIGEAIE--HEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXX 322
+G A+E H A R TKK + E + P
Sbjct: 473 VLNVGRAVENEHHAESLRGSLSTKKLQEELAKIESRGTVNP------------------- 513
Query: 323 XXXXXXXXXXXXQKNQQALGIV----------RGRDDWKP-WGQEAQVKVGSCLMQLLID 371
++ ++LGI+ G W P W Q + +VGS L+ L++
Sbjct: 514 ------DGTVTPRRQTESLGILWRRELAKREEDGDSTWHPNWTQTIRARVGSVLVSALME 567
Query: 372 TAYIQPPAN--QIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSAR 429
A ++ + G+ + +PAF H + + G+K G+I+ + V + L+K
Sbjct: 568 IAEVERTIKHPKTGEQVTEKQPAFSHAYQYM-----RGTK-LGIIKLNPAVSERLDKDPL 621
Query: 430 HMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ-LNPVFE 486
+ + ++PMLV P W ++ GAYL + +MR +++Q +++A L+ +F
Sbjct: 622 DITLHPRFLPMLVKPKPWLTWNSGAYLIHQTPMMRTKESEEQVQYLQQASDNHTLDIIFS 681
Query: 487 ALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL---VDRKDVP---LPEELDTEDEAEIR 540
L+TLG+ W++N++V ++ ++W G AD+ + ++P +P+ + ++ A
Sbjct: 682 GLDTLGAVPWKINRKVFDIVVKVWNSGDAFADIPAAAQKLEIPTLEIPKGVMSDPRAR-D 740
Query: 541 KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 600
++ V+ + ++ HS RCD+ KL +AR E FY+PHNLDFRGRAYP+ P L+H
Sbjct: 741 NYRRRVRELMQQKRAAHSMRCDLNYKLEIARAFLGET-FYFPHNLDFRGRAYPIPPNLSH 799
Query: 601 LGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDS 660
+G D+ RG+L F E +PLG+ GL WLKIH++NL G DK +D R AFT HL+D+FDS
Sbjct: 800 IGDDMSRGLLLFAESKPLGERGLRWLKIHVSNLM--GFDKASFDEREAFTMEHLEDVFDS 857
Query: 661 ANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAAL 720
A+ PLEG++WW +A+DP+QCLA CI + ALRS P +PVHQDG+CNGLQHYAAL
Sbjct: 858 ADNPLEGRKWWTKADDPWQCLATCIEVTNALRSEDPTKYECGLPVHQDGTCNGLQHYAAL 917
Query: 721 GRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRK 780
G D GA VNL GD+PADVYSG+A V EI+ RD E + A+ L ++ RK
Sbjct: 918 GGDINGARQVNLDIGDRPADVYSGVAQMVQEIITRDMEAGIE------EAKLLDGKITRK 971
Query: 781 LVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAA 840
+VKQTVMT+VYGVT+IGA++QI+R+LK+R + + +L+ S Y + L ++ ++F+ A
Sbjct: 972 VVKQTVMTTVYGVTFIGAKNQIERQLKDRGDVPPE-RLYRCSIYLGRLVLDSIGDLFKGA 1030
Query: 841 RSIMGWLGDCAKV 853
+I WL CA++
Sbjct: 1031 AAIQTWLNRCARL 1043
>M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed RNA polymerase
RPO41 OS=Pseudozyma antarctica T-34 GN=PANT_12c00137 PE=4
SV=1
Length = 1509
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 246/637 (38%), Positives = 361/637 (56%), Gaps = 51/637 (8%)
Query: 227 PYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKT 285
P+ LP +A+IT+ +LM M+ GV K + Q+G AIE E E
Sbjct: 594 PFLRLLPVSKLALITVLELM--RMSGNGGVSDGMKTTRALLQVGRAIETEYH----SEVI 647
Query: 286 KKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVR 345
+K K N + K+G QK Q+ G++
Sbjct: 648 RKNPKIFQNAQAAQAALK-KRGLVDFAARREIKEW--------------QKQQEEQGVI- 691
Query: 346 GRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNISTDS 404
W Q + +VGS L+Q L+ A + A ++ G + +PAF T + +
Sbjct: 692 --SSIPKWTQITRARVGSYLVQHLMQVATVNRKATDRDGILWEEDQPAFYSTYQYL---- 745
Query: 405 QNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
G K+ GVI+ + +V + L+K S + P ++PMLVPP WT +D G Y + MR
Sbjct: 746 --GGKKLGVIKLNEVVAKRLDKDSISETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMR 803
Query: 463 IHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD 521
+ +Q ++ A L+ V AL+ LG+T W++NK + V+ ++W G +AD+
Sbjct: 804 FKDSAEQGSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNSGKDIADMPP 863
Query: 522 RK-DVPLPEELDTEDEAEIRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDED 577
+ + P P + D D +I+ ++ +++ N +R HSQRCD+ KL +AR E
Sbjct: 864 MEMETPEPVKPDNYDH-DIKARSVYLQRLKQWNQQRSSNHSQRCDVNYKLEIARAYLGER 922
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L F + +PLGK+GL WL+IH++N++ G
Sbjct: 923 -FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLMFADSKPLGKAGLRWLRIHISNVF--G 979
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT-P 696
DK + R F +H DI DS +PL+G RWWL+A+DP+QCLAAC+ L AL P P
Sbjct: 980 YDKASFGEREQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLAACMELRAALDHPEGP 1039
Query: 697 ETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRD 756
E S +PVHQDG+CNGLQHYAALG D GA VNL GGD+PADVYSG+A V++++ +
Sbjct: 1040 EAYESCLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSGGDRPADVYSGVADLVIKVLDEE 1099
Query: 757 AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDA 816
A K +T A+ L +V RK+VKQTVMT+VYGVT+IGA++Q+ R+L +R + +
Sbjct: 1100 AAKGDRT------AKILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE- 1152
Query: 817 QLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
LF A+ + AK ++ + +F A+ I WL AKV
Sbjct: 1153 DLFNAASFLAKVIMSCIGNLFSGAQKIQDWLSFSAKV 1189
>M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna polymerase
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_4440
PE=4 SV=1
Length = 1399
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/649 (36%), Positives = 351/649 (54%), Gaps = 59/649 (9%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQ-GASQIGEAIEHEARIYR 280
R +GP+ LPA+ +A +T+ M L +++G+ + QI +++E E+ I+
Sbjct: 434 RCEYGPFLRYLPAEKLAALTIIAHMHAL--SSSGIDKGLTLSFSILQIAKSVEDES-IFE 490
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+++ K +D+ + K + ++ +
Sbjct: 491 TIQQNMAKPSWSDSVADRVRTLRILKAKAHGNSELTDNTNSTSFSPDAFVSSQIRAHEWS 550
Query: 341 LGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTA-----YIQPPANQIGDGPPDIRPAFKH 395
+GI + KVGS L++ L+ A + P N+ ++PAF H
Sbjct: 551 VGI--------------KAKVGSFLLESLLKVAKVPVTMVHPETNETVT---QMQPAFSH 593
Query: 396 TLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARH-MVIPYMPMLVPPNNWTGYDKGAYL 454
++ GVI + ++ + L++ H ++ ++PMLV P WTG+ G +L
Sbjct: 594 A------QQYRMGRKLGVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFL 647
Query: 455 FLPSYVMRI-HGAKQQRD----AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
P VMR+ +G QR+ A+ R L+ VF+ LN LG WR+N+ V ++ +
Sbjct: 648 KHPGRVMRVKNGDADQRNYADAAIDRG---NLSTVFKGLNILGEQSWRINQPVFDIMLEA 704
Query: 510 WAKGGGLADLVDRK---DVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
W G +A+L K D P PE + D E R+W +VK V + HSQRC +
Sbjct: 705 WNSGDAIANLAPDKPKLDYP-PEPETSSDPLERRRWVTAVKKVENSKSSFHSQRCFQNFQ 763
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L +AR ++D+ FY+PHN+DFRGRAYP+ PYLNH+G+D CRG++ FG G+ LG SGL WL
Sbjct: 764 LEIARALRDKT-FYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRWL 822
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
K+HLAN+Y G DK R F ++D+I+DSA PL GKRWWL+AEDP+QCLAAC+
Sbjct: 823 KVHLANVY--GFDKASLQEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACME 880
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
AL S P + +S++PVHQDG+CNGLQHYAALG D GA VNL GD+PADVY+ +A
Sbjct: 881 FKNALESGDPASFVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVA 940
Query: 747 TRVLEIMRRD-AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 805
V E + +D PK A+ L ++ RK+VKQTVMT+VYGVT+IGA+ Q++++
Sbjct: 941 DLVKESIAKDLLAGQPK-------AKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQ 993
Query: 806 L---KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
L + D+ + Y TAL MF+ A I WLGDCA
Sbjct: 994 LVAAHKDLPDNDEINPGTLASYVVTKIFTALSTMFKGAHDIQYWLGDCA 1042
>G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryotinia fuckeliana
(strain T4) GN=BofuT4P0000045001 PE=3 SV=1
Length = 1399
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/649 (36%), Positives = 351/649 (54%), Gaps = 59/649 (9%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQ-GASQIGEAIEHEARIYR 280
R +GP+ LPA+ +A +T+ M L +++G+ + QI +++E E+ I+
Sbjct: 434 RCEYGPFLRYLPAEKLAALTIIAHMHAL--SSSGIDKGLTLSFSILQIAKSVEDES-IFE 490
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+++ K +D+ + K + ++ +
Sbjct: 491 TIQQNMAKPSWSDSVADRVRTLRILKAKAHGNSELTDNTNSTSFSPDAFVSSQIRAHEWS 550
Query: 341 LGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTA-----YIQPPANQIGDGPPDIRPAFKH 395
+GI + KVGS L++ L+ A + P N+ ++PAF H
Sbjct: 551 VGI--------------KAKVGSFLLESLLKVAKVPVTMVHPETNETVT---QMQPAFSH 593
Query: 396 TLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARH-MVIPYMPMLVPPNNWTGYDKGAYL 454
++ GVI + ++ + L++ H ++ ++PMLV P WTG+ G +L
Sbjct: 594 A------QQYRMGRKLGVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFL 647
Query: 455 FLPSYVMRI-HGAKQQRD----AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
P VMR+ +G QR+ A+ R L+ VF+ LN LG WR+N+ V ++ +
Sbjct: 648 KHPGRVMRVKNGDADQRNYADAAIDRG---NLSTVFKGLNILGEQSWRINQPVFDIMLEA 704
Query: 510 WAKGGGLADLVDRK---DVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
W G +A+L K D P PE + D E R+W +VK V + HSQRC +
Sbjct: 705 WNSGDAIANLAPDKPKLDYP-PEPETSSDPLERRRWVTAVKKVENSKSSFHSQRCFQNFQ 763
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L +AR ++D+ FY+PHN+DFRGRAYP+ PYLNH+G+D CRG++ FG G+ LG SGL WL
Sbjct: 764 LEIARALRDKT-FYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRWL 822
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
K+HLAN+Y G DK R F ++D+I+DSA PL GKRWWL+AEDP+QCLAAC+
Sbjct: 823 KVHLANVY--GFDKASLQEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACME 880
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
AL S P + +S++PVHQDG+CNGLQHYAALG D GA VNL GD+PADVY+ +A
Sbjct: 881 FKNALESGDPASFVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVA 940
Query: 747 TRVLEIMRRD-AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 805
V E + +D PK A+ L ++ RK+VKQTVMT+VYGVT+IGA+ Q++++
Sbjct: 941 DLVKESIAKDLLAGQPK-------AKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQ 993
Query: 806 L---KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
L + D+ + Y TAL MF+ A I WLGDCA
Sbjct: 994 LVAAHKDLPDNDEINPGTLASYVVTKIFTALSTMFKGAHDIQYWLGDCA 1042
>A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_08623 PE=3 SV=1
Length = 1392
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 242/645 (37%), Positives = 349/645 (54%), Gaps = 50/645 (7%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS-QIGEAIEHEARIYR 280
R +GP+ LPA+ ++ +T+ M L +++G+ + A QI +++E E+ I+
Sbjct: 435 RCEYGPFLRYLPAEKLSALTIISHMHAL--SSSGIDKGLTLSFAILQIAKSVEDES-IFE 491
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+++ K K D+ + + + K +
Sbjct: 492 SIQQNKAKPLFRDSPADRARMLRILKSRARGASGESIDENHSTNH---------SSEEFV 542
Query: 341 LGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYI-----QPPANQIGDGPPDIRPAFKH 395
L +R R+ W + KVGS L++ L+ A + P N+ ++PAF H
Sbjct: 543 LSQIRSRE----WSIGIRAKVGSFLLESLLKVAKVPVTLKHPETNETVT---QMQPAFSH 595
Query: 396 TLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARH-MVIPYMPMLVPPNNWTGYDKGAYL 454
K+ GVI + ++ + L++ H ++ ++PMLV P WTG+ G +L
Sbjct: 596 G------QQYRLGKKLGVINANKVIVELLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFL 649
Query: 455 FLPSYVMRIHGAKQQRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAK 512
P VMR+ Q + A + Q L VF LN LG W++N+ V V+ W
Sbjct: 650 RHPGKVMRVKNGDQDQRNYADAAIDQGNLTTVFRGLNILGEQSWKINQPVFDVMLDAWNS 709
Query: 513 GGGLADLV-DRKDVPLPEELDTE-DEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
G +A+L D+ + P E +T D E R+W +VK V HSQRC +L +A
Sbjct: 710 GDAIANLAPDKPRLEYPPEPETSSDPLERRRWVTAVKKVENAKAGFHSQRCFQNFQLEIA 769
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
R ++D+ FY+PHN+DFRGRAYP+ PYLNH+G+D CRG++ FG G+ LG SGL WLK+HL
Sbjct: 770 RALRDKT-FYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMIFGVGKKLGTSGLKWLKVHL 828
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
AN+Y G DK R F H+D+I+DSA PL G RWWL+AEDP+QCLAAC+ L A
Sbjct: 829 ANVY--GFDKASLSEREEFASKHIDEIYDSATNPLGGDRWWLQAEDPWQCLAACMELKNA 886
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
L S P + +S++PVHQDG+CNGLQHYAALG D GA VNL GD+PADVY+ +A V
Sbjct: 887 LESGDPASFVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVADLVK 946
Query: 751 EIMRRD-AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL--K 807
E +++D E K A+ L ++ RK+VKQTVMT+VYGVT+IGA+ Q++++L
Sbjct: 947 ESIKKDLLEGHSK-------AKILDGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAA 999
Query: 808 ERCAIEDDAQLFGA-SCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
R +D G + Y TAL MF A I WLGDCA
Sbjct: 1000 HRDLPDDTEDNPGTLASYVVTKIFTALSTMFRGAHDIQYWLGDCA 1044
>F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyostelium purpureum
GN=DICPUDRAFT_95344 PE=3 SV=1
Length = 862
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/424 (49%), Positives = 281/424 (66%), Gaps = 22/424 (5%)
Query: 437 PMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKW 496
PM++ P W +G YL ++R +G K Q ++ ++ ++Q ++ ALN LG+T W
Sbjct: 294 PMVIKPLPWISPFEGPYLHYKVPILRANGNKSQITSLLKSDLSQ---IYRALNVLGNTPW 350
Query: 497 RVNKRVLSVIDQIWAKGGGLADL---VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKEN 553
+NK+ +I++ W GG +AD+ ++ + PLPE++ T + + + K + K N
Sbjct: 351 VINKKAYDIINEAWEAGGDIADMPRKINYEYPPLPEDVLTSLSSRKKHFLLE-KKISKLN 409
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
+ HS R D + KL VA K D Y+PHNLDFRGR+YP+ P+LNHLGSDLCR +L+F
Sbjct: 410 KDLHSLRSDCKYKLEVAEKFLDH-TIYFPHNLDFRGRSYPIPPHLNHLGSDLCRSLLKFE 468
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
+ +PLGK GL WLKI ++NLY GVDK+ + RI FT ++++I DSA+ PL+GKRWWL
Sbjct: 469 KSKPLGKRGLDWLKIQISNLY--GVDKVSHADRIKFTTENIENIMDSADNPLKGKRWWLN 526
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
A+ P+Q LAACI L EALRSP PE S++P+HQDG+CNGLQHYAALG D+LGA VNLI
Sbjct: 527 ADYPWQALAACIELTEALRSPNPEEFCSNLPIHQDGTCNGLQHYAALGGDELGAIKVNLI 586
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
D+P DVY+G+A V EI+ ++AE+ N A+ R ++DRKLVKQTVMTSVYGV
Sbjct: 587 PSDKPQDVYTGVAGLVAEIVEKEAEEG---NKFAIFFR---GRIDRKLVKQTVMTSVYGV 640
Query: 794 TYIGARDQIKRRLKERCAIE------DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWL 847
TYIGAR+QI LKE+ E DD +F AS Y K T AL MF ARSIM WL
Sbjct: 641 TYIGAREQIHSSLKEKLDEETNPLEIDDEFMFSASSYITKHTFRALNNMFFGARSIMAWL 700
Query: 848 GDCA 851
+CA
Sbjct: 701 SECA 704
>L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizoctonia solani AG-1 IA
GN=AG1IA_03910 PE=3 SV=1
Length = 1371
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/510 (43%), Positives = 325/510 (63%), Gaps = 30/510 (5%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPP-ANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
W Q +V+VGS L+ ++++AYI+ N+ G+ + +PAF H+ + + K+
Sbjct: 567 WTQVVRVRVGSFLVDSVMNSAYIKRNGTNESGENLCEEQPAFMHSYEYVR------GKKL 620
Query: 412 GVIECDSLVQQGLEKSA-RHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQ 469
GVI+ + +V + + + R + P ++PMLV P W YDKG YL LP+ VMRI + +Q
Sbjct: 621 GVIKLNPVVGEKMARDPIRETLHPRHLPMLVKPQPWEDYDKGGYLKLPT-VMRIKDSPEQ 679
Query: 470 RDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL----VDRKD 524
+K A ++ V+E L+ LG T WR+N ++L+V+ Q+W +G G+A + +D ++
Sbjct: 680 LSYLKHASAAGHVDFVYECLDALGETPWRINDKILNVVLQVWNEGKGMAGIPPIQLDIEE 739
Query: 525 VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
P PEE D A + +K++ + H +RC++ KL VAR + DE FY PHN
Sbjct: 740 PPKPEEDDPRARA---TYLLKLKSILTDKRNNHGERCNVNYKLEVARFVNDE--FYMPHN 794
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
LDFRGRAYP+ P+LNH+G DLCRG+L F E RPLG+ GL WLKIHLAN++ G DK +D
Sbjct: 795 LDFRGRAYPIPPHLNHIGDDLCRGLLLFAERRPLGERGLRWLKIHLANVF--GYDKASFD 852
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R+ F E HL++I DSA PL GK+WWL+A+DP+QCL+ C+ L EAL+ P PE S++P
Sbjct: 853 ERVLFVEKHLEEIRDSAENPLNGKQWWLKADDPWQCLSTCMELTEALKGPVPELYRSNLP 912
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDG+CNGLQHYAALG D GA VNL GD+PADVYS +A V ++ DA
Sbjct: 913 VHQDGTCNGLQHYAALGGDAAGAQHVNLEQGDRPADVYSHVARMVDVVVDEDAAL----- 967
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCY 824
A+ + ++ RK+VKQTVMT+VYGVT+IGARDQI+++L++ + + + + + Y
Sbjct: 968 -GIPEAKVVQGKIARKVVKQTVMTTVYGVTFIGARDQIEKQLRDIVGLSRE-ESWPVAAY 1025
Query: 825 AAKT-TLTALQEMFEAARSIMGWLGDCAKV 853
AKT L A+ ++F A I WL A++
Sbjct: 1026 LAKTQVLGAIGDLFSGASQIQNWLSISARL 1055
>Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoeba vermiformis
GN=mtRNAP PE=3 SV=1
Length = 992
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 258/742 (34%), Positives = 379/742 (51%), Gaps = 75/742 (10%)
Query: 147 GMTSYKYKMLKKRQIK----METEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWF 202
G Y +K L + QIK +E EA E A++++EL++D+ K L L WF
Sbjct: 134 GEDYYSHKSLSEEQIKEQLYLEMEAVEREAKKFKELVDDVLKLNRGACLDPGTEFLLQWF 193
Query: 203 EPLRNAIVAEQELC---------------------KDTRLRLTHGPYFNELPADMMAVIT 241
+PL + E++L + L H + NE+ +D +AVI
Sbjct: 194 QPLVKLLDLEKQLSLADPGVHQELRASVEALGVLYNEQYLHEYHA-HTNEVASDKLAVIV 252
Query: 242 MHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEAR---IYRFMEKTKKKTKATDNCEGE 298
+H+L+G VVQ QI EA++ E + +E + D+ E
Sbjct: 253 IHELIGAAAGLKEQSPVRSVVQ---QISEAVQGEVNWQDLKDELENPAESRATPDSAENP 309
Query: 299 SDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQ 358
S P KK + N++AL ++ W +E
Sbjct: 310 SGTVPAKK-----------------KKRVVNFTSVNRLNRRALKVLGSEALWSRGLKEF- 351
Query: 359 VKVGSCLMQLLIDTAYI--QPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIEC 416
+G+ L+ LL+ A + + P I P + + + DS + R V
Sbjct: 352 --MGARLLALLLSVAQLREEDPVTGIFHARPAFEVSHRTQHRKEGMDSTHNPSRLSVSAS 409
Query: 417 DSLVQQGLEKSARHMV--IPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVK 474
++ V+ + H I PM +PP W D+G YL + + R ++Q +
Sbjct: 410 EA-VRARFDAMMTHFFHFIRQYPMQIPPRPWDSPDRGGYLAVQVPIFRYQSYEEQFRPLF 468
Query: 475 RAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTE 534
R L ++E LN LG T WR+ +RV V+ + W +GG LAD+ DR+D P P
Sbjct: 469 RKS-DDLAVIYEGLNALGETPWRIYQRVYHVVKRAWEQGGDLADIPDRRDKPYPMPTALG 527
Query: 535 DEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPM 594
++ +W +K + + N + S R D LK+ VA K D+ Y+PHN+DFRGR YP+
Sbjct: 528 KDS---RWYRQLKKIDQLNYDLVSLRADFLLKMEVAEKFMDK-TLYFPHNMDFRGRVYPV 583
Query: 595 HPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHL 654
P+LNH+GSD+ RG+L F +G+PLG+ GLHWL+I LANLY G DK+ + R+ F +
Sbjct: 584 PPHLNHMGSDMSRGLLWFADGKPLGERGLHWLRIQLANLY--GFDKVPFSDRLDFVSKNQ 641
Query: 655 DDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGL 714
D I+ A +PLE RWW+ A+ P+Q LAAC A+ S P + +SH+P+ QDG+CNGL
Sbjct: 642 DKIYSCAQRPLED-RWWVAADSPWQFLAACFEYYNAMHSADPHSYVSHLPIQQDGTCNGL 700
Query: 715 QHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLI 774
QHYAALG D+ GA +VNL+ D+P DVYS +A V + + RDAE N + L
Sbjct: 701 QHYAALGGDEQGAKSVNLLPSDRPQDVYSDVAELVAQRIHRDAE-------NGVAVAQLS 753
Query: 775 N-QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIED--DAQLFGASCYAAKTTLT 831
+VDRK+VKQTVMTSVYGVT+IGAR QI +K+ + D +++ AS Y A+ T
Sbjct: 754 KGRVDRKVVKQTVMTSVYGVTFIGARQQITNAMKDHRLLTHLTDNEMYQASQYIAQLTFE 813
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
+L+EMF AR+IM WL CAK+
Sbjct: 814 SLKEMFTGARNIMDWLATCAKL 835
>K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_261459 PE=3 SV=1
Length = 1324
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/509 (42%), Positives = 315/509 (61%), Gaps = 25/509 (4%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
W Q +V+VGS L+ L+D A + A ++ G+ + +PAF H+ + + ++
Sbjct: 552 WTQTIRVRVGSFLVDALMDVATVSRTAIDKHGELHTEEQPAFYHSYEYLR------GQKL 605
Query: 412 GVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQ 469
GVI+ + +V L K R + P ++PMLV P W +D+G YL+ + VMR +++Q
Sbjct: 606 GVIKLNPVVADRLAKDQVRETLHPRHLPMLVRPKPWLSHDQGGYLYNKTSVMRYKDSREQ 665
Query: 470 RDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLAD----LVDRKD 524
+ V+ A L V+ +L+ LG T W++N+ + V+ ++W G L + D+ +
Sbjct: 666 QSYVREASSQGALELVYASLDVLGGTPWKINRHIFDVVLKVWNSGERLGKIPPAMYDQPE 725
Query: 525 VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
P + DT+ +A++ + + K+ N HS RC+ K+ +AR D Y PHN
Sbjct: 726 PEKPADHDTDPKAKVAYLQRHKAYMSKKANN-HSDRCNTNYKIEIARAFLG-DTVYLPHN 783
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
+DFRGRAYP+ P LNHLG DL RG+L+F E +PLG+ GL W+KIHLANLY G DK +D
Sbjct: 784 VDFRGRAYPIPPNLNHLGDDLSRGLLKFAEAKPLGERGLRWMKIHLANLY--GYDKASFD 841
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R+ F HLDDIFDSA PLEG+ WW +A+DP+QCLA C+ + AL SP P S +P
Sbjct: 842 ERVVFVHEHLDDIFDSATNPLEGRGWWKKADDPWQCLATCMEIRAALESPEPTEYASSLP 901
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDG+CNGLQHYAALG D GA VNL D+P+DVY+ +AT V ++ +DA+ D +
Sbjct: 902 VHQDGTCNGLQHYAALGGDAQGAQQVNLSVTDRPSDVYTHVATMVESVLAQDAKNDLR-- 959
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCY 824
+A+ L ++ RK+VKQTVMT+VYGVT+IGARDQI+R+L++R + + + + A+ Y
Sbjct: 960 ----YAKMLSGKIARKVVKQTVMTTVYGVTFIGARDQIERQLRDRRDLPAE-ECWLAAAY 1014
Query: 825 AAKTTLTALQEMFEAARSIMGWLGDCAKV 853
AK TL + ++F A+ I WL AK+
Sbjct: 1015 LAKITLACIGDLFTGAKHIQNWLNLSAKL 1043
>F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_363576 PE=3 SV=1
Length = 1134
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/509 (42%), Positives = 307/509 (60%), Gaps = 24/509 (4%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPA--NQIGDGPPDIRPAFKHTLKNISTDSQNGSKR 410
W Q +V+VGS L+ L+D A + A + + + +PAF H + + ++
Sbjct: 356 WTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISEDQPAFYHAYEYVR------GQK 409
Query: 411 YGVIECDSLVQQGLEKSA-RHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQ 468
GVI + +V + K R + P ++PMLV P W YD+G YL+ S MR +++
Sbjct: 410 LGVIRLNPVVADRIAKDGLRETLHPRHLPMLVKPKPWLNYDQGGYLYNKSSAMRFKDSQE 469
Query: 469 QRDAVKRAP-VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRK-DVP 526
Q+ ++ A + + V+ L+ LGST W++N+ V V+ +W G L L D P
Sbjct: 470 QQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVFDVVLTVWNSGERLCKLPPSVFDQP 529
Query: 527 LPEELD--TEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
PE+ D + D + +K + HS RC + K+ +AR D Y PHN
Sbjct: 530 EPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDRCSVNYKIEIARAFLG-DTMYLPHN 588
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
LDFRGRAYP+ P+LNH+G DL RG+L FGE +PLG+ GL WLKIHLANLY G DK +D
Sbjct: 589 LDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANLY--GFDKANFD 646
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R+ + LD+++DSA KPLEG+RWW +A+DP+QCLA C+ L AL S PE MS +P
Sbjct: 647 ERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQCLATCMELRAALESEDPEAYMSSLP 706
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDG+CNGLQHYAALG D GA VNL ++P+DVY+ +A V + DA D K
Sbjct: 707 VHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSDVYTYVANMVQRQLDEDAANDHK-- 764
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCY 824
+A+ L +V RK+VKQTVMT+VYGVTYIGARDQI+R+LK+R I ++ + + A+ Y
Sbjct: 765 ----YAKMLQGKVARKVVKQTVMTTVYGVTYIGARDQIERQLKDRKDIPEE-ECWNAAAY 819
Query: 825 AAKTTLTALQEMFEAARSIMGWLGDCAKV 853
AK TL + ++F A++I WL CA++
Sbjct: 820 LAKKTLFCIGDLFSGAKAIQTWLNLCARL 848
>H6BKV4_EXODN (tr|H6BKV4) DNA-directed RNA polymerase OS=Exophiala dermatitidis
(strain ATCC 34100 / CBS 525.76 / NIH/UT8656)
GN=HMPREF1120_00947 PE=3 SV=1
Length = 1425
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 366/715 (51%), Gaps = 60/715 (8%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMK--SLFLGWFEPLRNAIVAEQELC 216
RQ K+E +A + A + ++ + + + +L + K +L W E L I E +L
Sbjct: 353 RQRKLERDAIQSALQRWKTEYQKRARSGITGDLAHGKIGALLWQWHEILAEKITNEIKLA 412
Query: 217 KD-----------TRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGA 265
++ +LR P+ LPA+ +A +T LM + M+ AK+V+
Sbjct: 413 REEDATPGKKTAQQKLRAECSPFLELLPAERLAAVTSVALMQI-MSKVGASKQAKLVRLV 471
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
+++G+AIE E + +K KA + + AP+K
Sbjct: 472 TELGQAIETEYDATQVAQKRNAMLKAKEKLAETAPGAPLKWDETLDNTLHRRSSHHAATP 531
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTA--YIQPPANQIG 383
K W + K+GS L +L+ DTA I G
Sbjct: 532 YAYK---------------------KNWSKTIHAKLGSVLCELMFDTAKIMITREDKTTG 570
Query: 384 DGPPDIRPAFKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIPYMPMLVPP 442
+P F H ST QNG +R G + + V+ + + A H++ +PM+ PP
Sbjct: 571 KKVSIAQPVFIH-----STSYQNG-RRVGTVSLHEDFVKILVSEPAEHLIAKQLPMVCPP 624
Query: 443 NNWTGYDKGAYLFLPSYVMRI-HGAKQQRD-AVKRAPVTQLNPVFEALNTLGSTKWRVNK 500
W G+ G +L +R+ + Q+D V A L+ +F ++ LG T WR+NK
Sbjct: 625 RPWKGFYDGGFLESSQPFLRVKYNETSQKDYGVAAAERGDLDQLFAGVDILGKTGWRINK 684
Query: 501 RVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNER---H 557
+V SV+ + W G +A+L E E+ +W W +K +R +NER H
Sbjct: 685 QVFSVMLEAWNSGEEIANLPPLNKQYPEVERPAENAPPKERWNWFLK-MRMIDNERSGIH 743
Query: 558 SQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRP 617
S RC ++ +A+ DE FY PHN+DFRGRAYP+ PYLN +G+D RG+L F GR
Sbjct: 744 SNRCFQNFQMEIAKAYLDET-FYLPHNVDFRGRAYPIPPYLNQMGADNARGLLLFDRGRE 802
Query: 618 LGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDP 677
LG GL WLKIHLAN+Y G DK R F +H+DD++DS PL+G+RWWL AEDP
Sbjct: 803 LGADGLRWLKIHLANVY--GYDKASLSDRAQFPMDHIDDVYDSVQNPLKGRRWWLTAEDP 860
Query: 678 FQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQ 737
+QCLA C LA AL SP P +S +P+HQDGSCNGLQHYAALG D GA VNL GD+
Sbjct: 861 WQCLATCYELANALDSPDPTKYVSRLPIHQDGSCNGLQHYAALGGDIAGARQVNLEPGDK 920
Query: 738 PADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIG 797
PADVY+G+ V ++ DA K +AL A+ L ++ RK+VKQTVMT+VYGVT++G
Sbjct: 921 PADVYTGVCELVKADIKEDAAKG-----DAL-AKMLDGRITRKVVKQTVMTNVYGVTFLG 974
Query: 798 ARDQIKRRLKERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
A Q+++++ +A+L G AS Y A+ L +F A I WLGDCA
Sbjct: 975 AVRQVRKQVDALIPEVVEARLSGKASSYIARKIFKGLGALFTGAHEIQYWLGDCA 1029
>F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_114135 PE=3 SV=1
Length = 986
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/509 (42%), Positives = 307/509 (60%), Gaps = 24/509 (4%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPA--NQIGDGPPDIRPAFKHTLKNISTDSQNGSKR 410
W Q +V+VGS L+ L+D A + A + + + +PAF H + + ++
Sbjct: 208 WTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISEDQPAFYHAYEYVR------GQK 261
Query: 411 YGVIECDSLVQQGLEKSA-RHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQ 468
GVI + +V + K R + P ++PMLV P W YD+G YL+ S MR +++
Sbjct: 262 LGVIRLNPVVADRIAKDGLRETLHPRHLPMLVKPKPWLNYDQGGYLYNKSSAMRFKDSQE 321
Query: 469 QRDAVKRAP-VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRK-DVP 526
Q+ ++ A + + V+ L+ LGST W++N+ V V+ +W G L L D P
Sbjct: 322 QQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVFDVVLTVWNSGERLCKLPPSVFDQP 381
Query: 527 LPEELD--TEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
PE+ D + D + +K + HS RC + K+ +AR D Y PHN
Sbjct: 382 EPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDRCSVNYKIEIARAFLG-DTMYLPHN 440
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
LDFRGRAYP+ P+LNH+G DL RG+L FGE +PLG+ GL WLKIHLANLY G DK +D
Sbjct: 441 LDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANLY--GFDKANFD 498
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R+ + LD+++DSA KPLEG+RWW +A+DP+QCLA C+ L AL S PE MS +P
Sbjct: 499 ERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQCLATCMELRAALESEDPEAYMSSLP 558
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDG+CNGLQHYAALG D GA VNL ++P+DVY+ +A V + DA D K
Sbjct: 559 VHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSDVYTYVANMVQRQLDEDAANDHK-- 616
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCY 824
+A+ L +V RK+VKQTVMT+VYGVTYIGARDQI+R+LK+R I ++ + + A+ Y
Sbjct: 617 ----YAKMLQGKVARKVVKQTVMTTVYGVTYIGARDQIERQLKDRKDIPEE-ECWNAAAY 671
Query: 825 AAKTTLTALQEMFEAARSIMGWLGDCAKV 853
AK TL + ++F A++I WL CA++
Sbjct: 672 LAKKTLFCIGDLFSGAKAIQTWLNLCARL 700
>D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniella heveanensis
GN=RPO41 PE=3 SV=1
Length = 1256
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/642 (36%), Positives = 351/642 (54%), Gaps = 45/642 (7%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK 286
Y LP + +A+IT+ ++M M+ + G+ K ++G +G+A+E E F +T
Sbjct: 321 YLQLLPVEKLALITILEVM--RMSGSGGISDGMKALRGMLAVGKAVETE-----FRAETI 373
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P ++ +L
Sbjct: 374 KNIAGVDSHHWLRTIDP-----QTQKPSRQLVGSVWRRIGEQVKTSKLEETSDSLSTATH 428
Query: 347 RD---DWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLKNI 400
D W P W Q AQ+ VGS L+ L+ A ++ + G+ + +PAF H + I
Sbjct: 429 DDLHQVWTPPWSQMAQLGVGSELVDALLKVAKVERVGRNPETGEEVVEEQPAFTHAYEYI 488
Query: 401 STDSQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLFLPS 458
K+ GVI+ + +V L + + +VI ++PMLV P WT ++ G YL
Sbjct: 489 R------GKKLGVIKHNPVVAARLARDSVGVVIHPKHLPMLVEPKPWTSHNNGGYLLHSV 542
Query: 459 YVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
+MR + +Q+ +K A L PVF L+ L ST W +N++V VI +W G +A
Sbjct: 543 PIMRYKESAEQQSYLKTASEQGHLEPVFHGLDVLSSTAWSINRKVFDVILNVWNSGEAIA 602
Query: 518 DLV---DRKDVPLPEELDTEDEAEIRKWKW--SVKNVRKENNERHSQRCDIELKLAVARK 572
D+ ++ +PE+ D D+ ++ + +K+V + H++RC L +AR
Sbjct: 603 DIPASEEKSTYDVPEKPDPRDQDPQKRSLYIERMKSVMAAQRKDHAERCKFNYNLEIARS 662
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
+ D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG + LG++GL WL IHLAN
Sbjct: 663 YLN-DVFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNKKALGETGLKWLHIHLAN 721
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
+Y G DK ++ R F + H DIFDSA+ PL+GKRWWL+AEDP+QCLA C +A ALR
Sbjct: 722 VY--GFDKASFEERARFAQEHEADIFDSADNPLDGKRWWLQAEDPWQCLATCFEIAAALR 779
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
S P S +P+HQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G+ V ++
Sbjct: 780 SSDPTQYESSLPIHQDGTCNGMQHYAALGGDVRGAKAVNLEHGDRPADIYTGVVNIVNKV 839
Query: 753 MRRDAEKDPKTNPNALHARNLINQ-VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
+ D +K L LI + + RK+VKQTVMT+VYGVT++GAR+QI ++L R
Sbjct: 840 IEEDQKK-------GLDVALLIKKPLGRKVVKQTVMTTVYGVTFVGAREQIAKQLTARGD 892
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ +F S Y AKT L + ++F A++IM WL AK+
Sbjct: 893 FAQE-HVFLVSGYIAKTVLNCIGDLFSGAKAIMDWLTTSAKL 933
>R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_006120 PE=4 SV=1
Length = 1544
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/637 (37%), Positives = 359/637 (56%), Gaps = 51/637 (8%)
Query: 227 PYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKT 285
P+ LPA +A+IT+ +LM M+ GV K + Q+G AIE E E
Sbjct: 612 PFLRLLPASKLALITILELMR--MSGNGGVSDGMKTTRALLQVGRAIEMEYH----SEVV 665
Query: 286 KKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVR 345
+K K N + K+G QK Q+ G++
Sbjct: 666 RKNPKIFQNAH-TAQTTLRKRGLIDLAARREIKAW--------------QKQQEDEGVLS 710
Query: 346 GRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNISTDS 404
W Q + +VGS L+Q L+ A + A ++ G + +PAF T + +
Sbjct: 711 S---IPRWTQTIRARVGSYLVQHLMHVATVNRKATDRDGVLWEEDQPAFYSTYQYL---- 763
Query: 405 QNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
G K+ GVI+ + ++ + L+K S + + P ++PMLVPP WT +D G Y + MR
Sbjct: 764 --GGKKLGVIKLNEVIAKRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMR 821
Query: 463 IHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD 521
+ +Q ++ A L+ V AL+ LG+T W++NK + V+ ++W G +AD+
Sbjct: 822 FKDSAEQGSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMTEVWNSGKDIADMPP 881
Query: 522 -RKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDED 577
+ + P++ D D +I+ ++ +++ N +R HSQRCD+ KL +AR E
Sbjct: 882 VQMEAQEPQKPDNYDH-DIKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEIARAYLGER 940
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L F + +PLGK+GL WL+IH++N++ G
Sbjct: 941 -FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLLFADSKPLGKAGLRWLRIHISNVF--G 997
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT-P 696
DK + R F +H DI DS +PL+G RWWL+A+DP+QCL+AC+ L AL P P
Sbjct: 998 YDKASFAEREQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLSACMELKAALEHPEGP 1057
Query: 697 ETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRD 756
E S +PVHQDG+CNGLQHYAALG D GA VNL G++PADVYSG+A V++ + +
Sbjct: 1058 EAYGSCLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGERPADVYSGVADLVIKALDEE 1117
Query: 757 AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDA 816
A K + A L +V RK+VKQTVMT+VYGVT+IGA++Q+ R+L +R + +
Sbjct: 1118 AAKGERL------AGILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE- 1170
Query: 817 QLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
LF A+ Y AK ++ + +F A+ I WL AKV
Sbjct: 1171 DLFAAASYLAKVIMSCIGNLFSGAQKIQDWLSFSAKV 1207
>Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=UM02493.1 PE=3 SV=1
Length = 1566
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/641 (37%), Positives = 365/641 (56%), Gaps = 59/641 (9%)
Query: 227 PYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHE--ARIYRFMEK 284
P+ LPA +A+IT+ +LM + N + K + Q+G AIE E + I R K
Sbjct: 637 PFLRLLPASKLALITILELMRM-SGNGDVSDGMKTTRAVLQVGRAIEMEYHSDIVRKNPK 695
Query: 285 TKKKT---KATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQAL 341
+ + T G DLA ++ QK Q+
Sbjct: 696 IFQNAYTAQTTLRKRGLIDLAARRE------------------------IKAWQKQQEDE 731
Query: 342 GIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNI 400
G++ W Q + +VGS L+Q L++ A + A ++ G + +PAF T + +
Sbjct: 732 GVLSS---IPSWTQTVRARVGSYLVQHLMNVATVNRKATDRDGVLWEEDQPAFYSTYQYL 788
Query: 401 STDSQNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPS 458
G K+ GVI+ + ++ + L+K S + + P ++PMLVPP WT +D G Y +
Sbjct: 789 ------GGKKLGVIKLNEVIARRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQ 842
Query: 459 YVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
MR + +Q ++ A L+ V AL+ LG+T W++NK + V+ ++W G +A
Sbjct: 843 SAMRYKDSAEQGSYLRVASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNSGKDIA 902
Query: 518 DLVDRK-DVPLPEELDTEDEAEIRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKM 573
D+ + +VP P++ D D +I+ ++ +++ N +R HSQRCD+ KL +AR
Sbjct: 903 DMPPVEMEVPEPQKPDNYDH-DIKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEIARAY 961
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
E FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L F + +PLGK+GL WL+IH++N+
Sbjct: 962 LGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLLFADSKPLGKAGLRWLRIHISNV 1020
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL-R 692
+ G DK + R F +H DI DS +PL+G WWL+A+DP+QCLAAC+ L AL
Sbjct: 1021 F--GYDKASFGEREQFAIDHEADIRDSVERPLDGNCWWLKADDPWQCLAACMELKAALEH 1078
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
+ PE S +PVHQDG+CNGLQHYAALG D GA VNL G++PADVYSG+A V+++
Sbjct: 1079 AEGPEAYESCLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGERPADVYSGVADLVIKV 1138
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
+ +A K + A L +V RK+VKQTVMT+VYGVT+IGA++Q+ R+L +R +
Sbjct: 1139 LDEEAAKGERL------ASILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDV 1192
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ LF A+ + AK ++ + +F A+ I WL AKV
Sbjct: 1193 PAE-DLFAAASFLAKVIMSCIGNLFSGAQKIQDWLSFSAKV 1232
>K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssonina brunnea f. sp.
multigermtubi (strain MB_m1) GN=MBM_00814 PE=3 SV=1
Length = 1461
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 345/645 (53%), Gaps = 58/645 (8%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLL--MTNTNGVGSAKVVQGASQIGEAIEHEARIY 279
R+ +GP+ LP D +A +T+ M + M G+ + + I +++E E
Sbjct: 439 RVIYGPFLRLLPPDKLAAVTILSAMTTMSSMGLDKGIPLSNAIMA---IAKSVEDECAFD 495
Query: 280 RFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQ 339
+ +KK N D+ +K+ + +
Sbjct: 496 TIQKASKKNIWP--NSNNRPDIGQLKRATRFRTSKPLIDLDQ-------------SETAE 540
Query: 340 ALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA---NQIGDGPPDIRPAFKHT 396
AL + + W + KVG+ LM LI+ A + P A + G+ ++PAF H
Sbjct: 541 AL-------EDRQWPLAMRAKVGAFLMSALIEVAKV-PVALTHPETGEIVTQMQPAFCHA 592
Query: 397 LKNISTDSQNGSKRYGVIECDSLVQQGLEKSARH-MVIPYMPMLVPPNNWTGYDKGAYLF 455
K+ GVI + + L++ H ++ ++PMLV P W+ + KG +L
Sbjct: 593 ------HQYKLGKKVGVIMANKSLVATLKREPVHSLLAKHLPMLVEPEPWSDFSKGGFLA 646
Query: 456 LPSYVMRIHGAKQQRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG 513
PS +MR+ + + A + Q + F+ LN LG T WR+N++V V+ + W G
Sbjct: 647 HPSKIMRVKTGDKDQRYYAEAAIGQGDMTLTFKGLNVLGKTSWRINQQVFDVMLEAWNAG 706
Query: 514 GGLADLV----DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAV 569
+A++ + K P PE ++D E R+W +VKNV + HSQRC +L +
Sbjct: 707 DAIANIPPETPNLKAPPEPEA--SQDPLERRQWIRAVKNVENHRSGLHSQRCFQNFQLEI 764
Query: 570 ARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIH 629
AR +K E+ FY+PHN+DFRGRAYP+ PYLNH+G+D CRG+L FG+GR LG+SGL WLKIH
Sbjct: 765 ARALKHEE-FYFPHNVDFRGRAYPIPPYLNHMGADHCRGLLIFGKGRELGESGLRWLKIH 823
Query: 630 LANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAE 689
AN++ G DK R AF H+D +F++A PL G RWWL AEDP+Q LAAC+ L
Sbjct: 824 AANVF--GFDKASLSEREAFAMKHMDQMFEAAKNPLGGTRWWLNAEDPWQFLAACMELKN 881
Query: 690 ALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRV 749
A+ SP P +SH+PVHQDG+CNGLQHYAALG D GA VNL D+PADVY+ +A V
Sbjct: 882 AMESPDPTRFVSHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPADRPADVYTAVADLV 941
Query: 750 LEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 809
E + D N N A+ L +V RK+VKQTVMT+VYGVTYIGA+ Q++R+L
Sbjct: 942 KESIAEDL-----ANGNQ-KAKILEGKVTRKVVKQTVMTNVYGVTYIGAKAQVRRQLVAA 995
Query: 810 CAIEDDAQLFGA---SCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ ++ + Y A +AL MF+ A I WLG+CA
Sbjct: 996 FPGLPNNEVINPNSLAAYVATKIFSALSTMFKGAHDIQFWLGECA 1040
>E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr10944 PE=3 SV=1
Length = 1551
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/511 (42%), Positives = 316/511 (61%), Gaps = 28/511 (5%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP--PDIRPAFKHTLKNISTDSQNGSKR 410
W Q + +VGS L+Q L+ A + A DG + +PAF T + + G K+
Sbjct: 728 WTQPVRARVGSYLVQHLMHVATVNRKATD-RDGVLWEEDQPAFYSTYQYL------GGKK 780
Query: 411 YGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQ 468
GVI+ + ++ + L+K S + + P ++PMLVPP WT +D G Y + MR + +
Sbjct: 781 LGVIKLNEVIAKRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAE 840
Query: 469 QRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD-RKDVP 526
Q ++ A L+ V AL+ LG+T W++NK + V+ ++W G LAD+ D P
Sbjct: 841 QGSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNSGEDLADMPPIEMDAP 900
Query: 527 LPEELDTEDEAEIRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDEDGFYYPH 583
P++ D D +++ ++ +++ N +R HSQRCD+ KL +AR E FY+PH
Sbjct: 901 EPQKPDNYDH-DMKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEIARAYVGER-FYFPH 958
Query: 584 NLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCY 643
N+DFRGRAYPM P+LNH+G+DLCRG+L F + +PLGK+GL WL+IH++N++ G DK +
Sbjct: 959 NMDFRGRAYPMPPHLNHIGNDLCRGLLMFADSKPLGKAGLRWLRIHISNVF--GYDKASF 1016
Query: 644 DGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT-PETTMSH 702
R F +H DI DS +PL+G RWWL+A+DP+QCLA+C+ L AL P PE S
Sbjct: 1017 AEREQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLASCMELKAALEHPEGPEAYESS 1076
Query: 703 MPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPK 762
+PVHQDG+CNGLQHYAALG D GA VNL G++PADVYSG+A V++++ +A K +
Sbjct: 1077 LPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGEKPADVYSGVADLVIKVLDDEAAKGDR 1136
Query: 763 TNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGAS 822
A L +V RK+VKQTVMT+VYGVT+IGA++Q+ R+L +R + + LF A+
Sbjct: 1137 L------ASILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE-DLFAAA 1189
Query: 823 CYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ AK ++ + +F A+ I WL AKV
Sbjct: 1190 SHLAKVIMSCIGNLFSGAQKIQDWLSFSAKV 1220
>M5BWD9_9HOMO (tr|M5BWD9) DNA-directed RNA polymerase, mitochondrial
OS=Rhizoctonia solani AG-1 IB GN=RPO41 PE=4 SV=1
Length = 564
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/461 (45%), Positives = 301/461 (65%), Gaps = 20/461 (4%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQ-PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
W Q +V+VGS L+ ++++AYI+ ++ G+ + +PAF H+ + I K+
Sbjct: 115 WTQVGRVRVGSFLVDGVMNSAYIKRNGVDENGEHYSEDQPAFMHSYEYIR------GKKL 168
Query: 412 GVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQ 469
GVI+ + +V + + + S R + P ++PMLV P W +DKG YL L S VMRI + +Q
Sbjct: 169 GVIKLNPVVGEKMARDSIRDTLHPRHLPMLVKPQPWEDFDKGGYLKLRSTVMRIKDSPEQ 228
Query: 470 RDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRK-DVPL 527
+K A ++ V+E L+ LG T WR+N ++L+V+ Q+W +G GLA + + D+
Sbjct: 229 LSYLKHASAAGHVDFVYECLDALGETPWRINDKILNVVLQVWNEGKGLAGIPPVQLDIEE 288
Query: 528 PEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 587
P + ED + + +K++ + H +RC++ KL VAR + D FY PHNLDF
Sbjct: 289 PPQPTDEDPRARATYLFKMKSILADKRNNHGERCNVNYKLEVARAFVN-DEFYMPHNLDF 347
Query: 588 RGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRI 647
RGRAYP+ P+LNH+G DLCRG+L F E R LG+ GL WLKIHLAN++ G DK +D R+
Sbjct: 348 RGRAYPIPPHLNHIGDDLCRGLLLFSERRSLGERGLRWLKIHLANVF--GYDKASFDERV 405
Query: 648 AFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQ 707
+F E HL+DI DSA KPL G RWWL+A+DP+QCL+ C+ L EAL+ P S++PVHQ
Sbjct: 406 SFVEKHLEDIRDSAEKPLNGGRWWLKADDPWQCLSTCMELTEALKFQVPALYPSNLPVHQ 465
Query: 708 DGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNA 767
DG+CNGLQHYAALG DK GA VNL GD+PADVYS +A V ++ +DA +
Sbjct: 466 DGTCNGLQHYAALGGDKTGAQHVNLERGDRPADVYSHVARMVDVVVDQDAAE------GV 519
Query: 768 LHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
A+ + ++ RK+VKQTVMT+VYGVT+IGARDQI+++L++
Sbjct: 520 PEAKVVQGKIARKVVKQTVMTTVYGVTFIGARDQIEKQLRD 560
>G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00004g535 PE=3 SV=1
Length = 1466
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/522 (42%), Positives = 303/522 (58%), Gaps = 48/522 (9%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTD--------- 403
W Q + KVGS L+ LL A I+ +RP K LK++ D
Sbjct: 603 WSQPVRAKVGSVLVSLLFQVAKIK------------VRPTNKKVLKHMDKDLAIDQPALV 650
Query: 404 ---SQNGSKRYGVIECDSLVQQGL--EKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPS 458
G K+ GVI + L E + +PM+ P W ++ GAY F P+
Sbjct: 651 HGYQFVGGKKIGVIRLHDEFSKKLMTEPLKGTTLAKQLPMIAKPRPWCAWNDGAYYFTPT 710
Query: 459 YVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
++R+ + +Q VK A L+ +F L+ LGST W +N++V VI Q+W G A
Sbjct: 711 RMVRVKDSLEQTMYVKEASKHGNLDRLFTGLDVLGSTAWTINQKVFDVILQVWNTGDKFA 770
Query: 518 DL-------VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
D+ V+ ++P P A ++ + +RK + HSQRCD+ KL +A
Sbjct: 771 DIPPTFEKDVNMPEMPQPNADAAAKAAFKIAYQ-EMALIRKNH---HSQRCDVNFKLEIA 826
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
R +E FY+PHN+DFRGRAY M P+LNHLG+DLCRG+L+F E +PLG+SGL WLKIHL
Sbjct: 827 RAFYNE-VFYFPHNVDFRGRAYAMPPHLNHLGNDLCRGLLKFSEKKPLGESGLRWLKIHL 885
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
+NL GG DK R + E+ ++D+FDSA PL GKRWWLE+EDP+Q LA C+ L A
Sbjct: 886 SNL--GGYDKASLMAREEWAESRMEDVFDSARDPLGGKRWWLESEDPWQMLATCMELEAA 943
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
+ S P S+MPVHQDG+CNGLQHYAALG D +GA VNL D+P DVY+G+A V
Sbjct: 944 MSSKDPLKYESNMPVHQDGTCNGLQHYAALGGDIVGAKQVNLEPADKPQDVYTGVADLVN 1003
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
+ + DA+ N N L A++L+ ++RK+VKQTVMT+VYGVT+IGA++Q+K RL E+
Sbjct: 1004 QAVAEDAQ-----NGNEL-AKDLLGHINRKVVKQTVMTNVYGVTFIGAKNQVKSRLMEKG 1057
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
D ++ S Y K T+LQ MF A I W G+CAK
Sbjct: 1058 VWPRD-RVDKLSIYLTKKIFTSLQSMFTGAHLIQKWFGECAK 1098
>D2JWV0_9TREE (tr|D2JWV0) DNA-directed RNA polymerase OS=Filobasidiella depauperata
PE=3 SV=1
Length = 1181
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/641 (36%), Positives = 345/641 (53%), Gaps = 44/641 (6%)
Query: 228 YFNELPADMMAVITMHKLMGLLMTNTNGV-GSAKVVQGASQIGEAIEHEARIYRFMEKTK 286
Y + LP D +A+IT+ ++M M + G+ KV++G +G+A+E E F +T
Sbjct: 411 YLSLLPVDKLALITILEIMR--MAGSGGIIDGMKVLRGMVAVGKAVETE-----FRAETI 463
Query: 287 KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRG 346
K D+ + P + ++
Sbjct: 464 KNVAGIDSYHWMRTIDPQTQKPSRQLISSVWKKIGNQAGESQRHISSSSNSEDM------ 517
Query: 347 RDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPANQ--IGDGPPDIRPAFKHTLKNISTD 403
+D W P W + Q+ VGS L+ L+ A ++ A G+ + +PAF H + +
Sbjct: 518 KDLWTPAWSRMIQLGVGSELVDALLKVAKVKREATNAVTGEKVVEEQPAFTHAYEYVR-- 575
Query: 404 SQNGSKRYGVIECDSLVQQGLEKSARHMVI--PYMPMLVPPNNWTGYDKGAYLF---LPS 458
K GVI+ + +V + L +VI ++PMLVPP W +D G YL L
Sbjct: 576 ----GKCLGVIKLNPVVAERLANDDIGVVIHPKHLPMLVPPLPWRAHDNGGYLMHSGLTV 631
Query: 459 YVMRIHGAKQQRDAVKRAP-VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
VMR + +Q+ +K A L PVF L+ L ST W++N++V V+ + W +G +A
Sbjct: 632 PVMRYKESLEQQKWLKAAAEAGHLEPVFHGLDVLSSTPWQINRKVFDVVLEAWNQGHAIA 691
Query: 518 DLVDRKDV-----PLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARK 572
D+ K++ P E +D + +K VR + + H++RC + +AR
Sbjct: 692 DIPPSKEMADYEFPDKPEPANQDPQLRLLYVEKMKKVRAQQRKDHAERCKFNYNIEIARS 751
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
+D FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L FG +PLG +GL WLKIHLAN
Sbjct: 752 YL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGLTGLKWLKIHLAN 810
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR 692
+Y G DK + R F ++ +IFDSA PL G RWWL+AEDP+QCLAAC L ALR
Sbjct: 811 VY--GYDKASFGERAKFAADNEKEIFDSAENPLTGNRWWLKAEDPWQCLAACFELTAALR 868
Query: 693 SPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEI 752
S P S +PVHQDG+CNG+QHYAALG D GA AVNL GD+PAD+Y+G+ V ++
Sbjct: 869 SSDPAAYESALPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKV 928
Query: 753 MRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI 812
+ D + + A + + RK+VKQTVMT+VYGVT++GARDQI ++L R I
Sbjct: 929 IAEDQRQCHEV------ASLIKGPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLNTRGDI 982
Query: 813 EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ +F S Y AKT L + ++F A++IM WL A++
Sbjct: 983 APE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARL 1022
>C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_059100 PE=3 SV=1
Length = 1385
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 241/646 (37%), Positives = 345/646 (53%), Gaps = 62/646 (9%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLL-MTNTN-GVGSAKVVQGASQIGEAIEHEARIY 279
R + P+ N + D +A IT+ M L T N G+ +++ +G A++ E
Sbjct: 440 RCEYAPFMNSIGPDRLAAITILATMNALGKTGMNKGIRLTRLIM---LLGRAVQEEYVTD 496
Query: 280 RFMEKTKKKTKATDN---CEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 336
R E T K+ D+ + DL P +G +K
Sbjct: 497 RIQE-TPSKSAPLDSGRRAKLVQDLIPSNRG---------------------------RK 528
Query: 337 NQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTA--YIQPPANQIGDGPPDIRPA 392
+ I + + +P W + K+GS L +L + ++ + G+ +PA
Sbjct: 529 GVRESLIEKYNEIHEPIKWSAAVEAKIGSLLASMLFSSTKVVVKQQNTETGEITFVKQPA 588
Query: 393 FKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGA 452
F+H + + G V DS+V + + A ++ ++PM+ PP WT Y G
Sbjct: 589 FRHVYQ-----LEKGHSVGFVHIHDSVVDRFRREPASSLLAKHLPMVSPPQPWTSYRYGG 643
Query: 453 YLFLPSYVMRIHGAKQQ---RDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQ 508
+L P+ +MR Q R V+ A L+ +F LN LG T WR+NK V V+ +
Sbjct: 644 FLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIFAGLNVLGKTGWRINKPVFDVMLE 703
Query: 509 IWAKGGGLADL--VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
W G LAD+ VD ++P P + +T+D ++R + S V + + HSQRC L+
Sbjct: 704 AWNSGDELADIAPVD-PNLPEPTKPETDDPVQLRAYYRSKTLVDNKRSGLHSQRCFQNLQ 762
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L +AR E FY PHN+DFRGRAYP+ PY N +G D+CRG+L F +GR LG+ GL WL
Sbjct: 763 LEIARAYVGET-FYLPHNMDFRGRAYPLPPYFNQMGPDMCRGLLLFSKGRELGERGLRWL 821
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIH+AN+Y G DK +D R F +HLDD+ DSA K L G+RWWLEA DPFQCLAACI
Sbjct: 822 KIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEKGLNGRRWWLEASDPFQCLAACIE 879
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L AL P P +SH+P+HQDGSCNGLQHYAALG D +GA VNL D+P+D+YS +A
Sbjct: 880 LKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVA 939
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
V + + ++A N L A+ L ++V+RK+VKQTVMT+VYGVT++GA Q++++L
Sbjct: 940 DHVRQSIAQEAAAG-----NQL-AKILEDKVNRKIVKQTVMTNVYGVTFLGAIRQVQKQL 993
Query: 807 KERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ + G + Y + AL MF A I WLGDCA
Sbjct: 994 NAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHEIQFWLGDCA 1039
>E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_05010 PE=3 SV=1
Length = 1385
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 342/644 (53%), Gaps = 58/644 (9%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRF 281
R + P+ N + D +A IT+ M L G ++ + +G A++ E R
Sbjct: 440 RCEYAPFMNSIGPDRLAAITILATMNALGKTGMNKG-IRLTRLIMLLGRAVQEEYVTDRI 498
Query: 282 MEKTKKKTKATDN---CEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQ 338
E T K+ D+ + DL P +G +K
Sbjct: 499 QE-TPSKSAPLDSGRRAKLVQDLIPSNRG---------------------------RKGV 530
Query: 339 QALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTA--YIQPPANQIGDGPPDIRPAFK 394
+ I + + +P W + K+GS L +L + ++ + G+ +PAF+
Sbjct: 531 RESLIEKYNEIHEPIKWSAAVEAKIGSLLASMLFSSTKVVVKQQNTETGEITFVKQPAFR 590
Query: 395 HTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYL 454
H + + G V DS+V + + A ++ ++PM+ PP WT Y G +L
Sbjct: 591 HVYQ-----LEKGHSVGFVHIHDSVVDRFRREPASSLLAKHLPMVSPPQPWTSYRYGGFL 645
Query: 455 FLPSYVMRIHGAKQQ---RDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
P+ +MR Q R V+ A L+ +F LN LG T WR+NK V V+ + W
Sbjct: 646 NQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIFAGLNVLGKTGWRINKPVFDVMLEAW 705
Query: 511 AKGGGLADL--VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLA 568
G LAD+ VD ++P P + +T+D ++R + S V + + HSQRC L+L
Sbjct: 706 NSGDELADIAPVD-PNLPEPTKPETDDPVQLRAYYRSKTLVDNKRSGLHSQRCFQNLQLE 764
Query: 569 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKI 628
+AR E FY PHN+DFRGRAYP+ PY N +G D+CRG+L F +GR LG+ GL WLKI
Sbjct: 765 IARAYVGET-FYLPHNMDFRGRAYPLPPYFNQMGPDMCRGLLLFSKGRELGERGLRWLKI 823
Query: 629 HLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLA 688
H+AN+Y G DK +D R F +HLDD+ DSA K L G+RWWLEA DPFQCLAACI L
Sbjct: 824 HIANVY--GYDKASFDERAQFAMDHLDDVIDSAEKGLNGRRWWLEASDPFQCLAACIELK 881
Query: 689 EALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
AL P P +SH+P+HQDGSCNGLQHYAALG D +GA VNL D+P+D+YS +A
Sbjct: 882 NALACPDPTKYISHLPIHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVADH 941
Query: 749 VLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
V + + ++A N L A+ L ++V+RK+VKQTVMT+VYGVT++GA Q++++L
Sbjct: 942 VRQSIAQEAAAG-----NQL-AKILEDKVNRKIVKQTVMTNVYGVTFLGAIRQVQKQLNA 995
Query: 809 RCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ + G + Y + AL MF A I WLGDCA
Sbjct: 996 FFPELSERNVVGKCATYITRKIFAALSSMFTGAHEIQFWLGDCA 1039
>J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_00271 PE=3 SV=1
Length = 1385
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 342/644 (53%), Gaps = 58/644 (9%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRF 281
R + P+ N + D +A IT+ M L G ++ + +G A++ E R
Sbjct: 440 RCEYAPFMNSIGPDRLAAITILATMNALGKTGMNKG-IRLTRLIMLLGRAVQEEYVTDRI 498
Query: 282 MEKTKKKTKATDN---CEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQ 338
E T K+ D+ + DL P +G +K
Sbjct: 499 QE-TPSKSAPLDSGRRAKLVQDLIPSNRG---------------------------RKGV 530
Query: 339 QALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTA--YIQPPANQIGDGPPDIRPAFK 394
+ I + + +P W + K+GS L +L + ++ + G+ +PAF+
Sbjct: 531 RESLIEKYNEIHEPIKWSAAVEAKIGSLLASMLFSSTKVVVKQQNTETGEITFVKQPAFR 590
Query: 395 HTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYL 454
H + + G V DS+V + + A ++ ++PM+ PP WT Y G +L
Sbjct: 591 HVYQ-----LEKGHSVGFVHIHDSVVDRFRREPASSLLAKHLPMVSPPQPWTSYRYGGFL 645
Query: 455 FLPSYVMRIHGAKQQ---RDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
P+ +MR Q R V+ A L+ +F LN LG T WR+NK V V+ + W
Sbjct: 646 NQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIFAGLNVLGKTGWRINKPVFDVMLEAW 705
Query: 511 AKGGGLADL--VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLA 568
G LAD+ VD ++P P + +T+D ++R + S V + + HSQRC L+L
Sbjct: 706 NSGDELADIAPVD-PNLPEPTKPETDDPVQLRAYYRSKTLVDNKRSGLHSQRCFQNLQLE 764
Query: 569 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKI 628
+AR E FY PHN+DFRGRAYP+ PY N +G D+CRG+L F +GR LG+ GL WLKI
Sbjct: 765 IARAYVGET-FYLPHNMDFRGRAYPLPPYFNQMGPDMCRGLLLFSKGRELGERGLRWLKI 823
Query: 629 HLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLA 688
H+AN+Y G DK +D R F +HLDD+ DSA K L G+RWWLEA DPFQCLAACI L
Sbjct: 824 HIANVY--GYDKASFDERAQFAMDHLDDVIDSAEKGLNGRRWWLEASDPFQCLAACIELK 881
Query: 689 EALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATR 748
AL P P +SH+P+HQDGSCNGLQHYAALG D +GA VNL D+P+D+YS +A
Sbjct: 882 NALACPDPTKYISHLPIHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVADH 941
Query: 749 VLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 808
V + + ++A N L A+ L ++V+RK+VKQTVMT+VYGVT++GA Q++++L
Sbjct: 942 VRQSIAQEAAAG-----NQL-AKILEDKVNRKIVKQTVMTNVYGVTFLGAIRQVQKQLNA 995
Query: 809 RCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ + G + Y + AL MF A I WLGDCA
Sbjct: 996 FFPELSERNVVGKCATYITRKIFAALSSMFTGAHEIQFWLGDCA 1039
>G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomium thermophilum
(strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0035550 PE=3 SV=1
Length = 1394
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/721 (34%), Positives = 381/721 (52%), Gaps = 67/721 (9%)
Query: 160 QIKMETEAWEDAAREYQELLEDMRKQKLAPNL--PYMKSLFLGWFEPLRNAIVAEQELCK 217
Q ++E + E A ++++E E + L P + P + S W + L I EQ +
Sbjct: 355 QSRLERDVLEAALQKWREDNESLASMGLNPQISAPSLSSKLYQWHQALERRIAEEQAKVE 414
Query: 218 DTRL----------RLTHGPYFNELPADMMAVITMHKLMGLLMTN--TNGVGSAKVVQGA 265
+ R +GP + A +A T+ ++ LL + GV ++ VQ
Sbjct: 415 ASENVPKKSAEDLDRCLYGPLLLQGSATRLAAATIISILSLLSLHGADKGVAASLAVQ-- 472
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
Q+ + E + R ++ EKTKK K +++L K
Sbjct: 473 -QVAKVAEEDIR-FQIAEKTKKLPK------HQTELQKRKARRLIRVKGNGSLKTTDKKQ 524
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDG 385
+ A I W + KVG+ L+ +++TA I + D
Sbjct: 525 LGVATLPLATTGEMAPAITENTR----WPTAIRAKVGALLLTAMMETAKIM----VVRDH 576
Query: 386 PP------DIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSAR-HMVIPYMPM 438
P ++PAF H ++ K+ G+I+ + + + L++ R ++ ++PM
Sbjct: 577 PVTKEKVHQLQPAFSHAMQ------LRKGKKVGIIQANPELVEILKREPRAELLARHLPM 630
Query: 439 LVPPNNWTGYDKGAYLFLPSYVMRI--HGAKQQ---RDAVKRAPVTQLNPVFEALNTLGS 493
LV P WT +DKG +L S ++R+ H +Q+ A++R + Q+ L+ LG
Sbjct: 631 LVEPEPWTKFDKGGFLECQSPLIRLKNHEIEQKIYAEAAIERGDMEQM---MRGLDVLGK 687
Query: 494 TKWRVNKRVLSVIDQIWAKGGGLADL-VDRKDVPLPEELDTEDEA-EIRKWKWSVKNVRK 551
T WR+N++V V+ +W +G A++ ++P+P E D+ D+ + R W VK ++
Sbjct: 688 TAWRINRKVFDVMLTVWNEGIAFANIPALHPNIPIPPEPDSSDDPMKKRIWMRQVKAIQN 747
Query: 552 ENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 611
E + HS RC + +L +AR D+ FY+PHNLDFRGRAYP+ PYLNH+G+D RG+L
Sbjct: 748 EKSGMHSVRCFMNFQLEIARAFIDQT-FYFPHNLDFRGRAYPLPPYLNHMGADHMRGMLL 806
Query: 612 FGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWW 671
F +G+PLG++GL WLKIHLAN+Y G DK D R F +++L +I DSA+ PL GKRWW
Sbjct: 807 FAKGKPLGENGLRWLKIHLANVY--GYDKASLDDREKFADDNLANIMDSASNPLGGKRWW 864
Query: 672 LEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVN 731
L+ EDP+QCLA C LA AL+SP P +SH+PVHQDG+CNGLQHYAALG D GA VN
Sbjct: 865 LQGEDPWQCLATCFELAAALQSPDPTQFVSHLPVHQDGTCNGLQHYAALGGDTWGAQQVN 924
Query: 732 LIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVY 791
LI G++PADVYS +A V E++ +DA + A+ L ++ RK+VKQTVMT+VY
Sbjct: 925 LIPGEKPADVYSAVAQLVQEMVTKDAAAGNE------FAKALDGKITRKVVKQTVMTNVY 978
Query: 792 GVTYIGARDQIKRRLKE---RCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLG 848
GVT++GA+ Q++++L + S Y A AL MF A +I WLG
Sbjct: 979 GVTFVGAKRQVQKQLDALYPNLESQTGCSTSILSSYMATKIFAALGTMFSGAYAIQSWLG 1038
Query: 849 D 849
+
Sbjct: 1039 E 1039
>M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_2299 PE=4 SV=1
Length = 1312
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 311/514 (60%), Gaps = 36/514 (7%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
W Q + +VGS L+ L+ A ++ A ++ G+ + +PAF + I K+
Sbjct: 575 WTQIIRARVGSYLVHQLLSVATVKRQAYDREGELWEEEQPAFYSAYEYIQ------GKKL 628
Query: 412 GVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQ 469
GVI + +V Q L+K S R + P ++PMLVPP W +D G Y + + MR + +Q
Sbjct: 629 GVIRLNEVVSQRLDKESVRETLHPRHLPMLVPPRPWLTHDSGGYFSVKTSAMRYKDSVEQ 688
Query: 470 RDAVKRAPVTQ-LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLP 528
++ A L V L+ LG+T W VN+ V V+ Q+W G LADL P
Sbjct: 689 SSYLRAASANNGLEVVLAGLDVLGNTAWNVNREVFDVVLQVWNSGEALADLP-------P 741
Query: 529 EELDTEDEAE-----IRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDEDGFY 580
E+ + I+ ++ +R+ N+ R HSQRCDI KL +AR E FY
Sbjct: 742 AEMTDPEPERPPPDDIKAKGIYLQRLRQWNSIRASNHSQRCDINYKLEIARSFLGEK-FY 800
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
+PHN+DFRGRAYP+ P+LNH+G+DLCRG+L+F E +PLG++GL WL IHLAN++ G DK
Sbjct: 801 FPHNMDFRGRAYPIPPHLNHIGNDLCRGLLKFAEAKPLGEAGLRWLHIHLANVW--GYDK 858
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALR-SPTPETT 699
+ R FT+ H D + DSA +PLEG+RWWL+A+DP+QCLA CI L +A + PE
Sbjct: 859 ASFAEREEFTKRHADLVKDSATRPLEGERWWLQADDPWQCLATCIELNKAWNYADGPEAF 918
Query: 700 MSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEK 759
S +PVHQDG+CNGLQHYAALG D GA VNL GGD+PADVY+G+A V+E + + AE
Sbjct: 919 PSQLPVHQDGTCNGLQHYAALGGDLQGAKQVNLRGGDRPADVYTGVAELVIEQLSKRAEA 978
Query: 760 DPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLF 819
+T A+ L +V RK+VKQTVMT+VYGVT+IGA++Q+ R+L +R + + +L+
Sbjct: 979 GDET------AQLLCGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE-ELW 1031
Query: 820 GASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
A+ Y AK + + +F A I WL A++
Sbjct: 1032 SAASYLAKVIMDCIGNLFSGANLIQDWLTVSARL 1065
>L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_02315 PE=3 SV=1
Length = 1438
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 258/733 (35%), Positives = 372/733 (50%), Gaps = 81/733 (11%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSL---FLGWFEPLRNAI------ 209
RQIK+E ++ A +++ + K L +L KSL W E L +
Sbjct: 362 RQIKLEEDSIISAVDRWRKESASLSKMGLDTSL-QTKSLGARMWKWQEALEQRLNQELQS 420
Query: 210 ------VAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTN--TNGVGSAKV 261
E+E + R +GP+ LP D +A +T+ M L ++ G+ A V
Sbjct: 421 IDKAEATPEKEKSQLDVERCIYGPFLRYLPTDKLAAVTILTSMQCLSSHGTDKGMPLASV 480
Query: 262 VQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXX 321
+ IG +E E+ E + T K+G
Sbjct: 481 IMS---IGANLEDES----ITETIRNNT--------------TKQGWQQLNKSASAGKGL 519
Query: 322 XXXXXXXXXXXXXQKNQQALGIVRG--------RDDWKP-WGQEAQVKVGSCLMQLLIDT 372
Q +VRG D W W + KVGS L+ LIDT
Sbjct: 520 GLARVIKNKRTRQQLTDSLAKLVRGDSAAKHDLSDQWNTEWSATIKAKVGSYLLSALIDT 579
Query: 373 AYIQPPA--NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARH 430
A + + + I+PAF HT K+ G+I + + L++ H
Sbjct: 580 AKVPVTMENTKTQELLTQIQPAFSHT------HQYKIGKKTGMILANRALVASLKREPVH 633
Query: 431 -MVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGA-KQQRD----AVKRAPVTQLNPV 484
++ ++PM+ P W+ +++G ++ P+ +RI G K QR A++R + Q+
Sbjct: 634 SLLAKHLPMVAEPEPWSEFNQGGFISHPAKAVRIKGGDKNQRQYQEAAIRRGDMEQM--- 690
Query: 485 FEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRK---DVPLPEELDTEDEAEIRK 541
F+ L+ LG T W +N+ V + + W G +A+ + + P PE ++D E RK
Sbjct: 691 FKGLDVLGKTSWVINRPVFDTMLEAWNTGEAIANFPAEEPKLEYP-PEPPASKDPTERRK 749
Query: 542 WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHL 601
W S+K + + HS RC +L +AR +++E FY+PHNLDFRGRAYP+ PYLNH+
Sbjct: 750 WIRSLKTIENTRSGFHSARCFQNFQLEIARSLREEK-FYFPHNLDFRGRAYPIPPYLNHM 808
Query: 602 GSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSA 661
G+D CRG+L+FG+GR LG++GL WL++HLAN++ G DK R +T +H+DDI+DSA
Sbjct: 809 GADHCRGLLKFGKGRELGEAGLKWLRVHLANIH--GHDKASLKEREQYTVDHIDDIYDSA 866
Query: 662 NKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALG 721
PL G+RWWL+AEDP+QCLAAC+ L AL S P +SH+PVHQDG+CNGLQHYAALG
Sbjct: 867 MNPLNGRRWWLDAEDPWQCLAACLELKNALDSGDPTKFVSHLPVHQDGTCNGLQHYAALG 926
Query: 722 RDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKL 781
D+ GA VNL GD+PADVY+ +A V E M D + K A L ++ RK+
Sbjct: 927 GDEWGARQVNLEPGDRPADVYNAVAELVNEKMAVDRKNGNKC------AIWLEGKIKRKV 980
Query: 782 VKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASC---YAAKTTLTALQEMFE 838
VKQTVMT+VYGVTYIGA+ Q++++L + F S Y A AL MF
Sbjct: 981 VKQTVMTNVYGVTYIGAQAQVRKQLVAAHTDLPNEGSFNVSLLSGYVATKIFEALGTMFR 1040
Query: 839 AARSIMGWLGDCA 851
A I WLG+CA
Sbjct: 1041 GAHDIQFWLGECA 1053
>Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) OS=Stygamoeba
sp. ruffled GN=mtRNAP PE=3 SV=1
Length = 661
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/468 (44%), Positives = 286/468 (61%), Gaps = 27/468 (5%)
Query: 392 AFKHTLKNISTDSQNGSKRYGVIECDSLVQQG-----LEKSARHMVIPYMPMLVPPNNWT 446
AFKHT + ++ G I C V Q L + A H + +PM+VPP WT
Sbjct: 55 AFKHTY------TYTTKRKVGAITCAPSVLQTIRDGHLAQEANHARM--LPMVVPPKPWT 106
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
D G YL + S VMR+ ++ Q D + + T L+ V+ +L+ L + W++NKRVL V
Sbjct: 107 APDVGGYLVVKSNVMRVRDSRLQWDMLSKTG-TDLSNVYRSLDELSAVPWKINKRVLRVA 165
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTE---DEAEIRKWKWSVKNVRKENNERHSQRCDI 563
++W +GGG+ DL R D+PLPE D D AE + ++ ++ N + HS RCD
Sbjct: 166 QELWQRGGGIGDLPSRTDLPLPEAPDNYKDMDPAERSAYYRHLRRQQRANADLHSLRCDT 225
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
LKL VA + ++ D FY+PHN+DFRGR YP+ P+LNHLGSDLCRG+L F EGR LG +GL
Sbjct: 226 TLKLGVAEQFQNLDRFYFPHNMDFRGRTYPIPPHLNHLGSDLCRGLLCFSEGRELGPNGL 285
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLK+ LANL+ G +K + R F + ++ + +A P + WW A+DP+Q L+
Sbjct: 286 GWLKVQLANLF--GNNKCSFADRQRFADENMARVLATAADP-ATETWWHAADDPWQALST 342
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
C L +AL SP P +S++P+H DGSCNGLQHYAALG D+ GA VNL+ QP DVYS
Sbjct: 343 CYELTDALASPDPARHVSYLPIHMDGSCNGLQHYAALGGDEEGARKVNLLPAPQPDDVYS 402
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
G+AT V ++ DA+K A L +++ R++VKQTVMTSVYGVTY+GAR QI+
Sbjct: 403 GVATIVSRLVEEDAQKGHSI------ALLLRDRISRRIVKQTVMTSVYGVTYVGARAQIQ 456
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
L ++DDA + AS Y A TL A++EMF AR IM WL CA
Sbjct: 457 NALSSTDLLDDDAA-WQASRYLAAHTLEAVREMFVGAREIMAWLATCA 503
>M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_02746 PE=4 SV=1
Length = 1259
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/504 (43%), Positives = 296/504 (58%), Gaps = 20/504 (3%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYG 412
W + K+GS L+ +L+ A I + PAF HT + Q G ++ G
Sbjct: 494 WPVTVKAKIGSILVSILMHVAKIDVITETENENISQKTPAFYHTYQ-----YQKG-RKLG 547
Query: 413 VIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQR 470
VI+ D L++Q + R + P +PMLV P W +D G Y S VMR + +Q
Sbjct: 548 VIKLNDQLMKQLGSQPLRGNIHPRLLPMLVEPKPWISWDSGGYYLSKSIVMRSRDSPEQI 607
Query: 471 DAVKRAPV-TQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD-RKDVPLP 528
+ +K A L +FE L+ LGST W +N+ V V+ ++W G A++ D+ P
Sbjct: 608 NYLKTASERNNLKSIFEGLDVLGSTAWAINRPVFDVVSEVWNSGQEFAEIPPVNSDITFP 667
Query: 529 EELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFR 588
+ ++D E W+ K + ++ + S RCDI KL +AR E Y+PHNLDFR
Sbjct: 668 PQPTSKDPGERISWQVLCKQIARDAQNKQSIRCDINYKLEIARAFLHEK-MYFPHNLDFR 726
Query: 589 GRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIA 648
GRAYP+ P+ NHLG+DLCRG+L F E + +G+SGL WLKIHLAN+ G DK + R A
Sbjct: 727 GRAYPIPPHFNHLGNDLCRGLLTFHEAKEIGESGLRWLKIHLANV--CGFDKESFIEREA 784
Query: 649 FTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQD 708
FT +L +IFDSA+ PL+G RWWL +DP+Q LAAC L ALRSP P S +PVHQD
Sbjct: 785 FTTENLKNIFDSADNPLKGSRWWLTFDDPWQTLAACFELTAALRSPDPYKFKSRLPVHQD 844
Query: 709 GSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNAL 768
G+CNGLQHYAALG D LGA VNL ++P DVY+ +A V E +++DA++ N L
Sbjct: 845 GTCNGLQHYAALGGDILGARQVNLEPSNRPYDVYTKVAELVNEQLQKDAKEG-----NHL 899
Query: 769 HARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKT 828
A L ++ RK+VKQTVMT+VYGVTY+GAR+QI +LK + + LF + Y AKT
Sbjct: 900 -AVLLQGKITRKIVKQTVMTNVYGVTYVGARNQILNQLKNINDLPRE-MLFNLASYLAKT 957
Query: 829 TLTALQEMFEAARSIMGWLGDCAK 852
+L+ MF A I WL + AK
Sbjct: 958 VFFSLKSMFTGAHKIQEWLNEAAK 981
>E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorella variabilis
GN=CHLNCDRAFT_27382 PE=3 SV=1
Length = 599
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/438 (45%), Positives = 272/438 (62%), Gaps = 22/438 (5%)
Query: 435 YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVK---------RAPVTQLNPVF 485
Y+PML+PP W + G +L L + VMRI G++ Q++ + R P L+ V+
Sbjct: 9 YLPMLIPPVPWLRNNLGGHLTLRNTVMRIRGSRLQQEMLDAADQEWGEGRGP--GLSRVY 66
Query: 486 EALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDT----------ED 535
+ALN+LGST W +N+ V V++ +WA GGG+ D+ + ++PLP +L +
Sbjct: 67 DALNSLGSTAWAINQDVFRVVETVWAWGGGVCDIPPKVNLPLPRDLKPGFRQHRHAPGQL 126
Query: 536 EAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 595
+ +R + + ++K+N E HS RCD+E KLA+AR+ E FY+PHN+DFRGRAYPMH
Sbjct: 127 QFYLRTRRADISRMQKKNRELHSLRCDMEYKLAIAREFVKEPRFYFPHNVDFRGRAYPMH 186
Query: 596 PYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLD 655
P+LNHLG+DL RG+L+F EGRPLG+ GL WL + ANL+ GVDKL GR+ + E+HL
Sbjct: 187 PHLNHLGADLSRGLLQFAEGRPLGEHGLFWLYVQAANLWGQGVDKLPLWGRVKWVEDHLA 246
Query: 656 DIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQ 715
I + +W +AE+PFQ L+ C + +A S P +SH+PVHQDGSCNGLQ
Sbjct: 247 QILMTTRGSHGQVAYWWQAENPFQFLSTCFEIHKANASGDPARFVSHVPVHQDGSCNGLQ 306
Query: 716 HYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLIN 775
HYAALGRD G AVNL D+P R + A P P+ L L
Sbjct: 307 HYAALGRDFSGGHAVNLCPTDRPQAGGGARKPRTPDRACIHASNQPSNQPDLLMCHTLCA 366
Query: 776 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQE 835
+DRKLVKQTVMTSVYGVT++GAR Q+ RLKER ED+ ++ SCY AK TL L E
Sbjct: 367 GLDRKLVKQTVMTSVYGVTFVGARAQVGNRLKER-GFEDNQFMYKVSCYTAKVTLECLHE 425
Query: 836 MFEAARSIMGWLGDCAKV 853
MF++A+ M WL +CA++
Sbjct: 426 MFQSAKHTMHWLSECARL 443
>H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytophthora ramorum
PE=3 SV=1
Length = 999
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 269/785 (34%), Positives = 373/785 (47%), Gaps = 146/785 (18%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKD 218
RQ+++E +E A +Y E +R+ + K L W + AEQ+ K
Sbjct: 111 RQLRLECSVYEMAMDKYSSSHEKVRQLGRSTETNAAKELIRKWMPQTEKYVDAEQKKIKA 170
Query: 219 TRLRL---THGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHE 275
+ +GP L D++A M+ ++ + + G K ++ A +G+A++ E
Sbjct: 171 GKHSTDSNIYGPALMLLKPDVLAATGMNIMLNMCLMEAKG---PKFIKLALAMGKAVQEE 227
Query: 276 ARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 335
T+K+ A N G++D
Sbjct: 228 I-------ITRKEAMAKRN-NGDAD------------------KFYLNATEYIKLESLKT 261
Query: 336 KNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGD----------G 385
+ + + V G W + Q+KVG+ ++ + T Y+ N+ GD G
Sbjct: 262 RMKDYIDTVGG------WDKRLQLKVGAAVVDCIQRTCYV---PNEFGDVSTPELCAAKG 312
Query: 386 PPDIRPAFKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP----YMPMLV 440
P PAF H N D ++R GVI+ + L S V+P Y+PMLV
Sbjct: 313 LPAPEPAFIH---NYVFDR---NRRAGVIQIHQKMADTVLATSPDANVLPWTARYLPMLV 366
Query: 441 PPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNK 500
PP W G G YL L + +MR + Q D V+R + + ALN + W +NK
Sbjct: 367 PPRPWDGIVNGGYLKLRTKIMRQRDSAWQMDCVQRG---DMGGILTALNLMADVPWVINK 423
Query: 501 RVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKE-------- 552
VL+V+ Q+W GG DL R DVPLP+ E + + + KNVRK
Sbjct: 424 EVLNVVLQVWEDGGNFGDLPTRTDVPLPDPESPEFKEDPALY---YKNVRKNQAHMMTPY 480
Query: 553 -----------------------NNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRG 589
N E HS RCD KL VA + KDE YYP+N+DFRG
Sbjct: 481 VMWVQTACKSKRLLLGGWWIEQLNREFHSLRCDTLYKLQVAEEFKDEPALYYPYNMDFRG 540
Query: 590 RAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAF 649
R YP+ P LNHLGSDL R +L F + +PLG+ GL W+KIHLAN++ GVDK +D R+ F
Sbjct: 541 RVYPIPPNLNHLGSDLSRSLLIFRDRKPLGEHGLRWMKIHLANVF--GVDKCSFDERVVF 598
Query: 650 TENHLDDIFDSANKPL-EGKR-WWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQ 707
+ HLD + SA+ PL EG WW A+ PF L C L A+ SP P S++P+HQ
Sbjct: 599 ADAHLDKVMASASDPLGEGDSAWWKGADYPFLALGVCFELKRAIESPDPTQYESNIPIHQ 658
Query: 708 DGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD------- 760
DGSCNGLQHYAALGRD+ G VNL+ +P+DVY G+AT+V+ + DAE D
Sbjct: 659 DGSCNGLQHYAALGRDRRGGEQVNLVPAPRPSDVYMGVATQVMAKVEHDAEVDLPSVEEV 718
Query: 761 -------PKTNPN-----ALHARNLINQ-------------VDRKLVKQTVMTSVYGVTY 795
P N R L++Q + RK+VKQTVMTSVYGVTY
Sbjct: 719 RAMIADVPDDNSQESLSRKTKLRTLLDQAQRKKNAQFLHGIITRKVVKQTVMTSVYGVTY 778
Query: 796 IGARDQIKRRLKERC---------AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGW 846
IGAR QI RL E +EDD ++ ASCY A+ T+ ++ ++F +ARSIM W
Sbjct: 779 IGARKQISARLHETFLTKGHIMDEKLEDD--IYHASCYCAELTMGSMGDLFNSARSIMAW 836
Query: 847 LGDCA 851
L CA
Sbjct: 837 LAKCA 841
>A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassezia globosa (strain
ATCC MYA-4612 / CBS 7966) GN=MGL_3857 PE=3 SV=1
Length = 1358
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 307/514 (59%), Gaps = 36/514 (7%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
W Q + +VGS L+Q L+D A + A ++ G+ + +PAF + I K+
Sbjct: 586 WTQIIRARVGSFLVQHLLDVATVHRKAYDRDGELWEEDQPAFYSAYEYIQ------GKKL 639
Query: 412 GVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQ 469
GVI + +V Q L+K S R + P ++PMLVPP W +D G Y + + MR + +Q
Sbjct: 640 GVIRLNEVVSQRLDKESVRETLHPRHLPMLVPPRPWLSHDSGGYYSMKTSAMRYKDSVEQ 699
Query: 470 RDAVKRAPVTQ-LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLP 528
++ A L V L+ LG+T W VNK V V+ QIW G L DL P
Sbjct: 700 SSYLRAASENHGLEVVLAGLDVLGNTAWNVNKEVFDVVLQIWNSGEALGDLP-------P 752
Query: 529 EELDTEDEAE-----IRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDEDGFY 580
E+ + I+ ++ +R+ N R HSQRCDI KL +AR +E FY
Sbjct: 753 AEMTDPEPERPPPDDIKAKGIYLQRLRQWNTIRSSNHSQRCDINYKLEIARSFLNER-FY 811
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
+PHN+DFRGRAYP+ P+LNH+G+DLCRG+L+F E +PLG+ GL WL+IHLAN++ G DK
Sbjct: 812 FPHNMDFRGRAYPIPPHLNHIGNDLCRGLLKFAEAKPLGEKGLRWLRIHLANVW--GYDK 869
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT-PETT 699
+ R FT +H DI DSA GKRWWL+A+DP+QCLA CI L +A P PE
Sbjct: 870 ASFAEREQFTIDHEADIRDSATNAYHGKRWWLQADDPWQCLATCIELTKAWDYPDGPEAF 929
Query: 700 MSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEK 759
S +PVHQDG+CNGLQHYAALG D GA VNL GGD+PADVY+G+A V+E + R AE+
Sbjct: 930 PSQLPVHQDGTCNGLQHYAALGGDLQGAKQVNLRGGDRPADVYTGVAELVIEQLNRRAEE 989
Query: 760 DPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLF 819
T A+ L +V RK+VKQTVMT+VYGVT+IGA++Q+ R+L +R + +++
Sbjct: 990 GDPT------AQLLRGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLVDRGDTPAE-EVW 1042
Query: 820 GASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
A+ Y AK + + ++F A I WL A++
Sbjct: 1043 TAASYLAKVIMDCIGDLFSGANMIQDWLTITARM 1076
>G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavia heterothallica
(strain ATCC 42464 / BCRC 31852 / DSM 1799)
GN=MYCTH_2310823 PE=3 SV=1
Length = 1402
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/720 (34%), Positives = 376/720 (52%), Gaps = 67/720 (9%)
Query: 160 QIKMETEAWEDAAREYQELLEDMRKQKLAPNL--PYMKSLFLGWFEPLRNAIVAEQ---- 213
Q ++E + + A ++E E + L L P + S W + L ++ EQ
Sbjct: 363 QARLERDCVDAAIARWREENEQLMSMGLNTQLSTPSLNSKLYDWHQALEARLIQEQAKVE 422
Query: 214 ------ELCKDTRLRLTHGPYFNELPAD-MMAVITMHKLMGLLMTNTN-GVGSAKVVQGA 265
++ R +GP+ + PA+ + AV + L L M + G+ + +VQ
Sbjct: 423 ASLSAPRKSREDMERCVYGPHLLQSPANRLAAVAILSALSSLAMHGADKGIPVSNMVQQL 482
Query: 266 SQIGEAIEHEARIYRFMEKTK-KKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXX 324
++I E I + + K+K +K K+ D AP
Sbjct: 483 AKIAEEDIRAQAIAKNLPKSKPRKQKSARQLMRLHDAAPTATTKSSPTATASPASQPATN 542
Query: 325 XXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYI--QPPANQI 382
W + K G+ ++ L+DTA I + +
Sbjct: 543 SEPSEFASR-------------------WPIAIKAKFGAVILGALMDTAKIVVEREHPET 583
Query: 383 GDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIP-YMPMLVP 441
+ ++PAF HT++ +R GVI+ + + + +++ R + ++PM+V
Sbjct: 584 KEKVTQVQPAFTHTVQ------LKKGRRVGVIQPNRSLIELMKREPRGEALARHLPMVVE 637
Query: 442 PNNWTGYDKGAYLFLPSYVMRIHG-AKQQR----DAVKRAPVTQLNPVFEALNTLGSTKW 496
P W+ +DKG ++ PS ++R+ K QR A++R + Q+ L+ LG T W
Sbjct: 638 PEPWSKFDKGGFITSPSPLVRLKNHEKDQRIYAEAAIERGDMEQM---MRGLDVLGKTAW 694
Query: 497 RVNKRVLSVIDQIWAKGGGLADL--VDRKDVPLPEELD-TEDEAEIRKWKWSVKNVRKEN 553
++N+ V V+ + W G A+L +D K +P+P E D T+D + R W +VK E
Sbjct: 695 KINRPVFDVMLEAWNTGEEFANLPALDPK-IPIPPEPDSTDDPMKRRLWLRAVKAAENEK 753
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
+ HS RC + +L +AR +D+ FY+PHN+DFRGRAYP+ YLNH+G+D RG+L F
Sbjct: 754 SGLHSVRCFMNFQLEIARAFRDQT-FYFPHNIDFRGRAYPIPTYLNHMGADNMRGLLLFA 812
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
+GRPLGKSGL WLK+HL+N+Y G DK R F + +L++IFDSA+ PL GKRWWL+
Sbjct: 813 KGRPLGKSGLAWLKVHLSNVY--GFDKASLKEREEFADRNLENIFDSADNPLTGKRWWLQ 870
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
AEDP+QCLA C L AL SP P +SH+PVHQDG+CNGLQHYAALG D GA VNL+
Sbjct: 871 AEDPWQCLATCFELKAALSSPDPTAYVSHLPVHQDGTCNGLQHYAALGGDTWGAQQVNLL 930
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
GD+PADVYS +A E++++ +D N N A+ + ++ RK+VKQTVMT+VYGV
Sbjct: 931 PGDRPADVYSAVA----ELVQKQVTED-LANGNEF-AQAMDGKITRKVVKQTVMTNVYGV 984
Query: 794 TYIGARDQIKRRLKERCA-IEDDAQLFGA--SCYAAKTTLTALQEMFEAARSIMGWLGDC 850
T++GA+ Q++++L IE + L + Y A AL MF A I WLG+
Sbjct: 985 TFVGAKKQVQKQLDSLYPDIEKETGLSSGVLASYIAAKVFMALSTMFRGAHDIQNWLGEI 1044
>F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430
/ Wegner 21-1) GN=PP7435_Chr1-0797 PE=3 SV=1
Length = 1329
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 255/733 (34%), Positives = 370/733 (50%), Gaps = 78/733 (10%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAIVAEQEL 215
+RQ +E ++ + A R++++ LED ++ + N+P +K+ W L I E
Sbjct: 368 ERQRLLEFQSLDGAKRKWEQTLEDFKESNVV-NVPSKSIKNYLWKWHSKLLPLIKEEVLK 426
Query: 216 CKDT------------------------RLRLTHGPYFNELPADMMAVITMHKLMGLLMT 251
C+ T RL + Y + D M+ +T+ +L+ ++ T
Sbjct: 427 CQKTLSIIGAGNLNSYKTKLSTMERKAFNERLEYANYLILVSPDKMSTLTILELLKIIFT 486
Query: 252 --NTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXX 309
NT G+ +A+ V +G+A+E E R R + K K N + + +
Sbjct: 487 GKNTTGIRTARAVIS---VGKAVELEYRSERLLSKEIDVFKNFRNMKNSKEFKRL----- 538
Query: 310 XXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLL 369
Q+++ A + W E + K+GS L+ LL
Sbjct: 539 ------------VTTGSKNTFTKLLQQSRSASIDTELEETLFNWPNEIKAKIGSVLISLL 586
Query: 370 IDTAYIQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGL 424
+ +A I P N+ G PA H + NG+K G+++ L
Sbjct: 587 LQSAKIDVQGKDPITNEEVHGQV---PAIFHQYQ-----YANGNK-IGILKFHHDFTSKL 637
Query: 425 EKSARHMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ-L 481
K + Y+PMLV P W ++ G Y + + ++R + +Q VK A +
Sbjct: 638 SKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTKDSPEQLAYVKAASENNTI 697
Query: 482 NPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPL--PEELDTEDEAEI 539
+ V++ L LG+T W +N + +VI ++W G D+ +D P+ P+ D + I
Sbjct: 698 DKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQDSPIYPPQPPSDADPSVI 757
Query: 540 RKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLN 599
R WK+ V+ V + + S RCD KL AR E Y+PHNLDFRGRAYP+ P+LN
Sbjct: 758 RDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGE-RIYFPHNLDFRGRAYPISPHLN 816
Query: 600 HLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFD 659
HLG+D+ RG+L F EG+ LG+ GL WLKIHLANLY G+DK D R FT+ + +I D
Sbjct: 817 HLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKETLDKREQFTDLNKANIID 874
Query: 660 SANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAA 719
SA KPL GK WW +E P+Q L+ CI LAEA + P +SH+PVHQDG+CNGLQHYAA
Sbjct: 875 SATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVSHIPVHQDGTCNGLQHYAA 934
Query: 720 LGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDR 779
LG D GA VNL+ ++P DVYS +A V + + DA TN + L A L + R
Sbjct: 935 LGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDA-----TNGHQL-ALKLQRHIKR 988
Query: 780 KLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEA 839
K+VKQTVMTSVYGVTYIGA DQI RRLKE +DD A Y A ++++E+F
Sbjct: 989 KVVKQTVMTSVYGVTYIGASDQIDRRLKEIFG-DDDPDTHVAGRYLALQVFSSIRELFTG 1047
Query: 840 ARSIMGWLGDCAK 852
A I WL + +K
Sbjct: 1048 AHQIQDWLAEASK 1060
>C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr1-4_0022 PE=3 SV=1
Length = 1321
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 255/733 (34%), Positives = 370/733 (50%), Gaps = 78/733 (10%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAIVAEQEL 215
+RQ +E ++ + A R++++ LED ++ + N+P +K+ W L I E
Sbjct: 360 ERQRLLEFQSLDGAKRKWEQTLEDFKESNVV-NVPSKSIKNYLWKWHSKLLPLIKEEVLK 418
Query: 216 CKDT------------------------RLRLTHGPYFNELPADMMAVITMHKLMGLLMT 251
C+ T RL + Y + D M+ +T+ +L+ ++ T
Sbjct: 419 CQKTLSIIGAGNLNSYKTKLSTMERKAFNERLEYANYLILVSPDKMSTLTILELLKIIFT 478
Query: 252 --NTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXX 309
NT G+ +A+ V +G+A+E E R R + K K N + + +
Sbjct: 479 GKNTTGIRTARAVIS---VGKAVELEYRSERLLSKEIDVFKNFRNMKNSKEFKRL----- 530
Query: 310 XXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLL 369
Q+++ A + W E + K+GS L+ LL
Sbjct: 531 ------------VTTGSKNTFTKLLQQSRSASIDTELEETLFNWPNEIKAKIGSVLISLL 578
Query: 370 IDTAYIQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGL 424
+ +A I P N+ G PA H + NG+K G+++ L
Sbjct: 579 LQSAKIDVQGKDPITNEEVHGQV---PAIFHQYQ-----YANGNK-IGILKFHHDFTSKL 629
Query: 425 EKSARHMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ-L 481
K + Y+PMLV P W ++ G Y + + ++R + +Q VK A +
Sbjct: 630 SKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTKDSPEQLAYVKAASENNTI 689
Query: 482 NPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPL--PEELDTEDEAEI 539
+ V++ L LG+T W +N + +VI ++W G D+ +D P+ P+ D + I
Sbjct: 690 DKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQDSPIYPPQPPSDADPSVI 749
Query: 540 RKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLN 599
R WK+ V+ V + + S RCD KL AR E Y+PHNLDFRGRAYP+ P+LN
Sbjct: 750 RDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGE-RIYFPHNLDFRGRAYPISPHLN 808
Query: 600 HLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFD 659
HLG+D+ RG+L F EG+ LG+ GL WLKIHLANLY G+DK D R FT+ + +I D
Sbjct: 809 HLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKETLDKREQFTDLNKANIID 866
Query: 660 SANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAA 719
SA KPL GK WW +E P+Q L+ CI LAEA + P +SH+PVHQDG+CNGLQHYAA
Sbjct: 867 SATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVSHIPVHQDGTCNGLQHYAA 926
Query: 720 LGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDR 779
LG D GA VNL+ ++P DVYS +A V + + DA TN + L A L + R
Sbjct: 927 LGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDA-----TNGHQL-ALKLQRHIKR 980
Query: 780 KLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEA 839
K+VKQTVMTSVYGVTYIGA DQI RRLKE +DD A Y A ++++E+F
Sbjct: 981 KVVKQTVMTSVYGVTYIGASDQIDRRLKEIFG-DDDPDTHVAGRYLALQVFSSIRELFTG 1039
Query: 840 ARSIMGWLGDCAK 852
A I WL + +K
Sbjct: 1040 AHQIQDWLAEASK 1052
>D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytophthora infestans
(strain T30-4) GN=PITG_10289 PE=3 SV=1
Length = 1070
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 269/800 (33%), Positives = 386/800 (48%), Gaps = 159/800 (19%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK- 217
RQ+++E +E A +Y + +R+ + + K L W + I +EQ+ K
Sbjct: 165 RQLRLECSVYEMAMDKYSASHDKVRQLGRSTSTNAAKDLITKWMPQAQKYIESEQKKIKS 224
Query: 218 -----DTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
D+ + +GP L D++A I M+ ++ + + + G K ++ A +G+A+
Sbjct: 225 GTHSTDSNI---YGPALMLLRHDILAAIGMNIMLNMCLMESKG---PKFIKLALAMGKAV 278
Query: 273 EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXX 332
+ E +KK+T + + + V K
Sbjct: 279 QEEI-------ISKKETISKRYQDDDKFYLQVSKNIKLESLK------------------ 313
Query: 333 XXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYI-------QPPANQIGDG 385
+ ++ + V G W + Q+KVG+ ++ + T Y+ P G
Sbjct: 314 --MRMKEYVDSVGG------WDKRLQLKVGAAVVDCIQRTCYVPNEYGEVSTPELCAAKG 365
Query: 386 PPDIRPAFKHTLKNISTDSQNGSKRYGVIE-----CDSLVQQGLEKSARHMVIPYMPMLV 440
P PAF H N D ++R GVI+ D+++ + + Y+PMLV
Sbjct: 366 LPPPEPAFIH---NYVFDR---NRRAGVIQIHQRMADTVLATNPDANVLPWTARYLPMLV 419
Query: 441 PPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNK 500
PP WT G YL L + +MR + Q D V+R +++ + +ALN + W +NK
Sbjct: 420 PPRPWTSVINGGYLKLRTKIMRQRDSAWQMDCVQRG---EMDGILKALNLMAEVPWVINK 476
Query: 501 RVLSVIDQIWAKGGGLADLVDRKDVPLPEELDTE---DEA-------------------- 537
VL V+ QIW GG DL R DVPLP+ E D A
Sbjct: 477 EVLDVVLQIWEDGGNFGDLPTRTDVPLPDPDSPEFADDPALYHKNVRKNQAHMMTISTSC 536
Query: 538 -------------EIRKW------------KWSVKNVRKENNERHSQRCDIELKLAVARK 572
E+ W +WS+ + + N E HS RCD KL VA +
Sbjct: 537 GFKLIATVSGHCLEVVGWIFLSLEPSERLLRWSL--IEQLNREFHSLRCDTLYKLQVAEE 594
Query: 573 MKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLAN 632
KDE YYP+N+DFRGR YP+ P LNHLGSDL R +L F + +PLG+ GL W+KIHLAN
Sbjct: 595 FKDEPELYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGERGLRWMKIHLAN 654
Query: 633 LYAGGVDKLCYDGRIAFTENHLDDIFDSANKPL-EGK-RWWLEAEDPFQCLAACINLAEA 690
++ GVDK +D R+ F + HLD + SA+ PL EG WW A+ PF L C L A
Sbjct: 655 VF--GVDKCSFDERVEFADAHLDKVVASASDPLGEGDCAWWKGADYPFLALGVCFELKRA 712
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
+ SP P MS++P+HQDGSCNGLQHYAALGRD G A VNL+ D+P+DVY G+AT+V+
Sbjct: 713 IESPDPTQYMSNIPIHQDGSCNGLQHYAALGRDHSGGAQVNLVPADRPSDVYMGVATQVM 772
Query: 751 EIMRRDAEKDPKT--NPNALHA-----------------RNLINQ-------------VD 778
+ RDA + T A+ A R L++Q +
Sbjct: 773 AKVERDAALEVPTVEEVRAMLAAVPDDESTESLSRRTKFRTLLDQAHRKKYAQFLDGIIT 832
Query: 779 RKLVKQTVMTSVYGVTYIGARDQIKRRLKE----RCAIEDDA---QLFGASCYAAKTTLT 831
RK+VKQTVMTSVYGVTYIGAR QI RL E + I DD ++ ASCY A+ T+
Sbjct: 833 RKVVKQTVMTSVYGVTYIGARKQISARLHETFLTKGHIMDDKLEDNIYHASCYCAELTMG 892
Query: 832 ALQEMFEAARSIMGWLGDCA 851
++ ++F +AR IMGWL CA
Sbjct: 893 SMGDLFTSARGIMGWLARCA 912
>C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinocarpus reesii
(strain UAMH 1704) GN=UREG_00348 PE=3 SV=1
Length = 1231
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 294/508 (57%), Gaps = 26/508 (5%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYI-----QPPANQIGDGPPDIRPAFKHTLKNISTDSQNG 407
W + K+G+ L +L + + P ++ +PAF+H + + G
Sbjct: 397 WSAATEAKIGALLASMLFSSTKVPVEHKNPETREVTVSK---QPAFRHVYQ-----LEKG 448
Query: 408 SKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH--G 465
V DS+V++ + A H++ ++PM+ PP W+ Y G +L PS V+R
Sbjct: 449 FSIGYVQLHDSIVEKLGREPASHLLAKHLPMVSPPAPWSSYHHGGFLEQPSLVIRARPDN 508
Query: 466 AKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL-VDRKD 524
A Q + + L+ +F LN LG T W++N+ V V+ + W G LAD+ +
Sbjct: 509 ALQLQYVKAASRRGDLDEIFAGLNVLGKTGWQINRPVFDVMLEAWNSGKELADIPAAEPN 568
Query: 525 VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
+P PE+ DT D ++ + + V + + HSQRC L+L VAR E FY PHN
Sbjct: 569 LPEPEKPDTGDSGSLKAYYRAKAVVDNKRSGFHSQRCFQNLQLEVARAYIGET-FYLPHN 627
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
+DFRGRAYP+ PY N +GSD+CRG+L F EGR LG+ GL WLKIHLAN+Y G DK +D
Sbjct: 628 MDFRGRAYPLPPYFNQMGSDMCRGLLLFSEGRQLGERGLKWLKIHLANVY--GFDKASFD 685
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R F+ +HLDD+ DSA K L G+RWWL+A DPFQCLAACI L AL P +SH+P
Sbjct: 686 ERAQFSMDHLDDVIDSAEKGLHGRRWWLQAADPFQCLAACIELKNALACADPTKFVSHLP 745
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
+HQDGSCNGLQHYAALG D +GA VNL D+P+D+YS +A V + + +DA +
Sbjct: 746 IHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVAEHVHQSIVQDAASGSQL- 804
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA-IEDDAQLFGASC 823
L ++++RK+VKQTVMT+VYGVT++GA Q++++L E + ++ + +
Sbjct: 805 -----GELLKDKINRKVVKQTVMTNVYGVTFLGAIRQVQKQLDEIYPDLAENNNVNKIAT 859
Query: 824 YAAKTTLTALQEMFEAARSIMGWLGDCA 851
Y + AL MF A I WLGDCA
Sbjct: 860 YITRKIFAALSSMFTGAHEIQFWLGDCA 887
>I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_12740 PE=3 SV=1
Length = 1536
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/529 (41%), Positives = 324/529 (61%), Gaps = 31/529 (5%)
Query: 335 QKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPA-NQIGDGPPDIRPAF 393
QK Q+ G++ W Q + +VGS L+Q L+ A + A ++ G + +PAF
Sbjct: 688 QKQQEEEGVL---SSIPKWTQAVRARVGSYLVQHLMHVANVSRKATDRDGVLWEEDQPAF 744
Query: 394 KHTLKNISTDSQNGSKRYGVIECDSLVQQGLEK-SARHMVIP-YMPMLVPPNNWTGYDKG 451
T + + G K+ GVI+ + ++ Q L+K S + + P ++PMLVPP WT +D G
Sbjct: 745 YSTYQYL------GGKKLGVIKLNEVIAQRLDKDSMQETLHPRHLPMLVPPKPWTSHDSG 798
Query: 452 AYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
Y + MR + +Q ++ A T ++ + AL+ LG+T W++NK + V+ +IW
Sbjct: 799 GYYSVRQSAMRYKDSAEQGSYLRAASDTGDVDTILAALDVLGNTSWKINKPIFDVMLEIW 858
Query: 511 AKGGGLADL--VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNE---RHSQRCDIEL 565
G A + VD + P P++ D + +++ ++ +++ N + HSQRCD+
Sbjct: 859 NSGKDTAGMPPVDMEQ-PEPQKPDNYNH-DMKARSVYLQRLKQWNQQCASNHSQRCDVNY 916
Query: 566 KLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHW 625
KL +AR E FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L F + +PLGK+GL W
Sbjct: 917 KLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLMFADAKPLGKTGLRW 975
Query: 626 LKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACI 685
L+IH++N++ G DK + R F +H DI DS + L+G+RWWL+A+DP+QCLAAC+
Sbjct: 976 LRIHISNVF--GYDKASFGEREQFAIDHEADIRDSVERTLDGQRWWLKADDPWQCLAACM 1033
Query: 686 NLAEALRSPT-PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSG 744
L AL P PE S++PVHQDG+CNGLQHYAALG D GA VNL GD+PADVYSG
Sbjct: 1034 ELKAALDHPDGPEAYESNLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGDRPADVYSG 1093
Query: 745 IATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 804
+A V++++ +A K + A L +V RK+VKQTVMT+VYGVT+IGA++Q+ R
Sbjct: 1094 VADLVIKMLDEEAAKGERL------ATILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMR 1147
Query: 805 RLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+L R + + LF A+ + AK ++ + +F A+ I WL AKV
Sbjct: 1148 QLAARGDVPAE-DLFQAASFLAKIIMSCIGNLFSGAQKIQDWLIFSAKV 1195
>C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0G18744g PE=3 SV=1
Length = 1289
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 253/727 (34%), Positives = 366/727 (50%), Gaps = 90/727 (12%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLG---WF--------EPLRN 207
RQ ++E A DAA+E D + K +L K L + WF E +R
Sbjct: 353 RQHQLENRA-TDAAKERWR--HDFEEAKSRGDLSIQKKLNIKLWEWFNLMLPLVKEEVRR 409
Query: 208 AIVAEQELCKDTRL----------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNG-- 255
+ +DT L R +GPY + + M VIT+ +L+ L N+ G
Sbjct: 410 CAAVANKTAQDTSLSPQEKKQNKARQEYGPYLTLVDPEKMCVITILELLKL---NSTGGI 466
Query: 256 VGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXX 315
+ + + +G+AIE E R ++ K + E L
Sbjct: 467 IEGMRTARAVISVGKAIEMEFRAEMLLKNESHVFKDVNKKSHEFKL-------------- 512
Query: 316 XXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYI 375
Q+ + ++ + W QEA+ K+GS L+ +LI A +
Sbjct: 513 -----------------MVQRARATFRSIKIEESKVLWPQEARAKIGSILISMLIHVAKV 555
Query: 376 Q-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD-SLVQQGLEKSAR 429
+ P N+ G PAF H + NGSK GV++ SL+ Q +
Sbjct: 556 KVEGVDPVTNEKIKGEA---PAFSHGYQ-----YHNGSK-LGVLKIHRSLIHQLNGERLV 606
Query: 430 HMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKR-APVTQLNPVFEA 487
V P +PMLV P W ++ G Y + S ++R + +Q +K + ++ V+
Sbjct: 607 AAVQPQLLPMLVKPRAWNSWNSGGYYYTQSTLIRSKDSPEQVAYLKAVSDAGAIDNVYRG 666
Query: 488 LNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL--VDRKDVPLPEELDTEDEAEIRKWKWS 545
LN LG T W VN+++ +V+ Q+W G D+ + K P+ D + R+WK
Sbjct: 667 LNVLGETPWTVNRKMFNVMSQVWNSGKPFLDIPGIQEKLTLTPQPPRDADPSVHREWKLK 726
Query: 546 VKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 605
K + E + S RCD KL +AR E FY+PHNLDFRGRAYP+ P+ NHLG+D+
Sbjct: 727 NKELANEFSGNRSARCDANYKLEIARAFLGEK-FYFPHNLDFRGRAYPLSPHFNHLGNDM 785
Query: 606 CRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPL 665
RG++ F G+ LG +GL WLK+HL+NL+ G DK + R+ F E+H+DDI DSA PL
Sbjct: 786 SRGLMTFWHGKRLGSTGLRWLKVHLSNLF--GFDKAPLEDRVRFAEDHIDDIRDSAEHPL 843
Query: 666 EGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKL 725
+GK WW EA+ P+Q LA C+ L EAL+ P+ +SH PVHQDG+CNGLQHYAALG D
Sbjct: 844 DGKCWWKEADKPWQALATCMELNEALKMSNPDDFVSHQPVHQDGTCNGLQHYAALGGDIE 903
Query: 726 GAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQT 785
GA VNL+ D+P DVYS +A V+ + + A +T A L +++ RK+VKQT
Sbjct: 904 GATQVNLVPSDRPQDVYSHVAKLVVARLEKAAANGDET------AALLKDKIKRKVVKQT 957
Query: 786 VMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMG 845
VMT+VYGVTYIGA QI ++L D + + S Y K +++E+FE A I
Sbjct: 958 VMTNVYGVTYIGATHQIDKQLS--TLFNDHKRSYELSKYLTKHVFASVRELFEGAHLIQD 1015
Query: 846 WLGDCAK 852
WLG+CAK
Sbjct: 1016 WLGECAK 1022
>D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarpus siliculosus
GN=Esi_0208_0042 PE=3 SV=1
Length = 1167
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 253/774 (32%), Positives = 399/774 (51%), Gaps = 128/774 (16%)
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
Y L + Q+ E ++ ++A +Y ++++++ + ++ L W+ L+ +I E
Sbjct: 281 YSTLYQMQLDREDQSHQEACEKYGKMVKELMTMGKGTQMKPIERLLTTWYPALKESIERE 340
Query: 213 QE-----LCKDTRL----------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTN-GV 256
QE + D + R T+G + L AD AV+ MH+++ L++ + N GV
Sbjct: 341 QEAVWANVTDDNKGTVKTSGSFGGRGTYGAFLVMLKADKQAVLVMHEVVNLILASGNKGV 400
Query: 257 GSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXX 316
+ V+ +++ E ++ E + R + KK + S L V+
Sbjct: 401 ST---VRACTRVAELVQAEVNLMRMKKDGKKGQRVQ-----VSSLRHVR----------- 441
Query: 317 XXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTA--- 373
+ N+QA + +D W AQVK+G+ L++LLI+TA
Sbjct: 442 ------------------EVNKQAQDALDMLEDTH-WPIGAQVKLGAALIKLLIETACWT 482
Query: 374 ---------------YIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDS 418
+ + +G P + AF H + +S+ GS +
Sbjct: 483 YDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDIIK-GKNSRKGS----LTMAPE 537
Query: 419 LVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAP 477
+ + +++ + P ++PMLVPP +W ++G +L L + +MR G Q+ A++RA
Sbjct: 538 IFSKMVDEDISRLATPRFVPMLVPPLDWIKPNRGGFLRLRAQIMRTKGEAAQKHALRRAD 597
Query: 478 VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEELDT---- 533
+ Q V++ALN LG +WR+N VL + + DL KD+PLP D
Sbjct: 598 LRQ---VYKALNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIKDLPLPPRPDGVTVD 654
Query: 534 -------------EDEAEIRK-------WKWSVKNVRKENNERHSQRCDIELKLAVARKM 573
EDE ++ +K ++ +++N HS RCD+++K+ +A++
Sbjct: 655 RLGRLRAPVQGEHEDEEVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEF 714
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
+D Y+P+N+DFRGR YP+ P LN LGSD RG+L F E +PLG+ GL+WLK+HLANL
Sbjct: 715 RDH-VIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANL 773
Query: 634 YAGGVDKLCYDGRIAFTENHLDD----IFDSANKPLEGKRWWLEAEDPFQCLAACINLAE 689
Y G DK+ +D R+AF E H+D+ + DSA +PLEG+ WW +A+ P+QCLA C +L
Sbjct: 774 Y--GEDKVSFDDRVAFVEKHMDESWREVRDSALRPLEGECWWKDADSPWQCLAVCADLTA 831
Query: 690 ALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRV 749
AL SP P +S +PVHQDGSCNGLQHYAALG D G A VNL +P DVYSG+ V
Sbjct: 832 ALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVV 891
Query: 750 LEIMRRDAEKDPKTNPNALH------ARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
+ + +A P + + A+ + +DRK+VKQTVMTSVYGVT++GAR QI+
Sbjct: 892 KKKVALEASTVPPEGASVVDLANHEIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARAQIQ 951
Query: 804 RRLKERC----------AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWL 847
L ++ + E + ++ AS Y AK T+T L+E+F AR+ M WL
Sbjct: 952 NVLGDKMIGHTDESGVPSAEVEENVYKASAYVAKHTMTVLEELFTEARNTMDWL 1005
>F4P6A9_BATDJ (tr|F4P6A9) Putative uncharacterized protein OS=Batrachochytrium
dendrobatidis (strain JAM81 / FGSC 10211)
GN=BATDEDRAFT_35464 PE=4 SV=1
Length = 1404
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/526 (39%), Positives = 305/526 (57%), Gaps = 34/526 (6%)
Query: 344 VRGRDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQ---PPANQIGDGPPDIRPAFKHTLKN 399
R D W P WG+EA+VK+G+ L+ LL+ I P N+ G PAF+H + +
Sbjct: 588 TRLNDIWVPNWGEEAKVKIGTFLLHLLVQAGKIAVQVPDPNKPGHKMSMDVPAFEHKVLS 647
Query: 400 ISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSY 459
+ K YG I + V + +E ++ ++PMLV P W ++G YL S
Sbjct: 648 ------SYGKTYGYIIRHAAVMEMMENGCASVLPLHLPMLVQPRPWLSCNRGGYLQHGSQ 701
Query: 460 VMRIHGAKQQRDAVKRA-PVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLAD 518
++RI + R+ +K A L V A++ LGST W +N + V W K
Sbjct: 702 LVRILNNPEHREYLKAADEANHLPLVLRAVDKLGSTAWVINPIIYKVASTFWNKKESAPS 761
Query: 519 L---VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRK--ENNERHSQRCDIELKLAVARKM 573
+ + ++P P + DT +A +WK+ KN ++ + + HSQRCD+ K+ +ARK
Sbjct: 762 IPKPIVIPEIPKPSDYDTNPDA---RWKYIKKNTKRLQQISNNHSQRCDLNYKMEIARKY 818
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
E ++PHNLDFRGRAYPM P LNH+G+DLCRG+L+F +PLG++G+ WLKI ++NL
Sbjct: 819 LGE-TIFFPHNLDFRGRAYPMPPNLNHIGNDLCRGLLKFKVAKPLGENGMRWLKIQVSNL 877
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRS 693
G DK D R F E+H DI DSA PL+GKRWWL++E+P+Q LA CI L +A +
Sbjct: 878 --AGNDKASLDNRAKFAEDHRKDIIDSAEHPLDGKRWWLKSENPWQLLATCIELNQAWKC 935
Query: 694 PTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIM 753
P MS + +HQDGSCNGLQHYAALG D GA VNL + P DVYS ++ +V++++
Sbjct: 936 DNPLEFMSSIHIHQDGSCNGLQHYAALGGDVDGAKVVNLTRSEVPQDVYSSVSNQVMKLV 995
Query: 754 RRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIE 813
++ AE+ N A L+N+++RKLVKQTVMT+ YG+T+ GA DQ++ RL E E
Sbjct: 996 KQQAEQ------NVPEALLLLNRINRKLVKQTVMTNTYGITFSGAHDQVRNRLLEARVKE 1049
Query: 814 D------DAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
D QL + +A + ++ +FE AR+I WL + A +
Sbjct: 1050 SGDKALTDEQLHACALFATRLIFQSMGTIFEGARAIQVWLNETANI 1095
>C0RZR9_PARBP (tr|C0RZR9) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_00924 PE=3 SV=1
Length = 1319
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 251/717 (35%), Positives = 370/717 (51%), Gaps = 70/717 (9%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAI----VAE 212
RQ ++E++ E A + + E++RK + P +P M +L W L + I
Sbjct: 253 RQRRLESDCVESAIARWHKESENLRKVGVNP-IPSKPMGALLYDWHTQLMSKIKEELERI 311
Query: 213 QELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGS-AKVVQGA 265
+E + TR+ R+ PY + D +A +T+ L N NGV K+
Sbjct: 312 EESEQKTRMLPEDAKRVEISPYLRAIKMDKLAALTILSTFNAL--NKNGVDKGVKLTILV 369
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
+G++I E +F E K + + L V KG
Sbjct: 370 MYLGKSIHDEFMAMQFRELENKSSSNGRTSKFIDKL--VHKGTRKA-------------- 413
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYI-----QPP 378
+ Q I + +P W Q K+G+CL +L+ +A + P
Sbjct: 414 ----------QVQWKRLIAKFEHSQRPVEWSPIVQAKIGACLALMLLSSATVPVFSKDPK 463
Query: 379 ANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPM 438
N+ + AF+ + + G + V D +V++ + ++ ++PM
Sbjct: 464 TNKTKRSD---QMAFRRVYQ-----LERGFRVGYVHAHDRIVEKLRREPLGDLLAKHLPM 515
Query: 439 LVPPNNWTGYDKGAYLFLPSYVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKW 496
+ PP WT G +L PS V+R+ G Q V+ A L+ VF L LG T W
Sbjct: 516 VCPPRPWTSARDGGFLKTPSPVLRVKEGDVSQLSYVETAAARGDLDTVFAGLTVLGKTGW 575
Query: 497 RVNKRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNE 555
++N+ VL V+ + W G +A+L + D+P PE +TED + + + + +
Sbjct: 576 KINRGVLEVMFEAWNSGEEIANLAPETPDIPEPERPNTEDRDALTDYYRAKMHAANTRSS 635
Query: 556 RHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEG 615
HSQRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +G
Sbjct: 636 YHSQRCFQNFQLEIARAYRNET-FYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFNKG 694
Query: 616 RPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAE 675
R LG SGL WLKIHLAN++ G DK + R F+ +HL+DI DSA L+GK+WWL+A
Sbjct: 695 RELGTSGLRWLKIHLANVF--GFDKASFQEREQFSMDHLEDIRDSAINGLKGKKWWLDAA 752
Query: 676 DPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGG 735
DPFQCLAACI L A++ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL
Sbjct: 753 DPFQCLAACIELTNAMQLEDPTKFVSHLPVHQDGSCNGLQHYAALGGDIIGAQQVNLEPS 812
Query: 736 DQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTY 795
D+P+D+Y+G+A V +++DA +T A+ L N++ RK+VKQTVMT+VYGVT+
Sbjct: 813 DRPSDIYTGVAEHVKASIQKDAADGNET------AKLLENKITRKIVKQTVMTNVYGVTF 866
Query: 796 IGARDQIKRRLKERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+GA Q++++L + + + G + Y A+ AL MF A +I WLGDCA
Sbjct: 867 LGAIRQVRKQLLDHYPELFHSGVVGQCATYIARKIFAALGSMFTGAHNIQFWLGDCA 923
>Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyostelium discoideum
GN=rpmA PE=2 SV=1
Length = 950
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/425 (45%), Positives = 271/425 (63%), Gaps = 22/425 (5%)
Query: 436 MPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTK 495
PM++ P W +G YL +MR +G+ Q ++ + ++ ++ ALN LG T
Sbjct: 385 FPMVIKPLPWITPTEGPYLHYKVPIMRTNGSAMQ---LRTLVDSDMSLIYRALNILGETP 441
Query: 496 WRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPE-----ELDTEDEAEIRKWKWSVKNVR 550
W +N+ + +VI + WA GG + D+ R D PE D E E+ K + +K++
Sbjct: 442 WVINRDLYNVILEAWANGGNIGDIPKRTDFEYPEISDDMLFDHEARKELYKKEQRIKSL- 500
Query: 551 KENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 610
N HS RCD KL VARK D Y+PHN+DFRGR+YP+ P+LNHLGSD CR +L
Sbjct: 501 --NFNLHSLRCDTNYKLEVARKFLDH-TLYFPHNIDFRGRSYPIPPHLNHLGSDFCRSLL 557
Query: 611 EFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRW 670
+F + PLG+ GL WLKIH+ANLY GVDK+ + R+AFTE ++++IFDS + PL G +W
Sbjct: 558 KFEKSLPLGEKGLEWLKIHVANLY--GVDKIPLNERLAFTERNMENIFDSVDSPLNGNKW 615
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
WL+A++P+Q LAAC+ L +A+RS P +S++P+HQDG+CNGLQHYAALG D GA V
Sbjct: 616 WLKADNPWQTLAACMELTKAIRSGKPAEFLSNLPIHQDGTCNGLQHYAALGGDVWGAEKV 675
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSV 790
NL+ D P DVYS +A V +I+ DA+ + A+ + +VDRKLVKQTVMTSV
Sbjct: 676 NLLPSDCPQDVYSSVAQLVEQIVEEDAKNGDEI------AQFFLGKVDRKLVKQTVMTSV 729
Query: 791 YGVTYIGARDQIKRRLKERCA--IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLG 848
YGVTYIGAR+QI+ + E+ + D+ +F +S Y K T +L MF ARSIM W+
Sbjct: 730 YGVTYIGAREQIENAILEKFSDLDLDEDFIFKSSTYITKNTFASLNNMFVGARSIMKWMS 789
Query: 849 DCAKV 853
DCA +
Sbjct: 790 DCATL 794
>R7YGD8_9EURO (tr|R7YGD8) Uncharacterized protein OS=Coniosporium apollinis CBS
100218 GN=W97_00163 PE=4 SV=1
Length = 1415
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 295/513 (57%), Gaps = 32/513 (6%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI--RPAFKHTLKNISTDSQNGSKR 410
W + KVG+ L+ +I+ + G PAF HT+ +R
Sbjct: 538 WPAVVKAKVGAMLISKVIEVCRMPVTRTDAKTGKTVTVQEPAFSHTVLF------EKGRR 591
Query: 411 YGVIEC-DSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAK-- 467
G IE + L ++ + R + +PM+V P WTGY +G +L P+ V+R G
Sbjct: 592 VGHIEAHEELAKKIKTEPPRGALGARLPMVVEPKPWTGYREGGFLRYPTPVVRQRGQDDI 651
Query: 468 QQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV-DRKDVP 526
Q+ AV A L+ VF LN LG T WR+N +VL V+ W G + +L + D+P
Sbjct: 652 QKVYAVAAAEKGDLDQVFAGLNVLGRTPWRINSKVLDVMADAWNTGEAIGELAPENPDIP 711
Query: 527 LPEELDTEDEAEIRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDEDGFYYPH 583
P E +++A+ + +W +K +++ +N + HSQRC +L +AR ++DE FY+PH
Sbjct: 712 YPPE--PKEDADPMERRWWLKRIKEIDNTKSGYHSQRCYQNFQLEIARALRDE-VFYFPH 768
Query: 584 NLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCY 643
NLDFRGRAYP+ P NH+G+D RG+L FG G+ LG GL WLK+HLANL G DK
Sbjct: 769 NLDFRGRAYPLPPLFNHMGADPARGLLVFGTGKELGSVGLPWLKVHLANL--AGYDKASL 826
Query: 644 DGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHM 703
R F H+DDI DSA PL G+RWWL+AEDP+QCLA C L A SP P +SH+
Sbjct: 827 KEREEFATKHMDDICDSAKNPLGGRRWWLKAEDPWQCLATCFELEAAFNSPDPTRYVSHL 886
Query: 704 PVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRV-LEIMRRDAEKDPK 762
PVHQDG+CNGLQHYAALG DK GA+ VNL D+P DVY+ +A V EI + AE +P
Sbjct: 887 PVHQDGTCNGLQHYAALGGDKAGASQVNLEPSDRPQDVYTAVAELVKAEIKQEAAEGNPA 946
Query: 763 TNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD----AQL 818
A+ L + RK+VKQTVMT+VYGVT+ GAR Q++ RL++ ++ A L
Sbjct: 947 -------AKFLDGHISRKVVKQTVMTNVYGVTFAGARAQVQARLRDIFPKFEEQPGFAGL 999
Query: 819 FGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
G + Y A+ AL MF A I WLG+CA
Sbjct: 1000 PGLAAYIARKIFAALASMFGGAHDIQYWLGECA 1032
>C1G892_PARBD (tr|C1G892) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_03397 PE=3 SV=1
Length = 1408
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 251/717 (35%), Positives = 370/717 (51%), Gaps = 70/717 (9%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAI----VAE 212
RQ ++E++ E A + + E++RK + P +P M +L W L + I
Sbjct: 366 RQRRLESDCVESAIARWHKESENLRKVGVNP-IPSKPMGALLYDWHTQLMSKIKEELERI 424
Query: 213 QELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGS-AKVVQGA 265
+E + TR+ R+ PY + D +A +T+ L N NGV K+
Sbjct: 425 EESEQKTRMLPEDAKRVEISPYLRAIKMDKLAALTILSTFNAL--NKNGVDKGVKLTILV 482
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
+G++I E +F E K + + LA KG
Sbjct: 483 MYLGKSIHDEFMAMQFRELENKSSSNGRTSKFIDKLA--HKGTRKA-------------- 526
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYI-----QPP 378
+ Q I + +P W Q K+G+CL +L+ +A + P
Sbjct: 527 ----------QVQWKRLIAKFEHSQRPVEWSPIVQAKIGACLALMLLSSATVPVFSKDPK 576
Query: 379 ANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPM 438
N+ + AF+ + + G + V D +V++ + ++ ++PM
Sbjct: 577 TNKTKRSD---QMAFRRVYQ-----LERGFRVGYVHAHDRIVEKLRREPLGDLLAKHLPM 628
Query: 439 LVPPNNWTGYDKGAYLFLPSYVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKW 496
+ PP WT G +L PS V+R+ G Q V+ A L+ VF L LG T W
Sbjct: 629 VCPPRPWTSARDGGFLKTPSPVLRVKEGDVSQLSYVETAAARGDLDTVFAGLTVLGKTGW 688
Query: 497 RVNKRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNE 555
++N+ VL V+ + W G +A+L + D+P PE +TED + + + + +
Sbjct: 689 KINRGVLEVMLEAWNSGEEIANLAPETPDIPEPERPNTEDRDALTDYYRAKVHAANTRSS 748
Query: 556 RHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEG 615
HSQRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +G
Sbjct: 749 YHSQRCFQNFQLEIARAYRNET-FYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFNKG 807
Query: 616 RPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAE 675
R LG SGL WLKIHLAN++ G DK + R F+ +HL+DI DSA L+GK+WWL+A
Sbjct: 808 RELGTSGLRWLKIHLANVF--GFDKASFQEREQFSMDHLEDIRDSAINGLKGKKWWLDAA 865
Query: 676 DPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGG 735
DPFQCLAACI L A++ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL
Sbjct: 866 DPFQCLAACIELTNAMQLEDPTKFVSHLPVHQDGSCNGLQHYAALGGDIIGAQQVNLEPS 925
Query: 736 DQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTY 795
D+P+D+Y+G+A V +++DA +T A+ L N++ RK+VKQTVMT+VYGVT+
Sbjct: 926 DRPSDIYTGVAEHVKASIQKDAADGNET------AKLLENKITRKIVKQTVMTNVYGVTF 979
Query: 796 IGARDQIKRRLKERCAIEDDAQLFGA-SCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+GA Q++++L + + + G + Y A+ AL MF A +I WLGDCA
Sbjct: 980 LGAIRQVRKQLLDHYPELFHSGVVGQYATYIARKIFAALGSMFTGAHNIQFWLGDCA 1036
>B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodactylum tricornutum
(strain CCAP 1055/1) GN=RpoT PE=3 SV=1
Length = 1188
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/792 (30%), Positives = 389/792 (49%), Gaps = 113/792 (14%)
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQE- 214
L++ Q+ +E EA +++ YQ +++ R +K +L ++ L W++PL++ I + Q+
Sbjct: 260 LEELQLWLECEAQQESITRYQHVIDSARTRKDYASLSLVQRHVLQWYQPLKHEIESLQKA 319
Query: 215 ----------LCKDTRLRLTHGPYFNELPADMMAVITMHK--LMGLLMTNTNGVGSAKVV 262
+ R +GP+ LP + +AVI H+ + GL +G
Sbjct: 320 YIFKEQDPEGVVLTKRAANVYGPFICSLPPEKLAVICAHEAIMSGLSNPGVDGRDGTAFT 379
Query: 263 QGASQIGEAIEHEARIY-----RFMEKTKKKT---------KATDNCEGESDLAPVK--- 305
A +IG+A+E E I RF E + + K + EG+ +L+ K
Sbjct: 380 AVARRIGDAVEQEVVIQRMLHRRFKESQARHSTQDPNRILPKPEEEVEGDVELSTDKIDE 439
Query: 306 --------------KGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQAL--GIVRGR-- 347
G K + + I R R
Sbjct: 440 DMNDGNATTRSKSSTGTEDVHKWAYAASHLKNYLDEISYRKPSVKKRLVIEYAIRRARTI 499
Query: 348 -DDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKH-----TLKNIS 401
++ + W + ++++G+ L Q+L++ A ++ Q AF + + + +
Sbjct: 500 LENDEAWTESQKIQLGAVLFQVLLNKANVRIDGKQ--------EKAFTYEKFWISKQKVQ 551
Query: 402 TDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVM 461
+ + + ++ D L G + + PM+VPP W+ D+G Y L + ++
Sbjct: 552 SIVSMNDRLHKMLVSDKLQSFGTTTTRQK------PMIVPPKPWSRPDEGGYKMLRTELL 605
Query: 462 RIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD 521
R HG Q++ ++ L+ VF+ LN LG WR+N+RVL+V + W L D+
Sbjct: 606 RYHGCNMQKEVLQN---VDLSIVFDGLNALGRVPWRINQRVLTVAQRCWDNNIPLGDIPS 662
Query: 522 RKDVPLPEE------------------LDTEDEAEIRKWKWS-VKNVRKENNERHSQRCD 562
+ D PLPEE +E + + W+ + V++ N + S RC
Sbjct: 663 KDDNPLPEEPLHPKRQEQFWEPETPGYESYVEEYRLYRESWNKFRRVKQRNMDLRSLRCS 722
Query: 563 IELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSG 622
LKL A K K+ + ++P+N+DFRGRAYP+ P+L+++GSDLCRG+L+F E +PLG G
Sbjct: 723 AMLKLDQAEKFKEFEEIFFPYNMDFRGRAYPVPPHLSNVGSDLCRGVLKFAEAKPLGPRG 782
Query: 623 LHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLA 682
L+WLK+HLAN G DK+ +D R+ F +++L+ + SA P G+RWW+ EDPFQ LA
Sbjct: 783 LYWLKVHLANF--AGKDKMSFDDRVKFVDDNLEQVRLSAEDPFAGERWWMSLEDPFQGLA 840
Query: 683 ACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVY 742
C+ + +A+ PE+ + +PVH DGSCNGLQHYAALGRD +G AVNL D+P DVY
Sbjct: 841 TCLEIIDAIDCGNPESFLCSLPVHMDGSCNGLQHYAALGRDSVGGKAVNLCAYDEPQDVY 900
Query: 743 SGIATRVLEIMRRDAEKDPKTNPNALH--------------ARNLINQ-VDRKLVKQTVM 787
G+ V+ + +AE+ + + L A L+N +DR +VK+TVM
Sbjct: 901 VGVMHEVVRRVAAEAERQLDFDTSDLESLSRKQKKELSYNRAAKLVNGLIDRGVVKRTVM 960
Query: 788 TSVYGVTYIGARDQIKRRLKERCAI------EDDAQLFGASCYAAKTTLTALQEMFEAAR 841
TSVYGVTYIGAR QI+ ++ + E ++F A Y A T+ + ++F AR
Sbjct: 961 TSVYGVTYIGARQQIQEKIISKLEAQGHDVDEMSNEIFQACGYVASLTMEVMGDLFTGAR 1020
Query: 842 SIMGWLGDCAKV 853
M WL CA++
Sbjct: 1021 ETMNWLTTCARM 1032
>H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0C03560 PE=3 SV=1
Length = 1284
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 262/729 (35%), Positives = 377/729 (51%), Gaps = 90/729 (12%)
Query: 157 KKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSL---FLGWFEPLRNAIVAEQ 213
++RQ +E A DAA+E + D + K +L +SL W+ + + E
Sbjct: 345 QERQHALELRA-SDAAKERWK--HDFEEAKARGDLSIKRSLNAKLWKWYNAMLPLLKKEI 401
Query: 214 ELCKDT---------RL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNG--V 256
LC+ RL RL + PY + + M VI + +++ L N+ G +
Sbjct: 402 NLCRAVSEKSAANKERLPKADSKRLEYAPYLALVNPEKMCVIAILEILKL---NSTGGII 458
Query: 257 GSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATD--NCEGESDLAPVKKGXXXXXXX 314
+ + +G+AIE E R + ++ K + + E ++ L KK
Sbjct: 459 EGMRTARALISVGKAIEMEFRSEQLLKNESYIFKDVNKKSPEFKTYLRKAKKSFRS---- 514
Query: 315 XXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAY 374
K +QA + W Q + KVGS L+ +LI A
Sbjct: 515 --------------------SKIEQAKIV---------WPQSIRAKVGSILVSILIHVAK 545
Query: 375 IQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSA 428
++ P +Q G PAF H S NGSK GVI SLVQQ +
Sbjct: 546 VEIEGIDPITHQKIFGTA---PAFSH-----SYQYHNGSK-LGVIRIHKSLVQQLDGERL 596
Query: 429 RHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQ-LNPVFE 486
V P +PMLV P W + G Y + S ++R + +Q ++ A Q L+ V++
Sbjct: 597 MASVQPQLLPMLVEPRPWVNWKSGGYYYTQSTLVRSKDSPEQIAYLEAASNVQALDKVYD 656
Query: 487 ALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL--VDRKDVPLPEELDTEDEAEIRKWKW 544
LN LG T W VN+R+ +I ++W KGG ++ + ++ LP D + I +WK
Sbjct: 657 GLNVLGDTAWTVNRRIFEIISKVWNKGGSFLEIPGIQQESEFLPPPPKNADPSVINEWKN 716
Query: 545 SVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSD 604
K + + + S RCD+ KL +AR E FY+PHNLDFRGRAYP+ P+ NHLG+D
Sbjct: 717 KNKILANKYSSNRSMRCDLNYKLEIARAFLGE-RFYFPHNLDFRGRAYPLSPHFNHLGND 775
Query: 605 LCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKP 664
+ RG+L F +G+ LGK GL WLK+HL+NLY GVDK+ R F ++HL++I DSA P
Sbjct: 776 MSRGLLIFWKGKRLGKEGLSWLKVHLSNLY--GVDKVPLLERENFIDDHLEEIKDSAENP 833
Query: 665 LEGKR-WWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRD 723
L GK WW +A+ P+Q LA CI L EAL+ PE +SH PVHQDG+CNGLQHYAALG D
Sbjct: 834 LNGKYLWWQKADKPWQALATCIELNEALKLENPEDFISHQPVHQDGTCNGLQHYAALGGD 893
Query: 724 KLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVK 783
GA VNL+ G++P DVY+ +A V +R +KD PN A+ L+++++RK+VK
Sbjct: 894 IEGAQQVNLVPGEKPNDVYAHVAKIVQGKLRETLQKD----PNDEMAKFLVDKLNRKVVK 949
Query: 784 QTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSI 843
QTVMT VYGVT +GA QI ++L + +D + S Y A+ A++E FE A I
Sbjct: 950 QTVMTHVYGVTLLGATLQIDKQLND--LFDDSSDSMKYSKYLARHVFAAIRESFEGAHLI 1007
Query: 844 MGWLGDCAK 852
WLG C+K
Sbjct: 1008 QDWLGVCSK 1016
>G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavia terrestris
(strain ATCC 38088 / NRRL 8126) GN=THITE_2114671 PE=3
SV=1
Length = 1408
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 305/516 (59%), Gaps = 43/516 (8%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR-------PAFKHTLKNISTDSQ 405
W + K G+ L+ LID+A I + PD + PAF HT++
Sbjct: 561 WPTVIRAKFGAVLLGALIDSAKIV-----VNREHPDTKQMVTQSMPAFIHTVQ------L 609
Query: 406 NGSKRYGVIECDSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIH 464
++ GVI+ + + +++ R + ++PM+V P W+ +DKG ++ PS ++R+
Sbjct: 610 KKGRKVGVIQPNRALVDLMKREPRGEALARHLPMVVEPVPWSRFDKGGFIGSPSPLIRLK 669
Query: 465 G-AKQQR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL 519
K+QR A++R + Q+ L+ LG T WR+N+ V V+ + W G A+
Sbjct: 670 NHEKEQRFYAEAAIERGDMEQM---MRGLDVLGKTAWRINRPVFDVMLEAWNSGEEFANF 726
Query: 520 --VDRKDVPLPEELD-TEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDE 576
+D K +P+P E D T+D + R W +VK E + HS RC I +L +AR +D+
Sbjct: 727 PALDPK-IPIPPEPDSTDDPMKRRLWVRAVKAAENEKSGLHSVRCFINFQLEIARAFRDQ 785
Query: 577 DGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAG 636
FY+PHNLDFRGRAYP+ YLNH+G+D RG+L F +G+PLGK+GL WLK+HL+N+Y
Sbjct: 786 T-FYFPHNLDFRGRAYPLPTYLNHMGADHMRGLLIFAKGKPLGKNGLRWLKVHLSNVY-- 842
Query: 637 GVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTP 696
G DK R F +L++IFDSA+ PL GKRWWL AEDP+QCLAAC L AL SP P
Sbjct: 843 GFDKASLQEREDFANQNLENIFDSADNPLTGKRWWLGAEDPWQCLAACFELKAALSSPDP 902
Query: 697 ETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRD 756
+SH PVHQDG+CNGLQHYAALG D GA VNL+ GD+PADVY+ +A E+++
Sbjct: 903 AAFVSHFPVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGDRPADVYAAVA----ELVQEQ 958
Query: 757 AEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA-IEDD 815
KD N A+ + +++RK+VKQTVMT+VYGVT++GA+ Q++++L IE +
Sbjct: 959 VAKDVAAGNN--FAKAVDGKINRKVVKQTVMTNVYGVTFVGAKKQVQKQLDALYPDIEKE 1016
Query: 816 AQLFGA--SCYAAKTTLTALQEMFEAARSIMGWLGD 849
+ A Y A AL MF A I WLG+
Sbjct: 1017 TGISSAILGSYIASKVFVALSTMFRGAHDIQNWLGE 1052
>A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 338/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D + +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_3346 PE=4 SV=1
Length = 1351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 338/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D + +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RPO41 PE=3 SV=1
Length = 1351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 338/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D + +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ACR224C PE=3 SV=1
Length = 1295
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/685 (35%), Positives = 357/685 (52%), Gaps = 90/685 (13%)
Query: 198 FLGWFEPLRNAIVAEQELCKD----------TRLRLTHGPYFNELPADMMAVITMHKLMG 247
+LG L+ + A +EL R RL + PY + + M VIT+ +L+
Sbjct: 406 YLGMIPLLKEEVKACRELLASDILLTERRPHIRSRLEYAPYITLVNPEKMCVITILELLS 465
Query: 248 LLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK---KKTKATDNCEGESDLAP 303
L +T GV + + IG+A+E E R ++ K K+ +A N
Sbjct: 466 L--NSTGGVSEGMRTTRAVLAIGKAVEMEYRSEALLKSEKSIFKEVRANSN--------- 514
Query: 304 VKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGS 363
Q+ + + + W + KVGS
Sbjct: 515 -------------------------EFKKLVQRAKTTFRNTQIEESKVLWPHNIKAKVGS 549
Query: 364 CLMQLLIDTAYIQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD- 417
L+ +LI A + P N+ G PA HT + + GSK GV++
Sbjct: 550 LLISMLIHVAKVNVKGVDPVTNKTVYGKA---PAICHTFQ-----YRMGSK-VGVLKLHR 600
Query: 418 SLVQQ-GLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRA 476
SL Q ++ + + ++PMLV P WT ++ G YLF S ++R + +Q +K
Sbjct: 601 SLANQMSSDRLSANFQPQHLPMLVKPRPWTSWNSGGYLFTKSTLIRSKDSPEQSAYIKAV 660
Query: 477 P---VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKD-VPLPEELD 532
V Q V++ LN LG T W VNK +L +I ++W G D+ ++D + LP +
Sbjct: 661 TGKGVVQ--NVYKGLNVLGETAWTVNKNMLHIISKVWNSGTEFLDIPPQQDELLLPAKPR 718
Query: 533 TEDEAE-----IRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 587
ED +E +++WK + + E + S RCD KL +AR E FY+PHN+DF
Sbjct: 719 GEDGSEPEPIVLKRWKQECRFLNAEYQKHRSMRCDANYKLEIARAFIGEK-FYFPHNMDF 777
Query: 588 RGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRI 647
RGRAYP+ P+ NHLG+D+ R +L F EG+ LGK GL WLKIH+ NLY G+DK ++ R+
Sbjct: 778 RGRAYPLAPHFNHLGNDMTRSLLIFWEGKRLGKEGLRWLKIHMGNLY--GLDKQTFEARV 835
Query: 648 AFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQ 707
AFTE HL+DI DSA PL GK WW +A+ P+QCLA C+ + A + PE +SH PVHQ
Sbjct: 836 AFTEAHLEDIKDSAENPLNGKGWWKKADKPWQCLATCMEINNAYKLSNPEDYVSHQPVHQ 895
Query: 708 DGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNA 767
DG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A V E + + A + + NA
Sbjct: 896 DGTCNGLQHYAALGGDIEGARQVNLVPSDKPQDVYAFVAKLVTERLEKAALEG---DQNA 952
Query: 768 LHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAK 827
+NLI RK+VK+TVMT+VYGVT+IGA +QI + L++ A D++ + + Y K
Sbjct: 953 AQLKNLIT---RKVVKRTVMTNVYGVTFIGATNQIDKELQD--AFPDNS--YDMARYLTK 1005
Query: 828 TTLTALQEMFEAARSIMGWLGDCAK 852
+++E+F AA I WLG+ AK
Sbjct: 1006 HVFNSIRELFHAAHLIQDWLGESAK 1030
>M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=FAGOS_FACR224C PE=4
SV=1
Length = 1295
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/685 (35%), Positives = 357/685 (52%), Gaps = 90/685 (13%)
Query: 198 FLGWFEPLRNAIVAEQELCKD----------TRLRLTHGPYFNELPADMMAVITMHKLMG 247
+LG L+ + A +EL R RL + PY + + M VIT+ +L+
Sbjct: 406 YLGMIPLLKEEVKACRELLASDILLTERRPHIRSRLEYAPYITLVNPEKMCVITILELLS 465
Query: 248 LLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYRFMEKTK---KKTKATDNCEGESDLAP 303
L +T GV + + IG+A+E E R ++ K K+ +A N
Sbjct: 466 L--NSTGGVSEGMRTTRAVLAIGKAVEMEYRSEALLKSEKSIFKEVRANSN--------- 514
Query: 304 VKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGS 363
Q+ + + + W + KVGS
Sbjct: 515 -------------------------EFKKLVQRAKTTFRNTQIEESKVLWPHNIKAKVGS 549
Query: 364 CLMQLLIDTAYIQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD- 417
L+ +LI A + P N+ G PA HT + + GSK GV++
Sbjct: 550 LLISMLIHVAKVNVKGVDPVTNKTVYGKA---PAICHTFQ-----YRMGSK-VGVLKLHR 600
Query: 418 SLVQQ-GLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRA 476
SL Q ++ + + ++PMLV P WT ++ G YLF S ++R + +Q +K
Sbjct: 601 SLANQMSSDRLSANFQPQHLPMLVKPRPWTSWNSGGYLFTKSTLIRSKDSPEQSAYIKAV 660
Query: 477 P---VTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKD-VPLPEELD 532
V Q V++ LN LG T W VNK +L +I ++W G D+ ++D + LP +
Sbjct: 661 TGKGVVQ--NVYKGLNVLGETAWTVNKNMLHIISKVWNSGTEFLDIPPQQDELLLPAKPR 718
Query: 533 TEDEAE-----IRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 587
ED +E +++WK + + E + S RCD KL +AR E FY+PHN+DF
Sbjct: 719 GEDGSEPEPIVLKRWKQECRFLNAEYQKHRSMRCDANYKLEIARAFIGEK-FYFPHNMDF 777
Query: 588 RGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRI 647
RGRAYP+ P+ NHLG+D+ R +L F EG+ LGK GL WLKIH+ NLY G+DK ++ R+
Sbjct: 778 RGRAYPLAPHFNHLGNDMTRSLLIFWEGKRLGKEGLRWLKIHMGNLY--GLDKQTFEARV 835
Query: 648 AFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQ 707
AFTE HL+DI DSA PL GK WW +A+ P+QCLA C+ + A + PE +SH PVHQ
Sbjct: 836 AFTEAHLEDIKDSAENPLNGKGWWKKADKPWQCLATCMEINNAYKLSNPEDYVSHQPVHQ 895
Query: 708 DGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNA 767
DG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A V E + + A + + NA
Sbjct: 896 DGTCNGLQHYAALGGDIEGARQVNLVPSDKPQDVYAFVAKLVTERLEKAALEG---DQNA 952
Query: 768 LHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAK 827
+NLI RK+VK+TVMT+VYGVT+IGA +QI + L++ A D++ + + Y K
Sbjct: 953 AQLKNLIT---RKVVKRTVMTNVYGVTFIGATNQIDKELQD--AFPDNS--YDMARYLTK 1005
Query: 828 TTLTALQEMFEAARSIMGWLGDCAK 852
+++E+F AA I WLG+ AK
Sbjct: 1006 HVFNSIRELFHAAHLIQDWLGESAK 1030
>C1GZG1_PARBA (tr|C1GZG1) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain ATCC MYA-826 / Pb01) GN=PAAG_03905
PE=3 SV=1
Length = 1405
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 251/714 (35%), Positives = 367/714 (51%), Gaps = 64/714 (8%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKL--APNLPYMKSLFLGWFEPLRNAIVAEQELC 216
RQ ++E++ E A + + E++RK + P P M +L W L + I E E
Sbjct: 366 RQRRLESDCVESAIARWHKESENLRKVGVNPVPGKP-MGALLYDWHTQLMSKITEELERI 424
Query: 217 ----KDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGS-AKVVQGA 265
+ TR+ R+ PY + D +A +T+ L N NGV K+
Sbjct: 425 EESERKTRMLPEDAKRVEISPYLRAIKMDKLAALTILSTFNAL--NKNGVDKGVKLTILV 482
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
+G++I E + E K + L V KG
Sbjct: 483 MYLGKSIHDEFMAMQLRELENKSRSNGRTSKFIDKL--VHKGTRKA-------------- 526
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYIQPPAN--Q 381
+ Q I R +P W Q K+G+CL +L+ +A + +N +
Sbjct: 527 ----------QVQWKRLIARFEQSQRPVEWSPIVQAKIGACLALMLLSSATVPVFSNDPK 576
Query: 382 IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVP 441
+ AF+ + + G + V D +V++ + ++ ++PM+ P
Sbjct: 577 TNKTKRSDQMAFRRVYQ-----LERGFRVGYVHAHDRIVEKLRREPLGDLLAKHLPMVCP 631
Query: 442 PNNWTGYDKGAYLFLPSYVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVN 499
P WT G +L PS V+R+ G Q V+ A L+ VF L LG T W+VN
Sbjct: 632 PRPWTSARNGGFLESPSPVLRVKEGDVSQLSYVETAAARGDLDTVFAGLTVLGKTGWKVN 691
Query: 500 KRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHS 558
+ VL V+ + W G +A+L + D+P PE +TED + + + + + HS
Sbjct: 692 RGVLEVMLEAWNSGEEIANLAPETPDIPEPERPNTEDRDALIDYYRAKMHAANTRSSYHS 751
Query: 559 QRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPL 618
QRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +GR L
Sbjct: 752 QRCFQNFQLEIARAYRNET-FYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGREL 810
Query: 619 GKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPF 678
G SGL WLKIHLAN++ G DK + R F+ +HL+DI DSA L+GK+WW++A DPF
Sbjct: 811 GTSGLRWLKIHLANVF--GFDKASFQEREQFSMDHLEDIRDSAINGLKGKKWWVDAADPF 868
Query: 679 QCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQP 738
QCLAACI L A++ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL D+P
Sbjct: 869 QCLAACIELTNAMQLEDPTKFVSHLPVHQDGSCNGLQHYAALGGDIIGAQQVNLEPSDRP 928
Query: 739 ADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGA 798
+D+Y+G+A V +++DA +T A+ L N++ RK+VKQTVMT+VYGVT++GA
Sbjct: 929 SDIYTGVAEHVKASIQKDAADGNET------AKLLENKITRKIVKQTVMTNVYGVTFLGA 982
Query: 799 RDQIKRRLKERCAIEDDAQLFGA-SCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
Q++++L + + + G + Y A+ AL MF A +I WLGDCA
Sbjct: 983 IRQVRKQLLDHYPELFHSGVVGQYATYIARKIFAALGSMFTGAHNIQFWLGDCA 1036
>C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 337/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1F14_0430g PE=3 SV=1
Length = 1351
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 337/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SCRG_05511 PE=3 SV=1
Length = 1351
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 337/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>F0UNN0_AJEC8 (tr|F0UNN0) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H88) GN=HCEG_06850 PE=3 SV=1
Length = 1397
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 251/716 (35%), Positives = 369/716 (51%), Gaps = 68/716 (9%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAI----VAE 212
RQ ++E++ E A +++ E + + + P +P M + W L + I
Sbjct: 366 RQRRLESDCVESAIARWKKESEMLHRVGVNP-IPSKPMGAFLYDWHTQLMSRINEELERI 424
Query: 213 QELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQG-A 265
+E K +R+ R+ PY + D +A +T+ L N +GV + G
Sbjct: 425 EESEKKSRMSPADSQRVEISPYLRAIKTDKLAALTILSTFNAL--NKSGVDKGLKLTGLV 482
Query: 266 SQIGEAI--EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
+G+A+ E+ A R +EK K TK + V KG
Sbjct: 483 MYVGKAVYDEYLAMQLRELEKKSKPTKKISALIDKL----VHKGTRKAQV---------- 528
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYIQPPAN- 380
Q I R +P W Q K+G+CL +L+ TA + P
Sbjct: 529 --------------QWRRIIARFEQSQRPVDWSPVVQAKIGACLASMLLSTATVPVPTKD 574
Query: 381 -QIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPML 439
+ + AF+ + + G + V D +V++ + ++ ++PM+
Sbjct: 575 PKTNQQKQTDQAAFRRVYQ-----LERGFRVGYVHANDYIVEKLRREPLGELLAKHLPMV 629
Query: 440 VPPNNWTGYDKGAYLFLPSYVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWR 497
PP WT G +L PS VMR+ G Q V+ A L+ VF L LG T W+
Sbjct: 630 CPPRPWTSARGGGFLEYPSTVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWK 689
Query: 498 VNKRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNER 556
+N+ VL+V+ + W G +A+L + ++ PE+ DT+D ++ + + +
Sbjct: 690 INRGVLNVMLEAWNSGEEIANLAPENPNIIEPEKPDTDDRDILKDYYRARMHATNARTGY 749
Query: 557 HSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGR 616
HSQRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +GR
Sbjct: 750 HSQRCFQNFQLEIARAYRNE-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGR 808
Query: 617 PLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAED 676
LG SGL WLKIHLAN++ G DK + R F +HL+DI DSA L+GKRWWL+A D
Sbjct: 809 ELGASGLRWLKIHLANVF--GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGD 866
Query: 677 PFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGD 736
PFQCLAACI L A+ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL D
Sbjct: 867 PFQCLAACIELTNAMALEDPTKYVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSD 926
Query: 737 QPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYI 796
+P+D+Y+G+A V + +++DA K +T A+ L +++ RK+VKQTVMT+VYGVT++
Sbjct: 927 RPSDIYTGVAEHVKQSIQKDAAKGNET------AKLLEDKITRKIVKQTVMTNVYGVTFL 980
Query: 797 GARDQIKRRLKERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
GA Q++++L + + + G + Y A+ AL MF A I WLGDCA
Sbjct: 981 GAIRQVRKQLVDHYPDLLHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 1036
>G4UJT0_NEUT9 (tr|G4UJT0) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_86464 PE=3 SV=1
Length = 1416
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/519 (39%), Positives = 303/519 (58%), Gaps = 39/519 (7%)
Query: 349 DWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP------PDIRPAFKHTLKNIST 402
D + W + KVG+ L+ L+DTA I + + P +PAF H ++
Sbjct: 540 DDEAWTTTIRTKVGAALLSALLDTAKI----TLVREDPVTKTLITQNQPAFSHVMQ---- 591
Query: 403 DSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
+ G K +I ++V+ + + + ++PM+ PP+ W ++KGAYL + V+R
Sbjct: 592 -LRKGKKIGTIIPNKAVVELLVREPVPDFLARHLPMVTPPDPWVSFEKGAYLETKTPVLR 650
Query: 463 I-HGAKQQR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
+ +G ++QR A+ R + Q VF+ L+ LG T W++N V V+ +W G +A
Sbjct: 651 LKNGEREQRLYTEAAIARGDMDQ---VFKGLDVLGKTGWKINSPVFKVMLDVWNSGKKVA 707
Query: 518 DLVDRK---DVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMK 574
++ D+P PE TED R W +K + E + HSQRC + +L +AR +
Sbjct: 708 NIPPLDPIFDLP-PEPASTEDPTVKRAWLKEIKVIENERSGLHSQRCFMNFQLEIARAYR 766
Query: 575 DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLY 634
D+ FY+PHN+DFRGRAYP+ PYLNH+G+D RG++ F +G+PLG+SGL WLK+HLAN+Y
Sbjct: 767 DQ-TFYFPHNVDFRGRAYPIPPYLNHMGADHVRGLMLFAKGKPLGESGLRWLKVHLANVY 825
Query: 635 AGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSP 694
G DK R F + ++++I DS PL G +WWL+AEDP+QCLA C LA AL
Sbjct: 826 --GFDKASLQERQDFADENIENIRDSVINPLNGNQWWLQAEDPWQCLATCFELAAALELE 883
Query: 695 TPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMR 754
P +SH+P+HQDG+CNGLQHYAALG D GA VNL+ GD+PADVYS +A V++ +
Sbjct: 884 DPTQYVSHLPIHQDGTCNGLQHYAALGGDTWGAQQVNLVPGDRPADVYSAVAKLVIKGIE 943
Query: 755 RDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE---RCA 811
D KD + A+ + ++ RK+VKQTVMT+VYGVTY+GA+ Q+ ++++
Sbjct: 944 DDLAKDNE------FAKAMHGKITRKVVKQTVMTNVYGVTYVGAKKQVLKQIEAAYPNIT 997
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
E + + Y + A+ MF+ A I WLG+
Sbjct: 998 AESGIEAALLASYVTQHIFRAMSTMFKGAHDIQNWLGEI 1036
>F8MFL5_NEUT8 (tr|F8MFL5) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2508 / ATCC MYA-4615 / P0657)
GN=NEUTE1DRAFT_121093 PE=3 SV=1
Length = 1416
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/519 (39%), Positives = 303/519 (58%), Gaps = 39/519 (7%)
Query: 349 DWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP------PDIRPAFKHTLKNIST 402
D + W + KVG+ L+ L+DTA I + + P +PAF H ++
Sbjct: 540 DDEAWTTTIRTKVGAALLSALLDTAKI----TLVREDPVTKTLITQNQPAFSHVMQ---- 591
Query: 403 DSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
+ G K +I ++V+ + + + ++PM+ PP+ W ++KGAYL + V+R
Sbjct: 592 -LRKGKKIGTIIPNKAVVELLVREPVPDFLARHLPMVTPPDPWVSFEKGAYLETKTPVLR 650
Query: 463 I-HGAKQQR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLA 517
+ +G ++QR A+ R + Q VF+ L+ LG T W++N V V+ +W G +A
Sbjct: 651 LKNGEREQRLYTEAAIARGDMDQ---VFKGLDVLGKTGWKINSPVFKVMLDVWNSGKKVA 707
Query: 518 DLVDRK---DVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMK 574
++ D+P PE TED R W +K + E + HSQRC + +L +AR +
Sbjct: 708 NIPPLDPIFDLP-PEPASTEDPTVKRAWLKEIKVIENERSGLHSQRCFMNFQLEIARAYR 766
Query: 575 DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLY 634
D+ FY+PHN+DFRGRAYP+ PYLNH+G+D RG++ F +G+PLG+SGL WLK+HLAN+Y
Sbjct: 767 DQ-TFYFPHNVDFRGRAYPIPPYLNHMGADHVRGLMLFAKGKPLGESGLRWLKVHLANVY 825
Query: 635 AGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSP 694
G DK R F + ++++I DS PL G +WWL+AEDP+QCLA C LA AL
Sbjct: 826 --GFDKASLQERQDFADENIENIRDSVINPLNGNQWWLQAEDPWQCLATCFELAAALELE 883
Query: 695 TPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMR 754
P +SH+P+HQDG+CNGLQHYAALG D GA VNL+ GD+PADVYS +A V++ +
Sbjct: 884 DPTQYVSHLPIHQDGTCNGLQHYAALGGDTWGAQQVNLVPGDRPADVYSAVAKLVIKGIE 943
Query: 755 RDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE---RCA 811
D KD + A+ + ++ RK+VKQTVMT+VYGVTY+GA+ Q+ ++++
Sbjct: 944 DDLAKDNE------FAKAMHGKITRKVVKQTVMTNVYGVTYVGAKKQVLKQIEAAYPNIT 997
Query: 812 IEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
E + + Y + A+ MF+ A I WLG+
Sbjct: 998 AESGIEAALLASYVTQHIFRAMSTMFKGAHDIQNWLGEI 1036
>E7R4S0_PICAD (tr|E7R4S0) DNA-directed RNA polymerase OS=Pichia angusta (strain
ATCC 26012 / NRRL Y-7560 / DL-1) GN=HPODL_1692 PE=3 SV=1
Length = 1327
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 247/723 (34%), Positives = 374/723 (51%), Gaps = 67/723 (9%)
Query: 157 KKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE---- 212
++RQ K+E+ + E A +++ E+++ + + ++ +L +PL + E
Sbjct: 384 EERQKKVESNSVEAARLKWEHEFENIKDKSMPASIGSYLHDWLTNMQPLIEQEIEEYWVA 443
Query: 213 QELCKDTRL-------------RLTHGPYFNELPADMMAVITMHKLMGLLMTN--TNGVG 257
++L K+ +L +L HGPY L A+ T+ +++ +++ +G
Sbjct: 444 RKLEKENQLEDTSSFDKERYSEKLKHGPYLTLLKPSKSAITTILEVIKTCVSSDLAHGAP 503
Query: 258 SAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXX 317
+KVV IG A+E E + R + K + +G
Sbjct: 504 VSKVVMA---IGRAMELEFKAQRLLAADIDVNKNFRAIRKTPEFKKFVRGAKASQLIREA 560
Query: 318 XXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQP 377
Q++ V W +++ +VGS ++ LL+ A +
Sbjct: 561 EKRAESSAG------------QSIAFV-------SWDTDSRCRVGSVMLSLLLQVAKVDV 601
Query: 378 PANQ--IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLV--QQGLEKSARHMVI 433
GD + PAF HT D QNGSK GVI+ ++ + G E+ +
Sbjct: 602 EGTDPITGDTKTALAPAFYHTY-----DYQNGSK-VGVIKLNTKFASKLGTERVDNTLQP 655
Query: 434 PYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLG 492
+MPM+ P WT ++ G Y S V++ + +Q + A + +++ V +ALN LG
Sbjct: 656 HFMPMIAKPRPWTTHNDGGYYLKKSAVLKAKNSPEQAAYARTAAIKGKMDTVLQALNNLG 715
Query: 493 STKWRVNKRVLSVIDQIWAKGGGLADLVD-RKDVPLPEELDTEDE-AEIRKWKWSVKNVR 550
ST W VNK VL V+ Q+W G D+ R+ + LP + T+ E K K + +
Sbjct: 716 STAWTVNKEVLKVMIQVWNTGEEFLDIPKFRETLNLPPQPSTDASLEEFFKHKRKCQLIC 775
Query: 551 KENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 610
+E ++ S RCD KL +AR E Y+PH+LDFRGRAYPM PY NHLG+DL RG+L
Sbjct: 776 REFSKDRSMRCDTNYKLEIARAYVGE-RIYFPHSLDFRGRAYPMPPYFNHLGNDLSRGLL 834
Query: 611 EFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRW 670
+F G+ LG+ GL WLKIH+ NL G DKL + R+ + ++HLD+IF+SA PL G R
Sbjct: 835 KFWNGKQLGEEGLRWLKIHVCNLM--GFDKLSLNDRVKYVDDHLDEIFESARDPLGGSRM 892
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
W+ A+ P+Q LA+ + L A R P P +SH PVHQDG+CNGLQHYAALG D GA V
Sbjct: 893 WVNADKPWQFLASAMELERAYRLPDPTQFISHQPVHQDGTCNGLQHYAALGGDIEGARQV 952
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSV 790
NL+ D+P+DVY+ +A V + ++ D E + A+ + + + RKLVKQTVMTSV
Sbjct: 953 NLVPADKPSDVYTHVAHLVEKSVQEDLEAGSE------EAKLVKDVISRKLVKQTVMTSV 1006
Query: 791 YGVTYIGARDQIKRRLKERCAIEDDAQLFGASC-YAAKTTLTALQEMFEAARSIMGWLGD 849
YGVTY+GAR QI +RLK+ IE D + S Y + A++E+F+ A +I WL
Sbjct: 1007 YGVTYVGARAQITKRLKD---IEFDEKYISMSSKYLTQKVFKAIRELFDNAHAIQDWLII 1063
Query: 850 CAK 852
AK
Sbjct: 1064 AAK 1066
>H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_1488 PE=3 SV=1
Length = 1351
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 337/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E +R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEME---FR 547
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
+ K +++A + +S P K Q A
Sbjct: 548 SEQVLKSESQAFRDVNKKS---PEFKKLV----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L++Q + V P +PMLV P W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W KG G D+ +D V P D +R WK VK + + + S RCD KL
Sbjct: 748 WNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGE-KLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL R+AFTE+HL DI DSA PL G RWW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + +R + K + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVTKKIRNCSRKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K +A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAK 1081
>B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) OS=Laccaria
bicolor (strain S238N-H82 / ATCC MYA-4686)
GN=LACBIDRAFT_248757 PE=3 SV=1
Length = 960
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 250/723 (34%), Positives = 375/723 (51%), Gaps = 77/723 (10%)
Query: 159 RQIKMETEAWEDA---AREYQELLEDM---RKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
RQ +ET +E A +E E LE + + +L + ++S W + L++ + +E
Sbjct: 1 RQKHLETSVYEIARERMKEEHEYLESLGINAENRLKDST--LQSWMWQWHQNLKSRLESE 58
Query: 213 QELCKDTRLRLTH---------GPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVV 262
+L ++ + PY + AD ++ IT+ +LM L + GV K
Sbjct: 59 IKLIAAFEAKMLNRHDQTTQLLSPYLALVKADRLSYITILELMRL--QGSGGVNHGMKTT 116
Query: 263 QGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXX 322
+ IG+A+E E + C P G
Sbjct: 117 RALIAIGKAVEMEYK--------------AQMCRTNDIAIPTMTGHSTNFFSVLGYSNLQ 162
Query: 323 XXXXXXXXXXXXQKNQQALGIVRGRDDWK-PWGQEAQVKVGSCLMQLLIDTAYI--QPPA 379
++ A ++ + W PW Q + K+G L++ L+D AY+ Q
Sbjct: 163 ------------KRRMAAARHMQDGEAWTTPWSQAVRSKIGGILVECLMDVAYVRRQRDD 210
Query: 380 NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKS-ARHMVIP-YMP 437
G + +PAF H + + G+K G+++ + V + L R + P ++P
Sbjct: 211 QVTGKSVTEDQPAFYHAYEYV-----RGTK-LGILKLNPAVAERLSTDRLRETIHPRHLP 264
Query: 438 MLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRA-PVTQLNPVFEALNTLGSTKW 496
MLVPP W +G YL+ + VMR + +Q +++A ++ V L+ LGST W
Sbjct: 265 MLVPPKPWMHIRQGGYLYNKTSVMRFKESIEQETYLQKAIDDGKMELVLAGLDVLGSTPW 324
Query: 497 RVNKRVLSVIDQIWAKGGGLADL----VDRKDVPLPEELDTEDEA-EIRKWKWSVKNVRK 551
R+NK V V+ ++W G + + D+ +PE + + +A + + K
Sbjct: 325 RINKNVYEVVLKVWNSGERMGKIPPAVYDQPAPEIPENYEKDLQARSVHLQRQKSYTQGK 384
Query: 552 ENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 611
NN HS+RC++ K+ +AR D Y PHNLDFRGRAYP+ P+L+H+G DLCRG+L
Sbjct: 385 ANN--HSERCNVNYKIEIARAFL-HDELYMPHNLDFRGRAYPIPPHLSHIGDDLCRGLLL 441
Query: 612 FGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWW 671
F + +PLG+ GL WLKIHLANLY G DK + R + LDDI DSA PL+GKRWW
Sbjct: 442 FADAKPLGERGLWWLKIHLANLY--GYDKASFQERADWVMERLDDIADSATNPLDGKRWW 499
Query: 672 LEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVN 731
+ +DP+Q LAAC+ L AL+S P MS +PVHQDG+CNGLQHYAALG D +GA VN
Sbjct: 500 TKGDDPWQVLAACMELHAALQSEDPLAYMSTLPVHQDGTCNGLQHYAALGGDAVGAKQVN 559
Query: 732 LIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALH-ARNLINQVDRKLVKQTVMTSV 790
L GD+P+DVYS + V + + DA N L A+ L ++ RK+VKQTVMT+V
Sbjct: 560 LAAGDRPSDVYSYVGRLVDQQIEADA-------ANGLEMAKLLQGKITRKVVKQTVMTTV 612
Query: 791 YGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
YGVT++GAR+QI+++LK+R I D+ + A+ Y AK LT + + F A+ I WL C
Sbjct: 613 YGVTFVGAREQIEKQLKDRHDIPDEL-CWTAASYLAKKVLTCIGDTFTGAKHIQNWLNLC 671
Query: 851 AKV 853
A++
Sbjct: 672 ARL 674
>G9MXM1_HYPVG (tr|G9MXM1) DNA-directed RNA polymerase OS=Hypocrea virens (strain
Gv29-8 / FGSC 10586) GN=TRIVIDRAFT_171102 PE=3 SV=1
Length = 1317
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/520 (41%), Positives = 306/520 (58%), Gaps = 45/520 (8%)
Query: 351 KPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPD------IRPAFKHTLKNISTDS 404
+PW + + +VGS L+Q+LI++A + N + +G +PAF H T
Sbjct: 467 EPWSIQIKAQVGSILLQMLIESAKV----NVVAEGSTSKELISQYQPAFNH-----QTLL 517
Query: 405 QNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH 464
+ G K + LV+Q + + ++PM+V P WT + +G +L + ++R+
Sbjct: 518 RKGKKVGALFFNTHLVEQLKREPMGDFIAKHLPMVVEPKPWTSFSEGGFLDSKTSLVRVK 577
Query: 465 -GAKQQR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL 519
G +Q+ A+KR +TQ VF+ L+ LG T W +NK L+V+ + W G +AD+
Sbjct: 578 PGDVEQKLYSNAAIKRGDMTQ---VFKGLDILGKTAWIINKDTLNVMMEAWNSGEEIADI 634
Query: 520 VD-RKDVPLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDED 577
+ P E D+ + +RK W +VK + E + HSQRC + L+L +AR +++
Sbjct: 635 PPLNPKLEAPTEPDSSADPLVRKNWIRAVKAIENERSGLHSQRCFMNLQLEIARAFRNQT 694
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
Y+PHN+D+RGRAYPM YLNH+G+D R IL+F +G+ LG GL WLKIHLAN+Y G
Sbjct: 695 -IYFPHNVDYRGRAYPMPTYLNHMGADHARAILKFAKGKELGVRGLRWLKIHLANVY--G 751
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
+DK +D R AF++ ++ +I DSA PL G RWWL+ EDP+QCL+AC L AL P P
Sbjct: 752 LDKASFDEREAFSDENVANIIDSATNPLGGSRWWLKGEDPWQCLSACFELKAALELPDPT 811
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
+SH+PVHQDG+CNGLQHYAALG D GA VNL G++PADVYS +A+ V E + +D
Sbjct: 812 KFISHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGERPADVYSAVASLVKEAIAKDM 871
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR-------LKERC 810
EK NA A+ L ++ RK+VKQTVMT+VYGVT+ GA+ QI ++ L + C
Sbjct: 872 EKG-----NAF-AQALNGKITRKVVKQTVMTNVYGVTFAGAKKQICKQIDALYPNLGKEC 925
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
I + S Y AK AL MF A I WLG+
Sbjct: 926 GIPN----ILLSTYIAKQVFQALATMFRGAHDIQYWLGEI 961
>C6HMP3_AJECH (tr|C6HMP3) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H143) GN=HCDG_07359 PE=3 SV=1
Length = 1265
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/517 (40%), Positives = 300/517 (58%), Gaps = 22/517 (4%)
Query: 343 IVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLK 398
I R +P W Q K+G+CL +L+ TA + P + + AF+ +
Sbjct: 421 IARFEQSQRPVDWSPVVQAKIGACLASMLLSTATVPVPTKDPKTNQQKQTDQAAFRRVYQ 480
Query: 399 NISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPS 458
+ G + V D +V++ + ++ ++PM+ PP WT G +L PS
Sbjct: 481 -----LERGFRVGYVHANDYIVEKLRREPLGELLAKHLPMVCPPRPWTSARGGGFLEYPS 535
Query: 459 YVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR+ G Q V+ A L+ VF L LG T W++N+ VL+V+ + W G +
Sbjct: 536 TVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVMLEAWNSGEEI 595
Query: 517 ADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
A+L + ++ PE+ DT+D ++ + + + HSQRC +L +AR ++
Sbjct: 596 ANLAPENPNIIEPEKPDTDDRDILKDYYRARMHATNARTGYHSQRCFQNFQLEIARAYRN 655
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +GR LG SGL WLKIHLAN++
Sbjct: 656 E-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRWLKIHLANVF- 713
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F +HL+DI DSA L+GKRWWL+A DPFQCLAACI L A+
Sbjct: 714 -GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACIELTNAMALED 772
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P +SH+PVHQDGSCNGLQHYAALG D +GA VNL D+P+D+Y+G+A V + +++
Sbjct: 773 PTKYVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGVAEHVKQSIQK 832
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
DA K +T A+ L +++ RK+VKQTVMT+VYGVT++GA Q++++L +
Sbjct: 833 DAAKGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQLVDHYPDLLH 886
Query: 816 AQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ + G + Y A+ AL MF A I WLGDCA
Sbjct: 887 SGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 923
>C0NPG4_AJECG (tr|C0NPG4) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)
GN=HCBG_05044 PE=3 SV=1
Length = 1397
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/517 (40%), Positives = 300/517 (58%), Gaps = 22/517 (4%)
Query: 343 IVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYIQPPAN--QIGDGPPDIRPAFKHTLK 398
I R +P W Q K+G+CL +L+ TA + P + + AF+ +
Sbjct: 534 IARFEQSQRPVDWSPVVQAKIGACLASMLLSTATVPVPTKDPKTNHQKQTDQAAFRRVYQ 593
Query: 399 NISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPS 458
+ G + V D +V++ + ++ ++PM+ PP WT G +L PS
Sbjct: 594 -----LERGFRVGYVHANDYIVEKLRREPLGELLAKHLPMVCPPRPWTSARGGGFLEYPS 648
Query: 459 YVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR+ G Q V+ A L+ VF L LG T W++N+ VL+V+ + W G +
Sbjct: 649 TVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVMLEAWNSGEEI 708
Query: 517 ADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
A+L + ++ PE+ DT+D ++ + + + HSQRC +L +AR ++
Sbjct: 709 ANLAPENPNIIEPEKPDTDDRDILKDYYRAKMHATNARTGYHSQRCFQNFQLEIARAYRN 768
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +GR LG SGL WLKIHLAN++
Sbjct: 769 E-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRWLKIHLANVF- 826
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F +HL+DI DSA L+GKRWWL+A DPFQCLAACI L A+
Sbjct: 827 -GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACIELTNAMALED 885
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P +SH+PVHQDGSCNGLQHYAALG D +GA VNL D+P+D+Y+G+A V + +++
Sbjct: 886 PTKFVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGVAEHVKQSIQK 945
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
DA K +T A+ L +++ RK+VKQTVMT+VYGVT++GA Q++++L +
Sbjct: 946 DAAKGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQLVDHYPDLLH 999
Query: 816 AQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ + G + Y A+ AL MF A I WLGDCA
Sbjct: 1000 SGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 1036
>Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D05247g PE=3 SV=1
Length = 1263
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/679 (34%), Positives = 357/679 (52%), Gaps = 84/679 (12%)
Query: 201 WFEPLRNAIVAEQELCKD------------TRLRLTHGPYFNELPADMMAVITMHKLMGL 248
W++ + + E LC+D RL +GPY + + M VIT+ +L+ L
Sbjct: 374 WYQQMLPVVRQEVALCQDLLEKEQKAPNKQNSDRLKYGPYLLLVEPEKMCVITILELLKL 433
Query: 249 LMTN--TNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKK 306
+ T G+ +A+ V +G +IE E R + + K K + E +
Sbjct: 434 QSSGGVTEGMRTARAVLS---VGRSIEMEFRSEKLLRSENKMFKEVNKRSHEFKM----- 485
Query: 307 GXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLM 366
Q + AL + ++ W + + K+GS L+
Sbjct: 486 --------------------------FVQNAKTALRNMHVEENMIQWPSDVKAKIGSILI 519
Query: 367 QLLIDTAYI-----QPPANQ--IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD-S 418
+LI + + P + +G+ P AF HT + ++G+K G+++ S
Sbjct: 520 SMLIHVSKVTVEGVDPITKEKVVGEAP-----AFCHTFQ-----YRSGTK-IGILKIHRS 568
Query: 419 LVQQ-GLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAP 477
LV Q E+ ++ ++PMLV P WT ++ G Y + S ++R + +Q +K
Sbjct: 569 LVNQLSAERMTTNIQPQHLPMLVRPRPWTNWNSGGYNYSQSTLIRSRDSPEQIAYIKAVS 628
Query: 478 VT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL---VDRKDVPLPEELDT 533
++ V+E LN LG+T W +N+++ +++ ++W G G D+ +D + P P+ +
Sbjct: 629 EQGSIDNVYEGLNVLGNTPWTINEKLFNIVSEVWNTGEGFLDIPPVLDNFEFP-PQPARS 687
Query: 534 EDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYP 593
ED +++W+ + + E S RCD KL +AR E FY+PHN+DFRGRAYP
Sbjct: 688 EDPLILKEWRNKCRQMSNEFKGFKSYRCDSNYKLEIARAFLGE-KFYFPHNMDFRGRAYP 746
Query: 594 MHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENH 653
+ P+ NHLG+D+ R +L F G+ LG SGL WLKIHLANLY G+DK ++ R+ F + H
Sbjct: 747 LAPHFNHLGNDMTRSLLIFWNGKKLGTSGLQWLKIHLANLY--GMDKCSFEERVEFADTH 804
Query: 654 LDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNG 713
L +I +SA PL+G RWW +A+ P+Q LA CI L EAL+ PE +SH PVHQDG+CNG
Sbjct: 805 LKEIRESAEHPLDGTRWWTKADKPWQFLATCIELNEALKLDNPENFISHQPVHQDGTCNG 864
Query: 714 LQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNL 773
LQHYAALG D GA VNL+ D+P DVY+ +A V + + A + A L
Sbjct: 865 LQHYAALGGDIEGARQVNLVPSDRPQDVYAFVAKLVTKRLENSAAAGDE------QAAIL 918
Query: 774 INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTAL 833
+ + RK+VK+TVMT+VYGVT++GA DQI + L + +++ S Y AK ++
Sbjct: 919 KDLISRKVVKRTVMTNVYGVTFVGAADQIMKELDQYFDKPEESN--ELSRYLAKHVFASI 976
Query: 834 QEMFEAARSIMGWLGDCAK 852
+E+F AA I WLG+CAK
Sbjct: 977 RELFHAAHLIQDWLGECAK 995
>M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_57977 PE=3 SV=1
Length = 966
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 246/723 (34%), Positives = 380/723 (52%), Gaps = 76/723 (10%)
Query: 159 RQIKMETEAWEDAAREYQ---ELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQE- 214
RQ +E ++ A ++ + ++LE++ ++S GW + L+ + AE E
Sbjct: 8 RQKLLEDSVYDVAVKQMEHQAQMLEELGLNNRGLKQADLQSWMWGWHQKLQKRLQAEIEN 67
Query: 215 LCKDTR--------LRLTHGPYFNELPADMMAVITMHKLMGLLMTN--TNGVGSAKVVQG 264
L ++ R ++ + P+ L + +++IT+ +LM L T ++G+ +A+ + G
Sbjct: 68 LVEEERKLGGKYQGVKTSLSPFLTLLKPEKLSLITILELMNLHGTGGVSDGMKTARALLG 127
Query: 265 ASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXX 324
+G A+E +E + K + +S A
Sbjct: 128 ---VGRAVE--------LEHKAQMCKKNNIAIPQSQFA----------------RQDTSL 160
Query: 325 XXXXXXXXXXQKNQQALGIVRGRDDWKP-WGQEAQVKVGSCLMQLLIDTAYI-----QPP 378
+ A + +DW W Q +VKVG L+ L+D A I P
Sbjct: 161 FTRLGYRDLQARRVAARKYMEDAEDWTSDWSQLVRVKVGGFLVDCLMDVATITRSMTDPN 220
Query: 379 ANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKS-ARHMVIP-YM 436
+I + +PAF H+ + + + GVI+ + +V + + K ++ + P ++
Sbjct: 221 GEEIYS---EEQPAFFHSYEYVR------GHKLGVIKLNPVVAERMAKDRIKNTLHPRHL 271
Query: 437 PMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTK 495
PMLV P W G D+G Y++ + MR + +Q + ++ A L V+ AL+ LGST
Sbjct: 272 PMLVKPKPWLGPDQGGYMYNRTTAMRYKDSVEQANYLRHASAAGNLELVYAALDVLGSTP 331
Query: 496 WRVNKRVLSVIDQIWAKGGGLADLVDR-KDVP---LPEELDTEDEAE-IRKWKWSVKNVR 550
W +N+R+ ++ +W G + + D+P PE +T+ +A I + + +
Sbjct: 332 WNINRRIFDIVLTVWNSGKRMCKMPPVVSDIPEPERPENYETDQQARAIYLQRHKLYAQQ 391
Query: 551 KENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 610
K NN HS RC + K+ +AR D + PHN+DFRGRAYP+ P+L+H+G DL RG+L
Sbjct: 392 KANN--HSDRCSVNYKIEIARAFLG-DTIFMPHNVDFRGRAYPVPPHLSHIGDDLSRGLL 448
Query: 611 EFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRW 670
FGE +PLG+ G WLK+HLANLY G DK + RIAF E HLDDIFDS + PL+G+ W
Sbjct: 449 LFGEAKPLGERGFWWLKVHLANLY--GYDKGSFPERIAFVEAHLDDIFDSVDHPLDGRMW 506
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
W +A+DP+QCLA C+ L A+ S P +P+HQDG+CNGLQHYAALG D GAA V
Sbjct: 507 WTKADDPWQCLATCMELKAAIESGDPHKYECALPIHQDGTCNGLQHYAALGGDTQGAAQV 566
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSV 790
NL D+P+DVY+ +A V +R D K K A L +V RK+VKQTVMT+V
Sbjct: 567 NLAVTDRPSDVYTYVADMVEGRIREDVAKGDKV------AMLLQGKVARKVVKQTVMTTV 620
Query: 791 YGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
YGVTYIGAR QI+++L R I + + + AS Y AK L ++ ++F A+ I W C
Sbjct: 621 YGVTYIGARAQIEKQLASRGDIPAE-ECWAASSYLAKHVLGSIGDLFRGAKDIQLWFTSC 679
Query: 851 AKV 853
A++
Sbjct: 680 ARL 682
>A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_01030 PE=3 SV=1
Length = 1397
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/517 (40%), Positives = 299/517 (57%), Gaps = 22/517 (4%)
Query: 343 IVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYIQPPA--NQIGDGPPDIRPAFKHTLK 398
I R +P W Q K+G+CL +L+ TA + P + + AF+ +
Sbjct: 534 IARFEQSQRPVDWSPVVQAKIGACLASMLLSTATVPVPTKDQKTNQQKQTDQAAFRRVYQ 593
Query: 399 NISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPS 458
+ G + V D ++++ + ++ ++PM+ PP WT G +L PS
Sbjct: 594 -----LERGFRVGYVHANDYIIEKLRREPLGELLAKHLPMVCPPRPWTSSRGGGFLEYPS 648
Query: 459 YVMRI-HGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGL 516
VMR+ G Q V+ A L+ VF L LG T W++N+ VL+V+ + W G +
Sbjct: 649 TVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVMLEAWNSGEEI 708
Query: 517 ADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKD 575
A+L + ++ PE+ DT+D ++ + + + HSQRC +L +AR ++
Sbjct: 709 ANLAPENPNIIEPEKPDTDDRDILKDYYRAKMHATNARTGYHSQRCFQNFQLEIARAYRN 768
Query: 576 EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYA 635
E FY PHNLDFRGRAYPM PY N +G+D CRG+L F +GR LG SGL WLKIHLAN++
Sbjct: 769 E-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRWLKIHLANVF- 826
Query: 636 GGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPT 695
G DK + R F +HL+DI DSA L+GKRWWL+A DPFQCLAACI L A+
Sbjct: 827 -GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACIELTNAMALED 885
Query: 696 PETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRR 755
P +SH+PVHQDGSCNGLQHYAALG D +GA VNL D+P+D+Y+G+A V + +++
Sbjct: 886 PTKFVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGVAEHVKQSIQK 945
Query: 756 DAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD 815
DA +T A+ L +++ RK+VKQTVMT+VYGVT++GA Q++++L +
Sbjct: 946 DAANGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQLVDHYPDLLH 999
Query: 816 AQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ + G + Y A+ AL MF A I WLGDCA
Sbjct: 1000 SGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 1036
>A8NIS4_COPC7 (tr|A8NIS4) DNA-directed RNA polymerase OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=CC1G_11031 PE=3 SV=2
Length = 1341
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 361/695 (51%), Gaps = 95/695 (13%)
Query: 194 MKSLFLGWFEPLRNAI------VAEQELCKDTRLR--LTHGPYFNELPADMMAVITMHKL 245
++ + GW E L+ + + ++E RL+ PY + + +++IT+ L
Sbjct: 383 LQEMMYGWHEKLKKRVAELVSQIEKEEAAGKYRLKPKAELAPYLALVQPERLSMITI--L 440
Query: 246 MGLLMTNTNGVGSA-KVVQGASQIGEAIEHE--ARIYR-----FMEKTKKKTKATDNCEG 297
+ + + GV S K + IG+A+E E AR+ R + ++ T+ + G
Sbjct: 441 EAMRLCGSGGVASGMKSTRALVSIGKAVEMEYKARVCRKNRIVIPDVSRPDTQDVFSSLG 500
Query: 298 ESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK-PWGQE 356
S+L ++ A + + W PW Q
Sbjct: 501 YSNL--------------------------------HERRLAAAKQMTAGESWTAPWSQT 528
Query: 357 AQVKVGSCLMQLLIDTAYIQPPA--NQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVI 414
+ ++G+ LM++L+ A + A + G+ + PAF H S + G+K GVI
Sbjct: 529 TRAQIGALLMEVLMQVATVPQTAVNEETGEVLTEEHPAFFH-----SYEYMRGTK-LGVI 582
Query: 415 ECDSLVQQGLEKSARHMVIP--YMPMLVPPNNWTGYDKGAYLFLPSYVMR----IHGAKQ 468
+ + V + + K I ++PML PP W ++G YL+ + +MR + K
Sbjct: 583 KVNHAVSERIAKDVLKGTIHPRHLPMLHPPKPWVRANEGGYLYTKTPLMRYKECVEQEKY 642
Query: 469 QRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLP 528
+A+++ + V LN LG T W++NK++ V+ IW G G+ L K
Sbjct: 643 LHEAIRKG---NMEAVMAGLNVLGRTPWKINKKIFDVVLTIWNSGEGVGKLPPAKLDEPE 699
Query: 529 EELDTEDEAEIR----------KWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDG 578
+ E E ++R +W +V N HS+RC K+ +AR DE
Sbjct: 700 PQPPPEGENDVRARAIYLQHHKQWSQNVAN-------NHSERCSTNYKIEIARAFLDET- 751
Query: 579 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGV 638
Y+PHNLDFRGRAYP+ P+LNH+G DL RG+L F E +PLG+ GL W+KIHLANLY G
Sbjct: 752 IYFPHNLDFRGRAYPLPPHLNHIGDDLSRGLLLFQEAKPLGERGLRWMKIHLANLY--GF 809
Query: 639 DKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPET 698
DK +D R+ + + LDDI DSA PL G+ WW +A+DPFQCLA C+ L EAL SP P
Sbjct: 810 DKADFDERVHWVHDRLDDIKDSAKNPLTGRGWWKKADDPFQCLATCMELTEALESPDPLA 869
Query: 699 TMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE 758
S +PVHQDG+CNGLQHYAA+G D GA VNL D+P+DVY+ + +V +++ DA
Sbjct: 870 YKSCLPVHQDGTCNGLQHYAAMGGDAQGAQQVNLAASDRPSDVYTFVGNKVDKLVNEDAA 929
Query: 759 KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQL 818
K + A+ L ++ RK+VKQTVMT+VYGVT++GARDQI+ +L +R I + +
Sbjct: 930 KGDRL------AQLLQGKITRKVVKQTVMTTVYGVTFVGARDQIEGQLIDRGDIPLE-EC 982
Query: 819 FGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+ + Y AK L + + F ARSI WL CA++
Sbjct: 983 WNVAGYLAKKVLHCIGDTFHGARSIQNWLNLCARL 1017
>Q2H1K6_CHAGB (tr|Q2H1K6) DNA-directed RNA polymerase OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=CHGG_04340 PE=3 SV=1
Length = 1414
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/512 (40%), Positives = 307/512 (59%), Gaps = 33/512 (6%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYI--QPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKR 410
W + KVG+ L+ L+DTA I Q + + +PAF H ++ ++
Sbjct: 573 WPMLIKAKVGAVLLAALMDTAKIVVQREHPETKEKLSQTQPAFTHAVQ------LKKGRK 626
Query: 411 YGVIECDSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHG-AKQ 468
GVI+ + + + +++ R + ++PM+V P W+ +DKG ++ P+ ++R+ K
Sbjct: 627 IGVIQPNRELIELMKREPRGEALARHLPMVVEPVPWSKFDKGGFISAPTPLIRLKNHEKD 686
Query: 469 QR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL--VDR 522
QR A++R + Q+ L+ LG T W++N+ V V+ + W G A+L +D
Sbjct: 687 QRIYAEAAIERGDMEQM---MRGLDVLGKTAWKINRPVFDVMLEAWNTGEEFANLPALDP 743
Query: 523 KDVPLPEELD-TEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYY 581
K +P+P E D T+D + R W SVK E + HS RC + +L +AR +D+ FY+
Sbjct: 744 K-IPIPAEPDSTDDPMKKRVWLRSVKAAENEKSGLHSVRCFMNFQLEIARAFRDQT-FYF 801
Query: 582 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKL 641
PHN+DFRGRAYPM YLNH+G+D RG+L F +G+PLG+ GL WLK+ L+N+Y G DK
Sbjct: 802 PHNIDFRGRAYPMPTYLNHMGADHMRGLLLFAKGKPLGEKGLAWLKVQLSNVY--GFDKA 859
Query: 642 CYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMS 701
R F N+L++IFDSA+ PL GKRWWL+AEDP+QCL AC L AL SP P +S
Sbjct: 860 SLQEREDFATNNLENIFDSADNPLTGKRWWLQAEDPWQCLGACFELKAALSSPDPAAYVS 919
Query: 702 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDP 761
H+PVHQDG+CNGLQHYAALG D GA VNL+ G++PADVY+ +A V E ++++ +
Sbjct: 920 HLPVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGERPADVYAAVAQLVQEEVKQELAEGN 979
Query: 762 KTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA-IEDDAQLFG 820
+ A+ + +++RK+VKQTVMT+VYGVT++GA+ Q++++L IE + L
Sbjct: 980 E------FAKAVDGKINRKVVKQTVMTNVYGVTFVGAKKQVQKQLDSIYPNIEQETGLSS 1033
Query: 821 A--SCYAAKTTLTALQEMFEAARSIMGWLGDC 850
+ Y A T L MF A I WLG+
Sbjct: 1034 TVLASYLAGKVFTGLSTMFRGAHDIQNWLGEI 1065
>G2XCS8_VERDV (tr|G2XCS8) DNA-directed RNA polymerase OS=Verticillium dahliae
(strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)
GN=VDAG_07960 PE=3 SV=1
Length = 1409
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 296/514 (57%), Gaps = 37/514 (7%)
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP------PDIRPAFKHTLKNISTDSQ 405
PW + KV + L+ LIDTA I+ + + P +PAF H +T +
Sbjct: 542 PWPVAVKAKVAAALLSALIDTAKIK----VVKEHPETKTLISQYQPAFSH-----ATQLR 592
Query: 406 NGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRI-H 464
G K V+ LV + + ++PM+V P W+ +DKG +L S ++R+ H
Sbjct: 593 RGKKIGMVLLNKELVNIMKREPQGDFLAKHLPMVVKPEPWSKFDKGGFLESTSNLVRVKH 652
Query: 465 GAKQQR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL- 519
G K QR A+ R + Q +F+ L+ LG T WR+N +L V+ W G LA++
Sbjct: 653 GDKDQRIYTEAAIARGDMDQ---IFKGLDVLGQTAWRINAPILEVMLAAWNSGTALANIP 709
Query: 520 VDRKDVPLPEE-LDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDG 578
DV +P E +ED E R W +VK E HS RC + +L +AR +++
Sbjct: 710 ALNPDVHVPTEPAASEDPTERRLWLRAVKAAENERGGLHSVRCFMNFQLEIARAFRNQT- 768
Query: 579 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGV 638
FY+PHN+DFRGRAYP+ YLNH+G+D RG+L F +G+ LG+ GL WLK+HLAN+Y G
Sbjct: 769 FYFPHNIDFRGRAYPLPTYLNHMGADHVRGLLRFADGKELGEKGLKWLKVHLANVY--GF 826
Query: 639 DKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPET 698
DK R +F ++L +IFDSA+KP+EG RWWL+AEDP+QCLAAC L AL SP P
Sbjct: 827 DKASLRDRESFAMDNLVNIFDSASKPMEGNRWWLKAEDPWQCLAACFELKAALESPEPTK 886
Query: 699 TMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE 758
+SH+PVHQDG+CNGLQHYAALG D GA VNL GD+PADVYS +A V + + +D E
Sbjct: 887 FVSHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGDKPADVYSAVANIVKDYIAKDLE 946
Query: 759 KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE---RCAIEDD 815
+ NP A+ ++ RK+VKQTVMT+VYGVT+ GA+ Q+ ++L IE
Sbjct: 947 TN---NPFAIAVN---GKITRKVVKQTVMTNVYGVTFQGAKKQVLKQLDAIYPNLPIESG 1000
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGD 849
+ Y A AL MF A I WLG+
Sbjct: 1001 ISSMMLASYIATLIFKALSSMFRGAHDIQYWLGE 1034
>L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletotrichum
gloeosporioides (strain Nara gc5) GN=CGGC5_14389 PE=3
SV=1
Length = 1383
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 297/517 (57%), Gaps = 41/517 (7%)
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYI-----QPPANQIGDGPPDIRPAFKHTLKNISTDSQN 406
PW +VK+G+ L+ L++TA I QP + +PAF H L+
Sbjct: 541 PWPVAVKVKLGAMLLTALLETAKIKVVQEQPVTQTLIH---QYQPAFSHALR------LK 591
Query: 407 GSKRYGVIECDSLVQQGLEKSAR-HMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHG 465
K+ G+I + + ++ R + ++PM+VPP WT ++KG +L S V+R+
Sbjct: 592 RGKKIGMILLNKTLVTIMKSEPRGDYLAKHLPMVVPPEPWTDFNKGGFLESSSAVVRVKQ 651
Query: 466 AKQQRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD-R 522
+++ A +T+ ++ VF+ L+ LG T WR+N V +V+ + W G A+ +
Sbjct: 652 GDKEQKLYAEAAITRGDMDQVFKGLDILGKTAWRINTPVFNVMLEAWNTGKAFANFPELS 711
Query: 523 KDVPLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYY 581
D+ P E + D+ R+ W +VK + + HSQRC + +L +AR +++ FY+
Sbjct: 712 PDIAYPPEPELSDDPMARRNWIRTVKAIENKKGALHSQRCFMNFQLEIARAFRNQ-SFYF 770
Query: 582 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKL 641
PHN+DFRGRAYP+ YLNH+G+D RG+L F +G+ LG+ GL WLK+HLAN+Y G DK
Sbjct: 771 PHNVDFRGRAYPLPTYLNHMGADHVRGLLRFAKGKELGERGLQWLKVHLANVY--GFDKA 828
Query: 642 CYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMS 701
R +F +L +IFDSAN PL G WWL+AEDP+QCLA C L AL SP P +S
Sbjct: 829 SLKDRESFAMENLVNIFDSANNPLTGNMWWLKAEDPWQCLATCYELKAALESPEPTKYVS 888
Query: 702 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE-KD 760
H+PVHQDG+CNGLQHYAALG D GA VNL D+PADVYS +A V + + +D E K
Sbjct: 889 HLPVHQDGTCNGLQHYAALGGDTWGAEQVNLAPSDKPADVYSAVANIVKDHIAKDVEVKH 948
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR-------LKERCAIE 813
P A L ++ RK+VKQTVMT+VYGVT+ GAR QI ++ L+E +
Sbjct: 949 PI-------AMGLNGKITRKVVKQTVMTNVYGVTFAGARKQICKQLDALYPELREETGVN 1001
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
+ ++ Y A AL MF+ A I WLG+
Sbjct: 1002 N----LTSATYIAGLVFKALSTMFKGAHDIQYWLGEI 1034
>D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber melanosporum (strain
Mel28) GN=GSTUM_00011240001 PE=3 SV=1
Length = 1416
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 255/724 (35%), Positives = 377/724 (52%), Gaps = 76/724 (10%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK 217
+RQ +E A++ A ++ E + ++ + + SL W + L I E + +
Sbjct: 354 ERQKLLEEHAFDSARERWKRDFESLSERGVIKQDAEINSLLWEWHQALVPLIHEELKRVQ 413
Query: 218 DTRL----------RLTHGPYFNELPADMMAVITMHKLMGLLMTNT-NGVGSA-KVVQGA 265
R +GP+ + + +A IT ++ LL T+T NGVG+ K +
Sbjct: 414 HAEESGTKAAGAVDRCFYGPFMRVIEPEKLAAIT---IIELLRTHTLNGVGAGLKASRAV 470
Query: 266 SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXX 325
Q+G +E E Y+ E K++ GE A + K
Sbjct: 471 LQLGREVELE---YQAQEVAKQR--------GEGFFANMSKAELETIFRDRSAFRNLI-- 517
Query: 326 XXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG-- 383
K++ A + ++ W +VK+G L+ +LI A I A G
Sbjct: 518 ---------SKSKSASDL--DFEEIPEWPNTVKVKLGGVLISMLIHVARIPVEAAVPGLT 566
Query: 384 DGPPDIR------PAFKHTLKNISTDSQNGSKRYGVIECD-SLVQQ-GLEKSARHMVIPY 435
+G PAF+H + Q G ++ GV++ LV++ G + +
Sbjct: 567 EGTESSEKIVQHLPAFQHCY-----EYQRG-RKLGVVKLHPELVKRLGTDDLNFTAIGKS 620
Query: 436 MPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGST 494
+PM+V P WT +D+G Y + S V+RI + +QR VK A L+ +F L+ LG T
Sbjct: 621 LPMVVRPLPWTDWDEGGYFYTRSKVVRIRESVEQRQYVKAAAERGHLDHLFAGLDVLGRT 680
Query: 495 KWRVNKRVLSVIDQIWAKGGGLADL-VDRKDVPLPEELDTEDEAEIRKWKWS--VKNVRK 551
WR+N+RV V+ ++W + A + D+ P E + + ++R W+W+ +K V
Sbjct: 681 AWRINRRVFDVVLEVWNQEKAFAKIPALNPDINFPLEPEPNADPKVR-WEWAREMKRVNT 739
Query: 552 ENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 611
HS RCD+ K+ +AR E+ FY+PHN+DFRGRAYP+ P LNH+G+DL RG+L
Sbjct: 740 ARKNNHSTRCDVNFKVEIARAFLFEE-FYFPHNIDFRGRAYPIPPNLNHIGNDLSRGLLM 798
Query: 612 FGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWW 671
F E + +G++GL W+KIHLANL G DK + R+AFTE ++++I DSA PL G RWW
Sbjct: 799 FSEAKEVGETGLRWMKIHLANL--AGYDKASFSQRVAFTEENIENIHDSAENPLTGNRWW 856
Query: 672 LEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVN 731
L+++DP+Q LA+C L EAL P H+PV QDG+CNGLQHYAALG D GA VN
Sbjct: 857 LKSDDPWQLLASCFALNEALSLNNPHEYKCHIPVAQDGTCNGLQHYAALGGDVAGARQVN 916
Query: 732 LIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN-PNALHARNLINQVDRKLVKQTVMTSV 790
L D P DVY+G+A E+++ E D K P A+ ++L V RK+VKQTVMT+V
Sbjct: 917 LEPSDLPQDVYTGVA----ELVKASVELDAKRGLPAAVALKDL---VTRKVVKQTVMTNV 969
Query: 791 YGVTYIGARDQIKRRLKERCAIE--DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLG 848
YGVT+IGAR+QI+ +LK IE D + S Y K ++QEMF A +I WL
Sbjct: 970 YGVTFIGARNQIENQLK---CIESLDQKDIPALSLYLTKKVFDSIQEMFTGASAIQDWLV 1026
Query: 849 DCAK 852
CAK
Sbjct: 1027 TCAK 1030
>N1QDP6_9PEZI (tr|N1QDP6) DNA/RNA polymerase OS=Mycosphaerella populorum SO2202
GN=SEPMUDRAFT_151582 PE=4 SV=1
Length = 1450
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 253/720 (35%), Positives = 376/720 (52%), Gaps = 68/720 (9%)
Query: 160 QIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAIVAEQELCK 217
Q +ME A + A +Q+ ED+RK + ++ + L W+ L + E E K
Sbjct: 391 QRRMEDTAVDIAVARWQKADEDLRKIGIHTSMQSKPIAGLMWQWYSKLLPLLEEELEEVK 450
Query: 218 DTRLR------LTHGPYFNELPADMMAVITMHKLMGLLMTNTNGV-----GSAKVVQGAS 266
+R L +GPY LP +A T+ +M + + N + K+ A
Sbjct: 451 KAYIRDKGDDCLVYGPYLELLPVKKVAANTILHVMTRMAGDKNTITEQFESETKLGTLAI 510
Query: 267 QIGEAIEHE--ARIY-RFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
+ +A+E E A + + + KK +T N + + ++KG
Sbjct: 511 NLSKALESEWLATVAGKGGKSASKKPHSTANLRRRA-IRALEKGIEKSRPGKSKRK---- 565
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQ-- 381
++ Q AL V W +VK+G+ L+ L++TA Q P +
Sbjct: 566 -----------KEIQAALAQVE-------WPVSVKVKLGAMLVSKLMETA--QLPVTREH 605
Query: 382 --IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD-SLVQQGLEKSARHMVIPYMPM 438
+ ++PAF H +K KR GV + +L+Q+ + ++ MPM
Sbjct: 606 PRTKEQVTQMQPAFMHRMKYYH------GKRVGVFMPNPALIQKIKSEPVGSLLAKRMPM 659
Query: 439 LVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQQRDAVKRAPVTQ-LNPVFEALNTLGSTKW 496
+VPP WTG+ KG YL + ++R+ G K +D A Q L+ +++ L L W
Sbjct: 660 VVPPLPWTGWAKGGYLHYSNPILRLAAGDKSGKDYFMAADEKQDLSTLYKGLTALSKVPW 719
Query: 497 RVNKRVLSVIDQIWAKGGGLADLVD-RKDVPLPEELDTE-DEAEIRKWKWSVKNVRKENN 554
++++ V +V + W G +A+ ++P+P E D+ D + +W+ +++ +
Sbjct: 720 KIHRGVFNVQLEAWNSGEEIANFAPLNPELPVPPEPDSSADPVQRLQWQQKCRDIANSRS 779
Query: 555 ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGE 614
HS+RC +L +AR M +E Y+PHN+DFRGRAYP+ PYLNH+G+D RG+L FGE
Sbjct: 780 GNHSKRCFQNFQLEIARTMLNET-LYFPHNMDFRGRAYPIPPYLNHMGADNVRGLLVFGE 838
Query: 615 GRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEA 674
G+ LG+SGL WLKIH+A + G DK + RI FT HLDDI+DSA PL G+RWWL+A
Sbjct: 839 GKELGESGLRWLKIHMATV--AGYDKASMEERIEFTMQHLDDIYDSAKNPLSGRRWWLQA 896
Query: 675 EDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIG 734
ED +Q LAAC L AL SP P +SH+PV QDG+CNGLQHYAALG DK GAA VNL
Sbjct: 897 EDAWQTLAACFELVAALDSPDPTKYISHLPVQQDGTCNGLQHYAALGGDKAGAAQVNLEP 956
Query: 735 GDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVT 794
D+PADVY+ +A V + +DA+ NP A+ L ++ RK VKQ VMT+VYGVT
Sbjct: 957 SDRPADVYTAVAEAVKAKIAKDAQDG---NPV---AQKLDGRITRKCVKQPVMTNVYGVT 1010
Query: 795 YIGARDQIKRRLK---ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ GAR Q++R+L+ +D L S Y + +L +MF A+ I WLG CA
Sbjct: 1011 FWGARVQVRRQLEAIFTESRHDDPVNLGLMSHYVTQKIFESLGQMFTGAQKIQDWLGQCA 1070
>F7VNT9_SORMK (tr|F7VNT9) DNA-directed RNA polymerase OS=Sordaria macrospora
(strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
GN=SMAC_01041 PE=3 SV=1
Length = 1407
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/509 (38%), Positives = 299/509 (58%), Gaps = 27/509 (5%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYI----QPPANQIGDGPPDIRPAFKHTLKNISTDSQNGS 408
W + KVG+ L+ L+DTA I + PA + +PAF H ++ + G
Sbjct: 539 WTTLIRTKVGAALLSALLDTAKIKLVREDPATKTLVT--QNQPAFSHVMQ-----LRRGK 591
Query: 409 KRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQ 468
K +I ++V + + + ++PM+ P+ W +++GAYL + V+R+ ++
Sbjct: 592 KVGTIIPNKAVVDLLVREPVPDFLARHLPMVTAPDPWVSFERGAYLETKTPVLRLKNGER 651
Query: 469 QRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDV- 525
++ A + + ++ +F+ L+ LG T W++N V V+ ++W G +A++ V
Sbjct: 652 EQKLYTEAAIARGDMDQIFKGLDVLGKTGWKINHPVFKVMLEVWNSGEQVANIPPLNPVF 711
Query: 526 -PLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
E TED R W ++K + E + HSQRC + +L +AR +D+ FY+PHN
Sbjct: 712 EQPAEPASTEDPTIKRSWLKALKAIENERSGLHSQRCFMNFQLEIARAYRDQT-FYFPHN 770
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
+DFRGRAYP+ PYLNH+G+D RG++ F +G+PLG+SGL WLK+HLANLY G DK
Sbjct: 771 VDFRGRAYPIPPYLNHMGADHLRGLMLFSKGKPLGESGLRWLKVHLANLY--GFDKASLQ 828
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R F E +++++ +SA PL G RWWL+AEDP+QCLA C LAEAL P +SH+P
Sbjct: 829 ERQEFAEENIENVRESARNPLNGNRWWLKAEDPWQCLATCFELAEALELEDPTKYVSHLP 888
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDG+CNGLQHYAALG D GA VNL+ G++PADVYS +A V++ + D KD +
Sbjct: 889 VHQDGTCNGLQHYAALGGDTWGAKQVNLVPGERPADVYSAVAKLVIKGIDEDLAKDNE-- 946
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE---RCAIEDDAQLFGA 821
A+ + ++ RK+VKQTVMT+VYGVTY+GA+ Q+ +++ E + A
Sbjct: 947 ----FAKAMHGKITRKVVKQTVMTNVYGVTYVGAKKQVLKQIDAAYPNLMTETGIEPPLA 1002
Query: 822 SCYAAKTTLTALQEMFEAARSIMGWLGDC 850
+ Y + A+ MF+ A I WLG+
Sbjct: 1003 AAYVTQHIFRAMSTMFKGAHDIQNWLGEI 1031
>L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillardia theta CCMP2712
GN=RpoTm PE=3 SV=1
Length = 1194
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 348/643 (54%), Gaps = 76/643 (11%)
Query: 226 GPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKT 285
GP LPA +AVIT+H+L+ L++ V V+ A +GE I+ E + +
Sbjct: 457 GPILMSLPASKIAVITIHELLSSLLSGGGQV---HFVRAARTVGEGIQAELGLEHVKKAK 513
Query: 286 KKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVR 345
+ ++ V+K L +
Sbjct: 514 NRFLLSSRRLSALCKAHDVRK----------------------------------LNKLL 539
Query: 346 GRDDWKP-WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDS 404
R + +P W QVKVG+ L+Q+L+++A + A A H ++ + S
Sbjct: 540 SRLESQPLWDARMQVKVGAKLIQILMNSAKYKGSA------------AVTHVVQ--AQMS 585
Query: 405 QNGSKRYGVIECDSLVQQGLEKS----ARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYV 460
G ++ G + D + Q LEK A H + +PM++ P W +D G Y+ + V
Sbjct: 586 NKGMRKKGFLALDQEILQDLEKQHDSVAAHNPL-LLPMIIRPFPWMSFDVGCYIQARTKV 644
Query: 461 MRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
MRI Q ++ + L+ ++ AL+ L T W +N+R+L+V+ W L ++
Sbjct: 645 MRIVDKGLQEESCRNH---DLSRIYAALDVLSGTGWCINRRLLNVVQHAWLDDMILGEIP 701
Query: 521 DRKDVPLPE-ELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGF 579
+ D +PE + D D AE K V + N + HS RC + +L VA M D F
Sbjct: 702 QKDDFAVPELDPDCIDAAESYSQYREKKRVEQRNKDLHSLRCSLINQLHVATTMSDFKEF 761
Query: 580 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVD 639
++PHNLDFRGRAYP+ P+LNHLGSD+CRG+L+F + +PLGK G +WLK+HLANL+ G +
Sbjct: 762 FFPHNLDFRGRAYPIPPHLNHLGSDICRGLLKFSKKKPLGKKGFYWLKVHLANLF--GEN 819
Query: 640 KLCYDGRIAFTENHLDDIFDSANKPLE--GKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
K+ YD R+ +TE + I SA PL+ +++WL A+DP+Q LA + + EA+ S P
Sbjct: 820 KISYDDRVKWTEERMSQILHSAKNPLDSASRKFWLSADDPWQALATSMEIQEAIESGDPS 879
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
T +S++PVHQDGSCNGLQHYAALG D++G VNL+ G++P+D Y+ + RVLE + D
Sbjct: 880 TYLSNLPVHQDGSCNGLQHYAALGLDEIGGEQVNLVPGEKPSDPYTTVCNRVLEALDMDL 939
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAI----- 812
+DP + + + ++ + +V RK+VKQTVMT+VYGVT+IGAR+QI RL E I
Sbjct: 940 -RDPSSADHEV-SKLVDKRVSRKVVKQTVMTTVYGVTFIGAREQIYNRLYEAYGIPGTNE 997
Query: 813 --EDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
E+D L+ AS Y AK TL ++ +F AR M WL AK+
Sbjct: 998 LQEND--LYRASMYLAKLTLASVGNIFVGARKTMEWLTSVAKI 1038
>M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna polymerase
protein OS=Eutypa lata UCREL1 GN=UCREL1_3776 PE=4 SV=1
Length = 1344
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 299/516 (57%), Gaps = 31/516 (6%)
Query: 349 DWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP------PDIRPAFKHTLKNIST 402
D + W + KVG+ L+ L+D+A + N + + P I+PA H++ +
Sbjct: 463 DTRSWPIYIRAKVGAVLLGALLDSAKV----NVVREHPETKALISQIQPAMTHSIMH--- 515
Query: 403 DSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMR 462
+ G K V+ LV + + + ++PMLV P WT +DKG +L P++++R
Sbjct: 516 --RRGRKVGVVLANKWLVDLMMREPRGEFLARHLPMLVEPEPWTRFDKGGFLNSPAHLVR 573
Query: 463 IHGAKQQRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLV 520
G ++ + A + + + V + L+ LG T W+VN+ V V+ + W G LA++
Sbjct: 574 TKGGEKDQRIYAEAALERGDMEQVSKGLDVLGRTAWQVNQNVFKVMLEAWNSGEKLANIP 633
Query: 521 D-RKDVPLPEE-LDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDG 578
++P P E ++D R+W +VK + HS+RC I +L +AR KD+
Sbjct: 634 PLHPNIPTPPEPAPSDDMMHRREWLKAVKAAENLKSGLHSERCFINFQLEIARAFKDQ-T 692
Query: 579 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGV 638
FY+PHN+DFRGRAYP+ PYLNH+G+D RG+L F GR LG+SGL WLK+HLAN++ G
Sbjct: 693 FYFPHNMDFRGRAYPIPPYLNHMGADHARGLLRFAVGRELGESGLRWLKVHLANVF--GY 750
Query: 639 DKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPET 698
DK R +F ++L +I DSA+ PL G+RWWL+AEDP+QCLA C L AL SP P
Sbjct: 751 DKASLKERESFAMDNLANIHDSADNPLNGQRWWLKAEDPWQCLATCFELKAALESPEPTK 810
Query: 699 TMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE 758
+SH+PV DG+CNGLQHYAALG D GA VNL+ GD+PADVYS +A V E + D +
Sbjct: 811 YVSHIPVQMDGTCNGLQHYAALGGDLWGAQQVNLVPGDRPADVYSAVANLVKENIAEDVK 870
Query: 759 KDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE---RCAIEDD 815
D N L A+ + ++ RK+VKQTVMT+VYGVT++GA+ Q+ ++L E
Sbjct: 871 AD-----NFL-AKAIDGKITRKVVKQTVMTNVYGVTFVGAKAQVLKQLDAAYPNLQEETG 924
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
+ Y A AL MF A I WLG+CA
Sbjct: 925 VPTSLVASYVATKIFKALSTMFRGAHDIQYWLGECA 960
>A3LX46_PICST (tr|A3LX46) DNA-directed RNA polymerase OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RPO41 PE=3 SV=2
Length = 1251
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/725 (33%), Positives = 372/725 (51%), Gaps = 88/725 (12%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK- 217
RQ ++E + A +++ E+M+K+ P + + W++ L + E E+C+
Sbjct: 321 RQRRLEVRGADGAKEKWKHEFEEMQKRGALPLNKGLNAQLFQWYKNLLPYVKKEAEMCQK 380
Query: 218 --DTRLRLT---------------HGPYFNELPADMMAVITMHKLMGLLMTNTNG--VGS 258
D ++ T + PY +P + M VIT+ +L+ L N+ G V
Sbjct: 381 LMDGKVSKTDLSPDEKKLYKDREYYAPYMVLVPPEKMCVITILELLKL---NSTGGIVDG 437
Query: 259 AKVVQGASQIGEAIEHEARIYRFMEKT----KKKTKATDNCEGESDLAPVKKGXXXXXXX 314
+ + +G+A+E E + ++ KK K+T+ +
Sbjct: 438 MRAARALISVGKAVELEYKSQSLLKSEIKAFSKKVKSTNQWK------------------ 479
Query: 315 XXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAY 374
+KN I+ DD W K+G+ L LL+ A
Sbjct: 480 ---------------RILSNKKN----NIIENPDDSTDWSYTVYAKLGAVLTNLLLFVAK 520
Query: 375 IQPPANQ--IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHM 431
+ A+ G +PAF HT + + NG K GVI+ +++Q +S +
Sbjct: 521 VPVKAHNPTTGKTITGSQPAFFHTYQFL-----NGQK-LGVIKLHKEIIKQLAGRSLSNA 574
Query: 432 VIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAP-VTQLNPVFEALN 489
V P +PMLV P W Y+ G YL+ S ++RI + + +++A + LN V++ LN
Sbjct: 575 VQPQLLPMLVAPREWHSYNDGGYLYSRSTLVRIKDSAETTAYLRKAADLGNLNEVYDGLN 634
Query: 490 TLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVP-LPEELDTEDE-AEIRKWKWSVK 547
LG T W VN+RV +I + W G D+ + P LPE L + E A+ +++ ++
Sbjct: 635 VLGKTPWTVNRRVFEIITRYWNSGEEFLDIPPIMEEPNLPEPLPVDAEPAQKFEYQRKLR 694
Query: 548 NVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 607
+ E SQRCD KL +AR E F+ PHN+DFRGRAYP+ P+ NHLG+DL R
Sbjct: 695 SALNEAASLRSQRCDTNYKLEIARGFLGEKVFF-PHNVDFRGRAYPISPHFNHLGNDLTR 753
Query: 608 GILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEG 667
+ F EGR LG+ GL WLKIHLAN+Y GVDK + R+ F ++L+++F+SA P +
Sbjct: 754 SLFLFWEGRELGERGLEWLKIHLANVY--GVDKAPLNERVQFVNDNLENVFESARNPYDT 811
Query: 668 KRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGA 727
WW +AE P+Q L C L EA + P +SH+P+HQDG+CNGLQHYAALG D GA
Sbjct: 812 DAWWKKAEKPWQALGVCFELEEAYKLENPTQYVSHIPIHQDGTCNGLQHYAALGGDIEGA 871
Query: 728 AAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVM 787
VNL+ D+P DVY +A+ V + + +AE+ K +A L +++ RK+VKQTVM
Sbjct: 872 RQVNLLPADRPQDVYKYVASLVQKRIDAEAEEGNK------YAVFLQDKITRKVVKQTVM 925
Query: 788 TSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWL 847
T+VYGVT++GA QIK+++ + + E+D + Y +++E+FE A I WL
Sbjct: 926 TNVYGVTFVGATAQIKKQIDQYFSGEEDVADYAR--YLTMHVFNSIRELFEGAHLIQDWL 983
Query: 848 GDCAK 852
GD AK
Sbjct: 984 GDAAK 988
>H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_6851 PE=3 SV=1
Length = 1357
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 236/646 (36%), Positives = 340/646 (52%), Gaps = 72/646 (11%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGV-GSAKVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E R +
Sbjct: 499 RLDYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEMEFRSEQ 556
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
++ + + + E KK Q A
Sbjct: 557 VLKSESQTFRDVNKKSPE-----FKKLV-----------------------------QNA 582
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTA--YIQ---PPANQIGDGPPDIRPA 392
+ R + W Q + K+GS L+ +LI A ++Q P G PA
Sbjct: 583 KSVFRSSQIEQSKILWPQNIRAKIGSVLISMLIHVAKVFVQGVDPITKAKVHGEA---PA 639
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L+ Q + V P +PMLV P W +
Sbjct: 640 FAHGYQ-----YHNGSK-LGVLKIHKTLIHQLNGERLIASVQPQLLPMLVEPKPWVNWRS 693
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG T W VN++V V+ Q+
Sbjct: 694 GGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGDTPWTVNRKVFDVVSQV 753
Query: 510 WAKGGGLADLVDRKD---VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
W +G D+ ++ +PL ++ D + +R WK VK + + + S RCD K
Sbjct: 754 WNRGESFLDIPSAQEEMVLPLAPPRNS-DPSILRAWKLQVKTIANKFSSDRSNRCDTNYK 812
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L +AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WL
Sbjct: 813 LEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWL 871
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHL+NL+ G DKL + R+AFTE+HL+D+ DSA PL G+RWW A+ P+Q LA C
Sbjct: 872 KIHLSNLF--GFDKLRLEDRVAFTESHLNDVKDSAENPLSGERWWTTADKPWQALATCFE 929
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L E ++ PE +SH PVHQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 930 LNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPNDKPQDVYAHVA 989
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 990 RLVQKRLEIAAEKGDE------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQL 1043
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K A++E+F +A I WLG+ AK
Sbjct: 1044 SP--IFDDRKESLDYSKYLTKHVFGAIRELFHSAHLIQDWLGESAK 1087
>G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_003940 PE=3 SV=1
Length = 1317
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/666 (34%), Positives = 346/666 (51%), Gaps = 81/666 (12%)
Query: 205 LRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNG--VGSAKVV 262
L+N E++ KD RL + PY +P M VIT+ +L+ L N+ G + +
Sbjct: 448 LKNCKPEEKQALKD---RLYYAPYLILVPPKKMCVITILELLKL---NSTGGIIDGMRTA 501
Query: 263 QGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXX 322
+ +G A+E E + R M+ EG S +K
Sbjct: 502 RAVISVGRALELEYKSQRLMQ-----------AEGRSLSKKLKT---------------- 534
Query: 323 XXXXXXXXXXXXQKNQQALGIVRGRDDWKP--------WGQEAQVKVGSCLMQLLIDTAY 374
Q +R R D+ W KVGS L LLI A
Sbjct: 535 --------------TNQWKRFLRQRKDYNKEDPIANNEWDYPIYAKVGSVLASLLIHVAK 580
Query: 375 IQPPANQ--IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHM 431
+ G ++PAF HT + ++ GV++ SLV+Q +
Sbjct: 581 VPVKGTDPTTGKTVRGMQPAFHHTYQFFQ------GQKLGVLKVHKSLVRQLAGNELGNS 634
Query: 432 VIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAP-VTQLNPVFEALN 489
V P +PMLVPP W Y+ G YLF + ++RI + + ++ A + L+P+++ LN
Sbjct: 635 VQPQLLPMLVPPRPWRSYNDGGYLFSQNNIVRIKDSAETTAYLRAASDMNNLDPIYDGLN 694
Query: 490 TLGSTKWRVNKRVLSVIDQIWAKGGGLADL---VDRKDVPLPEELDTEDEAEIRKWKWSV 546
LG+T W VN++V VI ++W G D+ ++ D+P P L+ E +E ++ V
Sbjct: 695 VLGNTAWTVNRKVFDVISKVWNTGEEYLDIPPIIEEPDLPSPLPLNAE-PSEKADYQRRV 753
Query: 547 KNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 606
+ + SQRCD KL +AR E ++PHN+DFRGRAYP+ P+ NHLG+D+
Sbjct: 754 RKAVNDAASARSQRCDTNYKLEIARGFIGEK-LFFPHNVDFRGRAYPISPHFNHLGNDMT 812
Query: 607 RGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLE 666
R + F +G+ LG+ GL WLKIHLAN+Y GVDK D R+ F E++LD+IFDSA PL+
Sbjct: 813 RSLFLFWDGKKLGEQGLRWLKIHLANVY--GVDKAPLDERVKFVEDNLDNIFDSAKNPLD 870
Query: 667 GKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLG 726
G++WW + + P+Q L+ C L+EA + P +SH+PVHQDG+CNGLQHYAALG D G
Sbjct: 871 GRKWWEKGDKPWQVLSVCFELSEAYKLDDPTEYVSHIPVHQDGTCNGLQHYAALGGDIEG 930
Query: 727 AAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTV 786
A VNLI ++P DVY +A V + + +AEK K +A L +++ RK+VKQTV
Sbjct: 931 ARQVNLIPAERPQDVYKFVAGLVQKRVDAEAEKGNK------YAIFLRDKITRKVVKQTV 984
Query: 787 MTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGW 846
MT+VYGVT++GA QI++++ +D ++ S Y +++E+F A I W
Sbjct: 985 MTNVYGVTFVGAVLQIQKQIDHHFGKDDSDKVEEYSRYLTNHVFDSMRELFLGAHLIQDW 1044
Query: 847 LGDCAK 852
LG+ A+
Sbjct: 1045 LGESAR 1050
>R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna polymerase
protein OS=Neofusicoccum parvum UCRNP2 GN=UCRNP2_6354
PE=4 SV=1
Length = 1046
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 288/508 (56%), Gaps = 25/508 (4%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI---RPAFKHTLKNISTDSQNGSK 409
W + KVG+ + +++ A I P + + + PAF H S ++G
Sbjct: 166 WAPMIKAKVGALCLSKILEAAKI-PVTREERETRKQLTANEPAFYHA-TVYSAGRKSGMI 223
Query: 410 RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQ 469
R I D L ++ L R PM+V P WTGY +G YL P V++
Sbjct: 224 RLHQIVLDKLRREPL----RGSFGTKYPMVVEPLPWTGYKEGGYLRYPEPVIKEKSNDDS 279
Query: 470 RDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG---GGLADLVDRKD 524
+ A + + ++ V L+ LG T W++N+ V V+ + W G G LA + +
Sbjct: 280 QKIYAMAAIEKGDMDQVLAGLSVLGKTAWKINRDVFKVVIEAWNTGEPIGKLAPENPKME 339
Query: 525 VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
P PE + E W K + HSQRC +L VAR +DE FY+PHN
Sbjct: 340 YP-PEPSPEAPKKEYALWLKEKKRIDNAKGGYHSQRCFQNFQLEVARAFRDE-AFYFPHN 397
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
+DFRGRAYP+ P LNHLG+DL RG+L F +G+PLG GL WLKIHLAN++ G DK
Sbjct: 398 MDFRGRAYPIPPLLNHLGADLSRGLLTFAKGKPLGSVGLTWLKIHLANVF--GYDKASLT 455
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R AF H++DI+DS PL G++WWL+AEDP+QCLA C L A SP P + +SH+P
Sbjct: 456 DREAFAMEHINDIYDSCQNPLTGRKWWLKAEDPWQCLATCFELKNAFDSPDPSSYISHLP 515
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
VHQDG+CNGLQHYAALG DK GAA VNL GD+P+D+YS +A +I++++ D K
Sbjct: 516 VHQDGTCNGLQHYAALGGDKAGAAQVNLEPGDRPSDIYSAVA----DIVKKEVASDAKA- 570
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDD-AQLFGASC 823
A+ L ++ RK+VKQTVMT+VYGVT+IGAR Q+ ++L+ + E+ A L G
Sbjct: 571 -GGAFAKILDGRITRKVVKQTVMTNVYGVTFIGARAQVIKQLEAVLSEEEQKAGLLGMGA 629
Query: 824 YAAKTTLTALQEMFEAARSIMGWLGDCA 851
Y AK AL +MF A+ I WLG CA
Sbjct: 630 YVAKLIFKALGQMFNGAQEIQDWLGVCA 657
>C5JUP7_AJEDS (tr|C5JUP7) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain SLH14081) GN=BDBG_06489 PE=3 SV=1
Length = 1382
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 374/719 (52%), Gaps = 74/719 (10%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAI----VAE 212
RQ ++E++ + A +++ E ++K + P +P M +L W L + I
Sbjct: 366 RQRRLESDCVDSAIARWRKESEMLQKVGVNP-IPSKPMGALLYDWHTQLMSRINEELELI 424
Query: 213 QELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGS-AKVVQGA 265
+E K +R+ R+ PY + D +A +T+ L N +GV K+
Sbjct: 425 EESEKKSRMLPADSQRVEISPYLRAIKTDKLAALTILSTFNAL--NKSGVDKGVKLTALV 482
Query: 266 SQIGEAI--EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
+G+AI E+ A R +EK K + T + V KG
Sbjct: 483 MYLGKAIYDEYLAMQLRELEKKSKSPRRTSALIDKL----VHKGTKKA------------ 526
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYI-----Q 376
Q Q + I R + +P W Q K+G+CL +L+ TA +
Sbjct: 527 -----------QVQWQRI-IARFEESQRPVDWSPVVQAKIGACLASMLLSTATVPVSTKD 574
Query: 377 PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYM 436
P N+ + AF+ + + G + V D +V++ + ++ ++
Sbjct: 575 PSTNRTQRTD---QAAFRRVYQ-----LERGFRVGYVHANDHIVEKLRREPLGELLAKHL 626
Query: 437 PMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQQRDAVKRAPVT-QLNPVFEALNTLGST 494
PM+ PP WT +G +L PS VMR+ G Q V+ A L+ VF L LG T
Sbjct: 627 PMVCPPRPWTSAREGGFLEYPSAVMRVKAGDISQLSYVETAAARGDLDTVFAGLTVLGKT 686
Query: 495 KWRVNKRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKEN 553
W++N+ VL V+ + W G +A+L + ++ PE+ +T+D ++ + + +
Sbjct: 687 GWKINRGVLEVMLEAWNSGEEIANLAPENPNIIEPEKPETDDRDILKDYYRAKIHAANTR 746
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
HSQRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F
Sbjct: 747 TGYHSQRCFQNFQLEIARAYRNET-FYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFS 805
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
+GR LG SGL WLKIHLAN++ G DK + R F +HL+DI DSA L+GK+WWL+
Sbjct: 806 KGRELGTSGLRWLKIHLANVF--GYDKASFQEREQFAMDHLEDIRDSAINGLKGKKWWLD 863
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
A DPFQCLAACI L A+ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL
Sbjct: 864 AGDPFQCLAACIELTNAMALEDPTKFVSHLPVHQDGSCNGLQHYAALGGDIIGAQQVNLE 923
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
D+P+D+Y+G+A V + +++DA +T A+ L +++ RK+VKQTVMT+VYGV
Sbjct: 924 PSDRPSDIYTGVAEHVKQSIQKDAANGDQT------AKLLEDKITRKIVKQTVMTNVYGV 977
Query: 794 TYIGARDQIKRRLKERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
T++GA Q++++L + + + G + Y A+ AL MF A I WLGDCA
Sbjct: 978 TFLGAIRQVRKQLVDHYPDLFHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 1036
>C5GMV9_AJEDR (tr|C5GMV9) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ER-3 / ATCC MYA-2586) GN=BDCG_06127 PE=3 SV=1
Length = 1382
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 374/719 (52%), Gaps = 74/719 (10%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAI----VAE 212
RQ ++E++ + A +++ E ++K + P +P M +L W L + I
Sbjct: 366 RQRRLESDCVDSAIARWRKESEMLQKVGVNP-IPSKPMGALLYDWHTQLMSRINEELELI 424
Query: 213 QELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGS-AKVVQGA 265
+E K +R+ R+ PY + D +A +T+ L N +GV K+
Sbjct: 425 EESEKKSRMLPADSQRVEISPYLRAIKTDKLAALTILSTFNAL--NKSGVDKGVKLTALV 482
Query: 266 SQIGEAI--EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
+G+AI E+ A R +EK K + T + V KG
Sbjct: 483 MYLGKAIYDEYLAMQLRELEKKSKSPRRTSALIDKL----VHKGTKKA------------ 526
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYI-----Q 376
Q Q + I R + +P W Q K+G+CL +L+ TA +
Sbjct: 527 -----------QVQWQRI-IARFEESQRPVDWSPVVQAKIGACLASMLLSTATVPVSTKD 574
Query: 377 PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYM 436
P N+ + AF+ + + G + V D +V++ + ++ ++
Sbjct: 575 PSTNRTQRTD---QAAFRRVYQ-----LERGFRVGYVHANDHIVEKLRREPLGELLAKHL 626
Query: 437 PMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQQRDAVKRAPVT-QLNPVFEALNTLGST 494
PM+ PP WT +G +L PS VMR+ G Q V+ A L+ VF L LG T
Sbjct: 627 PMVCPPRPWTSAREGGFLEYPSAVMRVKAGDISQLSYVETAAARGDLDTVFAGLTVLGKT 686
Query: 495 KWRVNKRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKEN 553
W++N+ VL V+ + W G +A+L + ++ PE+ +T+D ++ + + +
Sbjct: 687 GWKINRGVLEVMLEAWNSGEEIANLAPENPNIIEPEKPETDDRDILKDYYRAKIHAANTR 746
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
HSQRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F
Sbjct: 747 TGYHSQRCFQNFQLEIARAYRNET-FYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFS 805
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
+GR LG SGL WLKIHLAN++ G DK + R F +HL+DI DSA L+GK+WWL+
Sbjct: 806 KGRELGTSGLRWLKIHLANVF--GYDKASFQEREQFAMDHLEDIRDSAINGLKGKKWWLD 863
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
A DPFQCLAACI L A+ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL
Sbjct: 864 AGDPFQCLAACIELTNAMALEDPTKFVSHLPVHQDGSCNGLQHYAALGGDIIGAQQVNLE 923
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
D+P+D+Y+G+A V + +++DA +T A+ L +++ RK+VKQTVMT+VYGV
Sbjct: 924 PSDRPSDIYTGVAEHVKQSIQKDAANGDQT------AKLLEDKITRKIVKQTVMTNVYGV 977
Query: 794 TYIGARDQIKRRLKERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
T++GA Q++++L + + + G + Y A+ AL MF A I WLGDCA
Sbjct: 978 TFLGAIRQVRKQLVDHYPDLFHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 1036
>K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_69188 PE=3 SV=1
Length = 967
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 309/523 (59%), Gaps = 31/523 (5%)
Query: 344 VRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPAN-QIGDGPPDIRPAFKHTLKNIST 402
+ G + W Q + K+G L+ L++ A ++ A + G+ +++PAF H + +
Sbjct: 180 IEGEERSLGWSQVTRSKIGGILVDCLMEVAEVERTAKLENGEKVSEMQPAFHHAYEYL-- 237
Query: 403 DSQNGSKRYGVIECDSLVQQGLEKSA-RHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYV 460
GS R GVI + +V + L + + P ++PMLV P W ++ G YL+ + V
Sbjct: 238 ---RGS-RLGVIRLNPVVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYLYSKTSV 293
Query: 461 MRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL 519
MR + +Q+ +K A Q+ V+ L+ L ST W++NK+V V+ + W G L +
Sbjct: 294 MRFKDSIEQQIYLKEASKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSGERLGKV 353
Query: 520 VDRK-DVPLPEELDTEDEAEIRKWKW-----SVKNVRKENNERHSQRCDIELKLAVARKM 573
D P P + E+ A+++K + N K NN HS RC + KL +AR
Sbjct: 354 PPAMYDGPEPVQPQVEELADMKKRSYYLVRQKAYNQAKANN--HSDRCSVNYKLEIARAF 411
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
+ D FY+PHNLDFRGRAYP+ +LNH+G DLCRG+L F E +PLG GL WLKIH+ANL
Sbjct: 412 LN-DEFYFPHNLDFRGRAYPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIHIANL 470
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEG---KRWWLEAEDPFQCLAACINLAEA 690
Y G DK +D R+ + + HLD I+ +A + L+ K WWLEA DP+Q LAA I L +A
Sbjct: 471 Y--GYDKANFDDRVNWVDEHLDQIYQTATRLLDDPATKAWWLEASDPWQFLAASIELHDA 528
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
L S PE S +PVHQDG+CNGLQHYAALG D GA VNL D+P+DVYS + V
Sbjct: 529 LESGNPEAFESSLPVHQDGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVGAMVE 588
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
E + +D E K +A L ++ RK+VKQTVMT+VYGVT+IGAR+QI+++LK+R
Sbjct: 589 EAIAKDCESGDK------YALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRK 642
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I ++ + + A+ Y A+ L + +F+ A+SI WL A++
Sbjct: 643 DIPEE-ECWSAAAYLARLVLGCIGNLFKGAQSIQTWLNLSARL 684
>F2TG61_AJEDA (tr|F2TG61) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ATCC 18188 / CBS 674.68) GN=BDDG_05167 PE=3 SV=1
Length = 1393
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 374/719 (52%), Gaps = 74/719 (10%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAI----VAE 212
RQ ++E++ + A +++ E ++K + P +P M +L W L + I
Sbjct: 366 RQRRLESDCVDSAIARWRKESEMLQKVGVNP-IPSKPMGALLYDWHTQLMSRINEELELI 424
Query: 213 QELCKDTRL------RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGS-AKVVQGA 265
+E K +R+ R+ PY + D +A +T+ L N +GV K+
Sbjct: 425 EESEKKSRMLPADSQRVEISPYLRAIKTDKLAALTILSTFNAL--NKSGVDKGVKLTALV 482
Query: 266 SQIGEAI--EHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
+G+AI E+ A R +EK K + T + V KG
Sbjct: 483 MYLGKAIYDEYLAMQLRELEKKSKSPRRTSALIDKL----VHKGTKKA------------ 526
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKP--WGQEAQVKVGSCLMQLLIDTAYI-----Q 376
Q Q + I R + +P W Q K+G+CL +L+ TA +
Sbjct: 527 -----------QVQWQRI-IARFEESQRPVDWSPVVQAKIGACLASMLLSTATVPVSTKD 574
Query: 377 PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYM 436
P N+ + AF+ + + G + V D +V++ + ++ ++
Sbjct: 575 PSTNRTQRTD---QAAFRRVYQ-----LERGFRVGYVHANDHIVEKLRREPLGELLAKHL 626
Query: 437 PMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQQRDAVKRAPVT-QLNPVFEALNTLGST 494
PM+ PP WT +G +L PS VMR+ G Q V+ A L+ VF L LG T
Sbjct: 627 PMVCPPRPWTSAREGGFLEYPSAVMRVKAGDISQLSYVETAAARGDLDTVFAGLTVLGKT 686
Query: 495 KWRVNKRVLSVIDQIWAKGGGLADLV-DRKDVPLPEELDTEDEAEIRKWKWSVKNVRKEN 553
W++N+ VL V+ + W G +A+L + ++ PE+ +T+D ++ + + +
Sbjct: 687 GWKINRGVLEVMLEAWNSGEEIANLAPENPNIIEPEKPETDDRDILKDYYRAKIHAANTR 746
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
HSQRC +L +AR ++E FY PHNLDFRGRAYPM PY N +G+D CRG+L F
Sbjct: 747 TGYHSQRCFQNFQLEIARAYRNE-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFS 805
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
+GR LG SGL WLKIHLAN++ G DK + R F +HL+DI DSA L+GK+WWL+
Sbjct: 806 KGRELGTSGLRWLKIHLANVF--GYDKASFQEREQFAMDHLEDIRDSAINGLKGKKWWLD 863
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
A DPFQCLAACI L A+ P +SH+PVHQDGSCNGLQHYAALG D +GA VNL
Sbjct: 864 AGDPFQCLAACIELTNAMALEDPTKFVSHLPVHQDGSCNGLQHYAALGGDIIGAQQVNLE 923
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
D+P+D+Y+G+A V + +++DA +T A+ L +++ RK+VKQTVMT+VYGV
Sbjct: 924 PSDRPSDIYTGVAEHVKQSIQKDAANGDQT------AKLLEDKITRKIVKQTVMTNVYGV 977
Query: 794 TYIGARDQIKRRLKERCAIEDDAQLFG-ASCYAAKTTLTALQEMFEAARSIMGWLGDCA 851
T++GA Q++++L + + + G + Y A+ AL MF A I WLGDCA
Sbjct: 978 TFLGAIRQVRKQLVDHYPDLFHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCA 1036
>E9EDA9_METAQ (tr|E9EDA9) DNA-directed RNA polymerase OS=Metarhizium acridum
(strain CQMa 102) GN=MAC_07857 PE=3 SV=1
Length = 1414
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 301/516 (58%), Gaps = 39/516 (7%)
Query: 351 KPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPP--DIRPAFKHTLKNISTDSQNGS 408
+PW + +VGS L++ LID A+++ P +PAF H
Sbjct: 562 EPWSISIRAQVGSFLLKTLIDNAFVKVTMEHPTTKEPISQKQPAFTHM------QQPRRG 615
Query: 409 KRYGVIECDS-LVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAK 467
K+ GV+ +S LVQQ ++ + ++PM+V P W ++G +L + +R+
Sbjct: 616 KKVGVLHFNSNLVQQLKKEPVGDYIAKHLPMIVEPKPWRQLNEGGFLDSRTTFVRVKSGD 675
Query: 468 QQRD-----AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD- 521
++ A+K +TQ VF+ L+ LG T WR+NK VL+V+ + W G +A++
Sbjct: 676 VEQKLYTEAAIKTGDMTQ---VFKGLDVLGKTAWRINKNVLNVMMEAWNSGEEIANMPPL 732
Query: 522 RKDVPLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFY 580
+ +PEE D+ + +R+ W +VK + E + HSQRC + L+L +AR +++ Y
Sbjct: 733 NPEFDIPEEPDSSADPLLRRSWMQAVKAIENERSGMHSQRCFMNLQLEIARAFRNQT-MY 791
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
+PHN+D+RGRAYPM YLNH+G+D R IL+F G+ LG+ GL WLKIHLANLY G+DK
Sbjct: 792 FPHNIDYRGRAYPMPTYLNHMGADHARAILKFARGKELGERGLRWLKIHLANLY--GLDK 849
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
+D R AFT +++ +I DSA PL G RWWL+AED +QCLAAC L AL P P +
Sbjct: 850 SNFDEREAFTNDNISNIIDSATNPLNGSRWWLKAEDAWQCLAACFELKAALELPDPTKFV 909
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
S +PVHQDG+CNGLQHYAALG D GA VNL G++PADVYS +A V + + +DAE
Sbjct: 910 SQLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGERPADVYSAVADLVKQAIDKDAE-- 967
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR-------LKERCAIE 813
N AL L ++ RK+VKQTVMT+VYGVT+ GA+ Q+ ++ L + C I
Sbjct: 968 -AKNEFAL---VLQGKITRKVVKQTVMTNVYGVTFAGAKKQVCKQIDALYPDLGKECGIP 1023
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGD 849
+ S Y A+ AL MF A I WLG+
Sbjct: 1024 N----LVLSTYIARHIFNALATMFRGAHDIQYWLGE 1055
>K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_200200 PE=3 SV=1
Length = 967
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 310/523 (59%), Gaps = 31/523 (5%)
Query: 344 VRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPAN-QIGDGPPDIRPAFKHTLKNIST 402
+ G + W Q + K+G L+ L++ A ++ A + G+ +++PAF H + +
Sbjct: 180 IEGEERSLGWSQVTRSKIGGILVDCLMEVAEVERTAKLENGEKVSEMQPAFHHAYEYL-- 237
Query: 403 DSQNGSKRYGVIECDSLVQQGLEKSA-RHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYV 460
GS R GVI + +V + L + + P ++PMLV P W ++ G YL+ + V
Sbjct: 238 ---RGS-RLGVIRLNPVVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYLYSKTSV 293
Query: 461 MRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL 519
MR + +Q+ +K A Q+ V+ L+ L ST W++NK+V V+ + W G L +
Sbjct: 294 MRFKDSIEQQIYLKEASKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSGERLGKV 353
Query: 520 VDRK-DVPLPEELDTEDEAEIRKWKWSV-----KNVRKENNERHSQRCDIELKLAVARKM 573
D P P + E+ A+++K + + N K NN HS RC + KL +AR
Sbjct: 354 PPAMYDGPEPVQPQVEELADMKKRSYYLVRQKAYNQAKANN--HSDRCSVNYKLEIARAF 411
Query: 574 KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANL 633
+ D FY+PHNLDFRGRAYP+ +LNH+G DLCRG+L F E +PLG GL WLKIH+ANL
Sbjct: 412 LN-DEFYFPHNLDFRGRAYPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIHIANL 470
Query: 634 YAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEG---KRWWLEAEDPFQCLAACINLAEA 690
Y G DK +D R+ + + HLD I+ +A + L+ K WWLEA DP+Q LAA I L +A
Sbjct: 471 Y--GYDKANFDDRVNWVDEHLDQIYQTATRLLDDPATKAWWLEASDPWQFLAASIELHDA 528
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
L S PE S +PVHQDG+CNGLQHYAALG D GA VNL D+P+DVYS + V
Sbjct: 529 LESGNPEAFESSLPVHQDGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVGAMVE 588
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
E + +D E K +A L ++ RK+VKQTVMT+VYGVT+IGAR+QI+++LK+R
Sbjct: 589 EAIAKDCESGDK------YALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRK 642
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
I ++ + + A+ Y A+ L + +F+ A+SI WL A++
Sbjct: 643 DIPEE-ECWSAAAYLARLVLGCIGNLFKGAQSIQTWLNLSARL 684
>C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_07902 PE=3 SV=1
Length = 1375
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 298/507 (58%), Gaps = 25/507 (4%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR----PAFKHTLKNISTDSQNGS 408
W ++K+G+ L +L TA I P + ++R PAF+H + Q G
Sbjct: 547 WPTSTEIKIGALLSSMLFSTAEI--PTSHKDPVTEEVRYVNEPAFQHVYQ-----LQKGH 599
Query: 409 KRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQ 468
V + +V++ ++ + +++ ++PM+ PP W +G +L P V+R
Sbjct: 600 NVGYVQLHEKVVERLRKEPSGNLLAKHLPMVSPPRPWVSNTQGGFLTQPVQVVRTRHDDA 659
Query: 469 QRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRK-DVP 526
Q ++ A L +++ L LG T W++N+ V V+ + W G +A++V ++
Sbjct: 660 QNQYLQAASERGDLEELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNIT 719
Query: 527 LPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 586
PE+ D +D ++ + + + HSQRC + ++ +AR +E FY PHN+D
Sbjct: 720 EPEKPDADDREAVKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMD 778
Query: 587 FRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGR 646
FRGRAYP+ PY N +G+D CRG+L F EGR LG+SGL WL+IHL+N++ G DK + R
Sbjct: 779 FRGRAYPLPPYFNQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQER 836
Query: 647 IAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVH 706
F+ +H+DDI DSAN L+G+RWWL+A DPFQCLAAC+ L AL P P +SH+PVH
Sbjct: 837 EQFSIDHVDDILDSANNGLKGRRWWLKAADPFQCLAACVELKNALSLPDPTKYVSHLPVH 896
Query: 707 QDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEK-DPKTNP 765
QDGSCNGLQHYAALG D +GA VNL GD+P+D+Y+ +A V + DA+ DP
Sbjct: 897 QDGSCNGLQHYAALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDPI--- 953
Query: 766 NALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA-IEDDAQLFGASCY 824
A+ + ++ RK+VKQTVMT+VYGVT+IGA Q++R+L++ + + ++ + +
Sbjct: 954 ----AKLMDGKITRKVVKQTVMTNVYGVTFIGATRQVRRQLEDHYPELAETDEISKCAVH 1009
Query: 825 AAKTTLTALQEMFEAARSIMGWLGDCA 851
++ +AL MF A I WLGDCA
Sbjct: 1010 VSRAIFSALNSMFSGAHDIQFWLGDCA 1036
>M1W4C2_CLAPU (tr|M1W4C2) DNA-directed RNA polymerase OS=Claviceps purpurea 20.1
GN=CPUR_00077 PE=3 SV=1
Length = 1300
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 310/509 (60%), Gaps = 26/509 (5%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQPPANQ--IGDGPPDIRPAFKHTLKNISTDSQNGSKR 410
W + VGS L+++L++TA ++ A + ++PAF H S + G K+
Sbjct: 437 WSMTIKAHVGSILLKILLETAKVKATARHPTTKELVSQLQPAFTH-----SQQCRKG-KK 490
Query: 411 YGVIECDSLVQQGLEKSA-RHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQ 468
GV+ ++++ + ++K + ++PMLV P WT ++G +L + ++R+ GA++
Sbjct: 491 VGVLYVNAVLVEKMQKEPIGDFIAKHLPMLVEPKPWTKPNEGGFLLSKTALVRVKAGARE 550
Query: 469 QRDAVKRA-PVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL--VDRKDV 525
QR K A L VF+ L+ LG T W++N+ VL+V+ + W G +A++ +D + +
Sbjct: 551 QRLYTKAALKHGCLEQVFKGLDVLGRTSWQINRNVLNVMMESWNSGQEIANMPPLDPQ-L 609
Query: 526 PLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHN 584
LP+E D+ + +R+ W SVK + E + HSQRC + L+L VAR +++ Y+PHN
Sbjct: 610 ELPKEPDSSADPIVRRNWVRSVKEIENERSGLHSQRCFMNLQLEVARMFRNQT-IYFPHN 668
Query: 585 LDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYD 644
+D+RGRAYPM YLNH+G+D RGIL+F G+ LG+ GL WLKIHLANLY G+ K +D
Sbjct: 669 VDYRGRAYPMPTYLNHMGADHTRGILKFARGKELGERGLRWLKIHLANLY--GLGKSSFD 726
Query: 645 GRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMP 704
R AF +++ I +SA PL G RWWLEAEDP+QCLAAC +L A P P +S +P
Sbjct: 727 EREAFANDNMPKIIESATNPLNGSRWWLEAEDPWQCLAACFDLKAASELPDPTKHVSQLP 786
Query: 705 VHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTN 764
+HQDG+CNGLQHYAALG D GA VNL G++PADVYS +A V + + +DA +D K
Sbjct: 787 IHQDGTCNGLQHYAALGGDTWGAKQVNLEPGERPADVYSAVADLVNDAINQDA-RDGKNK 845
Query: 765 PNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR---LKERCAIEDDAQLFGA 821
A+ L +++RK+VKQTVMT+VYGVT+ GA++Q+ ++ L + E
Sbjct: 846 TAAI----LQGKINRKVVKQTVMTNVYGVTFSGAKNQVCKQIDALYPELSKETGINHMVL 901
Query: 822 SCYAAKTTLTALQEMFEAARSIMGWLGDC 850
S Y AK AL MF A I WLG+
Sbjct: 902 STYIAKHIFKALASMFRGAHDIQYWLGEV 930
>N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletotrichum
orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 /
LARS 414 / MAFF 240422) GN=Cob_00315 PE=4 SV=1
Length = 1358
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 253/723 (34%), Positives = 362/723 (50%), Gaps = 73/723 (10%)
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLR--------- 206
L++ I E W RE E L++M ++ N S W + L
Sbjct: 316 LERDCIDSAIERW----REDNESLQNMGMSRII-NHGSFSSRLHDWHQELEARLKDEMAK 370
Query: 207 -NAIVAEQELCKDTRLRLTHGPYFN-ELPADMMAVITMHKLMGLLMTNTN-GVGSAKVVQ 263
+A A + +D R +GP+ P+ + A+ +H L + + G+ A V
Sbjct: 371 IDAAEAVTKKTQDDYDRCLYGPFLRLSTPSRLAALTIIHTLSAVTSVGADRGISLATAVT 430
Query: 264 GASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXX 323
G ++ E + A I ++T K TK + + S P
Sbjct: 431 GLAKTAED-DARAFIMANEKRTDKNTKPSRRVKLSSAEGP---------------QFTLE 474
Query: 324 XXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIG 383
K +A W P + KVG+ L+ I++A I ++I
Sbjct: 475 STESRKVVKPLVKEDKAKESTMANVSWPP---AVRGKVGAALLAAFIESAKI----SKIR 527
Query: 384 DGP------PDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMP 437
+ P +PAF HT T + G + ++ LV + + ++P
Sbjct: 528 EDPVTKTLFSQSQPAFAHT-----TQLKRGKQVGMILLNKELVSVLSREPPGDFLAKHLP 582
Query: 438 MLVPPNNWTGYDKGAYLFLPSYVMRI-HGAKQQR----DAVKRAPVTQLNPVFEALNTLG 492
MLVPP W +DKG +L + ++R+ G K QR A+ R + Q V + L+ LG
Sbjct: 583 MLVPPAPWKSFDKGGFLESKTSLVRVKQGDKDQRLYTEAAIARGDMDQ---VLKGLDVLG 639
Query: 493 STKWRVNKRVLSVIDQIWAKGGGLADLVD-RKDVPLPEELD-TEDEAEIRKWKWSVKNVR 550
T WRVN VL+V+ + W G LA++ +PLP+E + ++D +E R W +VK V
Sbjct: 640 KTAWRVNTPVLNVMLEAWNSGERLANMPPLNPQIPLPDEPEPSDDPSERRAWIKAVKAVE 699
Query: 551 KENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 610
E HSQRC + +L +AR +++ FY+PHN+DFRGRAYP+ YLNH+G+D RG+L
Sbjct: 700 NEKGSLHSQRCYMNFQLEIARAFRNQ-TFYFPHNIDFRGRAYPIPTYLNHMGADNVRGLL 758
Query: 611 EFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRW 670
F G+ LG+ GL WLK+HLAN++ G DK + R +F ++L +IFDSAN PL G RW
Sbjct: 759 RFANGKQLGERGLKWLKVHLANVF--GFDKASLEDRASFASDNLVNIFDSANNPLGGNRW 816
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
WL+AEDP+QCLA C L A P P +SH+PVHQDG+CNGLQHYAALG D GA V
Sbjct: 817 WLQAEDPWQCLATCFELKAAFELPDPTKYVSHLPVHQDGTCNGLQHYAALGGDAWGARQV 876
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSV 790
NL G +PADVYS +A V E + +DA+ NA+ A L ++ RK+VKQTVMT+V
Sbjct: 877 NLEPGAKPADVYSAVADIVKEGIAKDAKAG-----NAM-AIALTGKITRKVVKQTVMTNV 930
Query: 791 YGVTYIGARDQIKRRLKE---RCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWL 847
YGVT+ GAR Q+ R+L E + Y A+ AL MF A I WL
Sbjct: 931 YGVTFSGARKQVCRQLDALYPELPKESGQDNIVLASYIARLIFQALGSMFRGAHDIQFWL 990
Query: 848 GDC 850
G+
Sbjct: 991 GEI 993
>E3QMB6_COLGM (tr|E3QMB6) DNA-directed RNA polymerase OS=Colletotrichum graminicola
(strain M1.001 / M2 / FGSC 10212) GN=GLRG_07148 PE=3 SV=1
Length = 1395
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 296/516 (57%), Gaps = 41/516 (7%)
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP------PDIRPAFKHTLKNISTDSQ 405
PW + KVG+ L+ LI+TA I+ + + P +PAF H + +
Sbjct: 539 PWPPAVKAKVGAALLSALIETAKIK----VVKEHPETKTLISQFQPAFSHV-----SQLK 589
Query: 406 NGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRI-H 464
G K ++ LV + + ++PM+V P W +DKG +L + ++RI
Sbjct: 590 RGKKIGMMLLNKELVNLMKREPQGDYLAKHLPMVVEPEPWQAFDKGGFLESRANLVRIKQ 649
Query: 465 GAKQQR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL- 519
G K Q+ A+ R + Q VF+ L+ LG T WRVN VL+V+ + W G LA+L
Sbjct: 650 GGKDQKLYSEAAIARGDMDQ---VFKGLDVLGKTAWRVNTPVLNVMLEAWNTGEALANLP 706
Query: 520 VDRKDVPLPEELDTEDEAEI-RKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDG 578
D+P+P E + D+ R W +VK E HS RC + +L +AR +++
Sbjct: 707 ALNPDIPVPPEPEASDDPMAHRNWVRAVKAADNERGGLHSVRCFMNFQLEIARAFRNQT- 765
Query: 579 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGV 638
FY+PHN+DFRGRAYP+ YLNH+G+D RGIL F G+ LG+ GL WLK+HLAN++ G
Sbjct: 766 FYFPHNIDFRGRAYPLPTYLNHMGADHVRGILRFARGKELGEDGLKWLKVHLANVF--GF 823
Query: 639 DKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPET 698
DK R +F ++L +IFDSANKPL+G RWWL+AEDP+QCLA C L AL SP P
Sbjct: 824 DKASLKDRESFAMDNLVNIFDSANKPLDGNRWWLKAEDPWQCLAVCYELKAALESPEPTK 883
Query: 699 TMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE 758
+SH+P+HQDG+CNGLQHYAALG D GA VNL GD+PADVYS +A V E + +DAE
Sbjct: 884 FVSHLPIHQDGTCNGLQHYAALGGDSWGARQVNLEPGDKPADVYSAVANIVKEHIAKDAE 943
Query: 759 KDPKTNPNALHARNLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDA 816
A +A L+ ++ RK+VKQTVMT+VYGVT+ GA+ Q+ ++L +
Sbjct: 944 --------AGNAFGLVMNGKITRKVVKQTVMTNVYGVTFAGAKKQVCKQLDALYPNLYEE 995
Query: 817 QLFGA---SCYAAKTTLTALQEMFEAARSIMGWLGD 849
F + + Y A AL MF A I WLG+
Sbjct: 996 SGFSSIVLASYVATLVFKALSSMFGGAHDIQHWLGE 1031
>Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family protein
OS=Tetrahymena thermophila (strain SB210)
GN=TTHERM_01119540 PE=4 SV=1
Length = 1410
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/730 (32%), Positives = 386/730 (52%), Gaps = 65/730 (8%)
Query: 156 LKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQEL 215
L +RQ+ +E E+ A ++ ++ ED+ K LA N+ + K + WF L I EQ+
Sbjct: 405 LFERQLILEQESQSQAVNKFLKVYEDLNKFGLAVNIGFAKRYIMNWFPNLCKVIKEEQQQ 464
Query: 216 CKDTRL---RLTHGPYFNELPADMMAVITMHKLMG--LLMTNT---------NGVGSAKV 261
C L R + Y +L A+ +A++++ +LM L ++N N + +
Sbjct: 465 CLLGELKGERKYYATYLTKLSAERIAILSLTELMKQILRISNKFKESAENMENTIVDCSI 524
Query: 262 VQGA--SQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXX 319
V A S IGEA+ ++ ++ + + + + DL + +
Sbjct: 525 VSKAIFSSIGEAVN--------LQYIYEQEEKLNKEKEKKDLESLVEKINSNNTSNSSEE 576
Query: 320 XXXXXXXXXXXXXXXQKNQQALGIVRGRDD------WKPWG--QEAQVKVGSCLMQLLID 371
+ NQ+ + + + + ++ G + Q+K+GS L+ L+ +
Sbjct: 577 EVTQRAKKYLADKTKEANQKIMESLYKKKNSTSKLNYQEIGIPKTIQLKIGSLLIYLMKE 636
Query: 372 TAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHM 431
T I+ N + H L S+N GVI + L + +
Sbjct: 637 TIQIRNEQN-----------FWIHLLVPSYKKSKNNDGYVGVININEDFIISLYEQSEKS 685
Query: 432 VIPYM------PMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVF 485
P+M PM+ P W Y+ G Y P+ +MRIH + Q + + L+ ++
Sbjct: 686 ESPFMHLERCLPMIYKPAPWQDYEIGGYYQRPTNLMRIHESPIQEKVL---SYSDLSKMY 742
Query: 486 EALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL----VDRKDVPLPEELDTEDEAEIRK 541
LNT+ T WR+NK+V V+++IW +GGG ++ D KD +L E + R
Sbjct: 743 NILNTVSQTAWRINKKVFDVMEKIWEEGGGQGEIPRRFYDYKDYVYQYQLK---ECKNRD 799
Query: 542 WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHL 601
+ + +E + HS R D +LK+ VA+ ++ + Y+PHN+DFRGR YP+ P+LNH+
Sbjct: 800 EQQRLMKKIQEQRDMHSMRSDFQLKINVAKAFRNIEKIYFPHNVDFRGRIYPIPPHLNHM 859
Query: 602 GSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSA 661
G+D+ RG+LE+ E + +GK+G +WLK+HL+NL G DKL + R+AF E+ +++ A
Sbjct: 860 GADISRGLLEYSESKKIGKTGWYWLKVHLSNLL--GQDKLSFPERVAFAESQFENVKRWA 917
Query: 662 NKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALG 721
+ PL+ R W++ ED +Q LA ++AEAL+ PE +SH+ VH DGSCNGLQHYAA+G
Sbjct: 918 SDPLKH-REWIQVEDAWQALATIFDVAEALKLENPEDYISHLHVHMDGSCNGLQHYAAIG 976
Query: 722 RDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKL 781
RDK GA VNL+ +P D+YS +A V + + +DA D NA+ A+ L + RK+
Sbjct: 977 RDKDGAMQVNLMNAQKPGDLYSHVARMVEQRVGKDANDDL-AKYNAI-AKKLSGNIKRKV 1034
Query: 782 VKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAAR 841
VKQTVMTSVYGVT++GAR QI ++L+++ + ++ + + AS Y A+TTL ++++F +A
Sbjct: 1035 VKQTVMTSVYGVTFVGARKQIYKQLRDKDFLTEE-EAYEASYYLAQTTLDCIKDLFSSAH 1093
Query: 842 SIMGWLGDCA 851
I WL +CA
Sbjct: 1094 YIKKWLINCA 1103
>Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0K12628g PE=3 SV=1
Length = 1326
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/642 (36%), Positives = 336/642 (52%), Gaps = 70/642 (10%)
Query: 225 HGPYFNELPADMMAVITMHKLMGLLMTNTNGV-GSAKVVQGASQIGEAIEHEARIYRFME 283
+ PYF + + M VIT+ +L+ L +T GV + + + +AIE E R + +
Sbjct: 472 YAPYFTLVNPEKMCVITILELLKL--NSTGGVIDGMRTARAVISVSKAIELEFRSEQLLN 529
Query: 284 KTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGI 343
+ K + E ++ +++ I
Sbjct: 530 SENQTFKDINKKSHE----------------------------FKRYVQSAKRTFRSMEI 561
Query: 344 VRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQ----PPANQ---IGDGPPDIRPAFKHT 396
+ R W Q + K+GS L+ LI A + P + GD P AF HT
Sbjct: 562 EKSR---IIWPQTVRAKIGSTLISFLIHVAKVSVEGTDPVTKEKVYGDAP-----AFAHT 613
Query: 397 LKNISTDSQNGSKRYGVIECDSLVQQGL--EKSARHMVIPYMPMLVPPNNWTGYDKGAYL 454
NGSK G+I+ + L E+ + +PMLV P W G+ G YL
Sbjct: 614 YV-----YHNGSK-LGIIKIHKALINRLNGERLLASVQPQLLPMLVKPRPWKGWKSGGYL 667
Query: 455 FLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKG 513
+ S ++R + +Q ++ + ++ +++ LN LG T W VN++V V+ ++W +G
Sbjct: 668 YTQSILVRSRDSPEQLAYLQAVSDSGAIDKIYDGLNVLGETAWTVNRKVFDVVSKVWNEG 727
Query: 514 GGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVAR 571
++ +D LP + D IR+WK K + + + S RCD+ KL +AR
Sbjct: 728 TNFLEIPGIQDELKLLPPPPRSSDPTVIREWKLKNKELANKYSSDKSVRCDLNYKLEIAR 787
Query: 572 KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLA 631
E FY+PHNLDFRGRAYP+ P+ NHLG+DL R +L F +G+ LG GL+WLK+HL+
Sbjct: 788 AFLGEK-FYFPHNLDFRGRAYPLSPHFNHLGNDLSRSLLIFWKGKRLGPDGLNWLKVHLS 846
Query: 632 NLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEAL 691
NL+ GVDK+ + R+ FTE H++DI DSA PL GK WW A+ P+Q LA C+ L EAL
Sbjct: 847 NLF--GVDKVPLEDRVKFTECHIEDIKDSAENPLNGKGWWKTADKPWQALATCMELNEAL 904
Query: 692 RSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLE 751
+ PE +SH PVHQDG+CNGLQHY+ALG D GA VNL+ ++P DVYS +A V
Sbjct: 905 KLDNPEDYISHQPVHQDGTCNGLQHYSALGGDVEGATQVNLVPSEKPQDVYSFVAKLVEA 964
Query: 752 IMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCA 811
+ + A K + A L +V RK+VKQTVMT+VYGVTY+GA QI ++L A
Sbjct: 965 RLEKAAAKGDE------KALILKGKVSRKVVKQTVMTNVYGVTYVGATFQIAKQL---TA 1015
Query: 812 IEDD-AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
I DD A S Y AK A++E+FE A I WLG+CAK
Sbjct: 1016 IFDDRAYSLELSKYLAKHVFAAVRELFEGAHLIQDWLGECAK 1057
>G8BS54_TETPH (tr|G8BS54) DNA-directed RNA polymerase OS=Tetrapisispora phaffii
(strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 /
UCD 70-5) GN=TPHA0D00310 PE=3 SV=1
Length = 1322
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 238/676 (35%), Positives = 347/676 (51%), Gaps = 74/676 (10%)
Query: 191 LPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLM 250
LPY+K E + N+ + + + RLR+ + PYF + + M VIT+ +L+ L
Sbjct: 438 LPYVKQEIEKCKEVM-NSTEKKSTVSRQNRLRMEYAPYFTLVDPEKMCVITILELLKL-- 494
Query: 251 TNTNG--VGSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGX 308
N+ G + + + +G+AIE E R + ++ K + K
Sbjct: 495 -NSTGGIIEGMRTARAVIAVGKAIEMEFRSEQLLKNESHIFKEIKQSQNLKRFVRSAKSR 553
Query: 309 XXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQL 368
K +Q+ I W Q A+ K+GS ++
Sbjct: 554 FRSI-----------------------KIEQSKII---------WSQPARAKIGSIMISN 581
Query: 369 LIDTAYIQPPANQIGDGPPDIR-------PAFKHTLKNISTDSQNGSKRYGVIEC-DSLV 420
LI+ A I+ +G P + PAF H S NG K GV++ SLV
Sbjct: 582 LINVAKIE-----VGGMDPVTKEKVYGEVPAFSH-----SYQYHNGLK-LGVLKIHKSLV 630
Query: 421 QQGLEKSARHMVIP-YMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKR-APV 478
Q + V P +PMLV P W + G Y + S ++R + +Q +K +
Sbjct: 631 HQLNGERMVAAVQPQLLPMLVAPREWKNWKCGGYYYTQSTLIRSKDSPEQVAYLKAVSDA 690
Query: 479 TQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVP--LPEELDTEDE 536
++ V+ LN LGST W VN+++ +VI ++W G D+ ++ LP D
Sbjct: 691 GAIDRVYHGLNVLGSTPWTVNRKIFNVISEVWNTGKPFLDIPGIQNTLNLLPPPAKDADP 750
Query: 537 AEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHP 596
+ IR+WK K++ + + S RCD KL +AR E Y+PHNLDFRGRAYP+ P
Sbjct: 751 SIIRQWKLKNKDIANKFSSNRSVRCDSNYKLEIARAFLGEK-IYFPHNLDFRGRAYPLSP 809
Query: 597 YLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDD 656
+ NHLG+D+ RG+L F G+ LG SGL WLK+HL+NLY G DK + R+ F E ++++
Sbjct: 810 HFNHLGNDMSRGLLIFWRGKQLGASGLKWLKVHLSNLY--GFDKASLEDRVRFAEENMEN 867
Query: 657 IFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQH 716
I DSA PL GK WW A+ P+Q L+ CI L EA + PE +SH PVHQDG+CNGLQH
Sbjct: 868 IKDSAENPLNGKGWWKSADKPWQALSTCIELNEAFKLENPEDFISHQPVHQDGTCNGLQH 927
Query: 717 YAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAE-KDPKTNPNALHARNLIN 775
YAALG D GA VNL D+P DVY +A V+E ++++A D K A+ L +
Sbjct: 928 YAALGGDCEGAKQVNLKPSDKPMDVYKYVANLVVERLKKEAAGGDEK-------AKVLQD 980
Query: 776 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQE 835
++ RK+VKQTVMT+VYGVTY+GA QI ++L + E+ Q S Y + A++E
Sbjct: 981 KITRKVVKQTVMTNVYGVTYVGATFQIDKQLSD--VFENRNQSLELSKYLTRHVFMAIRE 1038
Query: 836 MFEAARSIMGWLGDCA 851
+F A I WLG+C+
Sbjct: 1039 LFHGAHLIQDWLGECS 1054
>J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharomyces arboricola
(strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_0976 PE=3
SV=1
Length = 1351
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 336/645 (52%), Gaps = 70/645 (10%)
Query: 222 RLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSA-KVVQGASQIGEAIEHEARIYR 280
RL +GPY + M VIT+ +L+ L +T GV + + +G+AIE E R +
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL--NSTGGVIEGMRTARAVISVGKAIEMEFRSEQ 550
Query: 281 FMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQA 340
++ + + + E KK Q A
Sbjct: 551 VLKSESQTFRDVNKKSPE-----FKKLV-----------------------------QNA 576
Query: 341 LGIVRGRDDWKP---WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPA 392
+ R + W Q + ++GS L+ +LI A + P G PA
Sbjct: 577 KSVFRSSQIEQSKILWPQNIRAQIGSVLISMLIHVAKVSVQGVDPITKAKVHGEA---PA 633
Query: 393 FKHTLKNISTDSQNGSKRYGVIEC-DSLVQQGLEKSARHMVIP-YMPMLVPPNNWTGYDK 450
F H + NGSK GV++ +L+ Q + V P +PMLV P +W +
Sbjct: 634 FAHGYQ-----YHNGSK-LGVLKIHKTLIHQLNGERLIASVQPQLLPMLVEPKSWINWRS 687
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVNKRVLSVIDQI 509
G Y + S ++R + +Q +K A ++ V++ LN LG+T W VN++V V+ Q+
Sbjct: 688 GGYHYTQSTLLRTKDSPEQVAYLKAASENGDIDRVYDGLNVLGNTPWTVNRKVFDVVSQV 747
Query: 510 WAKGGGLADLVDRKD--VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKL 567
W K G D+ +D V P D + +R WK VK + + + S RCD KL
Sbjct: 748 WNKREGFLDIPGAQDEMVLPPAPPRNSDPSILRTWKLEVKTIANKFSSDRSNRCDTNYKL 807
Query: 568 AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLK 627
+AR E Y+PHNLDFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL WLK
Sbjct: 808 EIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLK 866
Query: 628 IHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINL 687
IHL+NL+ G DKL + R++FTE+HL+DI DSA PL G+ WW A+ P+Q LA C L
Sbjct: 867 IHLSNLF--GFDKLRLEDRVSFTESHLEDIKDSAENPLTGQGWWKTADKPWQALATCFEL 924
Query: 688 AEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIAT 747
E ++ PE +SH P+HQDG+CNGLQHYAALG D GA VNL+ D+P DVY+ +A
Sbjct: 925 NEVMKMDNPEDFISHQPIHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVAR 984
Query: 748 RVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 807
V + + AEK + +A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L
Sbjct: 985 LVQKRLEIAAEKGDE------NAKILQDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLS 1038
Query: 808 ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
+D + S Y K A++E+F +A I WLG+ AK
Sbjct: 1039 P--IFDDRKESLDFSKYLTKHVFGAIRELFHSAHLIQDWLGESAK 1081
>M2MY29_9PEZI (tr|M2MY29) DNA-directed RNA polymerase OS=Baudoinia compniacensis
UAMH 10762 GN=BAUCODRAFT_38669 PE=3 SV=1
Length = 1478
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 250/725 (34%), Positives = 365/725 (50%), Gaps = 80/725 (11%)
Query: 158 KRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLRNAIVAEQEL 215
+RQ ME + + A + ++E +++RK ++ L + +L W++ L A+ E
Sbjct: 384 ERQRLMEETSVDIAIQRWREADDELRKIGISTQLQSRPLGALMWQWYQALLPALKEELAE 443
Query: 216 CKDTRL---------RLTHGPYFNELPADMMAVITM----HKLMGLLMTNTNGVG-SAKV 261
C+ R + PY LP D +A T+ + G +T K+
Sbjct: 444 CRKVMAQPDGAKEEDRSFYAPYLELLPMDKVAANTILFVVSRFAGGKDRHTKKYEVEMKL 503
Query: 262 VQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXX 321
+ +G+ +E EA R +E+ K++ + + KG
Sbjct: 504 SHLTTSLGKQLEAEADASRSVEQMKERRQGGKIKASKRRQGMFAKGLK------------ 551
Query: 322 XXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYI-----Q 376
K +V D W +A+VK+ + L+Q L ++A +
Sbjct: 552 -------------HKKGANSTLVESDDKWP---LDAKVKLCAMLIQKLKESAQLPVTREH 595
Query: 377 PPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIP-Y 435
P Q ++PAF H +K + K+ G++ + + LE VI
Sbjct: 596 PRTKQ---KITQLQPAFLHRIKYVL------GKKVGIVAPNPALIDKLESEPMGSVIAKR 646
Query: 436 MPMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQQRD----AVKRAPVTQLNPVFEALNT 490
MPM+V P WTG+ G Y+ + V+R+ G K RD A + +TQL + L
Sbjct: 647 MPMIVEPKPWTGWSVGGYIHYANDVLRLGPGDKSGRDYFHAAHNKGDMTQL---YAGLTA 703
Query: 491 LGSTKWRVNKRVLSVIDQIWAKGGGLADLVD-RKDVPLPEELDTEDEAEIRKWKWSVKNV 549
LG W+V+ V V + W G +A+ + +P E D AE R W +V +V
Sbjct: 704 LGKVPWKVHPDVFRVQIEAWNSGEEIANFAPLHPQIDVPPEPPAGDMAERRNWLKAVDDV 763
Query: 550 RKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 609
+ + HS+RC ++ VAR M +E Y+PHN+DFRGRAYP+ PYLNH+G+D RG+
Sbjct: 764 ENKRSGAHSKRCFQNFQMEVARAMLNET-IYFPHNMDFRGRAYPIPPYLNHMGADNVRGV 822
Query: 610 LEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKR 669
L F EG+PLG GL WLKIHLA + G DK R+ +TE+HLDDI+DS PL G+R
Sbjct: 823 LVFAEGKPLGDKGLRWLKIHLATV--AGYDKASMSERLQYTEDHLDDIYDSVRNPLNGRR 880
Query: 670 WWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAA 729
WWL+AED +Q LAAC L +AL SP P +S +P+ QDG+CNGLQHYAALG D++GA
Sbjct: 881 WWLKAEDSWQTLAACFELTKALDSPDPTKFLSTLPIQQDGTCNGLQHYAALGGDEIGARQ 940
Query: 730 VNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTS 789
VNL GD+PADVY+ +A V + + RDA K A+ L ++ RK VKQ VMT+
Sbjct: 941 VNLEPGDRPADVYTAVAEEVKKAVARDAAAGNKI------AQKLDGRLTRKCVKQPVMTN 994
Query: 790 VYGVTYIGARDQIKRRLK---ERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGW 846
VYGVT+ GA+ Q++R+L+ + DD L S Y A AL MF A++I W
Sbjct: 995 VYGVTFYGAKAQVQRQLEVLFPEVSRFDDISLQKMSLYVATEIFKALGSMFTGAQAIQNW 1054
Query: 847 LGDCA 851
LG CA
Sbjct: 1055 LGQCA 1059
>B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=SJAG_03014 PE=3
SV=1
Length = 1169
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 240/721 (33%), Positives = 369/721 (51%), Gaps = 74/721 (10%)
Query: 159 RQIKMETEAWEDAAREYQELL-EDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCK 217
RQ ME +A E + E++ E +R+ + P+ + +L W+E L I E +
Sbjct: 294 RQRLMEKKALESSIAEWRHSYNEILRRGENPPHSRSLNALLYVWYEKLEALIQEEFRQIE 353
Query: 218 DT----------RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQ 267
D+ R R + Y L +A IT+ +++ +TN +
Sbjct: 354 DSENNKASPYKSRTRAEYAQYLKLLSPSKLAAITVLEMLTF-VTNKRYCTGVRSTFALMS 412
Query: 268 IGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXX 327
+G A E E + + +K +A N D +
Sbjct: 413 VGRAFEKE-----YFSEQLQKIEAEGNLPKSVDSKKLFSSPRLFNSFVKKI--------- 458
Query: 328 XXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPP 387
++ + GIV+ ++PW VKV S + LLI++A I+ A
Sbjct: 459 --------RDNEDNGIVQS-SLYQPWSPNILVKVASVTVSLLINSAKIRDSA-------- 501
Query: 388 DIRPAFKHTLKNISTDSQNG-----SKRYGVIECDSLVQQGL--EKSARHMVIPYMPMLV 440
+ P K T+ S+ Q+G ++ GVI ++ L E S H+ +PMLV
Sbjct: 502 -LDPETKSTVFQDSSAFQHGYRYLAGRKVGVIVAHPVLYDILASELSGAHLPPYRLPMLV 560
Query: 441 PPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGSTKWRVN 499
P W ++ G Y + V+R + +Q +K A + QL + E L LG+ W+VN
Sbjct: 561 KPRPWLMWNSGGYYYSSESVLRFKESHEQLLYLKAASDSGQLKDLLEGLTALGNVGWKVN 620
Query: 500 KRVLSVIDQIWAKGGGLADL------VDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKEN 553
++V ++ +IW G + +D +++P + +D AE W +K +
Sbjct: 621 RKVYDMLVKIWNTGESFLSIPSANTTLDIQEMP-EKSIDPSARAE---WLRMLKERSLDF 676
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
+HSQRC+ L +A+ E FY+PHN+DFRGRAYP+ +L+H+ SD CR +L F
Sbjct: 677 ASQHSQRCEFNYTLEIAKAFLHE-TFYFPHNVDFRGRAYPIPSHLHHVNSDFCRSLLIFA 735
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
EG+PLG+ G WLK+ LANL+ G +K RI F +NHL DIF+S +KPL+G+++W +
Sbjct: 736 EGKPLGEEGFQWLKVQLANLF--GKNKSTIQERIDFVDNHLQDIFNSVDKPLDGEQFWTK 793
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
A+DPFQ LA C +A+A+RS P + +SH+PV QDG+CNGLQHYAALG D GA VNL
Sbjct: 794 ADDPFQALAVCFEIADAIRSGDPSSFISHVPVQQDGTCNGLQHYAALGGDPEGAREVNLE 853
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEK-DPKTNPNALHARNLINQVDRKLVKQTVMTSVYG 792
++P DVY+ +A RV+ I++++A DP A L ++V R ++KQ VMT+VYG
Sbjct: 854 PSNRPNDVYAAVAARVISILKKEAAAGDPM-------AELLKDRVTRTVIKQPVMTNVYG 906
Query: 793 VTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
VTY+GAR QI+++LK + I D L AS + AK +L+ +F+ A I WL DCA
Sbjct: 907 VTYVGARAQIEKQLKLQEDIPKDL-LRDASAFLAKRVFQSLRALFKRAHEIQDWLADCAA 965
Query: 853 V 853
+
Sbjct: 966 L 966
>H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletotrichum
higginsianum (strain IMI 349063) GN=CH063_04795 PE=3 SV=1
Length = 1400
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 292/514 (56%), Gaps = 37/514 (7%)
Query: 351 KPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGP------PDIRPAFKHTLKNISTDS 404
KPW + KVG+ L+ LI+TA I+ + + P +PAF H +
Sbjct: 542 KPWPVAVRAKVGAALLSALIETAKIK----VVKEHPETKALVSQYQPAFSHVSR-----L 592
Query: 405 QNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH 464
+ G K ++ LV + + ++PM+V P W +DKG +L + ++RI
Sbjct: 593 KKGKKTGMILLNKELVNIMKREPQGDYLAKHLPMVVEPEPWQAFDKGGFLESRANLVRIK 652
Query: 465 GAKQQRDAVKRAPVTQ--LNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADL-VD 521
+ + A + + ++ VF+ L+ LG T WRVN VL+V+ W G LA+L
Sbjct: 653 QGDKDQKLYSEAAIARGDMDQVFKGLDVLGKTPWRVNTPVLNVMLAAWNTGEALANLPAL 712
Query: 522 RKDVPLPEELD-TEDEAEIRKWKWSVKNVRKENNER---HSQRCDIELKLAVARKMKDED 577
++P+P E + T D R W V+ VR NER HS RC + +L +AR +++
Sbjct: 713 NPNIPIPREPEATNDPLAHRAW---VRAVRAAENERGGMHSVRCFMNFQLEIARAFRNQT 769
Query: 578 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGG 637
FY+PHN+DFRGRAYP+ YLNH+G+D RG+L F G+ LG+ GL WLK+H+AN++ G
Sbjct: 770 -FYFPHNIDFRGRAYPLPTYLNHMGADHVRGLLRFANGKELGEEGLKWLKVHVANVF--G 826
Query: 638 VDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPE 697
DK R +F ++L +IFDSAN PL+G RWWL+AEDP+QCLA C L AL SP P
Sbjct: 827 FDKASLKERESFAMDNLVNIFDSANNPLDGTRWWLKAEDPWQCLATCFELKAALESPEPT 886
Query: 698 TTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDA 757
+SH+PVHQDG+CNGLQHYAALG D GA VNL GD+PADVYS +A V E + +DA
Sbjct: 887 KFVSHLPVHQDGTCNGLQHYAALGGDSWGARQVNLEPGDKPADVYSAVANIVKEHIAKDA 946
Query: 758 EKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE---RCAIED 814
E + A L +++ RK+VKQTVMT+VYGVT+ GA+ Q+ ++L E
Sbjct: 947 ES------GNVIAVALRDKITRKVVKQTVMTNVYGVTFAGAKKQVCKQLDSLYPDLPKES 1000
Query: 815 DAQLFGASCYAAKTTLTALQEMFEAARSIMGWLG 848
S Y A AL MF A I WLG
Sbjct: 1001 GFDNIITSSYVATLVFKALSSMFRGAHDIQYWLG 1034
>M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (strain DJM 731)
GN=DACRYDRAFT_54516 PE=4 SV=1
Length = 988
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 244/725 (33%), Positives = 385/725 (53%), Gaps = 86/725 (11%)
Query: 159 RQIKMETEAWEDAAREYQELLEDMRKQKLAP-NLPYMK--SLFLGWFEPLRNAI-----V 210
RQ ME A+ AA+ ++ E+M +A N +MK W++ L+ +
Sbjct: 22 RQRLMEESAYMVAAQRWRHQAEEMTHHNVAGWNTQHMKLKKWMWNWYQALKERLDNEIPT 81
Query: 211 AEQELCKDTRLRLTHG----PYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGAS 266
E+E R + T G P+ L + MA +T+ +L+ T+ GV +A+ A
Sbjct: 82 LEEEEKLAQRRKPTDGDAIGPFLRLLSTEKMATMTISELLRY-GTSDGGVRTART---AI 137
Query: 267 QIGEAIEHEARI-YRFMEKTKKKTKATDNCEGE-SDLAPVKKGXXXXXXXXXXXXXXXXX 324
+G +E E ++++ EG ++LA ++
Sbjct: 138 TLGRVVEQEYNAEVALAQRSRGPDPVVLTSEGSLTELAAIR------------------- 178
Query: 325 XXXXXXXXXXQKNQQALGIVRGRDDWK-----PWGQEAQVKVGSCLMQLLIDTAYIQPPA 379
QQA R +D+ W Q + +VG L+ +ID A I
Sbjct: 179 -------------QQA----RDSEDFTMAIPPDWTQVIRGRVGGFLLNAVIDVATITRRG 221
Query: 380 NQ--IGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD-SLVQQGLEKSARHMVIP-Y 435
+ G+ + +PAF H + + ++ G+I+ + L +Q + + + P
Sbjct: 222 IRPSTGEEVSEEQPAFAHCYEFLH------GRKIGLIKFNPELTEQLSSEPIKDALHPRQ 275
Query: 436 MPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVT-QLNPVFEALNTLGST 494
+PML+PP W ++GAY++ + VMR + +Q ++ A L ++ AL+ LGST
Sbjct: 276 LPMLIPPRPWIDVERGAYMYSRTSVMRYKDSLEQSSFLRSASSAGHLESMYAALDVLGST 335
Query: 495 KWRVNKRVLSVIDQIWAKGGGLADL----VDRKDVPLPEELDTEDEAEIRKWKWSVKNVR 550
W +N+ + V+ +W G A + ++ +D P+ +T+ +A+ R + ++
Sbjct: 336 PWTINRPIFDVVIAVWNSGKQFAKIPPAGLEGEDPVKPDNYETDPKAK-RDFVRAMSTSI 394
Query: 551 KENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 610
++ +E HS RCD KL +AR E FY+PHN+DFRGRAYP+ P LNH+G DLCRG+L
Sbjct: 395 QKRHENHSMRCDTNYKLEIARAFLGER-FYFPHNVDFRGRAYPVPPNLNHMGDDLCRGLL 453
Query: 611 EFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRW 670
F + + LG+ GL WLKIH AN + G DK ++ R+ +T HLD+I+DSA KPL+G+RW
Sbjct: 454 TFADKKALGERGLRWLKIHAANKF--GYDKASFEERVTWTMEHLDEIYDSAKKPLDGQRW 511
Query: 671 WLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 730
WL+A+DP+Q LA+CI L AL SP P S +PVHQDG+CNGLQHYAALG D GA V
Sbjct: 512 WLKADDPWQFLASCIELHNALESPNPAEFESSLPVHQDGTCNGLQHYAALGGDGQGARQV 571
Query: 731 NLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSV 790
NL GD+PADVY+ +A V + + A K + A+ L ++ RK+VKQTVMT+V
Sbjct: 572 NLDVGDRPADVYTFVANMVEKRLDEAAAKGDE------KAKWLQGRIARKVVKQTVMTTV 625
Query: 791 YGVTYIGARDQIKRRLKERCAIE-DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGD 849
YGVT++GARDQI+++++ + + + + + Y A+ TL+ + ++F A+SI WL
Sbjct: 626 YGVTFVGARDQIRKQIEALPGVSISEQESYAMAVYVARLTLSCIGDLFGGAKSIQLWLNK 685
Query: 850 -CAKV 853
CA +
Sbjct: 686 VCALI 690
>E9EXQ5_METAR (tr|E9EXQ5) DNA-directed RNA polymerase OS=Metarhizium anisopliae
(strain ARSEF 23 / ATCC MYA-3075) GN=MAA_04804 PE=3 SV=1
Length = 1326
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 206/516 (39%), Positives = 300/516 (58%), Gaps = 39/516 (7%)
Query: 351 KPWGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQ 405
+PW + +VGS L++ LID A+++ P Q +PAF H
Sbjct: 482 EPWSISIRAQVGSFLLKTLIDNAFVKVTMEHPTTKQTISQK---QPAFTHM------QQP 532
Query: 406 NGSKRYGVIECDS-LVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH 464
K+ GV+ +S LVQQ ++ + ++PM+V P W ++G +L + +R+
Sbjct: 533 RRGKKVGVLHYNSNLVQQLKKEPIGDYIAKHLPMIVEPKPWRQLNEGGFLDSRTTFVRVK 592
Query: 465 GAKQQRDAVKRAPVT--QLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD- 521
++ A + + VF+ L+ LG T WR+NK VL+V+ + W G +A++
Sbjct: 593 SGDVEQKLYTEAAIKTGDMAQVFKGLDVLGKTAWRINKNVLNVMMEAWNSGEEIANMPPL 652
Query: 522 RKDVPLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFY 580
+ +PEE D+ + +R+ W +VK + E + HSQRC + L+L +AR +++ Y
Sbjct: 653 NPEFHIPEEPDSSADPLLRRSWMQAVKAIENERSGMHSQRCFMNLQLEIARAFRNQT-MY 711
Query: 581 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDK 640
+PHN+D+RGRAYPM YLNH+G+D R +L+F G+ LG+ GL WLKIHLANLY G+DK
Sbjct: 712 FPHNIDYRGRAYPMPTYLNHMGADHARAVLKFARGKELGERGLRWLKIHLANLY--GLDK 769
Query: 641 LCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTM 700
+D R AFT +++ +I DSA+ PL G RWWL+AED +QCLAAC L AL P P +
Sbjct: 770 SSFDEREAFTNDNIPNIIDSASNPLNGSRWWLKAEDAWQCLAACFELKAALELPDPTKFV 829
Query: 701 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKD 760
S +PVHQDG+CNGLQHYAALG D GA VNL G++PADVYS +A V + + +DAE +
Sbjct: 830 SQLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGERPADVYSAVADLVKQAIDKDAEAE 889
Query: 761 PKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR-------LKERCAIE 813
+ A L ++ RK+VKQTVMT+VYGVT+ GA+ Q+ ++ L + C I
Sbjct: 890 NE------FALVLQGKITRKVVKQTVMTNVYGVTFAGAKKQVCKQIDALYPDLGKECGIP 943
Query: 814 DDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGD 849
+ S Y A+ AL MF A I WLG+
Sbjct: 944 N----LVLSTYIARLIFNALATMFRGAHDIQYWLGE 975
>G0RQ42_HYPJQ (tr|G0RQ42) DNA-directed RNA polymerase OS=Hypocrea jecorina
(strain QM6a) GN=TRIREDRAFT_79947 PE=3 SV=1
Length = 1298
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 301/515 (58%), Gaps = 37/515 (7%)
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPA--NQIGDGPPDIRPAFKHTLKNISTDSQNGSK 409
PW + + +VGS L+Q+L+++A I ++ + +PAF H + + G K
Sbjct: 466 PWSLQIKAQVGSILLQMLMESAKINVVVERSESKELISQYQPAFNH-----QSVLRKGKK 520
Query: 410 RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQ 468
+ LV+Q + + ++PM+V P W + +G +L + +R+ G +
Sbjct: 521 VGALFFNTRLVEQLKREPVGDFIAKHIPMVVEPKPWQSFTEGGFLDSTTSFVRVKPGDVE 580
Query: 469 QR----DAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD-RK 523
Q+ A+KR +TQ VF+ L+ LG T W +NK L+V+ + W G +A++
Sbjct: 581 QKLYSNAAIKRGDMTQ---VFKGLDVLGKTPWIINKDTLNVMMEAWNSGEEIANIPPLNP 637
Query: 524 DVPLPEELDTEDEAEIRK-WKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYP 582
++ +P E D+ + +RK W +VK + E + HSQRC + L+L +AR +++ Y+P
Sbjct: 638 NLTIPPEPDSSADPLVRKNWIRAVKAIENERSGLHSQRCFMNLQLEIARAFRNQT-IYFP 696
Query: 583 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLC 642
HN+D+RGRAYPM YLNH+G+D R IL+F G+ LG GL WLKIHLAN+Y G+DK
Sbjct: 697 HNVDYRGRAYPMPTYLNHMGADHARAILKFARGKELGVRGLRWLKIHLANVY--GLDKAS 754
Query: 643 YDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSH 702
+D R AF + ++ +I DSA PL G RWWL+ EDP+QCL+AC L AL P P +SH
Sbjct: 755 FDEREAFADENVANIIDSATNPLNGSRWWLKGEDPWQCLSACFELKAALELPDPTKFVSH 814
Query: 703 MPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPK 762
+PVHQDG+CNGLQHYAALG D GA VNL GD+PADVYS +A V + + +D E
Sbjct: 815 LPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGDRPADVYSAVADLVKQAIAKDKE---- 870
Query: 763 TNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRR-------LKERCAIEDD 815
N NA A L ++ RK+VKQTVMT+VYGVT+ GA+ QI ++ L E+ I +
Sbjct: 871 -NGNAF-AEALDGKITRKVVKQTVMTNVYGVTFSGAKKQICKQIDALYPDLGEKVGISN- 927
Query: 816 AQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDC 850
S Y AK AL MF+ A I WLG+
Sbjct: 928 ---MLLSTYIAKQVFQALATMFKGAHDIQYWLGEI 959
>F9XJE6_MYCGM (tr|F9XJE6) DNA-directed RNA polymerase OS=Mycosphaerella
graminicola (strain CBS 115943 / IPO323)
GN=MYCGRDRAFT_47599 PE=3 SV=1
Length = 1299
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 247/732 (33%), Positives = 363/732 (49%), Gaps = 64/732 (8%)
Query: 149 TSYKYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPY--MKSLFLGWFEPLR 206
T K +RQI +E + E A +++ E++RK+ ++ + M S+ W + L
Sbjct: 241 TEEKENRAAQRQIALERTSVEVAVERWKKADEELRKKGISTAMQTKDMSSMMWQWHQQLL 300
Query: 207 NAIVAEQELCKDTRL-------RLTHGPYFNELPADMMAVITMHKLMGLLM---TNTNGV 256
A+ E E + R +GP+ LP + +A T+ M + +T+G
Sbjct: 301 PALKQELEEVQKEMADPGREHDRHLYGPFLELLPLEHIAATTIMVAMSSIAHGKKDTSGQ 360
Query: 257 --GSAKVVQGASQIGEAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXX 314
K+ S +G IE + + + ++++ K + +KK
Sbjct: 361 YETDVKLSHLVSALGNTIESDCKAEKAGSQSRRGAKKARSA------GRLKKSAANPALE 414
Query: 315 XXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAY 374
N++ L + W + K+G+ L+ L++TA
Sbjct: 415 APDADKTSASKGKPKKP----SNKELLAELE-------WSNPVKFKLGAMLISKLVETAK 463
Query: 375 I-----QPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRYGVIECD-SLVQQGLEKSA 428
+ P ++ + ++PA H +K I KR G I + LV++ +
Sbjct: 464 LACRREHPRTKEMIE---QMQPALLHQMKWIR------GKRQGTIAPNVELVKKLSSEPI 514
Query: 429 RHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIH-GAKQQRD----AVKRAPVTQLNP 483
++ MPM+V P W G++ G YL PS ++R+ G KQ + A +R L
Sbjct: 515 PALIAKRMPMVVRPKPWKGWEDGGYLRFPSPILRLPVGDKQGKSYFLAAAERNEGKDLET 574
Query: 484 VFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVD-RKDVPLPEELDTEDEAEIRKW 542
V+ L L S WRV+ V V W G +A+ R LP E ++ D AE RKW
Sbjct: 575 VYRGLTALSSVPWRVHPGVFKVQLDAWNSGEEIANFAPLRPATDLPPEPESTDFAERRKW 634
Query: 543 KWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 602
+R + HS+RC +L +AR + +E Y+PHNLDFRGRAYP+ PYLNH+G
Sbjct: 635 LAQCHEIRNKATGLHSKRCFQNFQLEIARTIVNET-IYFPHNLDFRGRAYPIPPYLNHMG 693
Query: 603 SDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSAN 662
+D RG+L F +G+ LG+ GL WLK HLA + G DK R+ FTE HLDDI+DS
Sbjct: 694 ADNVRGLLVFADGKELGEKGLRWLKTHLATV--AGHDKASMQERLDFTEAHLDDIYDSVR 751
Query: 663 KPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGR 722
PL G+RWWLEA+D +Q LAAC L AL SP P +SH+PV QDG+CNGLQHYAALG
Sbjct: 752 NPLTGRRWWLEADDAWQTLAACFELTAALDSPDPTKFVSHLPVQQDGTCNGLQHYAALGG 811
Query: 723 DKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLV 782
D+ GAA VNL D+PADVY+ +A V AE D L A+ L ++ RK V
Sbjct: 812 DRAGAAQVNLEPSDRPADVYTAVADAV------KAEVDKDAAEGNLVAQVLQGRLTRKCV 865
Query: 783 KQTVMTSVYGVTYIGARDQIKRRLK---ERCAIEDDAQLFGASCYAAKTTLTALQEMFEA 839
KQ VMT+VYGVT+ GA++Q++++L+ + S Y A +L +MF+
Sbjct: 866 KQPVMTNVYGVTFYGAKEQVRKQLEVLFPEVGPYGPVNMGNMSHYVATKIFKSLGDMFKG 925
Query: 840 ARSIMGWLGDCA 851
A+SI WLG CA
Sbjct: 926 AQSIQAWLGQCA 937
>M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphophorus maculatus
GN=POLRMT PE=3 SV=1
Length = 1321
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 196/430 (45%), Positives = 264/430 (61%), Gaps = 28/430 (6%)
Query: 436 MPMLVPPNNWTGYDKGAYLFLPSYVMRI-HGAKQQRDAVKRAPVTQLNPVFEALNTLGST 494
MPML PP WT GAYL P+ +MR HGA Q + +++ P L+PVF++LN L +
Sbjct: 733 MPMLCPPVPWTSEKFGAYLLTPAKLMRTTHGATQHEELLEKCP--NLHPVFDSLNQLSNC 790
Query: 495 KWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLP-------EELDTEDEA----EIRKWK 543
W +NK +L +I I+ G D+ D+P P + +D A E K
Sbjct: 791 AWMINKPILDIIISIFNDRGS-----DKLDIPPPLSEAPKIPHFNPQDPAYTASEKAHMK 845
Query: 544 WSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGS 603
V N +K+ +E HS R D KL++A M+D+ F++PHN+DFRGR YP PY NHLGS
Sbjct: 846 REVINAKKKCSEMHSLRMDALYKLSIAHHMRDK-LFWFPHNMDFRGRTYPCPPYFNHLGS 904
Query: 604 DLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANK 663
D+ R L F EG+PLG GL WLKIHL NL G + GR+ + ++ ++DI DSA+
Sbjct: 905 DVTRATLMFAEGKPLGPKGLDWLKIHLVNL-TGLKKRSSLQGRLEYADSIMEDILDSADN 963
Query: 664 PLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRD 723
PL GK+WW+EA++P+Q LA C+ +A A+RSP P +SH PVHQDGSCNGLQHYAALGRD
Sbjct: 964 PLNGKKWWMEADEPWQALACCMEIANAVRSPDPTKFVSHFPVHQDGSCNGLQHYAALGRD 1023
Query: 724 KLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVK 783
+GA +VNL+ + P DVYSG+A +V E+ RDA K K A+ L + RK+VK
Sbjct: 1024 VIGATSVNLMPCEVPQDVYSGVAQQVEELRTRDAAKGLKI------AQVLEGFISRKVVK 1077
Query: 784 QTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSI 843
QTVMT VYGVT G R QI++RLKE + ++ AS Y + + L+EMF R I
Sbjct: 1078 QTVMTVVYGVTRYGGRLQIEKRLKEIDEFPKE-HVWDASHYLVRLVFSGLKEMFTGTREI 1136
Query: 844 MGWLGDCAKV 853
WL + A++
Sbjct: 1137 QDWLTESARL 1146
>I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0G03490 PE=3 SV=1
Length = 1352
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 293/511 (57%), Gaps = 32/511 (6%)
Query: 353 WGQEAQVKVGSCLMQLLIDTAYIQ-----PPANQIGDGPPDIRPAFKHTLKNISTDSQNG 407
W Q A+ ++GS ++ L+ A + P N+ G PAF H S NG
Sbjct: 597 WPQAARAQIGSIMISTLLHVAKVNVRGHDPKTNKYVYGE---LPAFSH-----SYQYHNG 648
Query: 408 SKRYGVIEC-DSLVQQ-GLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHG 465
+K GV++ SL++Q E+ A + MPM+V P W ++ G Y + S ++R
Sbjct: 649 AK-IGVLKIHKSLIKQLNGERLATSVQPQQMPMIVKPRKWVSWNSGGYHYSQSILIRTRD 707
Query: 466 AKQQRDAVKRAPVTQLNP-VFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKD 524
+ +Q +K L P ++ LN +G T W VN++V +V+ ++W G D+ +D
Sbjct: 708 SPEQVAYLKAVSEENLIPTIYSGLNVIGLTGWTVNRKVFNVLSEVWNTGKQFLDIPGIQD 767
Query: 525 --VPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYP 582
V LP + E+R+WK K + + + S RCD KL +AR E Y+P
Sbjct: 768 DMVVLPPLPSNAEPEEVREWKLKNKEIANKISSDRSVRCDSNYKLEIARAFLGE-KIYFP 826
Query: 583 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLC 642
HNLDFRGRAYP+ P+ NHLG+D+ RG+L F +GR LG GL WLK+HLANL+ G DK
Sbjct: 827 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGRRLGPQGLKWLKVHLANLF--GYDKAS 884
Query: 643 YDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSH 702
D RIAF H++D+ DSA PL+GK WW A+ P+Q LA C+ L EA + PE +SH
Sbjct: 885 LDDRIAFANQHIEDLKDSAEHPLDGKGWWQSADKPWQALATCMELNEAFKLENPEDFISH 944
Query: 703 MPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPK 762
PVHQDG+CNGLQHYAALG D GA VNL+ +P DVY+ +A V + A++ +
Sbjct: 945 QPVHQDGTCNGLQHYAALGGDVEGAIQVNLVPSPKPQDVYNHVAKLVEARLDVAAKEGDE 1004
Query: 763 TNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQL-FGA 821
T A+ L ++ RK+VKQTVMT+VYGVT+IGA QI ++L E+ DD QL F
Sbjct: 1005 T------AKILQGKITRKVVKQTVMTNVYGVTFIGATRQIAKQLTEKF---DDKQLAFEY 1055
Query: 822 SCYAAKTTLTALQEMFEAARSIMGWLGDCAK 852
Y AK A++E F+ A I WLG+C+K
Sbjct: 1056 GGYLAKHVFAAIRESFKGAHEIQDWLGECSK 1086
>Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) OS=Acanthamoeba
castellanii PE=2 SV=1
Length = 512
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/360 (50%), Positives = 247/360 (68%), Gaps = 12/360 (3%)
Query: 496 WRVNKRVLSVIDQIWAKGGGLADLVDRKDVP-LPEELDTEDEAEIR-KWKWSVKNVRKEN 553
+ +N R+ VI + W GGG+ADL R ++P L D + E++ K+ K + N
Sbjct: 4 FSINNRMHEVICEAWDNGGGIADLPSRTNLPELEPPADYYSDLEVKQKFDRERKKAKIAN 63
Query: 554 NERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFG 613
HS RCD+ KL VA++ +D FYYPHN+DFRGR YP+ P+LNHLG DLCRG+L F
Sbjct: 64 YNLHSLRCDVTYKLQVAKECQDRT-FYYPHNMDFRGRTYPIPPHLNHLGQDLCRGLLTFA 122
Query: 614 EGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLE 673
EG+PLG+SGL WLK+HLAN++ G DK+ ++ R+ F EN+++ I DSA+ PL G+RWWL+
Sbjct: 123 EGKPLGESGLRWLKVHLANVF--GNDKITFEDRVRFVENNMEHIMDSASNPLGGQRWWLK 180
Query: 674 AEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLI 733
A+ P+QCLAA I L A S PET +S +P+HQDGSCNGLQHYAALG D++GA VNL+
Sbjct: 181 ADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDGSCNGLQHYAALGGDEMGARQVNLL 240
Query: 734 GGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGV 793
++P DVYSG+ V+ + DA + A+ L+ +VDRK++KQTVMTSVYGV
Sbjct: 241 PSERPQDVYSGVVELVVRRLEDDAANGVEI------AQRLLGKVDRKVIKQTVMTSVYGV 294
Query: 794 TYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
T+IGAR QI+ LK++ + DD +F AS Y A +T ++++EMF AR IM WL DCA +
Sbjct: 295 TFIGARQQIENALKDKGKVSDD-DMFLASRYLATSTFSSIKEMFSGAREIMTWLSDCATL 353