Miyakogusa Predicted Gene

Lj4g3v0804570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0804570.1 Non Chatacterized Hit- tr|B9SNM3|B9SNM3_RICCO
Putative uncharacterized protein (Fragment) OS=Ricinus,58.82,0.00004,
,CUFF.48074.1
         (88 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M1DKS7_SOLTU (tr|M1DKS7) Uncharacterized protein (Fragment) OS=S...    57   3e-06

>M1DKS7_SOLTU (tr|M1DKS7) Uncharacterized protein (Fragment) OS=Solanum tuberosum
           GN=PGSC0003DMG400040185 PE=4 SV=1
          Length = 260

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 45  RGRRTKMAKNRAKGTCHNCDESYSIGHKCKRLFWIEVPD 83
           R  R +MA+ RAK  C+NCDE YS+ H+CKRL W+E+ D
Sbjct: 136 RLTRVEMAEKRAKRLCYNCDEQYSVTHQCKRLLWLELDD 174