Miyakogusa Predicted Gene

Lj4g3v0353460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0353460.1 tr|G7L5N1|G7L5N1_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g078040 PE=4 SV=1,67.86,0.000000000004,F-box,F-box
domain, cyclin-like; no description,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; FBOX,F-box do,88081_g.1
         (84 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7I8L0_MEDTR (tr|G7I8L0) F-box protein OS=Medicago truncatula GN...    63   5e-08
G7L5N1_MEDTR (tr|G7L5N1) F-box protein OS=Medicago truncatula GN...    62   7e-08
G7I9U7_MEDTR (tr|G7I9U7) F-box family protein OS=Medicago trunca...    62   8e-08
B7FM52_MEDTR (tr|B7FM52) Uncharacterized protein OS=Medicago tru...    62   9e-08
I3SIY9_LOTJA (tr|I3SIY9) Uncharacterized protein OS=Lotus japoni...    61   1e-07
G7L4G6_MEDTR (tr|G7L4G6) F-box OS=Medicago truncatula GN=MTR_7g0...    58   2e-06
G7L5N2_MEDTR (tr|G7L5N2) F-box protein OS=Medicago truncatula GN...    57   2e-06
G7L6N2_MEDTR (tr|G7L6N2) F-box family protein OS=Medicago trunca...    56   4e-06

>G7I8L0_MEDTR (tr|G7I8L0) F-box protein OS=Medicago truncatula GN=MTR_1g058760
          PE=4 SV=1
          Length = 83

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYS-TRNADFAAHFRSLK 67
          +LSFLPV+SL+RF+SVSK W + IS   F+KLHLH+S S TRN+ F    ++LK
Sbjct: 19 VLSFLPVRSLIRFRSVSKCWKTLISDPTFVKLHLHKSQSQTRNSLFPIIMQNLK 72


>G7L5N1_MEDTR (tr|G7L5N1) F-box protein OS=Medicago truncatula GN=MTR_7g078040
          PE=4 SV=1
          Length = 445

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYSTRNADF 59
          +LSFLPVKSLVR K VSKSW S IS   F+KLHL+RS STRN  F
Sbjct: 17 LLSFLPVKSLVRLKCVSKSWKSLISDPSFVKLHLNRS-STRNPLF 60


>G7I9U7_MEDTR (tr|G7I9U7) F-box family protein OS=Medicago truncatula
          GN=MTR_1g015730 PE=4 SV=1
          Length = 396

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 1/46 (2%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYS-TRNADF 59
          +LSFLPV+SLVRF+ VSKSW + IS S F+KLHLH S S TRN+  
Sbjct: 17 VLSFLPVRSLVRFRCVSKSWKTLISDSTFVKLHLHNSRSQTRNSSL 62


>B7FM52_MEDTR (tr|B7FM52) Uncharacterized protein OS=Medicago truncatula PE=2
          SV=1
          Length = 327

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 36/46 (78%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYSTRNADFA 60
          +LSFLPVKSLVRFK V+K+W + IS   F+KLHL+RS STRN  F 
Sbjct: 17 LLSFLPVKSLVRFKCVNKAWKTLISDPTFVKLHLNRSSSTRNPLFT 62


>I3SIY9_LOTJA (tr|I3SIY9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 229

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 36/45 (80%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYSTRNADF 59
          ILS+LPVKSL++F+ VSK+W SFIS  QF+KLHL    S RNADF
Sbjct: 17 ILSWLPVKSLLQFRVVSKTWKSFISDPQFVKLHLLHRLSFRNADF 61


>G7L4G6_MEDTR (tr|G7L4G6) F-box OS=Medicago truncatula GN=MTR_7g060940 PE=4
          SV=1
          Length = 402

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 2/42 (4%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYSTRN 56
          +LSFLPVKSL+R K V KSW   IS S F++LHLHR  STRN
Sbjct: 30 LLSFLPVKSLMRMKCVCKSWKIIISNSSFVELHLHR--STRN 69


>G7L5N2_MEDTR (tr|G7L5N2) F-box protein OS=Medicago truncatula GN=MTR_7g078050
          PE=4 SV=1
          Length = 249

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYSTRNADFA 60
          +LSFLPVKS VRFK V KSW + IS   F+KLHL++S STRN  F 
Sbjct: 14 LLSFLPVKSPVRFKCVCKSWKTLISNPNFVKLHLNQS-STRNPLFT 58


>G7L6N2_MEDTR (tr|G7L6N2) F-box family protein OS=Medicago truncatula
          GN=MTR_7g078940 PE=4 SV=1
          Length = 403

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 31/42 (73%)

Query: 15 ILSFLPVKSLVRFKSVSKSWNSFISGSQFIKLHLHRSYSTRN 56
          ILS LPV SLVRF  VSKSW + I    F+KLHL+RS STRN
Sbjct: 40 ILSLLPVISLVRFTCVSKSWKTLIFDPTFVKLHLNRSSSTRN 81