Miyakogusa Predicted Gene

Lj4g3v0496580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0496580.1 tr|B9I1P1|B9I1P1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_568745 PE=4
SV=1,32.65,0.003,seg,NULL,CUFF.47502.1
         (110 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7JPP7_MEDTR (tr|G7JPP7) Putative uncharacterized protein OS=Med...   100   2e-19

>G7JPP7_MEDTR (tr|G7JPP7) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_4g087870 PE=4 SV=1
          Length = 221

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 66/99 (66%), Gaps = 9/99 (9%)

Query: 19  VSETRPLRNHDXXXXXX-XXXXXXXXTVKHYLYPGSEGRSLAK-------KRAKVSFSIG 70
           VSETRPLRNH                TVKHYLY GS+GRSLAK         AKVSFSIG
Sbjct: 19  VSETRPLRNHGPFSFHFPATSSLFLGTVKHYLYSGSKGRSLAKIDHKILKTSAKVSFSIG 78

Query: 71  FRNSNNATRSKYYQPSRVSPGGPDSHHHFETTGSGGHGR 109
           FR SN ATR++Y++P RVSPGGPD+HHHF+ T +G H R
Sbjct: 79  FRESN-ATRNRYFKPLRVSPGGPDAHHHFKVTCTGYHNR 116