Miyakogusa Predicted Gene

Lj4g3v0189750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189750.1 Non Chatacterized Hit- tr|I1K392|I1K392_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.05,3e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; DNA2/NAM7 HELICASE FAMILY,NULL,CUFF.46616.1
         (61 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7KVG6_SOYBN (tr|K7KVG6) Uncharacterized protein OS=Glycine max ...    61   1e-07
K7N1F5_SOYBN (tr|K7N1F5) Uncharacterized protein (Fragment) OS=G...    59   9e-07

>K7KVG6_SOYBN (tr|K7KVG6) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 576

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/61 (50%), Positives = 40/61 (65%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVGEDIE 60
           M YR LVCAPTN+AIKEVASRV+++V+ S    S              N+ERLK+GEDI+
Sbjct: 82  MKYRVLVCAPTNIAIKEVASRVVTLVKESHAKESGDLFCSMGDLLLSGNNERLKIGEDIK 141

Query: 61  E 61
           +
Sbjct: 142 D 142


>K7N1F5_SOYBN (tr|K7N1F5) Uncharacterized protein (Fragment) OS=Glycine max PE=4
           SV=1
          Length = 1498

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVGEDIE 60
           M YR LVCAPTNVAIKEVASRV+ I++ +    S               +ERLK+GED+E
Sbjct: 253 MKYRVLVCAPTNVAIKEVASRVVDIMKEAHSKESGDLFCSMGEVLLFGYNERLKIGEDVE 312

Query: 61  E 61
           +
Sbjct: 313 D 313