Miyakogusa Predicted Gene
- Lj3g3v3690100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3690100.1 Non Chatacterized Hit- tr|I3SNH2|I3SNH2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.25,0,FMN-linked oxidoreductases,NULL; seg,NULL; no
description,Aldolase-type TIM barrel; Dus,tRNA-dihydro,CUFF.46215.1
(400 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I3SNH2_LOTJA (tr|I3SNH2) Uncharacterized protein OS=Lotus japoni... 801 0.0
I1KRM3_SOYBN (tr|I1KRM3) Uncharacterized protein OS=Glycine max ... 705 0.0
B7FNH4_MEDTR (tr|B7FNH4) Putative uncharacterized protein OS=Med... 684 0.0
K7LI80_SOYBN (tr|K7LI80) tRNA-dihydrouridine synthase OS=Glycine... 613 e-173
M5X077_PRUPE (tr|M5X077) Uncharacterized protein OS=Prunus persi... 611 e-172
K7KQ17_SOYBN (tr|K7KQ17) tRNA-dihydrouridine synthase (Fragment)... 600 e-169
B9RVP7_RICCO (tr|B9RVP7) tRNA-dihydrouridine synthase OS=Ricinus... 597 e-168
M1A906_SOLTU (tr|M1A906) Uncharacterized protein OS=Solanum tube... 579 e-163
D7LTR8_ARALL (tr|D7LTR8) Putative uncharacterized protein OS=Ara... 577 e-162
K4AYB9_SOLLC (tr|K4AYB9) Uncharacterized protein OS=Solanum lyco... 576 e-162
B9GFD0_POPTR (tr|B9GFD0) tRNA-dihydrouridine synthase OS=Populus... 574 e-161
Q8LFT6_ARATH (tr|Q8LFT6) Putative uncharacterized protein OS=Ara... 573 e-161
Q8H128_ARATH (tr|Q8H128) FMN-linked oxidoreductase-like protein ... 573 e-161
B9HNQ6_POPTR (tr|B9HNQ6) tRNA-dihydrouridine synthase OS=Populus... 568 e-159
K4AYC0_SOLLC (tr|K4AYC0) tRNA-dihydrouridine synthase OS=Solanum... 565 e-158
Q9FI41_ARATH (tr|Q9FI41) tRNA-dihydrouridine synthase OS=Arabido... 561 e-157
M4F8V5_BRARP (tr|M4F8V5) tRNA-dihydrouridine synthase OS=Brassic... 561 e-157
D7MKC9_ARALL (tr|D7MKC9) tRNA-dihydrouridine synthase OS=Arabido... 559 e-157
R0EXD6_9BRAS (tr|R0EXD6) Uncharacterized protein OS=Capsella rub... 555 e-155
A2XRC7_ORYSI (tr|A2XRC7) Putative uncharacterized protein OS=Ory... 549 e-154
A8MRX7_ARATH (tr|A8MRX7) tRNA-dihydrouridine synthase OS=Arabido... 545 e-152
Q9LY64_ARATH (tr|Q9LY64) Putative uncharacterized protein MAA21_... 544 e-152
K3Y7H3_SETIT (tr|K3Y7H3) Uncharacterized protein OS=Setaria ital... 544 e-152
J3LWF3_ORYBR (tr|J3LWF3) tRNA-dihydrouridine synthase OS=Oryza b... 538 e-150
B4FSX3_MAIZE (tr|B4FSX3) Uncharacterized protein OS=Zea mays PE=... 536 e-150
Q0JEG3_ORYSJ (tr|Q0JEG3) tRNA-dihydrouridine synthase OS=Oryza s... 534 e-149
Q01LS4_ORYSA (tr|Q01LS4) tRNA-dihydrouridine synthase OS=Oryza s... 534 e-149
I1IWD5_BRADI (tr|I1IWD5) Uncharacterized protein OS=Brachypodium... 531 e-148
C5YDS7_SORBI (tr|C5YDS7) tRNA-dihydrouridine synthase OS=Sorghum... 520 e-145
G7IWU8_MEDTR (tr|G7IWU8) tRNA-dihydrouridine synthase OS=Medicag... 518 e-144
K7KQ19_SOYBN (tr|K7KQ19) tRNA-dihydrouridine synthase (Fragment)... 505 e-140
I1IWD8_BRADI (tr|I1IWD8) Uncharacterized protein OS=Brachypodium... 501 e-139
I1PJT9_ORYGL (tr|I1PJT9) Uncharacterized protein OS=Oryza glaber... 476 e-132
M4DI26_BRARP (tr|M4DI26) tRNA-dihydrouridine synthase OS=Brassic... 469 e-130
K7KQ18_SOYBN (tr|K7KQ18) Uncharacterized protein (Fragment) OS=G... 468 e-129
I1IWE0_BRADI (tr|I1IWE0) Uncharacterized protein OS=Brachypodium... 461 e-127
N1QXG6_AEGTA (tr|N1QXG6) tRNA-dihydrouridine synthase A OS=Aegil... 459 e-126
K7KQ20_SOYBN (tr|K7KQ20) Uncharacterized protein (Fragment) OS=G... 457 e-126
I1IWD7_BRADI (tr|I1IWD7) tRNA-dihydrouridine synthase OS=Brachyp... 456 e-126
I1IWD9_BRADI (tr|I1IWD9) tRNA-dihydrouridine synthase OS=Brachyp... 455 e-125
A9U5E7_PHYPA (tr|A9U5E7) Predicted protein OS=Physcomitrella pat... 454 e-125
D8SUW1_SELML (tr|D8SUW1) tRNA-dihydrouridine synthase OS=Selagin... 429 e-117
I1IWD6_BRADI (tr|I1IWD6) tRNA-dihydrouridine synthase OS=Brachyp... 423 e-116
A9RCX2_PHYPA (tr|A9RCX2) tRNA-dihydrouridine synthase OS=Physcom... 420 e-115
D8RYN8_SELML (tr|D8RYN8) tRNA-dihydrouridine synthase OS=Selagin... 419 e-114
R0H9Q3_9BRAS (tr|R0H9Q3) Uncharacterized protein (Fragment) OS=C... 399 e-108
C0PDX7_MAIZE (tr|C0PDX7) tRNA-dihydrouridine synthase OS=Zea may... 392 e-106
C0Z2A1_ARATH (tr|C0Z2A1) AT3G63510 protein OS=Arabidopsis thalia... 367 6e-99
I0YUC4_9CHLO (tr|I0YUC4) Dus-domain-containing protein OS=Coccom... 344 4e-92
M0X4X1_HORVD (tr|M0X4X1) Uncharacterized protein OS=Hordeum vulg... 341 3e-91
E1ZGG3_CHLVA (tr|E1ZGG3) tRNA-dihydrouridine synthase OS=Chlorel... 340 5e-91
Q7XWZ9_ORYSJ (tr|Q7XWZ9) OSJNBa0079F16.4 protein OS=Oryza sativa... 333 7e-89
B9FE76_ORYSJ (tr|B9FE76) Putative uncharacterized protein OS=Ory... 332 2e-88
C1FGA1_MICSR (tr|C1FGA1) Predicted protein (Fragment) OS=Micromo... 328 2e-87
M0X4X3_HORVD (tr|M0X4X3) Uncharacterized protein OS=Hordeum vulg... 328 2e-87
Q012U0_OSTTA (tr|Q012U0) Nitrogen regulation family protein (ISS... 325 1e-86
R7QF05_CHOCR (tr|R7QF05) Stackhouse genomic scaffold, scaffold_2... 324 3e-86
A4S1U7_OSTLU (tr|A4S1U7) tRNA-dihydrouridine synthase (Fragment)... 323 8e-86
M0X4W5_HORVD (tr|M0X4W5) Uncharacterized protein OS=Hordeum vulg... 322 2e-85
M1V8B3_CYAME (tr|M1V8B3) Uncharacterized protein OS=Cyanidioschy... 313 5e-83
M0X4W4_HORVD (tr|M0X4W4) Uncharacterized protein OS=Hordeum vulg... 309 1e-81
K8EP49_9CHLO (tr|K8EP49) tRNA-dihydrouridine synthase A OS=Bathy... 306 7e-81
D7FQR5_ECTSI (tr|D7FQR5) FAD binding / catalytic/ tRNA dihydrour... 306 1e-80
C1MRW1_MICPC (tr|C1MRW1) tRNA-dihydrouridine synthase (Fragment)... 304 3e-80
K3X2Z4_PYTUL (tr|K3X2Z4) tRNA-dihydrouridine synthase OS=Pythium... 303 1e-79
M8ADJ6_TRIUA (tr|M8ADJ6) tRNA-dihydrouridine synthase A OS=Triti... 303 1e-79
M0X4W7_HORVD (tr|M0X4W7) Uncharacterized protein OS=Hordeum vulg... 302 1e-79
M0X4X6_HORVD (tr|M0X4X6) Uncharacterized protein OS=Hordeum vulg... 298 3e-78
M0SG42_MUSAM (tr|M0SG42) Uncharacterized protein OS=Musa acumina... 293 9e-77
K8YNP2_9STRA (tr|K8YNP2) Uncharacterized protein OS=Nannochlorop... 289 1e-75
F0W6D1_9STRA (tr|F0W6D1) tRNAdihydrouridine synthase putative OS... 280 8e-73
M2XBM6_GALSU (tr|M2XBM6) tRNA-dihydrouridine synthase A OS=Galdi... 279 2e-72
D0NZC8_PHYIT (tr|D0NZC8) tRNA-dihydrouridine synthase OS=Phytoph... 271 2e-70
G4ZWL3_PHYSP (tr|G4ZWL3) tRNA-dihydrouridine synthase OS=Phytoph... 269 2e-69
A1SA51_SHEAM (tr|A1SA51) tRNA-dihydrouridine synthase OS=Shewane... 266 1e-68
B2T3K2_BURPP (tr|B2T3K2) tRNA-dihydrouridine synthase OS=Burkhol... 264 4e-68
F2K1D2_MARM1 (tr|F2K1D2) tRNA-dihydrouridine synthase OS=Marinom... 264 5e-68
K4KRQ4_SIMAS (tr|K4KRQ4) tRNA-dihydrouridine synthase OS=Simidui... 262 2e-67
L1IC54_GUITH (tr|L1IC54) tRNA-dihydrouridine synthase OS=Guillar... 261 2e-67
E1T673_BURSG (tr|E1T673) tRNA-dihydrouridine synthase OS=Burkhol... 260 6e-67
G8M8J0_9BURK (tr|G8M8J0) tRNA-dihydrouridine synthase OS=Burkhol... 260 6e-67
F7RRS5_9GAMM (tr|F7RRS5) tRNA-dihydrouridine synthase OS=Shewane... 260 7e-67
C5AGQ2_BURGB (tr|C5AGQ2) tRNA-dihydrouridine synthase OS=Burkhol... 259 9e-67
B0SLP0_LEPBP (tr|B0SLP0) tRNA-dihydrouridine synthase OS=Leptosp... 259 9e-67
B0SDG8_LEPBA (tr|B0SDG8) tRNA-dihydrouridine synthase OS=Leptosp... 259 9e-67
Q07XT7_SHEFN (tr|Q07XT7) tRNA-dihydrouridine synthase OS=Shewane... 259 1e-66
J3BND3_9BURK (tr|J3BND3) tRNA-dihydrouridine synthase OS=Burkhol... 259 1e-66
R9AEM5_9LEPT (tr|R9AEM5) tRNA dihydrouridine synthase A OS=Lepto... 258 2e-66
Q3J6Z4_NITOC (tr|Q3J6Z4) tRNA-dihydrouridine synthase OS=Nitroso... 258 2e-66
B6C5N2_9GAMM (tr|B6C5N2) tRNA-dihydrouridine synthase OS=Nitroso... 258 2e-66
L4K182_ECOLX (tr|L4K182) tRNA-dihydrouridine synthase OS=Escheri... 258 3e-66
E8YF68_9BURK (tr|E8YF68) tRNA-dihydrouridine synthase OS=Burkhol... 258 3e-66
D3RRS7_ALLVD (tr|D3RRS7) tRNA-dihydrouridine synthase (Precursor... 258 3e-66
I5CME8_9BURK (tr|I5CME8) tRNA-dihydrouridine synthase OS=Burkhol... 258 3e-66
D5BVC5_NITHN (tr|D5BVC5) tRNA-dihydrouridine synthase OS=Nitroso... 258 3e-66
A0YCR8_9GAMM (tr|A0YCR8) tRNA-dihydrouridine synthase OS=marine ... 258 3e-66
D5W7L2_BURSC (tr|D5W7L2) tRNA-dihydrouridine synthase OS=Burkhol... 257 4e-66
Q9RTQ8_DEIRA (tr|Q9RTQ8) tRNA-dihydrouridine synthase OS=Deinoco... 257 5e-66
C4X0W9_KLEPN (tr|C4X0W9) tRNA-dihydrouridine synthase OS=Klebsie... 257 5e-66
Q2SVN4_BURTA (tr|Q2SVN4) tRNA-dihydrouridine synthase OS=Burkhol... 257 6e-66
K2L4Q0_9PROT (tr|K2L4Q0) tRNA-dihydrouridine synthase OS=Thalass... 257 6e-66
E6T7F9_SHEB6 (tr|E6T7F9) tRNA-dihydrouridine synthase OS=Shewane... 257 6e-66
A9L1R8_SHEB9 (tr|A9L1R8) tRNA-dihydrouridine synthase OS=Shewane... 257 6e-66
M2A0R7_KLEPN (tr|M2A0R7) tRNA-dihydrouridine synthase OS=Klebsie... 257 6e-66
K4U7R6_KLEPN (tr|K4U7R6) tRNA-dihydrouridine synthase OS=Klebsie... 257 6e-66
G0GUE5_KLEPN (tr|G0GUE5) tRNA-dihydrouridine synthase OS=Klebsie... 257 6e-66
F9ZVN2_METMM (tr|F9ZVN2) tRNA-dihydrouridine synthase OS=Methylo... 257 7e-66
A1RNI1_SHESW (tr|A1RNI1) tRNA-dihydrouridine synthase OS=Shewane... 257 7e-66
G4T3K3_META2 (tr|G4T3K3) tRNA-dihydrouridine synthase OS=Methylo... 256 7e-66
A8AN75_CITK8 (tr|A8AN75) tRNA-dihydrouridine synthase OS=Citroba... 256 8e-66
C1D882_LARHH (tr|C1D882) tRNA-dihydrouridine synthase OS=Laribac... 256 8e-66
Q1IWU4_DEIGD (tr|Q1IWU4) tRNA-dihydrouridine synthase OS=Deinoco... 256 8e-66
D8KC68_NITWC (tr|D8KC68) tRNA-dihydrouridine synthase OS=Nitroso... 256 9e-66
A0KT37_SHESA (tr|A0KT37) tRNA-dihydrouridine synthase OS=Shewane... 256 9e-66
A4Y3F8_SHEPC (tr|A4Y3F8) tRNA-dihydrouridine synthase OS=Shewane... 256 9e-66
A3D8J7_SHEB5 (tr|A3D8J7) tRNA-dihydrouridine synthase OS=Shewane... 256 9e-66
G0DLX5_9GAMM (tr|G0DLX5) tRNA-dihydrouridine synthase OS=Shewane... 256 9e-66
K2JTN6_9GAMM (tr|K2JTN6) tRNA-dihydrouridine synthase OS=Gallaec... 256 1e-65
H5V753_ESCHE (tr|H5V753) tRNA-dihydrouridine synthase OS=Escheri... 256 1e-65
N3JSB8_ECOLX (tr|N3JSB8) tRNA dihydrouridine synthase A family p... 256 1e-65
E4ZBC2_NEIL0 (tr|E4ZBC2) tRNA-dihydrouridine synthase OS=Neisser... 256 1e-65
M0SG41_MUSAM (tr|M0SG41) Uncharacterized protein OS=Musa acumina... 256 1e-65
K8R9L2_9BURK (tr|K8R9L2) tRNA-dihydrouridine synthase OS=Burkhol... 256 1e-65
F0A9D2_NEIME (tr|F0A9D2) tRNA-dihydrouridine synthase OS=Neisser... 256 1e-65
B8GSM9_THISH (tr|B8GSM9) tRNA-dihydrouridine synthase OS=Thioalk... 256 1e-65
H1YVB4_9GAMM (tr|H1YVB4) tRNA-dihydrouridine synthase OS=Shewane... 256 2e-65
G0AXX9_9GAMM (tr|G0AXX9) tRNA-dihydrouridine synthase OS=Shewane... 256 2e-65
D3PTQ5_MEIRD (tr|D3PTQ5) tRNA-dihydrouridine synthase OS=Meiothe... 256 2e-65
H2ID06_9VIBR (tr|H2ID06) tRNA-dihydrouridine synthase OS=Vibrio ... 256 2e-65
E6XJJ8_SHEP2 (tr|E6XJJ8) tRNA-dihydrouridine synthase OS=Shewane... 255 2e-65
J2QZ48_KLEPN (tr|J2QZ48) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2FYM4_KLEPN (tr|J2FYM4) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1U1U3_KLEPN (tr|J1U1U3) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
G8W6A0_KLEPH (tr|G8W6A0) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
R9BKY7_KLEPN (tr|R9BKY7) tRNA dihydrouridine synthase A OS=Klebs... 255 2e-65
N9US83_KLEPN (tr|N9US83) tRNA-dihydrouridine synthase A OS=Klebs... 255 2e-65
M7QAM9_KLEPN (tr|M7QAM9) tRNA-dihydrouridine synthase A OS=Klebs... 255 2e-65
M7PAA1_KLEPN (tr|M7PAA1) tRNA-dihydrouridine synthase A OS=Klebs... 255 2e-65
M5QBD8_KLEPN (tr|M5QBD8) tRNA-dihydrouridine synthase A OS=Klebs... 255 2e-65
M5GS23_KLEPN (tr|M5GS23) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
K4SVL4_KLEPN (tr|K4SVL4) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
K4SAG4_KLEPN (tr|K4SAG4) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
K4S588_KLEPN (tr|K4S588) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2W0R3_KLEPN (tr|J2W0R3) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2UZW9_KLEPN (tr|J2UZW9) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2UIR7_KLEPN (tr|J2UIR7) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2U0I7_KLEPN (tr|J2U0I7) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2S097_KLEPN (tr|J2S097) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2QIW6_KLEPN (tr|J2QIW6) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2PLF1_KLEPN (tr|J2PLF1) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2MG66_KLEPN (tr|J2MG66) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2CGD9_KLEPN (tr|J2CGD9) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J2A2B9_KLEPN (tr|J2A2B9) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1Z951_KLEPN (tr|J1Z951) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1Z8Q2_KLEPN (tr|J1Z8Q2) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1X4F2_KLEPN (tr|J1X4F2) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1VYS7_KLEPN (tr|J1VYS7) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1VKI7_KLEPN (tr|J1VKI7) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1V1H8_KLEPN (tr|J1V1H8) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
J1TMI1_KLEPN (tr|J1TMI1) tRNA-dihydrouridine synthase OS=Klebsie... 255 2e-65
H8Z5M5_9GAMM (tr|H8Z5M5) tRNA-dihydrouridine synthase OS=Thiorho... 255 2e-65
M7Q188_KLEPN (tr|M7Q188) tRNA-dihydrouridine synthase A OS=Klebs... 255 2e-65
A7AWB5_BABBO (tr|A7AWB5) tRNA-dihydrouridine synthase OS=Babesia... 255 2e-65
Q0VPD7_ALCBS (tr|Q0VPD7) tRNA-dihydrouridine synthase OS=Alcaniv... 255 2e-65
I3Y9Y5_THIV6 (tr|I3Y9Y5) tRNA-dihydrouridine synthase OS=Thiocys... 255 2e-65
D0HBH3_VIBMI (tr|D0HBH3) tRNA-dihydrouridine synthase OS=Vibrio ... 255 2e-65
N4MPX8_ECOLX (tr|N4MPX8) tRNA dihydrouridine synthase A family p... 255 2e-65
M9HAQ9_ECOLX (tr|M9HAQ9) tRNA dihydrouridine synthase A family p... 255 2e-65
M8Q574_ECOLX (tr|M8Q574) tRNA dihydrouridine synthase A family p... 255 2e-65
M8LAQ1_ECOLX (tr|M8LAQ1) tRNA dihydrouridine synthase A family p... 255 2e-65
M8KH45_ECOLX (tr|M8KH45) tRNA dihydrouridine synthase A family p... 255 2e-65
M4JL46_ECOLX (tr|M4JL46) tRNA-dihydrouridine synthase A OS=Esche... 255 2e-65
L3PG53_ECOLX (tr|L3PG53) tRNA-dihydrouridine synthase OS=Escheri... 255 2e-65
L2X1V5_ECOLX (tr|L2X1V5) tRNA-dihydrouridine synthase OS=Escheri... 255 2e-65
J7RZA0_ECOLX (tr|J7RZA0) tRNA-dihydrouridine synthase OS=Escheri... 255 2e-65
I4P6Y7_ECOLX (tr|I4P6Y7) tRNA-dihydrouridine synthase OS=Escheri... 255 2e-65
F4T778_ECOLX (tr|F4T778) tRNA-dihydrouridine synthase OS=Escheri... 255 2e-65
L3K4N5_ECOLX (tr|L3K4N5) tRNA-dihydrouridine synthase OS=Escheri... 255 2e-65
F5RX02_9ENTR (tr|F5RX02) tRNA-dihydrouridine synthase OS=Enterob... 255 2e-65
A6WJE2_SHEB8 (tr|A6WJE2) tRNA-dihydrouridine synthase OS=Shewane... 255 2e-65
M8KXT4_ECOLX (tr|M8KXT4) tRNA dihydrouridine synthase A family p... 255 3e-65
C4B1A0_BURML (tr|C4B1A0) tRNA-dihydrouridine synthase A OS=Burkh... 255 3e-65
N4P9U3_ECOLX (tr|N4P9U3) tRNA dihydrouridine synthase A family p... 255 3e-65
B3IGP1_ECOLX (tr|B3IGP1) tRNA-dihydrouridine synthase OS=Escheri... 255 3e-65
M8W4Y3_ECOLX (tr|M8W4Y3) tRNA dihydrouridine synthase A family p... 254 3e-65
D6DPU5_ENTCL (tr|D6DPU5) tRNA-dihydrouridine synthase OS=Enterob... 254 3e-65
G6E0K2_9GAMM (tr|G6E0K2) tRNA-dihydrouridine synthase OS=Shewane... 254 3e-65
B7CTP2_BURPE (tr|B7CTP2) tRNA-dihydrouridine synthase A OS=Burkh... 254 3e-65
A1V487_BURMS (tr|A1V487) tRNA-dihydrouridine synthase A OS=Burkh... 254 4e-65
C5NK83_BURML (tr|C5NK83) tRNA-dihydrouridine synthase A OS=Burkh... 254 4e-65
Q13ZK1_BURXL (tr|Q13ZK1) tRNA-dihydrouridine synthase OS=Burkhol... 254 4e-65
C4KX83_BURPE (tr|C4KX83) tRNA-dihydrouridine synthase A OS=Burkh... 254 4e-65
Q3JSR2_BURP1 (tr|Q3JSR2) Dihydrouridine synthase OS=Burkholderia... 254 4e-65
I2IL36_9BURK (tr|I2IL36) tRNA-dihydrouridine synthase OS=Burkhol... 254 4e-65
H7EFI2_SALHO (tr|H7EFI2) tRNA-dihydrouridine synthase OS=Salmone... 254 4e-65
Q22A31_TETTS (tr|Q22A31) TIM-barrel protein, yjbN family OS=Tetr... 254 4e-65
D4ZFH6_SHEVD (tr|D4ZFH6) tRNA-dihydrouridine synthase OS=Shewane... 254 4e-65
E1P3H6_NEILA (tr|E1P3H6) tRNA-dihydrouridine synthase OS=Neisser... 254 4e-65
H5J9X2_ECOLX (tr|H5J9X2) tRNA-dihydrouridine synthase OS=Escheri... 254 4e-65
K9V4K3_9CYAN (tr|K9V4K3) tRNA-dihydrouridine synthase OS=Calothr... 254 4e-65
C5ZFJ9_BURPE (tr|C5ZFJ9) tRNA-dihydrouridine synthase A OS=Burkh... 254 5e-65
A4LQ67_BURPE (tr|A4LQ67) tRNA-dihydrouridine synthase OS=Burkhol... 254 5e-65
F8VMJ2_SALBC (tr|F8VMJ2) tRNA-dihydrouridine synthase OS=Salmone... 254 6e-65
Q0SXR6_SHIF8 (tr|Q0SXR6) tRNA-dihydrouridine synthase OS=Shigell... 254 6e-65
D2ADF9_SHIF2 (tr|D2ADF9) tRNA-dihydrouridine synthase OS=Shigell... 254 6e-65
I0VJR2_SHIFL (tr|I0VJR2) tRNA-dihydrouridine synthase OS=Shigell... 254 6e-65
F5N826_SHIFL (tr|F5N826) tRNA-dihydrouridine synthase OS=Shigell... 254 6e-65
F4V980_ECOLX (tr|F4V980) tRNA-dihydrouridine synthase OS=Escheri... 254 6e-65
B8KHI9_9GAMM (tr|B8KHI9) tRNA-dihydrouridine synthase OS=gamma p... 254 6e-65
F4VPB9_ECOLX (tr|F4VPB9) tRNA-dihydrouridine synthase OS=Escheri... 254 6e-65
M9A6X2_ECOLX (tr|M9A6X2) tRNA dihydrouridine synthase A family p... 253 6e-65
J2YW27_SHIFL (tr|J2YW27) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
I6GCN6_SHIFL (tr|I6GCN6) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
I6CSF3_SHIFL (tr|I6CSF3) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
I6BFI6_SHIFL (tr|I6BFI6) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
I6BCU1_SHIFL (tr|I6BCU1) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F7RGW0_SHIFL (tr|F7RGW0) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5R3Y6_SHIFL (tr|F5R3Y6) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5QPS0_SHIFL (tr|F5QPS0) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5QB61_SHIFL (tr|F5QB61) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5PWS3_SHIFL (tr|F5PWS3) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5PH02_SHIFL (tr|F5PH02) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5P0P3_SHIFL (tr|F5P0P3) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5NM09_SHIFL (tr|F5NM09) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
F5MSX4_SHIFL (tr|F5MSX4) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
E3Y4D3_SHIFL (tr|E3Y4D3) tRNA-dihydrouridine synthase OS=Shigell... 253 6e-65
Q62K63_BURMA (tr|Q62K63) tRNA-dihydrouridine synthase OS=Burkhol... 253 6e-65
A3MJB7_BURM7 (tr|A3MJB7) tRNA-dihydrouridine synthase OS=Burkhol... 253 6e-65
A2S354_BURM9 (tr|A2S354) tRNA-dihydrouridine synthase OS=Burkhol... 253 6e-65
A5XPN4_BURML (tr|A5XPN4) tRNA-dihydrouridine synthase OS=Burkhol... 253 6e-65
A5XG28_BURML (tr|A5XG28) tRNA-dihydrouridine synthase OS=Burkhol... 253 6e-65
A5TLF2_BURML (tr|A5TLF2) tRNA-dihydrouridine synthase OS=Burkhol... 253 6e-65
D3RG56_KLEVT (tr|D3RG56) tRNA-dihydrouridine synthase OS=Klebsie... 253 7e-65
L9GL24_ECOLX (tr|L9GL24) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L9G2X5_ECOLX (tr|L9G2X5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L9FDH6_ECOLX (tr|L9FDH6) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L9EWF5_ECOLX (tr|L9EWF5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L9E8P5_ECOLX (tr|L9E8P5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L9DJ53_ECOLX (tr|L9DJ53) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L9CEN6_ECOLX (tr|L9CEN6) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L8ZX42_ECOLX (tr|L8ZX42) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L8ZAS6_ECOLX (tr|L8ZAS6) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L8YI40_ECOLX (tr|L8YI40) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L8YH43_ECOLX (tr|L8YH43) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L1FVL4_ECOLX (tr|L1FVL4) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L1FCM1_ECOLX (tr|L1FCM1) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L1DUN9_ECOLX (tr|L1DUN9) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L1D6R7_ECOLX (tr|L1D6R7) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L1BAF8_ECOLX (tr|L1BAF8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L0YYI5_ECOLX (tr|L0YYI5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L0YEG8_ECOLX (tr|L0YEG8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
L0XIK2_ECOLX (tr|L0XIK2) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K5I2K0_ECOLX (tr|K5I2K0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K5HM90_ECOLX (tr|K5HM90) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K5HA54_ECOLX (tr|K5HA54) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K5DX79_ECOLX (tr|K5DX79) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3SL17_ECOLX (tr|K3SL17) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3RAQ5_ECOLX (tr|K3RAQ5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3RAM7_ECOLX (tr|K3RAM7) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3R955_ECOLX (tr|K3R955) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3Q408_ECOLX (tr|K3Q408) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3LAC9_ECOLX (tr|K3LAC9) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3L3W1_ECOLX (tr|K3L3W1) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3J7R3_ECOLX (tr|K3J7R3) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3GR40_ECOLX (tr|K3GR40) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3G6V8_ECOLX (tr|K3G6V8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3F870_ECOLX (tr|K3F870) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3DHA0_ECOLX (tr|K3DHA0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3CIW7_ECOLX (tr|K3CIW7) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K3B8V5_ECOLX (tr|K3B8V5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K2ZPH5_ECOLX (tr|K2ZPH5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K2XX02_ECOLX (tr|K2XX02) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
K2XTV8_ECOLX (tr|K2XTV8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5Z8Q6_ECOLX (tr|I5Z8Q6) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5YH49_ECOLX (tr|I5YH49) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5XWK9_ECOLX (tr|I5XWK9) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5XA49_ECOLX (tr|I5XA49) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5WK40_ECOLX (tr|I5WK40) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5TRK3_ECOLX (tr|I5TRK3) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5TKS3_ECOLX (tr|I5TKS3) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5S7L0_ECOLX (tr|I5S7L0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5QW20_ECOLX (tr|I5QW20) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5QIC5_ECOLX (tr|I5QIC5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5QAP2_ECOLX (tr|I5QAP2) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5PZ17_ECOLX (tr|I5PZ17) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5PCI4_ECOLX (tr|I5PCI4) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5MKS6_ECOLX (tr|I5MKS6) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5M822_ECOLX (tr|I5M822) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5M3M9_ECOLX (tr|I5M3M9) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5JSB5_ECOLX (tr|I5JSB5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5IS12_ECOLX (tr|I5IS12) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5HBA3_ECOLX (tr|I5HBA3) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5GHD0_ECOLX (tr|I5GHD0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5EVR0_ECOLX (tr|I5EVR0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5EN81_ECOLX (tr|I5EN81) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5DBT8_ECOLX (tr|I5DBT8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I5D8L2_ECOLX (tr|I5D8L2) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H4RNC9_ECOLX (tr|H4RNC9) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H4R7Z4_ECOLX (tr|H4R7Z4) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H4QSD8_ECOLX (tr|H4QSD8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H4PSR8_ECOLX (tr|H4PSR8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H4NWN1_ECOLX (tr|H4NWN1) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
F1Y6L6_ECO57 (tr|F1Y6L6) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
E7TQ37_ECO57 (tr|E7TQ37) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
B3BTQ1_ECO57 (tr|B3BTQ1) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
B3BC26_ECO57 (tr|B3BC26) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
J7GAP8_ENTCL (tr|J7GAP8) tRNA-dihydrouridine synthase OS=Enterob... 253 7e-65
B2JKA0_BURP8 (tr|B2JKA0) tRNA-dihydrouridine synthase OS=Burkhol... 253 7e-65
E8J966_ECO57 (tr|E8J966) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
E8HP28_ECOLX (tr|E8HP28) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
B7NSL0_ECO7I (tr|B7NSL0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
G4PNP5_ECOLX (tr|G4PNP5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
N3QTZ4_ECOLX (tr|N3QTZ4) tRNA dihydrouridine synthase A family p... 253 7e-65
N2D1R7_ECOLX (tr|N2D1R7) tRNA dihydrouridine synthase A family p... 253 7e-65
L3R4I2_ECOLX (tr|L3R4I2) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
J2DR95_ECOLX (tr|J2DR95) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I4JF38_ECOLX (tr|I4JF38) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I2Z0Z5_ECOLX (tr|I2Z0Z5) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
I2VDQ3_ECOLX (tr|I2VDQ3) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H5NHS0_ECOLX (tr|H5NHS0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H5JRK0_ECOLX (tr|H5JRK0) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
H5ISB8_ECOLX (tr|H5ISB8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
G2BXJ8_ECOLX (tr|G2BXJ8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
G2A7G2_ECOLX (tr|G2A7G2) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
F4NK45_9ENTR (tr|F4NK45) tRNA-dihydrouridine synthase OS=Shigell... 253 7e-65
E9TRN9_ECOLX (tr|E9TRN9) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
E7IED8_ECOLX (tr|E7IED8) tRNA-dihydrouridine synthase OS=Escheri... 253 7e-65
C8ULQ3_ECO1A (tr|C8ULQ3) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
M5HLR3_ECOLX (tr|M5HLR3) tRNA-dihydrouridine synthase A OS=Esche... 253 8e-65
K4VU44_ECOLX (tr|K4VU44) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
K4UV29_ECOLX (tr|K4UV29) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
I4QU95_ECOLX (tr|I4QU95) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
I4Q8X4_ECOLX (tr|I4Q8X4) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
I2V797_ECOLX (tr|I2V797) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
I2UDJ0_ECOLX (tr|I2UDJ0) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
H5B2V3_ECOLX (tr|H5B2V3) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
H4ZME2_ECOLX (tr|H4ZME2) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
H4Z4F5_ECOLX (tr|H4Z4F5) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
G1ZD06_ECOLX (tr|G1ZD06) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
E7IWQ1_ECOLX (tr|E7IWQ1) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
B1HIP3_BURPE (tr|B1HIP3) tRNA-dihydrouridine synthase OS=Burkhol... 253 8e-65
C6U122_BURPE (tr|C6U122) tRNA-dihydrouridine synthase OS=Burkhol... 253 8e-65
L4IFZ1_ECOLX (tr|L4IFZ1) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
B3Y1I5_ECO11 (tr|B3Y1I5) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
B3WIX8_ECOLX (tr|B3WIX8) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
Q39GW1_BURS3 (tr|Q39GW1) tRNA-dihydrouridine synthase OS=Burkhol... 253 8e-65
K3GXS1_ECOLX (tr|K3GXS1) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
H4TWC4_ECOLX (tr|H4TWC4) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
H4PD89_ECOLX (tr|H4PD89) tRNA-dihydrouridine synthase OS=Escheri... 253 8e-65
L3UUM8_ECOLX (tr|L3UUM8) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L3I382_ECOLX (tr|L3I382) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L2VE12_ECOLX (tr|L2VE12) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
N2NUI7_ECOLX (tr|N2NUI7) tRNA dihydrouridine synthase A family p... 253 9e-65
M9J5J5_ECOLX (tr|M9J5J5) tRNA dihydrouridine synthase A family p... 253 9e-65
L4EPH3_ECOLX (tr|L4EPH3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L4EH27_ECOLX (tr|L4EH27) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
K0BG76_ECO1E (tr|K0BG76) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
K0ATH1_ECO1C (tr|K0ATH1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
J9ZT05_ECO14 (tr|J9ZT05) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H9Y931_ECOLW (tr|H9Y931) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B6I5R5_ECOSE (tr|B6I5R5) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B1LPL3_ECOSM (tr|B1LPL3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
A8A7F0_ECOHS (tr|A8A7F0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
A7ZUS0_ECO24 (tr|A7ZUS0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L1R512_ECOLX (tr|L1R512) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L1ECY4_ECOLX (tr|L1ECY4) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L1CMN0_ECOLX (tr|L1CMN0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L0ZYZ5_ECOLX (tr|L0ZYZ5) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L0YRJ0_ECOLX (tr|L0YRJ0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L0X6U9_ECOLX (tr|L0X6U9) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
K3U6R0_ECOLX (tr|K3U6R0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
K3AWD4_ECOLX (tr|K3AWD4) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
J2F2R9_SHISO (tr|J2F2R9) tRNA-dihydrouridine synthase OS=Shigell... 253 9e-65
I5MTY7_ECOLX (tr|I5MTY7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I5L1P1_ECOLX (tr|I5L1P1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I4UKR9_ECOLX (tr|I4UKR9) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I4U7P9_ECOLX (tr|I4U7P9) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I4TN61_ECOLX (tr|I4TN61) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I4TK67_ECOLX (tr|I4TK67) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I4SFQ2_ECOLX (tr|I4SFQ2) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I4S8E3_ECOLX (tr|I4S8E3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I2ZKC7_ECOLX (tr|I2ZKC7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I2YEQ7_ECOLX (tr|I2YEQ7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I2TH30_ECOLX (tr|I2TH30) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I2T3F7_ECOLX (tr|I2T3F7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I2SRV5_ECOLX (tr|I2SRV5) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
I2I0K8_ECOLX (tr|I2I0K8) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H9YBU4_ECOKO (tr|H9YBU4) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H6MIZ7_ECOLX (tr|H6MIZ7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H5PT23_ECOLX (tr|H5PT23) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H5L1V8_ECOLX (tr|H5L1V8) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4Y9K7_ECOLX (tr|H4Y9K7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4XTU1_ECOLX (tr|H4XTU1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4WZF2_ECOLX (tr|H4WZF2) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4WJJ4_ECOLX (tr|H4WJJ4) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4W4G6_ECOLX (tr|H4W4G6) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4US88_ECOLX (tr|H4US88) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4UCI0_ECOLX (tr|H4UCI0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4T0P7_ECOLX (tr|H4T0P7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4MZS3_ECOLX (tr|H4MZS3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
H4M181_ECOLX (tr|H4M181) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
G2F674_ECOLX (tr|G2F674) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
G2D745_ECOLX (tr|G2D745) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
G2CSV0_ECOLX (tr|G2CSV0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
G2BGX9_ECOLX (tr|G2BGX9) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
G1YK01_ECOLX (tr|G1YK01) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
G0F300_ECOLX (tr|G0F300) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
F9QYU7_ECOLX (tr|F9QYU7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
F9I327_ECOLX (tr|F9I327) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
F9CPN6_ECOLX (tr|F9CPN6) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
F8YNJ1_ECOLX (tr|F8YNJ1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
F1XKS3_ECO57 (tr|F1XKS3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E9WY51_ECOLX (tr|E9WY51) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E9W183_ECOLX (tr|E9W183) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E8IUW3_ECOLX (tr|E8IUW3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E8IGR1_ECOLX (tr|E8IGR1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E7UIF3_ECOLX (tr|E7UIF3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
D8BRZ2_ECOLX (tr|D8BRZ2) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B6ZVH5_ECO57 (tr|B6ZVH5) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B3HEM1_ECOLX (tr|B3HEM1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B3AZZ1_ECO57 (tr|B3AZZ1) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E7HDE4_ECOLX (tr|E7HDE4) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
N2K915_ECOLX (tr|N2K915) tRNA dihydrouridine synthase A family p... 253 9e-65
E8H9X0_ECO57 (tr|E8H9X0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
L3PV05_ECOLX (tr|L3PV05) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
Q3YUT5_SHISS (tr|Q3YUT5) tRNA-dihydrouridine synthase OS=Shigell... 253 9e-65
E8Y5H4_ECOKO (tr|E8Y5H4) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
E0J0E5_ECOLW (tr|E0J0E5) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
D3QK55_ECOCB (tr|D3QK55) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
D2TRT8_CITRI (tr|D2TRT8) tRNA-dihydrouridine synthase OS=Citroba... 253 9e-65
C9QUF0_ECOD1 (tr|C9QUF0) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
C8TZX5_ECO10 (tr|C8TZX5) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
C6UJS3_ECOBR (tr|C6UJS3) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B7NFZ2_ECOLU (tr|B7NFZ2) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B7M7W2_ECO8A (tr|B7M7W2) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B7LAZ7_ECO55 (tr|B7LAZ7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
B1XCT7_ECODH (tr|B1XCT7) tRNA-dihydrouridine synthase OS=Escheri... 253 9e-65
N4T2F4_ECOLX (tr|N4T2F4) tRNA dihydrouridine synthase A family p... 253 9e-65
N4SCA4_ECOLX (tr|N4SCA4) tRNA dihydrouridine synthase A family p... 253 9e-65
N4RJ32_ECOLX (tr|N4RJ32) tRNA dihydrouridine synthase A family p... 253 9e-65
N4R4A6_ECOLX (tr|N4R4A6) tRNA dihydrouridine synthase A family p... 253 9e-65
N4LL87_ECOLX (tr|N4LL87) tRNA dihydrouridine synthase A family p... 253 9e-65
N4KTF4_ECOLX (tr|N4KTF4) tRNA dihydrouridine synthase A family p... 253 9e-65
N4KBJ7_ECOLX (tr|N4KBJ7) tRNA dihydrouridine synthase A family p... 253 9e-65
N4JXG0_ECOLX (tr|N4JXG0) tRNA dihydrouridine synthase A family p... 253 9e-65
N4JE86_ECOLX (tr|N4JE86) tRNA dihydrouridine synthase A family p... 253 9e-65
N4IX15_ECOLX (tr|N4IX15) tRNA dihydrouridine synthase A family p... 253 9e-65
N4INW7_ECOLX (tr|N4INW7) tRNA dihydrouridine synthase A family p... 253 9e-65
N4HR84_ECOLX (tr|N4HR84) tRNA dihydrouridine synthase A family p... 253 9e-65
N4CK45_ECOLX (tr|N4CK45) tRNA dihydrouridine synthase A family p... 253 9e-65
N4C0X2_ECOLX (tr|N4C0X2) tRNA dihydrouridine synthase A family p... 253 9e-65
N4BC30_ECOLX (tr|N4BC30) tRNA dihydrouridine synthase A family p... 253 9e-65
N4B1J4_ECOLX (tr|N4B1J4) tRNA dihydrouridine synthase A family p... 253 9e-65
N4B0A8_ECOLX (tr|N4B0A8) tRNA dihydrouridine synthase A family p... 253 9e-65
N4A591_ECOLX (tr|N4A591) tRNA dihydrouridine synthase A family p... 253 9e-65
N3ZJW9_ECOLX (tr|N3ZJW9) tRNA dihydrouridine synthase A family p... 253 9e-65
N3XZD6_ECOLX (tr|N3XZD6) tRNA dihydrouridine synthase A family p... 253 9e-65
N3XXS8_ECOLX (tr|N3XXS8) tRNA dihydrouridine synthase A family p... 253 9e-65
N3X1N8_ECOLX (tr|N3X1N8) tRNA dihydrouridine synthase A family p... 253 9e-65
N3WUU8_ECOLX (tr|N3WUU8) tRNA dihydrouridine synthase A family p... 253 9e-65
N3VK28_ECOLX (tr|N3VK28) tRNA dihydrouridine synthase A family p... 253 9e-65
N3UU33_ECOLX (tr|N3UU33) tRNA dihydrouridine synthase A family p... 253 9e-65
N3T9Q1_ECOLX (tr|N3T9Q1) tRNA dihydrouridine synthase A family p... 253 9e-65
N3SE33_ECOLX (tr|N3SE33) tRNA dihydrouridine synthase A family p... 253 9e-65
N3RZ22_ECOLX (tr|N3RZ22) tRNA dihydrouridine synthase A family p... 253 9e-65
N3RV48_ECOLX (tr|N3RV48) tRNA dihydrouridine synthase A family p... 253 9e-65
N3QGI1_ECOLX (tr|N3QGI1) tRNA dihydrouridine synthase A family p... 253 9e-65
N3PVU0_ECOLX (tr|N3PVU0) tRNA dihydrouridine synthase A family p... 253 9e-65
N3NUX2_ECOLX (tr|N3NUX2) tRNA dihydrouridine synthase A family p... 253 9e-65
N3MM77_ECOLX (tr|N3MM77) tRNA dihydrouridine synthase A family p... 253 9e-65
N3LXX8_ECOLX (tr|N3LXX8) tRNA dihydrouridine synthase A family p... 253 9e-65
N3LHZ9_ECOLX (tr|N3LHZ9) tRNA dihydrouridine synthase A family p... 253 9e-65
N3JAD3_ECOLX (tr|N3JAD3) tRNA dihydrouridine synthase A family p... 253 9e-65
N3IXQ9_ECOLX (tr|N3IXQ9) tRNA dihydrouridine synthase A family p... 253 9e-65
N3HTK3_ECOLX (tr|N3HTK3) tRNA dihydrouridine synthase A family p... 253 9e-65
N3GWY7_ECOLX (tr|N3GWY7) tRNA dihydrouridine synthase A family p... 253 9e-65
N3FMY5_ECOLX (tr|N3FMY5) tRNA dihydrouridine synthase A family p... 253 9e-65
N3DTX2_ECOLX (tr|N3DTX2) tRNA dihydrouridine synthase A family p... 253 9e-65
N3DGK2_ECOLX (tr|N3DGK2) tRNA dihydrouridine synthase A family p... 253 9e-65
N3DAT3_ECOLX (tr|N3DAT3) tRNA dihydrouridine synthase A family p... 253 9e-65
N3C967_ECOLX (tr|N3C967) tRNA dihydrouridine synthase A family p... 253 9e-65
N3BZ86_ECOLX (tr|N3BZ86) tRNA dihydrouridine synthase A family p... 253 9e-65
N3BTM2_ECOLX (tr|N3BTM2) tRNA dihydrouridine synthase A family p... 253 9e-65
N3BAX1_ECOLX (tr|N3BAX1) tRNA dihydrouridine synthase A family p... 253 9e-65
N2ZNN8_ECOLX (tr|N2ZNN8) tRNA dihydrouridine synthase A family p... 253 9e-65
N2YWU3_ECOLX (tr|N2YWU3) tRNA dihydrouridine synthase A family p... 253 9e-65
N2Y970_ECOLX (tr|N2Y970) tRNA dihydrouridine synthase A family p... 253 9e-65
N2XAS4_ECOLX (tr|N2XAS4) tRNA dihydrouridine synthase A family p... 253 9e-65
N2SCU4_ECOLX (tr|N2SCU4) tRNA dihydrouridine synthase A family p... 253 9e-65
N2R528_ECOLX (tr|N2R528) tRNA dihydrouridine synthase A family p... 253 9e-65
N2PZD8_ECOLX (tr|N2PZD8) tRNA dihydrouridine synthase A family p... 253 9e-65
N2NNK8_ECOLX (tr|N2NNK8) tRNA dihydrouridine synthase A family p... 253 9e-65
N2LRP9_ECOLX (tr|N2LRP9) tRNA dihydrouridine synthase A family p... 253 9e-65
N2LCT0_ECOLX (tr|N2LCT0) tRNA dihydrouridine synthase A family p... 253 9e-65
N2KH48_ECOLX (tr|N2KH48) tRNA dihydrouridine synthase A family p... 253 9e-65
N2FP38_ECOLX (tr|N2FP38) tRNA dihydrouridine synthase A family p... 253 9e-65
N2F449_ECOLX (tr|N2F449) tRNA dihydrouridine synthase A family p... 253 9e-65
N2EG91_ECOLX (tr|N2EG91) tRNA dihydrouridine synthase A family p... 253 9e-65
N2E7J0_ECOLX (tr|N2E7J0) tRNA dihydrouridine synthase A family p... 253 9e-65
N2D904_ECOLX (tr|N2D904) tRNA dihydrouridine synthase A family p... 253 9e-65
>I3SNH2_LOTJA (tr|I3SNH2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
Length = 425
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/400 (96%), Positives = 386/400 (96%)
Query: 1 MMKFSGYSLAVSFSPVGSTVIRNNCRFHVGXXXXXXXXXXXAKQQSHDKGVLPNYYLPPW 60
MMKFSGYSLAVSFSPVGSTVIRNNCRFHVG AKQQSHDKGVLPNYYLPPW
Sbjct: 1 MMKFSGYSLAVSFSPVGSTVIRNNCRFHVGRNFRSSSRFFSAKQQSHDKGVLPNYYLPPW 60
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ
Sbjct: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAI
Sbjct: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIT 180
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI
Sbjct: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGV VGRAAYNNPWHILGHV
Sbjct: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVTVGRAAYNNPWHILGHV 300
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG RPTVRDIVKPLLNLFHSAPGNGLWKR
Sbjct: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGRRPTVRDIVKPLLNLFHSAPGNGLWKR 360
Query: 361 KADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
KADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR
Sbjct: 361 KADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
>I1KRM3_SOYBN (tr|I1KRM3) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 430
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/405 (83%), Positives = 366/405 (90%), Gaps = 6/405 (1%)
Query: 1 MMKFSGYSLAVSFSPVGSTVIRNNCRFHVGXX-----XXXXXXXXXAKQQSHDK-GVLPN 54
MMK +GYSLAVSF+P+ S V+++N RF VG K Q H+K GV+
Sbjct: 1 MMKLAGYSLAVSFAPISSNVVKSNKRFTVGISHRNRCSYRLFSTHAQKHQLHEKPGVVAR 60
Query: 55 YYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQ 114
Y+LPPWFSVAPMM+WTDHHYRTLARLISKHAWLYTEMLAAETIV+Q+DNLDRFLA+SPDQ
Sbjct: 61 YHLPPWFSVAPMMDWTDHHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPDQ 120
Query: 115 HPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAE 174
HPIVLQIGGSN+E LAKATELANAY YDEINLNCGCPSPKVAGHGCFGVSLML+PKFVAE
Sbjct: 121 HPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAE 180
Query: 175 AMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISP 234
AMSAIAA+TNVPVSVKCRIGVDDHDSY+ELCDFI++VSSLSPTKHFIIHSRKALLNGISP
Sbjct: 181 AMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISP 240
Query: 235 AENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPW 294
AENRSIPPLKYEYFYGLLRDFPDL FTINGGITSVDEV AAREAGA+GVMVGRAAYNNPW
Sbjct: 241 AENRSIPPLKYEYFYGLLRDFPDLRFTINGGITSVDEVSAAREAGAHGVMVGRAAYNNPW 300
Query: 295 HILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPG 354
ILGHVD IYG PSC LTRRQVLE+Y+VYGDSVLGKYGHRPT+RDIVKPLL+LFHS PG
Sbjct: 301 QILGHVDAAIYGTPSCDLTRRQVLERYLVYGDSVLGKYGHRPTLRDIVKPLLHLFHSEPG 360
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGR 399
NGLWKRKADAAF++CTT++SFFEETLVAIPDSVLDSPV EP PGR
Sbjct: 361 NGLWKRKADAAFKNCTTMESFFEETLVAIPDSVLDSPVAEPPPGR 405
>B7FNH4_MEDTR (tr|B7FNH4) Putative uncharacterized protein OS=Medicago truncatula
PE=2 SV=1
Length = 432
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/407 (83%), Positives = 359/407 (88%), Gaps = 9/407 (2%)
Query: 2 MKFSGYSLAVSFSPVGSTVI-RNNC--RFHVGXXXXXXXXXXXA-----KQQS-HDKGVL 52
MKFSGYS++VSFSP+ S I RN+C R V + KQQS H GVL
Sbjct: 1 MKFSGYSISVSFSPLSSNFITRNSCSRRLPVSFSRRSRRNLCSSRVFSVKQQSYHKHGVL 60
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP 112
YLPPWFSVAPMM+WTD+HYRTLARLISKHAWLYTEMLAAETIV+Q+DNLDRFLA+SP
Sbjct: 61 GKQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSP 120
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
+QHPIVLQIGGSN+E LAKATELANAY YDEINLNCGCPSP+VAGHG FGVSLMLDPKFV
Sbjct: 121 EQHPIVLQIGGSNIESLAKATELANAYCYDEINLNCGCPSPRVAGHGSFGVSLMLDPKFV 180
Query: 173 AEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGI 232
AEAMSAIAANTNVPVSVKCRIGVDD DSYDELC+F+ VSSLSPTKHFIIHSRKALLNGI
Sbjct: 181 AEAMSAIAANTNVPVSVKCRIGVDDRDSYDELCEFVSTVSSLSPTKHFIIHSRKALLNGI 240
Query: 233 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEV AAR+AGA+GVM+GRAA+ N
Sbjct: 241 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVNAARDAGAHGVMIGRAAFYN 300
Query: 293 PWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSA 352
PWHILGHVDT IYGAPSC LTRRQVLEKYIVYGDS LGKYGHRPTVRDIVKPLLNLFHSA
Sbjct: 301 PWHILGHVDTAIYGAPSCGLTRRQVLEKYIVYGDSELGKYGHRPTVRDIVKPLLNLFHSA 360
Query: 353 PGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGR 399
PGNG WKR ADAAFR+CTTIKSFFEET+ AIPDSVLDSPV EP GR
Sbjct: 361 PGNGQWKRNADAAFRNCTTIKSFFEETIDAIPDSVLDSPVSEPPLGR 407
>K7LI80_SOYBN (tr|K7LI80) tRNA-dihydrouridine synthase OS=Glycine max PE=3 SV=1
Length = 372
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 291/349 (83%), Positives = 317/349 (90%)
Query: 51 VLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAF 110
++ ++Y PP FSVAPMM+WTDHHYRTLARLISKHAWLYTEMLAAETIVYQ+ NLDRFLA+
Sbjct: 1 MVADHYSPPLFSVAPMMDWTDHHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAY 60
Query: 111 SPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPK 170
SPDQHPIVLQIGGSN++ LAKATELANAY YDEIN NCGCPSP+VAG GCFGV LMLDPK
Sbjct: 61 SPDQHPIVLQIGGSNLDNLAKATELANAYCYDEINFNCGCPSPRVAGRGCFGVRLMLDPK 120
Query: 171 FVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLN 230
FVAEA+S IAANTNVPV+VKCRIGVDDHDSY+ELCDFI+KVSSLSP KHF+IHSRKALL
Sbjct: 121 FVAEAISLIAANTNVPVTVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFVIHSRKALLK 180
Query: 231 GISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAY 290
G+SPAENRSIPPLKYEYFYGLLRDFPDL+FTINGGI S+DEV A +AGA+GVMVGRAAY
Sbjct: 181 GLSPAENRSIPPLKYEYFYGLLRDFPDLSFTINGGIASIDEVNGALKAGAHGVMVGRAAY 240
Query: 291 NNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFH 350
NNPWHILGHVDT IYGA S LTRRQVLEKY VYGDSVL +YG P++RDIVKPLL FH
Sbjct: 241 NNPWHILGHVDTAIYGASSSGLTRRQVLEKYQVYGDSVLQRYGLGPSLRDIVKPLLGFFH 300
Query: 351 SAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGR 399
S PGNGLWKRKAD+A + CTTIKSFFEETLVAIPDSVLDS VV+P GR
Sbjct: 301 SEPGNGLWKRKADSAVQTCTTIKSFFEETLVAIPDSVLDSAVVKPQSGR 349
>M5X077_PRUPE (tr|M5X077) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa007116mg PE=4 SV=1
Length = 381
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/344 (82%), Positives = 312/344 (90%)
Query: 55 YYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQ 114
+Y PPWFSVAPMMEWTD+HYRTLARLISK+AWLYTEMLAAETIVYQ+DNLDRFL +SP+Q
Sbjct: 12 HYPPPWFSVAPMMEWTDNHYRTLARLISKNAWLYTEMLAAETIVYQKDNLDRFLEYSPEQ 71
Query: 115 HPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAE 174
HPIVLQIGG+N+E LAKATELA Y YDEIN NCGCPSP+VAGHGCFG LMLDPKFVAE
Sbjct: 72 HPIVLQIGGNNLENLAKATELAEPYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAE 131
Query: 175 AMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISP 234
AMS IAA+T+ PVSVKCRIGVDDHDSY+ELCDFI+KVSS SPT+HFIIHSRKALLNGISP
Sbjct: 132 AMSVIAAHTDAPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISP 191
Query: 235 AENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPW 294
AENRSIPPLKYEYFYGLLRDFPDL FTINGGI +VDEV AAR AGA+GVMVGRAA+ PW
Sbjct: 192 AENRSIPPLKYEYFYGLLRDFPDLRFTINGGINTVDEVNAARRAGAHGVMVGRAAFQKPW 251
Query: 295 HILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPG 354
H LGHVDT IYGAPS +TRRQ+LEK+ VYGDS +GKYG +PTVRD+ +PLL LFHS PG
Sbjct: 252 HTLGHVDTAIYGAPSSGVTRRQILEKFQVYGDSAVGKYGRKPTVRDVARPLLGLFHSEPG 311
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPG 398
NG+WKRKADAAF HCTT+KSFFEETLVAIPD VLDSP+ EP+ G
Sbjct: 312 NGVWKRKADAAFLHCTTMKSFFEETLVAIPDHVLDSPIGEPSSG 355
>K7KQ17_SOYBN (tr|K7KQ17) tRNA-dihydrouridine synthase (Fragment) OS=Glycine max
PE=3 SV=1
Length = 359
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 292/358 (81%), Positives = 312/358 (87%), Gaps = 25/358 (6%)
Query: 43 KQQSHDK-GVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQ 101
KQQ +K GV+ YYLPPWFSVAPMM+WTDHHYRTL RLISKHAWLYTEMLAAETIV+Q+
Sbjct: 1 KQQLQEKPGVVARYYLPPWFSVAPMMDWTDHHYRTLVRLISKHAWLYTEMLAAETIVHQK 60
Query: 102 DNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCF 161
DNLDRFLA+SPDQHPIVLQIGGSN+E LAKATELAN Y YDEINLNCGCPSPKVAGHGCF
Sbjct: 61 DNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANVYCYDEINLNCGCPSPKVAGHGCF 120
Query: 162 GVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFI 221
GVSLML+PKFVAEAMSAIAA+TNVPVSVKCRIGVDDHDSY+ELCDFI++VSSLSPTKHFI
Sbjct: 121 GVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFI 180
Query: 222 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY 281
IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDL FTINGGI+ VDE
Sbjct: 181 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLRFTINGGISRVDE---------- 230
Query: 282 GVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDI 341
ILGHVD IY PSC LTRRQVLEKY+VYGDSVLGKYGHR T+RD+
Sbjct: 231 --------------ILGHVDAAIYDKPSCDLTRRQVLEKYLVYGDSVLGKYGHRSTLRDV 276
Query: 342 VKPLLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGR 399
VKPLL+LFHS PGNGLWKRKADAAF++CTTI+SFFEETLVAIPDSVLDS V E PGR
Sbjct: 277 VKPLLHLFHSEPGNGLWKRKADAAFKNCTTIESFFEETLVAIPDSVLDSLVAESPPGR 334
>B9RVP7_RICCO (tr|B9RVP7) tRNA-dihydrouridine synthase OS=Ricinus communis
GN=RCOM_0968080 PE=3 SV=1
Length = 375
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/346 (81%), Positives = 308/346 (89%), Gaps = 1/346 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FSVAPMM+WTDHHYRTLARLISKH+WLYTEMLAAETIVYQQ NLDRFLAFSP QH
Sbjct: 6 YHPPLFSVAPMMDWTDHHYRTLARLISKHSWLYTEMLAAETIVYQQGNLDRFLAFSPQQH 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELA AYGYDEIN NCGCPSP+VAGHGCFGV LMLDPKFV EA
Sbjct: 66 PIVLQIGGSNLDNLAKATELATAYGYDEINFNCGCPSPRVAGHGCFGVRLMLDPKFVGEA 125
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAANT+VPVSVKCRIGVD+HDSY+ELCDFI+KVSSLSPTKHFIIHSRKALLNGISPA
Sbjct: 126 MSVIAANTDVPVSVKCRIGVDNHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPA 185
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR IPPLKYEY++ LLRDFPDL FTINGGI +DEV A GA+GVMVGRAA+NNPW
Sbjct: 186 ENRKIPPLKYEYYFALLRDFPDLRFTINGGINCIDEVNLALREGAHGVMVGRAAFNNPWT 245
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPG 354
+LGHVD+ IYGAP LTRRQVLE+Y Y D++LG YG +RP VRD+VKPLL LF+S PG
Sbjct: 246 VLGHVDSAIYGAPESGLTRRQVLEQYQAYADAILGTYGNNRPNVRDVVKPLLGLFYSEPG 305
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
NGLWKR+ADAAF+ CTTIKSFFEETLVAIPD+VLDSP+ E GR+
Sbjct: 306 NGLWKRRADAAFQSCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQ 351
>M1A906_SOLTU (tr|M1A906) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400006795 PE=4 SV=1
Length = 427
Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/398 (71%), Positives = 320/398 (80%), Gaps = 6/398 (1%)
Query: 2 MKFSGYSLAVSFSPVGSTVIR----NNCRFHVGXXXXXXXXXXXAKQQSHDKGVLP-NYY 56
MK +G+ L S +P S VIR ++ F+ + H ++ Y
Sbjct: 1 MKSAGHCLIASITPFHS-VIRFGRFSSNLFYGSSSKPRTLCAYHQNSKLHSASLMAAERY 59
Query: 57 LPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHP 116
PPWFSVAPMM+WTD+HYRTLARLISK AWLYTEM+AAETIVYQ NLDRFLA+ P+QHP
Sbjct: 60 PPPWFSVAPMMDWTDNHYRTLARLISKKAWLYTEMIAAETIVYQTGNLDRFLAYGPEQHP 119
Query: 117 IVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAM 176
IVLQIGG+ +E LAKAT+LA YGYDEINLNCGCPSPKVAGHGCFGV LMLDPKFVAEAM
Sbjct: 120 IVLQIGGNKLENLAKATQLATPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAM 179
Query: 177 SAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAE 236
S IAANTNVPVSVKCRIGVDDHDSY+ELCDFI++VSS SPT+HFIIHSRKALLNGISPA+
Sbjct: 180 SVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYEVSSQSPTRHFIIHSRKALLNGISPAD 239
Query: 237 NRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHI 296
NR IPPLKYEY+Y LLRDFPDL FTINGGITS++EV AA GA+GVMVGRAAY NPW I
Sbjct: 240 NRKIPPLKYEYYYALLRDFPDLQFTINGGITSIEEVNAACTEGAHGVMVGRAAYGNPWQI 299
Query: 297 LGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNG 356
LG VD+ +YGAP S+TRRQVLE+Y VYGDSVL YG RPTVR++VKPLL LFH+ P N
Sbjct: 300 LGLVDSAVYGAPLRSITRRQVLEQYQVYGDSVLRIYGPRPTVREVVKPLLGLFHAEPRNV 359
Query: 357 LWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVE 394
+WKR DAAFRHCTTIKS FEETL IPD VLD+P+ E
Sbjct: 360 VWKRAVDAAFRHCTTIKSLFEETLGEIPDEVLDAPITE 397
>D7LTR8_ARALL (tr|D7LTR8) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_486864 PE=4 SV=1
Length = 405
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 271/338 (80%), Positives = 302/338 (89%), Gaps = 1/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMMEWTD+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QH
Sbjct: 34 YLPPSFSVAPMMEWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQANLDRFLAFSPQQH 93
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQ+GGSNVE LAKA +L++AYGYDEINLNCGCPSPKVAGHGCFGV LML PK V EA
Sbjct: 94 PIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVRLMLKPKLVGEA 153
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAANTNVPV+VKCRIGVDDHDSYDELCDFI+KVS+LSPT+HFI+HSRKALL GISPA
Sbjct: 154 MSAIAANTNVPVTVKCRIGVDDHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPA 213
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYEYFY L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW
Sbjct: 214 DNRRIPPLKYEYFYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQ 273
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
+LGHVDT +YG PS LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS G
Sbjct: 274 MLGHVDTAVYGVPSRGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENG 333
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
N LWKR+ADAAF+ C ++ S EE+L AIPD VLDSP+
Sbjct: 334 NSLWKRRADAAFKECRSVGSLLEESLRAIPDCVLDSPI 371
>K4AYB9_SOLLC (tr|K4AYB9) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc01g087290.2 PE=4 SV=1
Length = 439
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/402 (70%), Positives = 322/402 (80%), Gaps = 6/402 (1%)
Query: 2 MKFSGYSLAVSFSPVGSTVIR----NNCRFHVGXXXXXXXXXXXAKQQSHDKGVLP-NYY 56
MK +G+ L S +P S VIR ++ F+ + H ++ +
Sbjct: 13 MKSAGHCLIASITPFHS-VIRFGRFSSNLFYGSSSKQRTLCAYHQNSKLHSASLMAAERH 71
Query: 57 LPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHP 116
PPWFSVAPMM+WTD+HYRTLARLISK AWLYTEM+AAETIVYQ NLDRFLA+ P+QHP
Sbjct: 72 PPPWFSVAPMMDWTDNHYRTLARLISKKAWLYTEMIAAETIVYQTGNLDRFLAYGPEQHP 131
Query: 117 IVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAM 176
IVLQIGG+ +E LAKAT+LA YGYDEINLNCGCPSPKVAGHGCFGV LMLDPKFVAEAM
Sbjct: 132 IVLQIGGNKLENLAKATQLATPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAM 191
Query: 177 SAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAE 236
S IAANTNVPVSVKCRIGVDDHDSY+ELCDFI++VSS SPT+HFIIHSRKALLNGISPA+
Sbjct: 192 SVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYEVSSHSPTRHFIIHSRKALLNGISPAD 251
Query: 237 NRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHI 296
NR IPPLKYEY+Y LLRDFPDL FTINGGITS++EV AAR GA+GVM+GRAAY +PW I
Sbjct: 252 NRKIPPLKYEYYYALLRDFPDLQFTINGGITSIEEVNAARIEGAHGVMLGRAAYGHPWQI 311
Query: 297 LGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNG 356
LG VD+ IYGAP S+TRRQVLE+Y VYGDSVL YG +PTVR++VKPLL LFH+ P N
Sbjct: 312 LGLVDSAIYGAPLRSITRRQVLEQYQVYGDSVLRIYGPKPTVREVVKPLLGLFHAEPRNV 371
Query: 357 LWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPG 398
+WKR DAAFRHCTTIKS FEETL IPD VLD+P+ E G
Sbjct: 372 VWKRAVDAAFRHCTTIKSLFEETLGEIPDEVLDAPITEVPSG 413
>B9GFD0_POPTR (tr|B9GFD0) tRNA-dihydrouridine synthase OS=Populus trichocarpa
GN=POPTRDRAFT_797751 PE=3 SV=1
Length = 378
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/348 (78%), Positives = 306/348 (87%), Gaps = 3/348 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FSVAPMM+WTD+HYRT+AR+ISKHAWLYTEMLAAETIV+QQ +LDRFLAFSP+QH
Sbjct: 6 YRPPLFSVAPMMDWTDNHYRTVARIISKHAWLYTEMLAAETIVHQQGDLDRFLAFSPEQH 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGG+N++ +AKAT LAN+YGYDEINLNCGCPSPKVAGHGCFGV LMLDPKFV EA
Sbjct: 66 PIVLQIGGNNLDNIAKATRLANSYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVGEA 125
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAANT+VPVSVKCRIG+DDHDSY+ELCDFI+KVSSLSPTKHFIIHSRKALLNGISPA
Sbjct: 126 MSVIAANTDVPVSVKCRIGLDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPA 185
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYEY+Y LLRDFPDL FTINGGI VDEV AA GA+GVMVGRAAYN W+
Sbjct: 186 DNRRIPPLKYEYYYALLRDFPDLRFTINGGINCVDEVNAALREGAHGVMVGRAAYNYLWN 245
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
L HVDT IYGAPS LTRRQVLE+Y VYGD+VLG YG+ RP +RD++KPL F+S PG
Sbjct: 246 TLAHVDTAIYGAPSSGLTRRQVLEQYQVYGDAVLGTYGNSRPNIRDLIKPLFGFFYSEPG 305
Query: 355 NGLWKRKADAAF--RHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
N LWKRKADAAF ++ TT+KSFFEETLVAIPD+VLDS E GR+
Sbjct: 306 NNLWKRKADAAFQMKNITTVKSFFEETLVAIPDAVLDSHAAELPSGRK 353
>Q8LFT6_ARATH (tr|Q8LFT6) Putative uncharacterized protein OS=Arabidopsis
thaliana PE=2 SV=1
Length = 404
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 268/338 (79%), Positives = 301/338 (89%), Gaps = 1/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QH
Sbjct: 34 YLPPSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQH 93
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQ+GGSNVE LAKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVSLML PK V EA
Sbjct: 94 PIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEA 153
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAANTNVPV+VKCRIGVD+HDSYDELCDFI+KVS+LSPT+HFI+HSRKALL GISPA
Sbjct: 154 MSAIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPA 213
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYEY+Y L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW
Sbjct: 214 DNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQ 273
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
LGHVDT +YG PS LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS
Sbjct: 274 TLGHVDTAVYGVPSSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENA 333
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
N LWKR+ADAAF+ C ++ S EE+L AIPD VLDSP+
Sbjct: 334 NSLWKRRADAAFKECRSVGSLLEESLRAIPDCVLDSPI 371
>Q8H128_ARATH (tr|Q8H128) FMN-linked oxidoreductase-like protein protein
OS=Arabidopsis thaliana GN=AT3G63510 PE=2 SV=1
Length = 419
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 268/338 (79%), Positives = 301/338 (89%), Gaps = 1/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QH
Sbjct: 49 YLPPSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQH 108
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQ+GGSNVE LAKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVSLML PK V EA
Sbjct: 109 PIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEA 168
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAANTNVPV+VKCRIGVD+HDSYDELCDFI+KVS+LSPT+HFI+HSRKALL GISPA
Sbjct: 169 MSAIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPA 228
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYEY+Y L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW
Sbjct: 229 DNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQ 288
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
LG VDT +YG PS LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS G
Sbjct: 289 TLGQVDTAVYGVPSSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENG 348
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
N LWKR+ADAAF+ C ++ S EE+L AIPD VLDSP+
Sbjct: 349 NSLWKRRADAAFKECRSVGSLLEESLRAIPDCVLDSPI 386
>B9HNQ6_POPTR (tr|B9HNQ6) tRNA-dihydrouridine synthase OS=Populus trichocarpa
GN=POPTRDRAFT_557785 PE=3 SV=1
Length = 380
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/347 (77%), Positives = 302/347 (87%), Gaps = 3/347 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FSVAPMMEWTD HYRT+AR+ISKHAWLYTEMLAAETIVYQQ NLDRFLAF +QH
Sbjct: 6 YRPPLFSVAPMMEWTDKHYRTVARIISKHAWLYTEMLAAETIVYQQGNLDRFLAFPSEQH 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGG+N++ +AKAT+LANAYG+DEINLNCGCPS KVAGHGCFG LMLDPKFV+EA
Sbjct: 66 PIVLQIGGNNLDNIAKATQLANAYGFDEINLNCGCPSAKVAGHGCFGARLMLDPKFVSEA 125
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAANT+VPVSVKCRIGVDDHDSY+ELCDFI+KVSSLSPTKHFIIHSRKALLNGISPA
Sbjct: 126 MSVIAANTDVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPA 185
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYEY+Y LLRDFPDL FTINGGI VDEV AA GA+GVMVGRAAYNN W+
Sbjct: 186 DNRRIPPLKYEYYYALLRDFPDLRFTINGGIDCVDEVNAALREGAHGVMVGRAAYNNLWN 245
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPG 354
L HVD+ +YG PS LTRRQVLE+Y VYGD+VLG YG +RP +R++++PL F+S PG
Sbjct: 246 TLAHVDSAVYGEPSSGLTRRQVLEQYQVYGDAVLGTYGNNRPNMRELIRPLSGFFYSEPG 305
Query: 355 NGLWKRKADAAF--RHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGR 399
N LWKRKADAAF ++ T+KSFFEETL AIPD+VLDSPV E GR
Sbjct: 306 NSLWKRKADAAFLNKNIKTVKSFFEETLAAIPDAVLDSPVAELPSGR 352
>K4AYC0_SOLLC (tr|K4AYC0) tRNA-dihydrouridine synthase OS=Solanum lycopersicum
GN=Solyc01g087300.2 PE=3 SV=1
Length = 372
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 264/341 (77%), Positives = 296/341 (86%)
Query: 54 NYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPD 113
+Y PPWFSVAPMMEWTD+HYRTLARLISK AWLY+EMLAAETIVYQ NLDRFLA+ P+
Sbjct: 4 EHYPPPWFSVAPMMEWTDNHYRTLARLISKKAWLYSEMLAAETIVYQTGNLDRFLAYGPE 63
Query: 114 QHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVA 173
QHPIVLQIGG+N+E LAKAT+LA YGYDEIN NCGCPSP+VAGHGCFGV LMLDPKFVA
Sbjct: 64 QHPIVLQIGGNNLENLAKATQLATPYGYDEINFNCGCPSPRVAGHGCFGVRLMLDPKFVA 123
Query: 174 EAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGIS 233
EAM IAANTNVPVSVKCRIG+DDHDSY+ELCDFI+KVSS SPT+HFIIHSRKALLNGIS
Sbjct: 124 EAMCVIAANTNVPVSVKCRIGLDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGIS 183
Query: 234 PAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNP 293
PA+NR IPPLKYEY+Y LLRDFPDL FTINGGI S+DEV AAR GA+GVM+GRAAY+NP
Sbjct: 184 PADNRRIPPLKYEYYYALLRDFPDLQFTINGGINSIDEVNAARLEGAHGVMLGRAAYSNP 243
Query: 294 WHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAP 353
W ILG VD+ +YGAP S+TRRQVLE+Y VYGDSV+ YG +P +RD++KPLL LFH+ P
Sbjct: 244 WQILGLVDSAVYGAPLRSITRRQVLEQYQVYGDSVVRMYGLKPHIRDVMKPLLGLFHAEP 303
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVE 394
N +WKRK DAA CTTIKS EETL IPD VLD+P+ E
Sbjct: 304 RNVVWKRKVDAALLRCTTIKSILEETLGEIPDRVLDAPLTE 344
>Q9FI41_ARATH (tr|Q9FI41) tRNA-dihydrouridine synthase OS=Arabidopsis thaliana
GN=AT5G47970 PE=2 SV=1
Length = 387
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/346 (76%), Positives = 295/346 (85%), Gaps = 1/346 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FS+APMM WTD+HYRTLARLI+KHAWLYTEMLAAETIVYQ+DNLD FLAFSPDQH
Sbjct: 7 YSPPLFSIAPMMGWTDNHYRTLARLITKHAWLYTEMLAAETIVYQEDNLDSFLAFSPDQH 66
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGG N+E LAKAT LANAY YDEIN NCGCPSPKV+G GCFG LMLDPKFV EA
Sbjct: 67 PIVLQIGGRNLENLAKATRLANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVGEA 126
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAANTN V+VKCRIGVDDHDSY+ELCDFI VSSLSPTKHFIIHSRKALL+G+SP+
Sbjct: 127 MSVIAANTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPS 186
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYE+F+ LLRDFPDL FTINGGI SV E AA +GA+GVM+GRA Y NPWH
Sbjct: 187 DNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAVYYNPWH 246
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
ILGHVDTV+YG+PS +TRRQVLEKY +YG+SVLGKYG RP +RDIV+PL+NLFHS G
Sbjct: 247 ILGHVDTVVYGSPSSGITRRQVLEKYKLYGESVLGKYGKGRPNLRDIVRPLINLFHSESG 306
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
NG WKR+ DAA HCTT++SF +E L AIPD VLDS V+ GR
Sbjct: 307 NGQWKRRTDAALLHCTTLQSFLDEVLPAIPDYVLDSSAVKEATGRE 352
>M4F8V5_BRARP (tr|M4F8V5) tRNA-dihydrouridine synthase OS=Brassica rapa subsp.
pekinensis GN=Bra037517 PE=3 SV=1
Length = 383
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/346 (76%), Positives = 298/346 (86%), Gaps = 1/346 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FS+APMM WTD+HYRTLARLISKHAWLYTEMLAAETIVYQ++NLD FLAFSPDQH
Sbjct: 7 YRPPLFSIAPMMGWTDNHYRTLARLISKHAWLYTEMLAAETIVYQEENLDSFLAFSPDQH 66
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGG N++ LAKAT+LANAYGYDEIN NCGCPSPKV+G GCFG ML+PKFV EA
Sbjct: 67 PIVLQIGGRNLDNLAKATKLANAYGYDEINFNCGCPSPKVSGRGCFGAVHMLNPKFVGEA 126
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
M+ IAANTN V+VKCRIGVDDHDSY+ELCDF+ VSSLSPTKHFIIHSRKALL+G+SPA
Sbjct: 127 MTVIAANTNASVTVKCRIGVDDHDSYNELCDFVHIVSSLSPTKHFIIHSRKALLSGLSPA 186
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYEYF+ LLRDFPDL FTINGGI SV E AA +GA+GVM+GRAA+ NPWH
Sbjct: 187 DNRRIPPLKYEYFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAAFYNPWH 246
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHR-PTVRDIVKPLLNLFHSAPG 354
ILGHVDT+IYG+PS +TRRQVLEKY VYG+SVLGKYG R P +RDIV+PL+NLFHS G
Sbjct: 247 ILGHVDTLIYGSPSSGITRRQVLEKYQVYGESVLGKYGKRGPNLRDIVRPLINLFHSEIG 306
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
NG WKR+ DAA HCTT+KSF +E L AIPD VLDS VV+ GR
Sbjct: 307 NGQWKRRTDAALLHCTTMKSFLDEVLPAIPDFVLDSSVVKEVTGRE 352
>D7MKC9_ARALL (tr|D7MKC9) tRNA-dihydrouridine synthase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_917642 PE=3 SV=1
Length = 388
Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/346 (76%), Positives = 294/346 (84%), Gaps = 1/346 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FS+APMM WTD+HYRTLARLI+KHAWLYTEMLAAETIVYQ+DNLD FLA+SPDQH
Sbjct: 7 YSPPLFSIAPMMGWTDNHYRTLARLITKHAWLYTEMLAAETIVYQEDNLDSFLAYSPDQH 66
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGG N+E LAKAT LANAYGYDEIN NCGCPSPKV+G GCFG LMLDPKFV EA
Sbjct: 67 PIVLQIGGRNLENLAKATRLANAYGYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVGEA 126
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IA+NTN V+VKCRIGVDDHDSY+ELCDFI VSSLSPTKHFIIHSRKALL+G+SP+
Sbjct: 127 MSVIASNTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPS 186
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYE+F+ LLRDFPDL FTINGGI SV E AA +GA+GVM+GRA Y NPWH
Sbjct: 187 DNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAVYYNPWH 246
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
LGHVDTVIYG+PS +TRRQVLEKY VYG+SVLGKYG RP +RDIV+PL+NLFHS G
Sbjct: 247 TLGHVDTVIYGSPSSGITRRQVLEKYQVYGESVLGKYGKGRPNLRDIVRPLINLFHSESG 306
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
NG WKR+ DAA HCTT+KSF +E L AIPD VLDS + GR
Sbjct: 307 NGQWKRRTDAALLHCTTLKSFLDEVLPAIPDFVLDSFAFKEATGRE 352
>R0EXD6_9BRAS (tr|R0EXD6) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10026573mg PE=4 SV=1
Length = 388
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/345 (75%), Positives = 294/345 (85%), Gaps = 1/345 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y PP FS+APMM WTD+HYRTLARLI+KHAWLYTEMLAAETIVYQ++NLD FLAFSPDQH
Sbjct: 7 YRPPLFSIAPMMGWTDNHYRTLARLITKHAWLYTEMLAAETIVYQEENLDSFLAFSPDQH 66
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGG N+E LAKAT LAN+YGYDEIN NCGCPSPKV+G GCFG ML+PKFV EA
Sbjct: 67 PIVLQIGGRNLENLAKATRLANSYGYDEINFNCGCPSPKVSGRGCFGARHMLNPKFVGEA 126
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAANT V+VKCRIGVDDHDSY+ELCDFI VSSLSPTKHFIIHSRKALL+G+SP+
Sbjct: 127 MSVIAANTKAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPS 186
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPLKYE+F+ LLRDFPDL FTINGGI SV E AA +GA+GVM+GRA Y NPWH
Sbjct: 187 DNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAVYYNPWH 246
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
LGHVDTVIYG+PS +TRRQVLEKY VYG+SVLGKYG RP +RDIV+PL+NLFHS G
Sbjct: 247 TLGHVDTVIYGSPSSGITRRQVLEKYQVYGESVLGKYGKGRPNLRDIVRPLINLFHSESG 306
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGR 399
NG WKR+ DAA HCTT+KSF +E L +IP+ VLDS VV+ GR
Sbjct: 307 NGQWKRRTDAALLHCTTLKSFLDEVLPSIPNFVLDSSVVKEATGR 351
>A2XRC7_ORYSI (tr|A2XRC7) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_15183 PE=2 SV=1
Length = 437
Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust.
Identities = 251/338 (74%), Positives = 297/338 (87%), Gaps = 1/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 60 HLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQH 119
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 120 PIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 179
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN NVPVS+KCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 180 MSAIAANCNVPVSIKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPA 239
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR +PPLKYEY++ LLRDFPD+ FT+NGGIT++D+V A+ GA+ VMVGRAAYNNPW+
Sbjct: 240 ENRKVPPLKYEYYFALLRDFPDVQFTLNGGITTIDQVTASIRQGAHRVMVGRAAYNNPWN 299
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPG 354
+LGHVD+ +YG P+ +RRQ+LE Y VYGDS++G+YG RP VR +VKPLLNLFHS PG
Sbjct: 300 MLGHVDSEVYGMPTRRSSRRQILESYQVYGDSIMGQYGPSRPNVRQLVKPLLNLFHSEPG 359
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
NGLWKRKAD+ RHC T++SF EETL AIP+SVLD+P+
Sbjct: 360 NGLWKRKADSTLRHCKTLESFLEETLDAIPNSVLDAPI 397
>A8MRX7_ARATH (tr|A8MRX7) tRNA-dihydrouridine synthase OS=Arabidopsis thaliana
GN=AT3G63510 PE=3 SV=1
Length = 386
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/324 (78%), Positives = 288/324 (88%), Gaps = 1/324 (0%)
Query: 70 TDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSNVEKL 129
+D+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QHPIVLQ+GGSNVE L
Sbjct: 30 SDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIVLQLGGSNVENL 89
Query: 130 AKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNVPVSV 189
AKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVSLML PK V EAMSAIAANTNVPV+V
Sbjct: 90 AKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVTV 149
Query: 190 KCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFY 249
KCRIGVD+HDSYDELCDFI+KVS+LSPT+HFI+HSRKALL GISPA+NR IPPLKYEY+Y
Sbjct: 150 KCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYY 209
Query: 250 GLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIYGAPS 309
L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW LG VDT +YG PS
Sbjct: 210 ALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQTLGQVDTAVYGVPS 269
Query: 310 CSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRH 368
LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS GN LWKR+ADAAF+
Sbjct: 270 SGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENGNSLWKRRADAAFKE 329
Query: 369 CTTIKSFFEETLVAIPDSVLDSPV 392
C ++ S EE+L AIPD VLDSP+
Sbjct: 330 CRSVGSLLEESLRAIPDCVLDSPI 353
>Q9LY64_ARATH (tr|Q9LY64) Putative uncharacterized protein MAA21_140
OS=Arabidopsis thaliana GN=MAA21_140 PE=4 SV=1
Length = 456
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/390 (68%), Positives = 301/390 (77%), Gaps = 53/390 (13%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QH
Sbjct: 34 YLPPSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQH 93
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDP------ 169
PIVLQ+GGSNVE LAKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVSLML P
Sbjct: 94 PIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKVRYFT 153
Query: 170 ------------------KFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELC------ 205
K V EAMSAIAANTNVPV+VKCRIGVD+HDSYDELC
Sbjct: 154 PPHDFKRYLLFLNFTLSFKLVGEAMSAIAANTNVPVTVKCRIGVDNHDSYDELCELFLLS 213
Query: 206 ----------------------DFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPL 243
DFI+KVS+LSPT+HFI+HSRKALL GISPA+NR IPPL
Sbjct: 214 VFLKSRMDLPLRSNTAFPLLLGDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPL 273
Query: 244 KYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTV 303
KYEY+Y L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW LG VDT
Sbjct: 274 KYEYYYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQTLGQVDTA 333
Query: 304 IYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPGNGLWKRKA 362
+YG PS LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS GN LWKR+A
Sbjct: 334 VYGVPSSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENGNSLWKRRA 393
Query: 363 DAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
DAAF+ C ++ S EE+L AIPD VLDSP+
Sbjct: 394 DAAFKECRSVGSLLEESLRAIPDCVLDSPI 423
>K3Y7H3_SETIT (tr|K3Y7H3) Uncharacterized protein OS=Setaria italica
GN=Si010164m.g PE=4 SV=1
Length = 430
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/340 (73%), Positives = 296/340 (87%), Gaps = 1/340 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLIS+HAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 53 HLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFPEEQH 112
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 113 PIVLQIGGSNLKNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 172
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELCDF+ KV S SPT+HFIIH+RKALL+GISPA
Sbjct: 173 MSAIAANCDVPVSVKCRIGVDDCDSYEELCDFVDKVVSNSPTRHFIIHARKALLSGISPA 232
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR +PPLKYEY++ LLRDFP++ FT+NGGIT++D+V A+ GA GVMVGR+AYNNPW+
Sbjct: 233 ENRKVPPLKYEYYFALLRDFPEVKFTLNGGITTIDQVSASIRQGAQGVMVGRSAYNNPWN 292
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPG 354
+LGHVD+ IYG P+ ++RRQ+LE Y YGDS++G+YG RP VR +VKPLL+LFHS PG
Sbjct: 293 MLGHVDSEIYGKPTRCISRRQILESYQFYGDSIIGRYGPSRPNVRQLVKPLLHLFHSEPG 352
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVE 394
N LWKRK+D+A R+C T+KSF EETL AIPD+VLD PV
Sbjct: 353 NNLWKRKSDSALRYCKTVKSFLEETLDAIPDTVLDKPVTR 392
>J3LWF3_ORYBR (tr|J3LWF3) tRNA-dihydrouridine synthase OS=Oryza brachyantha
GN=OB04G14780 PE=3 SV=1
Length = 368
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 245/328 (74%), Positives = 289/328 (88%), Gaps = 1/328 (0%)
Query: 66 MMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSN 125
MM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLD+FLAF +QHPIVLQIGGSN
Sbjct: 1 MMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDKFLAFPAEQHPIVLQIGGSN 60
Query: 126 VEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNV 185
++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +AMSAIAAN NV
Sbjct: 61 LDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDAMSAIAANCNV 120
Query: 186 PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKY 245
PVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALLNG+SPAENR +PPLKY
Sbjct: 121 PVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLNGLSPAENRKVPPLKY 180
Query: 246 EYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIY 305
EY++ LLRDFPD+ FT+NGGIT++D+V A+ GA+ VMVGRAAYNNPW++LGHVD+ +Y
Sbjct: 181 EYYFALLRDFPDVQFTLNGGITTIDQVNASIRQGAHRVMVGRAAYNNPWNMLGHVDSEVY 240
Query: 306 GAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNGLWKRKADA 364
G P+ + +RRQ+LE Y VYGDS++G+YG RP VR +VKPLLNLFHS PGNGLWKRKAD+
Sbjct: 241 GMPTRNSSRRQILESYQVYGDSIMGQYGPSRPNVRQLVKPLLNLFHSEPGNGLWKRKADS 300
Query: 365 AFRHCTTIKSFFEETLVAIPDSVLDSPV 392
RHC T++SF EETL AIPDSVLD+P+
Sbjct: 301 TLRHCKTLQSFLEETLEAIPDSVLDAPI 328
>B4FSX3_MAIZE (tr|B4FSX3) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 425
Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust.
Identities = 249/338 (73%), Positives = 290/338 (85%), Gaps = 1/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLIS+HAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 53 HLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFPEEQH 112
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN+E LAKATELAN Y YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 113 PIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 172
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAAN +VPVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 173 MSTIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKVISKSPTRHFIIHARKALLSGLSPA 232
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR IPPLKYEY++ LLRDFP++ FT+NGGIT+V +V A+ GA+GVMVGRAAYNNPW+
Sbjct: 233 ENRKIPPLKYEYYFALLRDFPEIKFTLNGGITNVSQVSASMRQGAHGVMVGRAAYNNPWN 292
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPG 354
+LGHVD IYG + ++RRQ+LE Y YGDS++ +YG RP VR +VKPLLNLFHS PG
Sbjct: 293 MLGHVDGEIYGKQTRYISRRQILENYQAYGDSIIDQYGPSRPNVRQLVKPLLNLFHSEPG 352
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
N LWKRKAD+A RHC T+K+F EETL AI DSVLD PV
Sbjct: 353 NSLWKRKADSALRHCKTVKTFLEETLDAISDSVLDKPV 390
>Q0JEG3_ORYSJ (tr|Q0JEG3) tRNA-dihydrouridine synthase OS=Oryza sativa subsp.
japonica GN=Os04g0278900 PE=2 SV=2
Length = 368
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/328 (74%), Positives = 289/328 (88%), Gaps = 1/328 (0%)
Query: 66 MMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSN 125
MM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLDRFLAF +QHPIVLQIGGSN
Sbjct: 1 MMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQHPIVLQIGGSN 60
Query: 126 VEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNV 185
++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +AMSAIAAN NV
Sbjct: 61 LDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDAMSAIAANCNV 120
Query: 186 PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKY 245
PVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPAENR++PPLKY
Sbjct: 121 PVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPAENRNVPPLKY 180
Query: 246 EYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIY 305
EY++ LLRDFPD+ FT+NGGIT++D+V A+ GA+ VMVGRAAYNNPW++LGHVD+ +Y
Sbjct: 181 EYYFALLRDFPDVQFTLNGGITTIDQVTASIRQGAHRVMVGRAAYNNPWNMLGHVDSEVY 240
Query: 306 GAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNGLWKRKADA 364
G P+ +RRQ+LE Y VYGDS++G+YG RP VR +VKPLLNLFHS PGNGLWKRKAD+
Sbjct: 241 GMPTRRSSRRQILESYQVYGDSIMGQYGPSRPNVRQLVKPLLNLFHSEPGNGLWKRKADS 300
Query: 365 AFRHCTTIKSFFEETLVAIPDSVLDSPV 392
RHC T++SF EETL AIP+SVLD+P+
Sbjct: 301 TLRHCKTLESFLEETLDAIPNSVLDAPI 328
>Q01LS4_ORYSA (tr|Q01LS4) tRNA-dihydrouridine synthase OS=Oryza sativa
GN=OSIGBa0113C11.1 PE=2 SV=1
Length = 368
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/328 (74%), Positives = 288/328 (87%), Gaps = 1/328 (0%)
Query: 66 MMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSN 125
MM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLDRFLAF +QHPIVLQIGGSN
Sbjct: 1 MMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQHPIVLQIGGSN 60
Query: 126 VEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNV 185
++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +AMSAIAAN NV
Sbjct: 61 LDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDAMSAIAANCNV 120
Query: 186 PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKY 245
PVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPAENR +PPLKY
Sbjct: 121 PVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPAENRKVPPLKY 180
Query: 246 EYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIY 305
EY++ LLRDFPD+ FT+NGGIT++D+V A+ GA+ VMVGRAAYNNPW++LGHVD+ +Y
Sbjct: 181 EYYFALLRDFPDVQFTLNGGITTIDQVTASIRQGAHRVMVGRAAYNNPWNMLGHVDSEVY 240
Query: 306 GAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNGLWKRKADA 364
G P+ +RRQ+LE Y VYGDS++G+YG RP VR +VKPLLNLFHS PGNGLWKRKAD+
Sbjct: 241 GMPTRRSSRRQILESYQVYGDSIMGQYGPSRPNVRQLVKPLLNLFHSEPGNGLWKRKADS 300
Query: 365 AFRHCTTIKSFFEETLVAIPDSVLDSPV 392
RHC T++SF EETL AIP+SVLD+P+
Sbjct: 301 TLRHCKTLESFLEETLDAIPNSVLDAPI 328
>I1IWD5_BRADI (tr|I1IWD5) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI5G03740 PE=4 SV=1
Length = 436
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 243/338 (71%), Positives = 291/338 (86%), Gaps = 1/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETI++Q+D LDRFLAF +QH
Sbjct: 59 YLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETILHQKDKLDRFLAFPAEQH 118
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELA+AY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 119 PIVLQIGGSNLDNLAKATELASAYSYDEINLNCGCPSGKVAGHGCFGAQLMYDPEFVGDA 178
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC+F+ K+ S SPT+HFIIH+RKALL+G+SPA
Sbjct: 179 MSAIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKIVSKSPTRHFIIHARKALLSGLSPA 238
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR+IPPLKYEY+Y LLRDFP++ FT+NGGIT++ +V + GA+ MVGRAAYNNPW+
Sbjct: 239 ENRTIPPLKYEYYYALLRDFPEVHFTLNGGITTIAQVSESIRQGAHRAMVGRAAYNNPWN 298
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPG 354
+LGHVD+ IYG P+ +RRQ+LE Y +YGDS++G+YG RP VR +VKPLL+LFHS PG
Sbjct: 299 MLGHVDSEIYGMPTSCSSRRQILESYQIYGDSIIGQYGITRPNVRQLVKPLLHLFHSEPG 358
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
N LWKRKAD+ RHC T++ F ETL AIPDSVLD+P+
Sbjct: 359 NSLWKRKADSTLRHCKTLEQFLNETLDAIPDSVLDAPI 396
>C5YDS7_SORBI (tr|C5YDS7) tRNA-dihydrouridine synthase OS=Sorghum bicolor
GN=Sb06g006720 PE=3 SV=1
Length = 368
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/328 (73%), Positives = 281/328 (85%), Gaps = 1/328 (0%)
Query: 66 MMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSN 125
MM+WTD+HYRTLARLIS+HAWLYTEM+ AETIV+Q+DNLDRFLAF +QHPIVLQIGGSN
Sbjct: 1 MMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFPEEQHPIVLQIGGSN 60
Query: 126 VEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNV 185
+E LAKATELAN Y YDEINLNCGCPS KVAGHGCFG LM +P+FV +AMS IAAN +V
Sbjct: 61 LENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFEPEFVGDAMSTIAANCDV 120
Query: 186 PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKY 245
PVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPAENR +PPLKY
Sbjct: 121 PVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPAENRKVPPLKY 180
Query: 246 EYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIY 305
EY++ LLRDFP + FT+NGGIT+V +V A+ GA+GVMVGRAAYNNPW++LGHVD IY
Sbjct: 181 EYYFALLRDFPGIKFTVNGGITNVGQVSASIRQGAHGVMVGRAAYNNPWNMLGHVDGEIY 240
Query: 306 GAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNGLWKRKADA 364
G + ++RRQ+LE Y YGDS++ +YG RP VR +VKPLLNLFHS PGN LWKRKAD+
Sbjct: 241 GKQTRCISRRQILESYQAYGDSIIDQYGPSRPNVRQLVKPLLNLFHSEPGNSLWKRKADS 300
Query: 365 AFRHCTTIKSFFEETLVAIPDSVLDSPV 392
A RHC T+K+F EETL AIPDSVLD PV
Sbjct: 301 ALRHCKTVKTFLEETLDAIPDSVLDKPV 328
>G7IWU8_MEDTR (tr|G7IWU8) tRNA-dihydrouridine synthase OS=Medicago truncatula
GN=MTR_3g030890 PE=3 SV=1
Length = 294
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/288 (84%), Positives = 266/288 (92%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPPWFSVAPMM+WTD+HYRTLARLISKHAWLYTEMLAAETIVYQ+ NLDRFLA+ PDQH
Sbjct: 6 YLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYPPDQH 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN+E LAKAT+LA+AYGYDEIN NCGCPSP+VAG GCFG LML+PKFVAEA
Sbjct: 66 PIVLQIGGSNLENLAKATKLADAYGYDEINFNCGCPSPRVAGRGCFGARLMLEPKFVAEA 125
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
+S IAANTNVPVSVKCRIGVDDHDSY+ELCDFI+KVSSLSP +HFIIHSRKALL G+SPA
Sbjct: 126 VSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGLSPA 185
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENRSIPPLKYEYFYGLLRDFPDLTFTINGGIT +DE+ AA + GA+GVM+GRAAY+NPWH
Sbjct: 186 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITCIDEINAALKTGAHGVMLGRAAYHNPWH 245
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVK 343
ILG+VD IYG PS LTRRQVLEKY VYGDSVL +YG RPTVRDIVK
Sbjct: 246 ILGNVDRAIYGVPSIGLTRRQVLEKYQVYGDSVLLQYGFRPTVRDIVK 293
>K7KQ19_SOYBN (tr|K7KQ19) tRNA-dihydrouridine synthase (Fragment) OS=Glycine max
PE=3 SV=1
Length = 281
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/302 (81%), Positives = 261/302 (86%), Gaps = 25/302 (8%)
Query: 43 KQQSHDK-GVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQ 101
KQQ +K GV+ YYLPPWFSVAPMM+WTDHHYRTL RLISKHAWLYTEMLAAETIV+Q+
Sbjct: 1 KQQLQEKPGVVARYYLPPWFSVAPMMDWTDHHYRTLVRLISKHAWLYTEMLAAETIVHQK 60
Query: 102 DNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCF 161
DNLDRFLA+SPDQHPIVLQIGGSN+E LAKATELAN Y YDEINLNCGCPSPKVAGHGCF
Sbjct: 61 DNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANVYCYDEINLNCGCPSPKVAGHGCF 120
Query: 162 GVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFI 221
GVSLML+PKFVAEAMSAIAA+TNVPVSVKCRIGVDDHDSY+ELCDFI++VSSLSPTKHFI
Sbjct: 121 GVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFI 180
Query: 222 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY 281
IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDL FTINGGI+ VDE
Sbjct: 181 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLRFTINGGISRVDE---------- 230
Query: 282 GVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDI 341
ILGHVD IY PSC LTRRQVLEKY+VYGDSVLGKYGHR T+RD+
Sbjct: 231 --------------ILGHVDAAIYDKPSCDLTRRQVLEKYLVYGDSVLGKYGHRSTLRDV 276
Query: 342 VK 343
VK
Sbjct: 277 VK 278
>I1IWD8_BRADI (tr|I1IWD8) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI5G03740 PE=4 SV=1
Length = 421
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/337 (69%), Positives = 279/337 (82%), Gaps = 14/337 (4%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETI++Q+D LDRFLAF +QH
Sbjct: 59 YLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETILHQKDKLDRFLAFPAEQH 118
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELA+AY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 119 PIVLQIGGSNLDNLAKATELASAYSYDEINLNCGCPSGKVAGHGCFGAQLMYDPEFVGDA 178
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC+F+ K+ S SPT+HFIIH+RKALL+G+SPA
Sbjct: 179 MSAIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKIVSKSPTRHFIIHARKALLSGLSPA 238
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR+IPPLKYEY+Y LLRDFP++ FT+NGGIT++ +V + GA+ MVGRAAYNNPW+
Sbjct: 239 ENRTIPPLKYEYYYALLRDFPEVHFTLNGGITTIAQVSESIRQGAHRAMVGRAAYNNPWN 298
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGN 355
+LGHVD+ IYG P+ +RRQ YG + RP VR +VKPLL+LFHS PGN
Sbjct: 299 MLGHVDSEIYGMPTSCSSRRQ-------YGIT-------RPNVRQLVKPLLHLFHSEPGN 344
Query: 356 GLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
LWKRKAD+ RHC T++ F ETL AIPDSVLD+P+
Sbjct: 345 SLWKRKADSTLRHCKTLEQFLNETLDAIPDSVLDAPI 381
>I1PJT9_ORYGL (tr|I1PJT9) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 433
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/344 (65%), Positives = 274/344 (79%), Gaps = 20/344 (5%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 63 HLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQH 122
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPK----- 170
PIVLQIGGSN++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+
Sbjct: 123 PIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEGMLCQ 182
Query: 171 -FVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALL 229
+ MS A + + + + R +F+ KV S SPT+HFIIH+RKALL
Sbjct: 183 LLLPIVMSQSALSAELVLMIVTR-------------EFVDKVVSKSPTRHFIIHARKALL 229
Query: 230 NGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAA 289
+G+SPAENR++PPLKYEY++ LLRDFPD+ FT+NGGIT++D+V A+ GA+ VMVGRAA
Sbjct: 230 SGLSPAENRNVPPLKYEYYFALLRDFPDVQFTLNGGITTIDQVTASIRQGAHRVMVGRAA 289
Query: 290 YNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNL 348
YNNPW++LGHVD+ +YG P+ +RRQ+LE Y VYGDS++G+YG RP VR + KPLLNL
Sbjct: 290 YNNPWNMLGHVDSEVYGMPTRRSSRRQILESYQVYGDSIMGQYGPSRPNVRQLAKPLLNL 349
Query: 349 FHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
FHS PGNGLWKRKAD+ RHC T++SF EETL AIP+SVLD+P+
Sbjct: 350 FHSEPGNGLWKRKADSTLRHCKTLESFLEETLDAIPNSVLDAPI 393
>M4DI26_BRARP (tr|M4DI26) tRNA-dihydrouridine synthase OS=Brassica rapa subsp.
pekinensis GN=Bra016153 PE=3 SV=1
Length = 369
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/340 (67%), Positives = 257/340 (75%), Gaps = 49/340 (14%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMMEWTD+HYRTLAR+I+KHAWLYTEM+AA+T+V+QQ NLDRFLAFSP QH
Sbjct: 47 YLPPLFSVAPMMEWTDNHYRTLARIITKHAWLYTEMIAAQTLVHQQTNLDRFLAFSPQQH 106
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQ+GGSNVE LAKA +L++ YGYDEINLNCGCPSPKVAGHGCFGVSLML+PK V EA
Sbjct: 107 PIVLQLGGSNVESLAKAAKLSHPYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGEA 166
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIA NTNVPV+VKCRIGVDDHDSYDELCDF++KVS+LSPT+HFI+HSRKALL GISPA
Sbjct: 167 MSAIADNTNVPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPA 226
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
+NR IPPL NPW
Sbjct: 227 DNRRIPPL------------------------------------------------NPWQ 238
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
LG VDT +YG PS LTRRQVLE+Y VY DSVLG G+ RP VRD+VKPLLN+FHS
Sbjct: 239 TLGLVDTAVYGVPSSGLTRRQVLEQYQVYADSVLGTQGNGRPNVRDLVKPLLNIFHSENE 298
Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVE 394
N LWKRKADAAF+ C T+ S EE+L AIPDSVLDSP+ E
Sbjct: 299 NSLWKRKADAAFKECKTVGSLLEESLKAIPDSVLDSPISE 338
>K7KQ18_SOYBN (tr|K7KQ18) Uncharacterized protein (Fragment) OS=Glycine max PE=4
SV=1
Length = 342
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/278 (80%), Positives = 245/278 (88%), Gaps = 6/278 (2%)
Query: 1 MMKFSGYSLAVSFSPVGSTVIRNNCRFHVGXXXXXXXX-----XXXAKQQSHDK-GVLPN 54
MMK +GYSLAVSF+P+ S V+++N RF +G KQQ +K GV+
Sbjct: 61 MMKLAGYSLAVSFAPISSNVVKSNGRFTLGISHRNTCSYRLFSTHAQKQQLQEKPGVVAR 120
Query: 55 YYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQ 114
YYLPPWFSVAPMM+WTDHHYRTL RLISKHAWLYTEMLAAETIV+Q+DNLDRFLA+SPDQ
Sbjct: 121 YYLPPWFSVAPMMDWTDHHYRTLVRLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPDQ 180
Query: 115 HPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAE 174
HPIVLQIGGSN+E LAKATELAN Y YDEINLNCGCPSPKVAGHGCFGVSLML+PKFVAE
Sbjct: 181 HPIVLQIGGSNIENLAKATELANVYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAE 240
Query: 175 AMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISP 234
AMSAIAA+TNVPVSVKCRIGVDDHDSY+ELCDFI++VSSLSPTKHFIIHSRKALLNGISP
Sbjct: 241 AMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISP 300
Query: 235 AENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEV 272
AENRSIPPLKYEYFYGLLRDFPDL FTINGGI+ VDEV
Sbjct: 301 AENRSIPPLKYEYFYGLLRDFPDLRFTINGGISRVDEV 338
>I1IWE0_BRADI (tr|I1IWE0) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI5G03740 PE=4 SV=1
Length = 429
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/344 (63%), Positives = 267/344 (77%), Gaps = 20/344 (5%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETI++Q+D LDRFLAF +QH
Sbjct: 59 YLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETILHQKDKLDRFLAFPAEQH 118
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPK----- 170
PIVLQIGGSN++ LAKATELA+AY YDEINLNCGCPS KVAGHGCFG LM DP+
Sbjct: 119 PIVLQIGGSNLDNLAKATELASAYSYDEINLNCGCPSGKVAGHGCFGAQLMYDPEGMLCQ 178
Query: 171 -FVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALL 229
+ MS N + + + R +F+ K+ S SPT+HFIIH+RKALL
Sbjct: 179 LLLPIVMSPSVLNAELELMIVTR-------------EFVDKIVSKSPTRHFIIHARKALL 225
Query: 230 NGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAA 289
+G+SPAENR+IPPLKYEY+Y LLRDFP++ FT+NGGIT++ +V + GA+ MVGRAA
Sbjct: 226 SGLSPAENRTIPPLKYEYYYALLRDFPEVHFTLNGGITTIAQVSESIRQGAHRAMVGRAA 285
Query: 290 YNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNL 348
YNNPW++LGHVD+ IYG P+ +RRQ+LE Y +YGDS++G+YG RP VR +VKPLL+L
Sbjct: 286 YNNPWNMLGHVDSEIYGMPTSCSSRRQILESYQIYGDSIIGQYGITRPNVRQLVKPLLHL 345
Query: 349 FHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
FHS PGN LWKRKAD+ RHC T++ F ETL AIPDSVLD+P+
Sbjct: 346 FHSEPGNSLWKRKADSTLRHCKTLEQFLNETLDAIPDSVLDAPI 389
>N1QXG6_AEGTA (tr|N1QXG6) tRNA-dihydrouridine synthase A OS=Aegilops tauschii
GN=F775_02359 PE=4 SV=1
Length = 529
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/383 (59%), Positives = 278/383 (72%), Gaps = 48/383 (12%)
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP 112
P YLPP FSVAPMM+WTD+HYRTLARLIS+HAWLYTEM+ AETIV+Q+D LDRFLAF
Sbjct: 52 PGEYLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDKLDRFLAFPA 111
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
+QHPIVLQIGGSN++ LAKATELA+ Y YDEINLNCGCPS KVAGHGCFG LM DP+FV
Sbjct: 112 EQHPIVLQIGGSNLDNLAKATELASGYAYDEINLNCGCPSGKVAGHGCFGARLMYDPEFV 171
Query: 173 AEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGI 232
+AMSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+RKALL+G+
Sbjct: 172 GDAMSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHARKALLSGL 231
Query: 233 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
SPAENR +PPLKYEY+Y LLRDFP++ FT+NGG+T++++V + R+
Sbjct: 232 SPAENRKVPPLKYEYYYALLRDFPEVHFTLNGGLTTIEQVTMGTSHSNCVAAILRS---- 287
Query: 293 PWHILGHVD-------------------------TVIYG------------APSCSLTRR 315
W++ H++ T++ G CSL
Sbjct: 288 -WYLYDHIEQNEGIAIFLHMGHGQQPKWSDQGSGTILAGFRKGLGHVMECTTQFCSL--- 343
Query: 316 QVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRHCTTIKS 374
+L+ Y VYGDS++G+YG RP VR +VKPLL+LFHS PGN LWKRKAD+ RHC T+
Sbjct: 344 -ILQSYQVYGDSIIGQYGISRPNVRQLVKPLLHLFHSEPGNSLWKRKADSTLRHCKTLAQ 402
Query: 375 FFEETLVAIPDSVLDSPVV-EPT 396
F EETL AIPDSVLD+PV+ EP+
Sbjct: 403 FLEETLDAIPDSVLDAPVLMEPS 425
>K7KQ20_SOYBN (tr|K7KQ20) Uncharacterized protein (Fragment) OS=Glycine max PE=4
SV=1
Length = 260
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/276 (80%), Positives = 236/276 (85%), Gaps = 25/276 (9%)
Query: 43 KQQSHDK-GVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQ 101
KQQ +K GV+ YYLPPWFSVAPMM+WTDHHYRTL RLISKHAWLYTEMLAAETIV+Q+
Sbjct: 1 KQQLQEKPGVVARYYLPPWFSVAPMMDWTDHHYRTLVRLISKHAWLYTEMLAAETIVHQK 60
Query: 102 DNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCF 161
DNLDRFLA+SPDQHPIVLQIGGSN+E LAKATELAN Y YDEINLNCGCPSPKVAGHGCF
Sbjct: 61 DNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANVYCYDEINLNCGCPSPKVAGHGCF 120
Query: 162 GVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFI 221
GVSLML+PKFVAEAMSAIAA+TNVPVSVKCRIGVDDHDSY+ELCDFI++VSSLSPTKHFI
Sbjct: 121 GVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFI 180
Query: 222 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY 281
IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDL FTINGGI+ VDE
Sbjct: 181 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLRFTINGGISRVDE---------- 230
Query: 282 GVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQV 317
ILGHVD IY PSC LTRRQV
Sbjct: 231 --------------ILGHVDAAIYDKPSCDLTRRQV 252
>I1IWD7_BRADI (tr|I1IWD7) tRNA-dihydrouridine synthase OS=Brachypodium distachyon
GN=BRADI5G03740 PE=3 SV=1
Length = 371
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/291 (72%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETI++Q+D LDRFLAF +QH
Sbjct: 59 YLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETILHQKDKLDRFLAFPAEQH 118
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELA+AY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 119 PIVLQIGGSNLDNLAKATELASAYSYDEINLNCGCPSGKVAGHGCFGAQLMYDPEFVGDA 178
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC+F+ K+ S SPT+HFIIH+RKALL+G+SPA
Sbjct: 179 MSAIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKIVSKSPTRHFIIHARKALLSGLSPA 238
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR+IPPLKYEY+Y LLRDFP++ FT+NGGIT++ +V + GA+ MVGRAAYNNPW+
Sbjct: 239 ENRTIPPLKYEYYYALLRDFPEVHFTLNGGITTIAQVSESIRQGAHRAMVGRAAYNNPWN 298
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPL 345
+LGHVD+ IYG P+ +RRQ+LE Y +YGDS++G+YG RP VR +VK L
Sbjct: 299 MLGHVDSEIYGMPTSCSSRRQILESYQIYGDSIIGQYGITRPNVRQLVKNL 349
>I1IWD9_BRADI (tr|I1IWD9) tRNA-dihydrouridine synthase OS=Brachypodium distachyon
GN=BRADI5G03740 PE=3 SV=1
Length = 348
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/289 (72%), Positives = 251/289 (86%), Gaps = 1/289 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETI++Q+D LDRFLAF +QH
Sbjct: 59 YLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETILHQKDKLDRFLAFPAEQH 118
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELA+AY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 119 PIVLQIGGSNLDNLAKATELASAYSYDEINLNCGCPSGKVAGHGCFGAQLMYDPEFVGDA 178
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC+F+ K+ S SPT+HFIIH+RKALL+G+SPA
Sbjct: 179 MSAIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKIVSKSPTRHFIIHARKALLSGLSPA 238
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR+IPPLKYEY+Y LLRDFP++ FT+NGGIT++ +V + GA+ MVGRAAYNNPW+
Sbjct: 239 ENRTIPPLKYEYYYALLRDFPEVHFTLNGGITTIAQVSESIRQGAHRAMVGRAAYNNPWN 298
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVK 343
+LGHVD+ IYG P+ +RRQ+LE Y +YGDS++G+YG RP VR +VK
Sbjct: 299 MLGHVDSEIYGMPTSCSSRRQILESYQIYGDSIIGQYGITRPNVRQLVK 347
>A9U5E7_PHYPA (tr|A9U5E7) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_102618 PE=4 SV=1
Length = 402
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/338 (62%), Positives = 265/338 (78%), Gaps = 2/338 (0%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARL+SKHAWLYTEM+ A+TI++QQDNLD+FL F+ QH
Sbjct: 21 YLPPRFSVAPMMDWTDNHYRTLARLMSKHAWLYTEMVVADTIIHQQDNLDKFLKFNEVQH 80
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQ+GGS+ EKL KA+ LA+ Y YDEINLNCGCPS KVAGHGCFG SLML+ VAE
Sbjct: 81 PIVLQLGGSDPEKLLKASLLASVYEYDEINLNCGCPSEKVAGHGCFGASLMLESGLVAEC 140
Query: 176 MSAIAANT-NVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISP 234
M+AIA + PV+VKCRIGVDD DSYD L F+ VSS SPT+HF++H+RKA+L G+SP
Sbjct: 141 MAAIAEGSPGTPVTVKCRIGVDDFDSYDLLHKFVTTVSSSSPTQHFVVHARKAILKGLSP 200
Query: 235 AENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPW 294
A NR+IPPLKYEY Y L+RDFP+L FT+NGG+ + +V A + G +GVM+GRAAYN PW
Sbjct: 201 AANRTIPPLKYEYVYALIRDFPNLKFTLNGGVVNTHQVNEALQEGVFGVMLGRAAYNYPW 260
Query: 295 HILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAP 353
LG+VD +YG + LTRRQ+LEKY+ Y D+ L KYG +P+VR +VKPLL +FH+
Sbjct: 261 ATLGNVDNSVYGDSTPRLTRRQILEKYVEYADAELHKYGPKKPSVRHLVKPLLGIFHAES 320
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSP 391
G G+W+R D + R+ T+ + +ETL +PD VLDSP
Sbjct: 321 GAGVWRRAVDNSLRNAETVGALLKETLCVLPDFVLDSP 358
>D8SUW1_SELML (tr|D8SUW1) tRNA-dihydrouridine synthase OS=Selaginella
moellendorffii GN=SELMODRAFT_125523 PE=3 SV=1
Length = 363
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 253/336 (75%), Gaps = 7/336 (2%)
Query: 59 PWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIV 118
P SVAPMMEWTD+H+R LAR++S+ +WLYTEM+ AETIV+ +++L+R+L F QHPIV
Sbjct: 2 PQCSVAPMMEWTDNHFRALARILSRCSWLYTEMVVAETIVHHENDLERWLEFPAAQHPIV 61
Query: 119 LQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSA 178
LQ+GGSN+ L+KA +L +A+GYDEIN NCGCPS KVAGHGCFG LML P+ V EAM A
Sbjct: 62 LQLGGSNLANLSKAAKLVSAFGYDEINFNCGCPSSKVAGHGCFGARLMLSPRLVGEAMQA 121
Query: 179 IAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENR 238
I ++ PV+VKCRIGVDD DSYD+LC+F+ VSSLSPT+HFIIH+RKALL G+SPA+NR
Sbjct: 122 IGEESSAPVTVKCRIGVDDSDSYDQLCNFVSTVSSLSPTQHFIIHARKALLEGLSPAQNR 181
Query: 239 SIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEV-YAAREAGAYGVMVGRAAYNNPWHIL 297
PPLKYEY L+RDFPDL FT+NGGIT+V++V Y + G GVM+GRAAYN PW L
Sbjct: 182 VAPPLKYEYVLALMRDFPDLQFTLNGGITTVEQVNYLISDKGVNGVMLGRAAYNTPWCTL 241
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNG 356
D+ IYG P +TRRQVL +Y Y +SV+GKYG ++P +R +VKP+ NLFH G+
Sbjct: 242 ARADSCIYGMPERRITRRQVLREYEEYAESVIGKYGNNKPGIRVLVKPVANLFHGEKGSS 301
Query: 357 LWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
W++ D + E+T+ +PDSVLD+PV
Sbjct: 302 RWRQAIDE-----HSFSELLEKTMAVLPDSVLDTPV 332
>I1IWD6_BRADI (tr|I1IWD6) tRNA-dihydrouridine synthase OS=Brachypodium distachyon
GN=BRADI5G03740 PE=3 SV=1
Length = 320
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/262 (74%), Positives = 230/262 (87%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETI++Q+D LDRFLAF +QH
Sbjct: 59 YLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETILHQKDKLDRFLAFPAEQH 118
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELA+AY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 119 PIVLQIGGSNLDNLAKATELASAYSYDEINLNCGCPSGKVAGHGCFGAQLMYDPEFVGDA 178
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC+F+ K+ S SPT+HFIIH+RKALL+G+SPA
Sbjct: 179 MSAIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKIVSKSPTRHFIIHARKALLSGLSPA 238
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR+IPPLKYEY+Y LLRDFP++ FT+NGGIT++ +V + GA+ MVGRAAYNNPW+
Sbjct: 239 ENRTIPPLKYEYYYALLRDFPEVHFTLNGGITTIAQVSESIRQGAHRAMVGRAAYNNPWN 298
Query: 296 ILGHVDTVIYGAPSCSLTRRQV 317
+LGHVD+ IYG P+ +RRQV
Sbjct: 299 MLGHVDSEIYGMPTSCSSRRQV 320
>A9RCX2_PHYPA (tr|A9RCX2) tRNA-dihydrouridine synthase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_54986 PE=3 SV=1
Length = 373
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 256/344 (74%), Gaps = 4/344 (1%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YLPP FSVAPMM+WT++H+RT+ARL+SKHAWLYTEM+ +TI YQQDNLD L F H
Sbjct: 10 YLPPRFSVAPMMDWTNNHFRTIARLMSKHAWLYTEMVVDDTINYQQDNLDMILKFPESHH 69
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQ+GG N EKL +A++LA+ YGYDEINLNCGCPS V G FG +LML+P+ V +
Sbjct: 70 PIVLQLGGCNPEKLFRASQLASLYGYDEINLNCGCPSDNVTGRS-FGAALMLEPELVGQC 128
Query: 176 MSAIAANT-NVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISP 234
++AIA + PVSVKCRIGVDD DSYD L +FI VSS SPTKHFIIH+RKA+L G+SP
Sbjct: 129 VTAIAKGSPGTPVSVKCRIGVDDFDSYDFLHNFIRIVSSTSPTKHFIIHARKAVLKGLSP 188
Query: 235 AENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPW 294
ENR IPPLKY+Y + L+RDFP+L FT+NGG+ + +V A G +GVM+GR AYN+PW
Sbjct: 189 DENRRIPPLKYDYVFALMRDFPNLKFTLNGGVVGIHQVNEALNRGVFGVMLGRTAYNSPW 248
Query: 295 HILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAP 353
+L +VD V+YG + LTRRQ+LEKY+VYGD+ L +YG+ +P +R I +PL LF+
Sbjct: 249 SVLANVDRVVYGDMTPVLTRRQILEKYVVYGDAELHRYGYKKPGIRQIAQPLSGLFYREK 308
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVL-DSPVVEPT 396
G GLW+R D R T+ + +TL IPDSVL DSP +E +
Sbjct: 309 GVGLWRRALDEYIRSSQTLHALLRDTLRVIPDSVLDDSPKLEES 352
>D8RYN8_SELML (tr|D8RYN8) tRNA-dihydrouridine synthase OS=Selaginella
moellendorffii GN=SELMODRAFT_104800 PE=3 SV=1
Length = 358
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/322 (60%), Positives = 245/322 (76%), Gaps = 5/322 (1%)
Query: 59 PWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIV 118
P SVAPMMEWTD+H+R LAR++S+ +WLYTEM+ AETIV+ +++L+R+L F QHPIV
Sbjct: 2 PQCSVAPMMEWTDNHFRALARILSRCSWLYTEMVVAETIVHHENDLERWLEFPAAQHPIV 61
Query: 119 LQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSA 178
LQ+GGSN+ L+KA +L +A+GYDEIN NCGCPS KVAGHGCFG LML P+ V EAM A
Sbjct: 62 LQLGGSNLANLSKAAKLVSAFGYDEINFNCGCPSSKVAGHGCFGARLMLSPRLVGEAMQA 121
Query: 179 IAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENR 238
IA ++ PV+VKCRIGVDD DSYD+LC+F+ VSSLSPT+HFIIH+RKALL G+SPA+NR
Sbjct: 122 IAEESSAPVTVKCRIGVDDSDSYDQLCNFVSTVSSLSPTRHFIIHARKALLEGLSPAQNR 181
Query: 239 SIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEV-YAAREAGAYGVMVGRAAYNNPWHIL 297
PPLKYEY L+RDFPDL FT+NGGIT+V++V Y + G GVM+GRAAYN PW L
Sbjct: 182 VAPPLKYEYVLALMRDFPDLQFTLNGGITTVEQVNYLITDKGVNGVMLGRAAYNTPWCTL 241
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNG 356
D+ IYG P +TRRQVL +Y Y +SV+GKYG ++P +R +VKP+ NLFH G+
Sbjct: 242 ARADSCIYGMPERRITRRQVLREYEEYAESVIGKYGNNKPGIRVLVKPVANLFHGEKGSS 301
Query: 357 LWKRKADAAFRHC---TTIKSF 375
W++ D RH T+ SF
Sbjct: 302 RWRQAIDEHVRHAKASNTLSSF 323
>R0H9Q3_9BRAS (tr|R0H9Q3) Uncharacterized protein (Fragment) OS=Capsella rubella
GN=CARUB_v10019526mg PE=4 SV=1
Length = 331
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 235/325 (72%), Gaps = 64/325 (19%)
Query: 105 DRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVS 164
DRFLAFSP QHPIVLQ+GGSNVE LAKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVS
Sbjct: 1 DRFLAFSPQQHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVS 60
Query: 165 LMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDEL-C----------DFIFKVSS 213
LML PK V EAMSAIAANT+VPV+VKCRIGVDDHDSYDEL C DF++KVS+
Sbjct: 61 LMLKPKLVGEAMSAIAANTSVPVTVKCRIGVDDHDSYDELYCTNTPFSLLLGDFVYKVST 120
Query: 214 LSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVY 273
LSPT+HFIIHSRKALL GISPA+NR IPPLKYEY+Y L+RDFPDL FTINGGITSV +V
Sbjct: 121 LSPTRHFIIHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLGFTINGGITSVSKVN 180
Query: 274 AAREAGAYGVMVGRAAYN-------------------------NPWHILGHVDTVIYGAP 308
AA + GA+GVMVGRAAYN +PW +LG VDT +YG P
Sbjct: 181 AALKEGAHGVMVGRAAYNKYVKFSSIGLSSISYFFLDSPSILDSPWQMLGPVDTAVYGVP 240
Query: 309 SCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFR 367
S LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VK
Sbjct: 241 SSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVK------------------------ 276
Query: 368 HCTTIKSFFEETLVAIPDSVLDSPV 392
++ S EE+L+AIPDSVLDSP+
Sbjct: 277 ---SVGSLLEESLMAIPDSVLDSPI 298
>C0PDX7_MAIZE (tr|C0PDX7) tRNA-dihydrouridine synthase OS=Zea mays PE=2 SV=1
Length = 296
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/237 (76%), Positives = 210/237 (88%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLIS+HAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 53 HLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFPEEQH 112
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN+E LAKATELAN Y YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 113 PIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 172
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MS IAAN +VPVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 173 MSTIAANCDVPVSVKCRIGVDDRDSYEELCEFVDKVISKSPTRHFIIHARKALLSGLSPA 232
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
ENR IPPLKYEY++ LLRDFP++ FT+NGGIT+V +V A+ GA+GVMVGRAAYN
Sbjct: 233 ENRKIPPLKYEYYFALLRDFPEIKFTLNGGITNVSQVSASMRQGAHGVMVGRAAYNK 289
>C0Z2A1_ARATH (tr|C0Z2A1) AT3G63510 protein OS=Arabidopsis thaliana GN=AT3G63510
PE=2 SV=1
Length = 261
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/228 (75%), Positives = 196/228 (85%), Gaps = 1/228 (0%)
Query: 166 MLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSR 225
ML PK V EAMSAIAANTNVPV+VKCRIGVD+HDSYDELCDFI+KVS+LSPT+HFI+HSR
Sbjct: 1 MLKPKLVGEAMSAIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSR 60
Query: 226 KALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMV 285
KALL GISPA+NR IPPLKYEY+Y L+RDFPDL FTINGGITSV +V AA + GA+GVMV
Sbjct: 61 KALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMV 120
Query: 286 GRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKP 344
GRAAYNNPW LG VDT +YG PS LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKP
Sbjct: 121 GRAAYNNPWQTLGQVDTAVYGVPSSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKP 180
Query: 345 LLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
LLNLFHS GN LWKR+ADAAF+ C ++ S EE+L AIPD VLDSP+
Sbjct: 181 LLNLFHSENGNSLWKRRADAAFKECRSVGSLLEESLRAIPDCVLDSPI 228
>I0YUC4_9CHLO (tr|I0YUC4) Dus-domain-containing protein OS=Coccomyxa
subellipsoidea C-169 GN=COCSUDRAFT_53924 PE=4 SV=1
Length = 433
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/348 (51%), Positives = 231/348 (66%), Gaps = 15/348 (4%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD HYR +ARLISKH WLYTEM+ +TI++ DRFL F P+Q PI
Sbjct: 58 PQLLSVAPMMDWTDVHYRQMARLISKHTWLYTEMVVDQTIIHNPIT-DRFLWFPPEQRPI 116
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
V Q+GGS+ KLA A + YGYDEINLNCGCPS +VAG GCFG SLML P VA +
Sbjct: 117 VCQLGGSDPAKLAAAAAIVARYGYDEINLNCGCPSDRVAGAGCFGASLMLQPANVATCCA 176
Query: 178 AI-AANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAE 236
A+ A + V+VKCR+GVDD DSY+ LC+FI V S HFI+H+RK LLNG+SP E
Sbjct: 177 AMRQALGSAAVTVKCRLGVDDVDSYEALCNFIRVVHEGSGVSHFIMHARKCLLNGLSPHE 236
Query: 237 NRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAARE-----AGAYGVMVGRAAYN 291
NR+IPPL++E+ + L RDFP L F++NGG+ S + AA + A +GVM+GRAAYN
Sbjct: 237 NRTIPPLRHEWVWALNRDFPHLEFSLNGGLDSCHQAAAALQHSVDGASIHGVMIGRAAYN 296
Query: 292 NPWHILGHVDTVIYGAPSCSLT-RRQVLEKYIVYGDSVLGKYGHR------PTVRDIVKP 344
+PW L D ++GA + + T RR+VL KY+ Y D+V+G++G + P VR + +P
Sbjct: 297 HPWACLADADIAVFGAETNAATSRREVLAKYVEYADAVVGRFGMKPDGSKTPNVRTVARP 356
Query: 345 LLNLFHSAPGNGLWKRKADAA-FRHCTTIKSFFEETLVAIPDSVLDSP 391
LLNLF P W+R D A + T+ EE + +PD VLD+P
Sbjct: 357 LLNLFVGEPSGRKWRRMLDVALLKKPATVAEVVEEAIKCVPDHVLDAP 404
>M0X4X1_HORVD (tr|M0X4X1) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 268
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/234 (68%), Positives = 199/234 (85%), Gaps = 4/234 (1%)
Query: 166 MLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSR 225
M DP+FV +AMSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+R
Sbjct: 1 MYDPEFVGDAMSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHAR 60
Query: 226 KALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMV 285
KALL+G+SPAENR++PPLKYEY+Y LLRDFP++ FT+NGG+T++++V A+ GA+ VMV
Sbjct: 61 KALLSGLSPAENRTVPPLKYEYYYALLRDFPEVHFTLNGGLTTIEQVSASIRQGAHRVMV 120
Query: 286 GRAAYNNPWHILGHVDTVIYG-APSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVK 343
GRAAYNNPW++LGHVD+ IYG A SCS +RRQ+LE Y VYGDS++G+YG RP VR +VK
Sbjct: 121 GRAAYNNPWNMLGHVDSEIYGMATSCS-SRRQILESYQVYGDSIIGQYGISRPNVRQLVK 179
Query: 344 PLLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVV-EPT 396
PLL+LFHS PGN LWKR+AD+ RHC T+ F EETL AIPDSVLD+PV+ EP+
Sbjct: 180 PLLHLFHSEPGNSLWKRRADSTLRHCKTLAQFLEETLDAIPDSVLDAPVLREPS 233
>E1ZGG3_CHLVA (tr|E1ZGG3) tRNA-dihydrouridine synthase OS=Chlorella variabilis
GN=CHLNCDRAFT_23819 PE=3 SV=1
Length = 374
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/332 (49%), Positives = 223/332 (67%), Gaps = 8/332 (2%)
Query: 67 MEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSNV 126
M+WTD +YR LARLIS+H WLYTEM+ +TI++ +D+FL F P+QHPIV Q+GGS+
Sbjct: 1 MDWTDLYYRQLARLISRHTWLYTEMVVDQTIIHTP-FIDKFLWFPPEQHPIVCQLGGSDP 59
Query: 127 EKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNVP 186
LA+A + YGYDEINLNCGCPS +VAG GCFG ++ML P+ VA+ A+ +P
Sbjct: 60 TLLARAAAIVERYGYDEINLNCGCPSDRVAGAGCFGAAMMLRPQLVADCCKAMREAVLMP 119
Query: 187 VSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYE 246
++VKCR+GVD DSY +L +F+ VS S HF+IH+RK LL G++P +NR++PPL+YE
Sbjct: 120 ITVKCRLGVDSFDSYPQLVNFVEVVSKGSGVSHFVIHARKCLLKGLNPHQNRTVPPLRYE 179
Query: 247 YFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIYG 306
+ + L RDFP L F++NGG+ +++EV +A G GVMVGRAAYN PW LG D I+G
Sbjct: 180 WVWALKRDFPHLEFSLNGGVLTLEEVASALALGIMGVMVGRAAYNMPWDALGDADRAIFG 239
Query: 307 APSCSLT-RRQVLEKYIVYGDSVLGKY-----GHR-PTVRDIVKPLLNLFHSAPGNGLWK 359
A + + T RRQVL Y + DS++G + GH+ P VR +VKPLL +FH P W+
Sbjct: 240 AEANAATSRRQVLHDYAAWADSMIGHWRVEEDGHKSPNVRMLVKPLLGMFHGEPRAKKWR 299
Query: 360 RKADAAFRHCTTIKSFFEETLVAIPDSVLDSP 391
DAA + T+ + TL + LD+P
Sbjct: 300 AAVDAALKTAETVGEVLDATLPVLKPESLDAP 331
>Q7XWZ9_ORYSJ (tr|Q7XWZ9) OSJNBa0079F16.4 protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0079F16.4 PE=4 SV=1
Length = 1708
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 173/189 (91%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 60 HLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQH 119
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 120 PIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 179
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN NVPVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 180 MSAIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPA 239
Query: 236 ENRSIPPLK 244
ENR++PPLK
Sbjct: 240 ENRNVPPLK 248
>B9FE76_ORYSJ (tr|B9FE76) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_14110 PE=2 SV=1
Length = 257
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/190 (81%), Positives = 174/190 (91%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
+LPP FSVAPMM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q+DNLDRFLAF +QH
Sbjct: 60 HLPPLFSVAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQKDNLDRFLAFPAEQH 119
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
PIVLQIGGSN++ LAKATELANAY YDEINLNCGCPS KVAGHGCFG LM DP+FV +A
Sbjct: 120 PIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDA 179
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN NVPVSVKCRIGVDD DSY+ELC+F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 180 MSAIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPA 239
Query: 236 ENRSIPPLKY 245
ENR++PPLKY
Sbjct: 240 ENRNVPPLKY 249
>C1FGA1_MICSR (tr|C1FGA1) Predicted protein (Fragment) OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_84205 PE=4 SV=1
Length = 401
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/362 (46%), Positives = 231/362 (63%), Gaps = 28/362 (7%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVY-QQDNLDRFLAFSPDQHP 116
P SVAPMM++T H+R L RL+S+H WLYTEM +T+V+ LDR+L F HP
Sbjct: 4 PQLLSVAPMMDYTTAHFRHLCRLLSRHTWLYTEMEVDQTLVHTDHPRLDRYLDFPTATHP 63
Query: 117 IVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAM 176
VLQ+GGS+ E +A+AT +A YGYDEINLNCGCPSPKVAG G FG +LML+P+ V + +
Sbjct: 64 SVLQLGGSDPETMARATAVAAPYGYDEINLNCGCPSPKVAGKGAFGAALMLEPELVRDVV 123
Query: 177 SAIAANT-NVPVSVKCRIGVDDHDSYDELCDFIFKVS-SLSPTKH-----FIIHSRKALL 229
+A+ N+ PV+VKCRIGVDDHDSYD+LC F+ V+ ++ PT+ F IH+RKALL
Sbjct: 124 AAMRENSGGAPVTVKCRIGVDDHDSYDDLCRFVETVACAMVPTRTDGRPLFAIHARKALL 183
Query: 230 NGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDE-VYAAREAGA-------Y 281
G+SPAENR++PPL+YE+ Y L RDFP++ F +NGGI +++E AR G
Sbjct: 184 AGLSPAENRTVPPLRYEWAYALARDFPEVAFVVNGGIDTLEEAAEVARGVGVPTGGGRLV 243
Query: 282 GVMVGRAAYNNPWHILGHVDTVIYGAPSCSLT-RRQVLEKYIVYGDSVLGKYGHR----- 335
G M+GRA + +PW +L D ++GA S T RR +L +Y+ Y D+ G++G
Sbjct: 244 GTMIGRAVHADPWGVLSDADVRVFGAESNPRTSRRDLLNEYVKYCDATRGRFGTTKDGYS 303
Query: 336 -PTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRHCT-----TIKSFFEETLVAIPDSVLD 389
P+ R ++ PL NLF P +W+R+ D A + T+ E TL + D LD
Sbjct: 304 VPSTRHLMHPLQNLFLGEPNAKVWRRRVDEALKEDARNPDVTVGDILERTLGVLSDETLD 363
Query: 390 SP 391
+P
Sbjct: 364 AP 365
>M0X4X3_HORVD (tr|M0X4X3) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 258
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/224 (69%), Positives = 191/224 (85%), Gaps = 4/224 (1%)
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 1 MSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHARKALLSGLSPA 60
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR++PPLKYEY+Y LLRDFP++ FT+NGG+T++++V A+ GA+ VMVGRAAYNNPW+
Sbjct: 61 ENRTVPPLKYEYYYALLRDFPEVHFTLNGGLTTIEQVSASIRQGAHRVMVGRAAYNNPWN 120
Query: 296 ILGHVDTVIYG-APSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAP 353
+LGHVD+ IYG A SCS +RRQ+LE Y VYGDS++G+YG RP VR +VKPLL+LFHS P
Sbjct: 121 MLGHVDSEIYGMATSCS-SRRQILESYQVYGDSIIGQYGISRPNVRQLVKPLLHLFHSEP 179
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVV-EPT 396
GN LWKR+AD+ RHC T+ F EETL AIPDSVLD+PV+ EP+
Sbjct: 180 GNSLWKRRADSTLRHCKTLAQFLEETLDAIPDSVLDAPVLREPS 223
>Q012U0_OSTTA (tr|Q012U0) Nitrogen regulation family protein (ISS)
OS=Ostreococcus tauri GN=Ot08g03520 PE=4 SV=1
Length = 490
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 226/355 (63%), Gaps = 25/355 (7%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETI---VYQQDNLDRFLAFSPDQHPI 117
SVAPMME+T H+R + RL+S WL+TEM +T+ V + +DRFL + +
Sbjct: 102 LSVAPMMEYTTAHFRVMCRLMSAKTWLWTEMEVDQTLTHAVLEGTRVDRFLDYPVETAAT 161
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
VLQ+GGS+ E L +AT +A YGY+EINLN GCPSPKVAG GCFG +LM +P+ VAE +
Sbjct: 162 VLQLGGSDPEILGRATAIAAPYGYEEINLNSGCPSPKVAGKGCFGAALMTEPRLVAECLQ 221
Query: 178 AIAAN--TNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
A+ N + PVS+KCRIGVD+ DSYD LC+++ + S T+ F +H+RKALLNG+SPA
Sbjct: 222 AMNENAPSGTPVSIKCRIGVDECDSYDALCEYVDTIVRASATRRFYVHARKALLNGLSPA 281
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY------GVMVGRAA 289
ENRS+PPLK+E+ Y L RDFP+ F +NGG+ ++ +V A G GVM+GR A
Sbjct: 282 ENRSVPPLKHEWAYALARDFPECEFHLNGGLKTLKDVENAIHRGPEGGGPIAGVMIGRQA 341
Query: 290 YNNPWHILGHVDTVIYGAPS--CSLTRRQVLEKYIVYGDSVLGKYG------HRPTVRDI 341
+ +PW +L DT I+G + C+ +RR LEKY+ Y D +G+YG P+VR +
Sbjct: 342 HADPWGLLSAADTTIFGESTNPCA-SRRDFLEKYVEYADDTIGRYGTAKDGYRIPSVRHM 400
Query: 342 VKPLLNLFHSAPGNGLWKRKADAAFRHC-----TTIKSFFEETLVAIPDSVLDSP 391
+ P+ NLFH N +W+R D + TT++S E TL I D LD+P
Sbjct: 401 MHPIQNLFHGCANNKMWRRLVDEELQKRSKKPDTTVRSILEATLGVIEDEDLDAP 455
>R7QF05_CHOCR (tr|R7QF05) Stackhouse genomic scaffold, scaffold_229 OS=Chondrus
crispus GN=CHC_T00004349001 PE=4 SV=1
Length = 489
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/348 (47%), Positives = 219/348 (62%), Gaps = 18/348 (5%)
Query: 59 PWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP------ 112
P +SVAPMME TD H+RTL+RLIS+ A LYTEM+ T++Y + + L P
Sbjct: 116 PRYSVAPMMEVTDRHFRTLSRLISRDAVLYTEMVVDRTLIYNEQLREYALRIPPLPNSSS 175
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
QHP+VLQ+GGS ++L A +A YGY E+NLNCGCPSPKVAG GCFG +LM P+ V
Sbjct: 176 SQHPVVLQLGGSVPDELEAAARIAAKYGYSEVNLNCGCPSPKVAGKGCFGAALMRAPEVV 235
Query: 173 AEAMSAIAA--NTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLN 230
AEA +AA PV+VKCRIGVDD DSYD L +F+ V KHFIIH+RKA+L
Sbjct: 236 AEATKKMAAVLPETTPVTVKCRIGVDDLDSYDFLRNFVEIVHQRGGVKHFIIHARKAILG 295
Query: 231 GISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAY 290
G+SPA+NRS+PPLKY Y + LL+DFPD+TFTINGG ++ V + G +GVMVGR
Sbjct: 296 GLSPAQNRSVPPLKYGYVHRLLQDFPDVTFTINGGFKTLSAVQEQLDVGVHGVMVGREVM 355
Query: 291 NNPWHILGHVDTVIYGAPSCS------LTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKP 344
+ PWH L VD + +G +C+ LTRR VL Y Y ++ + + G ++R +VKP
Sbjct: 356 DKPWHALCDVDRLFFGR-NCTPDDGTILTRRGVLRDYTAYAENEIERTGC--SIRAVVKP 412
Query: 345 LLNLFHSAPGNGLWKRKADAAFRH-CTTIKSFFEETLVAIPDSVLDSP 391
LL LFH P +++R D R ++ + D VLD+P
Sbjct: 413 LLQLFHGEPNGKIYRRAIDECLRDPALSVGDIINRASSVLSDDVLDAP 460
>A4S1U7_OSTLU (tr|A4S1U7) tRNA-dihydrouridine synthase (Fragment) OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_4136 PE=3 SV=1
Length = 355
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 227/354 (64%), Gaps = 23/354 (6%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQ---DNLDRFLAFSPDQHPI 117
SVAPMME+T H+R +ARL+S+ L+TEM +T+ + D +D+FL +
Sbjct: 2 LSVAPMMEYTTPHFRVMARLMSRRVMLWTEMEVDQTVTHSARDGDRVDKFLDYPAATFGT 61
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
VLQ+GGS E L +AT +A YGYDEINLN GCPSPKVAG GCFG +LM +P VAE ++
Sbjct: 62 VLQLGGSTPEYLGRATAIAAPYGYDEINLNSGCPSPKVAGKGCFGAALMAEPGLVAECLA 121
Query: 178 AIAANT--NVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
A+A N PVSVKCRIGVDD DSYD+LCD++ ++ + S T+ F +H+RKALL G+SPA
Sbjct: 122 AMAENAPEGTPVSVKCRIGVDDVDSYDDLCDYVERIVAGSSTRRFYVHARKALLAGLSPA 181
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA------YGVMVGRAA 289
ENR++PPLK+E+ Y L RDFP+ F +NGG+ ++++V + G G M+GR A
Sbjct: 182 ENRTVPPLKHEWAYALARDFPECEFHLNGGLKTLNDVKNVLKRGPEDGGPIVGAMIGRQA 241
Query: 290 YNNPWHILGHVDTVIYG-APSCSLTRRQVLEKYIVYGDSVLGKYG------HRPTVRDIV 342
+ +PW +L DT ++G A + S +RR L KY VY D +G+YG P+VR ++
Sbjct: 242 HADPWGLLSAADTTLFGEASNPSASRRDFLNKYAVYADETIGRYGTAKDGYRIPSVRHMM 301
Query: 343 KPLLNLFHSAPGNGLWKRKADAAFRHC-----TTIKSFFEETLVAIPDSVLDSP 391
P+ NLFH N W+R + + TT++S + TL+AI D LD+P
Sbjct: 302 HPIQNLFHGCANNKAWRRLVEEDLQKRSKHPDTTVRSVLDATLIAISDEDLDAP 355
>M0X4W5_HORVD (tr|M0X4W5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 215
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 184/216 (85%), Gaps = 3/216 (1%)
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 1 MSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHARKALLSGLSPA 60
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR++PPLKYEY+Y LLRDFP++ FT+NGG+T++++V A+ GA+ VMVGRAAYNNPW+
Sbjct: 61 ENRTVPPLKYEYYYALLRDFPEVHFTLNGGLTTIEQVSASIRQGAHRVMVGRAAYNNPWN 120
Query: 296 ILGHVDTVIYG-APSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAP 353
+LGHVD+ IYG A SCS +RRQ+LE Y VYGDS++G+YG RP VR +VKPLL+LFHS P
Sbjct: 121 MLGHVDSEIYGMATSCS-SRRQILESYQVYGDSIIGQYGISRPNVRQLVKPLLHLFHSEP 179
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLD 389
GN LWKR+AD+ RHC T+ F EETL AIPDSVLD
Sbjct: 180 GNSLWKRRADSTLRHCKTLAQFLEETLDAIPDSVLD 215
>M1V8B3_CYAME (tr|M1V8B3) Uncharacterized protein OS=Cyanidioschyzon merolae
strain 10D GN=CYME_CMK105C PE=4 SV=1
Length = 480
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/358 (47%), Positives = 222/358 (62%), Gaps = 29/358 (8%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPMM+ TD+H+RTL RL+SKHA LYTEM+ T+VY N D +LAF P Q PIVLQ
Sbjct: 80 FSVAPMMDVTDNHFRTLCRLLSKHALLYTEMVVDSTLVYNASNADHWLAFHPAQQPIVLQ 139
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ +K+ A E+A YGY IN+NCGCPS +VAG GCFG +LM D VA AIA
Sbjct: 140 LGGSDPQKMRAAAEIAAPYGYSAININCGCPSDRVAGRGCFGAALMKDAPGVAALCRAIA 199
Query: 181 --ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENR 238
+ P++VKCR+GVDD D+Y DF+ VS +P +HFIIH+RKA L G+SPAENR
Sbjct: 200 EVVPASTPITVKCRLGVDDLDTYSFARDFVQVVSENAPVRHFIIHARKAYLKGLSPAENR 259
Query: 239 SIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEV-YAAREAGAYGVMVGRAAYNNPWHIL 297
++PPL+Y+ L RDFP L F+INGGI ++ +V + YGVMVGRA N+PW L
Sbjct: 260 TVPPLRYDRVLALARDFPHLHFSINGGIRTMPQVRHFLDTEHLYGVMVGRAVMNHPWEAL 319
Query: 298 GHVDTVIYGAPSCSL-TRRQVLEKYIVYGDSVL---GKYGHR--------------PTVR 339
VD VI+G SC+ TRR VL+ Y Y D L YG P++
Sbjct: 320 AGVDAVIFGDDSCAQRTRRDVLQAYGAYVDKQLHAASIYGQETDERESCSRGSQWTPSLH 379
Query: 340 DIVKPLLNLFHSAPGNGLWKRKADAA------FRHCTTIKSFF--EETLVAIPDSVLD 389
++KP+LNLF P + W+++ A R +++KS F E L + +S LD
Sbjct: 380 VLLKPILNLFWGVPRSKEWRKRVQQATDEQTRIRRNSSVKSNFSWETFLPQVAESTLD 437
>M0X4W4_HORVD (tr|M0X4W4) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 211
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/226 (67%), Positives = 179/226 (79%), Gaps = 17/226 (7%)
Query: 166 MLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSR 225
M DP+FV +AMSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+R
Sbjct: 1 MYDPEFVGDAMSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHAR 60
Query: 226 KALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMV 285
KALL+G+SPAENR++PPLKYEY+Y LLRDFP EV A+ GA+ VMV
Sbjct: 61 KALLSGLSPAENRTVPPLKYEYYYALLRDFP--------------EVSASIRQGAHRVMV 106
Query: 286 GRAAYNNPWHILGHVDTVIYG-APSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVK 343
GRAAYNNPW++LGHVD+ IYG A SCS +RRQ+LE Y VYGDS++G+YG RP VR +VK
Sbjct: 107 GRAAYNNPWNMLGHVDSEIYGMATSCS-SRRQILESYQVYGDSIIGQYGISRPNVRQLVK 165
Query: 344 PLLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLD 389
PLL+LFHS PGN LWKR+AD+ RHC T+ F EETL AIPDSVLD
Sbjct: 166 PLLHLFHSEPGNSLWKRRADSTLRHCKTLAQFLEETLDAIPDSVLD 211
>K8EP49_9CHLO (tr|K8EP49) tRNA-dihydrouridine synthase A OS=Bathycoccus prasinos
GN=Bathy01g06360 PE=4 SV=1
Length = 571
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 218/356 (61%), Gaps = 26/356 (7%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNL-DRFLAFSPDQHPIVL 119
S+APMME+T +H+R L RL+SK WL+TEM T+ + L ++++ F+ +QHP+V+
Sbjct: 166 LSIAPMMEYTHNHFRYLCRLLSKRVWLWTEMEVDMTLKHVPVELRNKYVDFTLNQHPLVM 225
Query: 120 QIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAI 179
Q+GGS+ + L + LA +GYDEINLNCGCPS KVAG GCFG +LM DP VAE +A+
Sbjct: 226 QLGGSDADALGFSASLAKPHGYDEINLNCGCPSEKVAGKGCFGATLMRDPDLVAECCAAM 285
Query: 180 AANTN-VPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENR 238
A N + +P+SVKCRIGVD +DSYDEL F+ ++S SP + F +H RKALLNGISP++NR
Sbjct: 286 AKNADGIPISVKCRIGVDGNDSYDELYRFVETIASKSPVRRFHVHCRKALLNGISPSQNR 345
Query: 239 SIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYA---------AREAGAYGVMVGRAA 289
SIPPL++E+ Y L RDFP+ F +NGG+ +++EV A GVM+GR A
Sbjct: 346 SIPPLRHEWVYALARDFPECEFFLNGGVKTLEEVKTQLRCQPTDKATANTIKGVMIGRQA 405
Query: 290 YNNPWHILGHVDTVIYGAPS--CSLTRRQVLEKYIVYGDSVLGKYGHR------PTVRDI 341
+ +PW +L D ++G C +RR +L KY Y D+ GK G P R
Sbjct: 406 HADPWGLLSRADVELFGESENPCK-SRRDLLAKYAKYCDATQGKNGTMKDGSPVPAPRHF 464
Query: 342 VKPLLNLFHSAPGNGLWKRKADAAFRHCT------TIKSFFEETLVAIPDSVLDSP 391
+ + N+F +WKR D + T+ E TL IPD VLD+P
Sbjct: 465 MHSIQNIFAGCTNAKIWKRLVDDQLQGSRKKEPNLTVTEIMERTLGCIPDEVLDAP 520
>D7FQR5_ECTSI (tr|D7FQR5) FAD binding / catalytic/ tRNA dihydrouridine synthase
OS=Ectocarpus siliculosus GN=Esi_0207_0034 PE=4 SV=1
Length = 469
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 219/334 (65%), Gaps = 6/334 (1%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPD-QHPIVL 119
FS+APMME+TD H R L RL++ L+TEM+ + TI++ D+L RFL ++ + +HP+VL
Sbjct: 82 FSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVL 141
Query: 120 QIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAI 179
QIGGS+ + +A LA Y YD INLNCGCPS KVAG G FG +LM P V + A+
Sbjct: 142 QIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAM 201
Query: 180 --AANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A + P++VKCRIGVD+ DSY++L F+ +VS + HFI+H+RKA+L G+SPA+N
Sbjct: 202 KDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQN 261
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R+IPPLKY++ Y L++DFPD+ FT+NGG+ + +E + E GA+GVMVGR+ +NPW+
Sbjct: 262 RNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEEAVSCLEQGAHGVMVGRSWSSNPWY-W 320
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHR--PTVRDIVKPLLNLFHSAPGN 355
D++++GA LTRR+VLE+Y YG+ G + R + KP+ ++FH G
Sbjct: 321 SQADSMLFGAKDPGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGG 380
Query: 356 GLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLD 389
++ + R + +++L+A+P +D
Sbjct: 381 KKFRVALEGMLREDKSFGEIVQKSLLAMPQDQVD 414
>C1MRW1_MICPC (tr|C1MRW1) tRNA-dihydrouridine synthase (Fragment) OS=Micromonas
pusilla (strain CCMP1545) GN=MICPUCDRAFT_3699 PE=3 SV=1
Length = 376
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 227/374 (60%), Gaps = 41/374 (10%)
Query: 57 LPP-WFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVY-QQDNLDRFLAFSPDQ 114
LPP SVAPMM++T H+R + R++S+ WLYTEM +T+ + LDR+L F
Sbjct: 3 LPPQLLSVAPMMDYTTAHFRAMCRMLSRKTWLYTEMEVDQTLTHVDHPRLDRYLDFPLQT 62
Query: 115 HPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAE 174
HP VLQ+GGS+ E L +A +A Y YDE+NLNCGCPSPKVAG G FG +LML+P+ VA+
Sbjct: 63 HPSVLQLGGSDPESLGRAAAIAAPYAYDELNLNCGCPSPKVAGKGNFGAALMLEPELVAD 122
Query: 175 AMSAIAANT-NVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKH-------FIIHSRK 226
++A+AAN+ PV+VKCRIGVDD DSYD LC F+ V++ P + F IH+RK
Sbjct: 123 CVAAMAANSGGAPVTVKCRIGVDDVDSYDALCAFVETVAARMPPRRGEDARPLFAIHARK 182
Query: 227 ALLN-----------GISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYA- 274
ALL G+SPAENR++PPL++E+ + L RDFPD+ F INGGI +++E A
Sbjct: 183 ALLRRVLYTGSHTTAGLSPAENRTVPPLRHEWVHALARDFPDVAFAINGGINTLEEAVAI 242
Query: 275 AREAGA-------YGVMVGRAAYNNPWHILGHVDTVIYG-APSCSLTRRQVLEKYIVYGD 326
AR G G M+GR A+ +PW +L DT ++G A ++RR +LE Y Y D
Sbjct: 243 ARGEGTPVGGGRLVGTMIGRRAHADPWGLLARADTAVFGEASDPCVSRRALLETYAAYAD 302
Query: 327 SVLGKYGHR------PTVRDIVKPLLNLFHSAPGNGLWKRKADA-----AFRHCTTIKSF 375
+ +YG P++R ++ PL NLF P W+R+ D A R TT+
Sbjct: 303 ATWARYGTTKDGYAVPSIRHLMHPLQNLFLGEPNAKRWRREVDEVLKRDARRATTTVTGV 362
Query: 376 FEETLVAIPDSVLD 389
EETL + D LD
Sbjct: 363 LEETLRVLSDETLD 376
>K3X2Z4_PYTUL (tr|K3X2Z4) tRNA-dihydrouridine synthase OS=Pythium ultimum
GN=PYU1_G011567 PE=3 SV=1
Length = 364
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 225/352 (63%), Gaps = 23/352 (6%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
S+APMM+WTD HYR + RLI+K+ LYTEML +T+++QQ NLD FL + P+ LQ
Sbjct: 11 LSIAPMMDWTDRHYRYMMRLITKNTLLYTEMLVDQTLMHQQKNLDYFLGHDSVEAPLALQ 70
Query: 121 IGGSNVEKLAKATELANAY-GYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSA- 178
+GG+NVE L +L+N Y G+ EINLN GCPS V+ CFG LML+P+ V + S+
Sbjct: 71 LGGNNVEDLGAVAKLSNDYGGFCEINLNAGCPSSLVSSR-CFGARLMLEPERVRDICSSM 129
Query: 179 ---IAANTNVP-VSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISP 234
+A +TNVP V+VKCRIGVDDHDSY+EL F+ V+S S KHFI+H+RK +L G+SP
Sbjct: 130 IRNVAPSTNVPDVTVKCRIGVDDHDSYEELHHFVTTVAS-SGVKHFIVHARKCILKGLSP 188
Query: 235 AENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYA-AREAGAYGVMVGRAAYNNP 293
ENR++PPLKY++ Y L DFPDL FT+NGG+ S+ E GVM+GRAAYN P
Sbjct: 189 HENRTVPPLKYDFVYRLKADFPDLLFTLNGGVASIQHAKELLDETNIDGVMIGRAAYNTP 248
Query: 294 WHILGHVDTVIYGAP-SCSLTRRQVLEKYIVYGDSV---------LGKYGHRPTVRDIVK 343
W+ D +I+GA + +L+RR+++EKY+ Y D + LGK + ++K
Sbjct: 249 WN-FRDADRLIFGAERNPNLSRREIVEKYLDYADDLQAKWGSTVPLGKLNYTMRTSTLMK 307
Query: 344 PLLNLFHSAPGNGLWKRKADAAFRHCT---TIKSFFEETLVAIPDSVLDSPV 392
PLL LF+ G +KR+ A + H ++ E + +PD VLD+ V
Sbjct: 308 PLLTLFNGEYGGKAYKREITARWSHKGPRPELREMIESAMKVLPDEVLDARV 359
>M8ADJ6_TRIUA (tr|M8ADJ6) tRNA-dihydrouridine synthase A OS=Triticum urartu
GN=TRIUR3_31883 PE=4 SV=1
Length = 367
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/236 (61%), Positives = 182/236 (77%), Gaps = 7/236 (2%)
Query: 168 DPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKA 227
D FV +AMSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+RKA
Sbjct: 97 DKLFVGDAMSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHARKA 156
Query: 228 LLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGR 287
LL+G+SPAENR +PPLKYEY+Y LLRDFP++ FT+NGG+ ++++V + R
Sbjct: 157 LLSGLSPAENRKVPPLKYEYYYALLRDFPEVRFTLNGGLMTIEQVTMGTSHSNCVAAILR 216
Query: 288 AAY-----NNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDI 341
+ Y +PW++LGHVD+ IYG P+ +RRQ+LE Y VYGDS++G+YG RP VR +
Sbjct: 217 SWYLYDHIEHPWNMLGHVDSEIYGMPTPCSSRRQILESYQVYGDSIIGQYGISRPNVRQL 276
Query: 342 VKPLLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVV-EPT 396
VKPLL+LFHS PGN LWKRKAD+ RHC T+ F EETL AIPDSVLD+PV+ EP+
Sbjct: 277 VKPLLHLFHSEPGNSLWKRKADSTLRHCKTLVQFLEETLDAIPDSVLDAPVLMEPS 332
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 47/52 (90%)
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNL 104
P YLPP FSVAPMM+WTD+HYRTLARLIS+HAWLYTEM+ AETIV+Q+D L
Sbjct: 48 PGEYLPPLFSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDKL 99
>M0X4W7_HORVD (tr|M0X4W7) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 244
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/224 (66%), Positives = 178/224 (79%), Gaps = 18/224 (8%)
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
MSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+RKALL+G+SPA
Sbjct: 1 MSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHARKALLSGLSPA 60
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR++PPLKYEY+Y LLRDFP EV A+ GA+ VMVGRAAYNNPW+
Sbjct: 61 ENRTVPPLKYEYYYALLRDFP--------------EVSASIRQGAHRVMVGRAAYNNPWN 106
Query: 296 ILGHVDTVIYG-APSCSLTRRQVLEKYIVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAP 353
+LGHVD+ IYG A SCS +RRQ+LE Y VYGDS++G+YG RP VR +VKPLL+LFHS P
Sbjct: 107 MLGHVDSEIYGMATSCS-SRRQILESYQVYGDSIIGQYGISRPNVRQLVKPLLHLFHSEP 165
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVV-EPT 396
GN LWKR+AD+ RHC T+ F EETL AIPDSVLD+PV+ EP+
Sbjct: 166 GNSLWKRRADSTLRHCKTLAQFLEETLDAIPDSVLDAPVLREPS 209
>M0X4X6_HORVD (tr|M0X4X6) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 195
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/188 (72%), Positives = 164/188 (87%)
Query: 105 DRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVS 164
DRFLAF +QHPIVLQ+GGSN++ LAKATELA+ Y YDEINLNCGCPS KVAGHGCFG
Sbjct: 3 DRFLAFPAEQHPIVLQLGGSNLDNLAKATELASGYSYDEINLNCGCPSGKVAGHGCFGAR 62
Query: 165 LMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHS 224
LM DP+FV +AMSAIAAN +VPVSVKCRIGVDD DSY+ELC F+ KV S SPT+HFIIH+
Sbjct: 63 LMYDPEFVGDAMSAIAANCDVPVSVKCRIGVDDRDSYEELCTFVDKVVSKSPTRHFIIHA 122
Query: 225 RKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVM 284
RKALL+G+SPAENR++PPLKYEY+Y LLRDFP++ FT+NGG+T++++V A+ GA+ VM
Sbjct: 123 RKALLSGLSPAENRTVPPLKYEYYYALLRDFPEVHFTLNGGLTTIEQVSASIRQGAHRVM 182
Query: 285 VGRAAYNN 292
VGRAAYN
Sbjct: 183 VGRAAYNK 190
>M0SG42_MUSAM (tr|M0SG42) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 229
Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 137/190 (72%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
Query: 202 DELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFT 261
+ + +FI VSS SPTKHFIIH+RKALLNG+SPA NR +PPLKYEY++ LLRDFP++ FT
Sbjct: 3 EAISNFIHTVSSRSPTKHFIIHARKALLNGLSPAANRKVPPLKYEYYFALLRDFPEICFT 62
Query: 262 INGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKY 321
INGGIT +D+V AA GA GVMVGRAAYNNPW+ LGHVD+ +YGA S +L+RRQ+LE Y
Sbjct: 63 INGGITCIDQVTAALREGANGVMVGRAAYNNPWNTLGHVDSEVYGASSSNLSRRQILENY 122
Query: 322 IVYGDSVLGKYG-HRPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETL 380
+YGDS LGKYG ++P+VR +VKPLLNLFHS PGNGLWKRKAD A RHCTTIKSF EETL
Sbjct: 123 QMYGDSELGKYGPNKPSVRQMVKPLLNLFHSEPGNGLWKRKADTALRHCTTIKSFLEETL 182
Query: 381 VAIPDSVLDS 390
AIPD+VLDS
Sbjct: 183 DAIPDNVLDS 192
>K8YNP2_9STRA (tr|K8YNP2) Uncharacterized protein OS=Nannochloropsis gaditana
CCMP526 GN=NGA_0331800 PE=4 SV=1
Length = 437
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 221/336 (65%), Gaps = 8/336 (2%)
Query: 62 SVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAF-SPDQHPIVLQ 120
S+APMME+TD H R L RL+SK LYTEM+ A T+ + +++ DRFL F SP +HP+VLQ
Sbjct: 90 SLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQ 149
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ E+LA+A+ LA+ Y Y+ +NLNCGCPS +V+G GCFG +LM +P+ VAE +A++
Sbjct: 150 LGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMS 209
Query: 181 ANTN--VPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENR 238
+ +PV+VKCRIGVDD DSY++L F+ VS SP +HF++H+RKA+L G+SP +NR
Sbjct: 210 EGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNR 269
Query: 239 SIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILG 298
+PPLKY + Y L R+FP L FT+NGG+ S ++V G +GVM+GRA P++
Sbjct: 270 KVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFY-WS 328
Query: 299 HVDTVIYGAPSCS--LTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNG 356
VD ++G+ + LTRR+VL++Y Y + G R R ++KP+ NLF P
Sbjct: 329 DVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPR-MRRLLIKPVHNLFAGEPMGK 387
Query: 357 LWKRKADAAFRHCT-TIKSFFEETLVAIPDSVLDSP 391
++ D A + ++ E +P ++L+ P
Sbjct: 388 RFRATLDQALLEPSLDVRQVLERATAVMPAALLEVP 423
>F0W6D1_9STRA (tr|F0W6D1) tRNAdihydrouridine synthase putative OS=Albugo
laibachii Nc14 GN=AlNc14C24G2431 PE=4 SV=1
Length = 563
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 221/345 (64%), Gaps = 26/345 (7%)
Query: 67 MEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSNV 126
M+WTD HYR L RLI+ H LYTEML +T++YQ+DNL FL D+ P+ +Q+GG+++
Sbjct: 218 MDWTDRHYRYLMRLITHHTQLYTEMLVDQTLLYQKDNLHYFLGHDDDESPLAVQLGGNSI 277
Query: 127 EKLAKATELANAY-GYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSA-IAANTN 184
+ LA A +L Y G++EINLNCGCPSPKV+ CFG LML P+ V + + I AN++
Sbjct: 278 DTLAAAAQLCREYGGFNEINLNCGCPSPKVSKQ-CFGAQLMLQPERVRDICAGMIGANSS 336
Query: 185 V--PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPP 242
+ ++VKCRIGVDD DSY+EL FI V S S +HFI+H+RK L+G++P ENR+IP
Sbjct: 337 MDPEITVKCRIGVDDCDSYEELKRFI-SVVSASGVEHFIVHARKCWLSGLNPHENRTIPT 395
Query: 243 LKYEYFYGLLRDFPDLTFTINGGITSVDEVYA-AREAGAYGVMVGRAAYNNPWHILGHVD 301
L Y++ Y L DFP+L FT+NGG+ S++E + + + G+M+GRAAY PW+ + D
Sbjct: 396 LNYDFVYQLKSDFPNLAFTLNGGVASIEEAHRLLQTSNMDGIMIGRAAYKYPWN-FRNAD 454
Query: 302 TVIYGAPSC-SLTRRQVLEKYIVYGDSVLGKYGHRPTVRD---------IVKPLLNLFHS 351
++YGA +L+RR+++E+YI Y + + ++G + + +VKPLL+LF
Sbjct: 455 RLLYGAKRNPNLSRREIIERYIDYAEDLQERWGSDKILDNSKFAMPTTTLVKPLLSLFSG 514
Query: 352 APGNGLWKRKADAAFRHCTT------IKSFFEETLVAIPDSVLDS 390
G ++KRK + C ++ E + +PDS+LD+
Sbjct: 515 EHGGKVFKRKIGEFW--CINKEDRPGLREIVESAVRLLPDSMLDA 557
>M2XBM6_GALSU (tr|M2XBM6) tRNA-dihydrouridine synthase A OS=Galdieria sulphuraria
GN=Gasu_51470 PE=4 SV=1
Length = 406
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 200/332 (60%), Gaps = 6/332 (1%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQ-DNLDRFLAFSPDQHPIVL 119
FSVAPMM+ TD H+R LAR+ISKHA LYTEM+ I++ + R L F Q P+ L
Sbjct: 57 FSVAPMMDVTDKHFRNLARMISKHAVLYTEMIVDNVIIHSDGEKRRRILDFDSAQRPLCL 116
Query: 120 QIGGSNVEKLAKATELANAY-GYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSA 178
QIGGS+ K++KA +A+ Y YD+ NLNCGCPS KV+ GCFG LM P+ VA S
Sbjct: 117 QIGGSDPSKVSKAVHIAHKYFRYDDYNLNCGCPSDKVSSQGCFGAILMKQPEKVARITSR 176
Query: 179 IAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENR 238
+A P++VKCRIGVD HDSY+ L +FI VS+ HFIIH+R A L+G+SP ENR
Sbjct: 177 VAETVGKPMTVKCRIGVDHHDSYEFLSNFIHVVSTSGHVNHFIIHARSAWLSGLSPKENR 236
Query: 239 SIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILG 298
S PP+KYEY Y L +DFP L FT+NG ++++ +V G GVM+GRA PW+ L
Sbjct: 237 SKPPIKYEYVYRLTKDFPHLKFTLNGQVSTLSDVVMHLSKGVEGVMLGRAVMERPWNSLR 296
Query: 299 HVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLW 358
VD +IY S + R+ V++KY+ + + +Y + +VKP+L LF ++
Sbjct: 297 LVDCIIYNDFSTLIRRKYVVQKYLEH----IAQYEGHASRYLLVKPVLQLFAGEMNCRIF 352
Query: 359 KRKADAAFRHCTTIKSFFEETLVAIPDSVLDS 390
+ + + + L +P SVL+
Sbjct: 353 RARCGECLQQGHSASDSIRYALNILPQSVLEQ 384
>D0NZC8_PHYIT (tr|D0NZC8) tRNA-dihydrouridine synthase OS=Phytophthora infestans
(strain T30-4) GN=PITG_18868 PE=3 SV=1
Length = 379
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 223/367 (60%), Gaps = 37/367 (10%)
Query: 57 LPP--WFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQ 114
LPP SVAPMM+WTD HYR + R+I+K L+TEM+ +T++YQ+ NLD FL P +
Sbjct: 4 LPPVARLSVAPMMDWTDRHYRFMMRMITKKTLLFTEMVVDQTLLYQRKNLDYFLGHDPAE 63
Query: 115 HPIVLQIGGSNVEKLAKATELANAY-GYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVA 173
P+ LQ+GG++VE L A L+ +Y G+ EINLN GCPS V+ CFG LML+P+ V
Sbjct: 64 APLALQLGGNSVEDLGAAAHLSQSYGGFCEINLNTGCPSALVSSR-CFGARLMLEPERVR 122
Query: 174 EAMS------AIAANTN-----VPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
+ A+A+ N V+VKCRIGVDD DSYDEL ++ V+S + +H I+
Sbjct: 123 DICDSMRHSVALASEGNPDHPTAEVTVKCRIGVDDCDSYDELHHYVAAVAS-AGVRHIIV 181
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAARE----A 278
H+RK LL G+S +NR+IPPL+YE Y L +DFP+L+FT+NGG+ S+ ARE
Sbjct: 182 HARKCLLKGLSTKDNRTIPPLRYEVVYRLKQDFPELSFTLNGGVKSIQH---ARELLNTT 238
Query: 279 GAYGVMVGRAAYNNPWHILGHVDTVIYGAP-SCSLTRRQVLEKYIVYGDSVLGKYGHRPT 337
G+M+GRAAYN PW+ D +I+ A + +L+RR+++E+Y+ Y + + K+G
Sbjct: 239 NVDGIMIGRAAYNTPWN-FRDADRLIFNAERNPNLSRREIIERYLEYAEDLQAKWGSTEP 297
Query: 338 VRD---------IVKPLLNLFHSAPGNGLWKRKADAAFRHCT---TIKSFFEETLVAIPD 385
+ D ++KPLL+LF+ G +KR+ A + ++ E + +P
Sbjct: 298 LSDSPYTMATSALMKPLLSLFNGEFGGKAFKREISAQWSKKGPRPELREMIESAMKVLPS 357
Query: 386 SVLDSPV 392
V+D+ V
Sbjct: 358 EVVDARV 364
>G4ZWL3_PHYSP (tr|G4ZWL3) tRNA-dihydrouridine synthase OS=Phytophthora sojae
(strain P6497) GN=PHYSODRAFT_336192 PE=3 SV=1
Length = 379
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 223/367 (60%), Gaps = 37/367 (10%)
Query: 57 LPP--WFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQ 114
LPP SVAPMM+WTD HYR + R+I+K L+TEM+ +T+++Q+ NLD FL P +
Sbjct: 4 LPPVARLSVAPMMDWTDRHYRFMMRMITKETLLFTEMVVDQTLLHQKKNLDYFLGHDPIE 63
Query: 115 HPIVLQIGGSNVEKLAKATELANAY-GYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVA 173
P+ LQ+GG++VE L A L+ +Y G+ EINLN GCPS V+ CFG LML+P+ V
Sbjct: 64 APLALQLGGNSVEDLGAAAHLSQSYGGFCEINLNTGCPSALVSSR-CFGARLMLEPERVR 122
Query: 174 EAMS------AIAANTN-----VPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
+ + A+AA N V+VKCRIGVDD DSY+EL ++ V+ + +H I+
Sbjct: 123 DICASMRRNVALAAEENPDRPAAEVTVKCRIGVDDCDSYEELHHYVSSVTE-AGVRHIIV 181
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAARE----A 278
H+RK LL G+S +NR+IPPL+Y+ Y L +DFP+L+FT+NGG+ S+ ARE
Sbjct: 182 HARKCLLKGLSTKDNRTIPPLRYDVVYRLKQDFPELSFTLNGGVQSIQH---ARELLDTT 238
Query: 279 GAYGVMVGRAAYNNPWHILGHVDTVIYGAP-SCSLTRRQVLEKYIVYGDSVLGKYGHRPT 337
GVM+GRAAYN PW+ D +I+ A + +L+RR+++ +Y+ Y + + K+G
Sbjct: 239 NVDGVMIGRAAYNTPWN-FRDADRLIFNAERNPNLSRREIIARYLDYAEGLQAKWGSTEP 297
Query: 338 VRD---------IVKPLLNLFHSAPGNGLWKRKADAAFRHCT---TIKSFFEETLVAIPD 385
+ D ++KPLL+LF+ G +KR+ A + ++ E + +PD
Sbjct: 298 LSDSPYTMATSALMKPLLSLFNGEFGGKAFKREISAQWAKKGPRPELREMIESAMKVLPD 357
Query: 386 SVLDSPV 392
VLD+ V
Sbjct: 358 EVLDARV 364
>A1SA51_SHEAM (tr|A1SA51) tRNA-dihydrouridine synthase OS=Shewanella amazonensis
(strain ATCC BAA-1098 / SB2B) GN=Sama_3055 PE=3 SV=1
Length = 326
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 194/300 (64%), Gaps = 10/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD HYR ARL+SK A LYTEM+ I++ + + +LA++ ++HP+ LQ
Sbjct: 9 FSVAPMLDWTDRHYRYFARLMSKEALLYTEMVTTGAILHGKGD---YLAYNQEEHPLALQ 65
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA +LA A GYDE+N+N GCPS +V +G FG LM +PK VAE + A+
Sbjct: 66 LGGSDPKDLATCAKLAEARGYDEVNINVGCPSDRVQ-NGRFGACLMAEPKLVAECVDAMR 124
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+VPV+VK RIG+D+ DSY L DF+ VS+ + FIIH+RKA L G+SP ENR I
Sbjct: 125 QQVSVPVTVKTRIGIDEQDSYGFLTDFVETVSA-AGCDTFIIHARKAWLQGLSPKENREI 183
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL YE Y L RD+P L+ +INGG+TS+++ A GVMVGR AY NP+ IL V
Sbjct: 184 PPLDYERVYQLKRDYPQLSISINGGVTSIEQA-KTHLAQLDGVMVGREAYQNPY-ILASV 241
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
DT + G P+ +R +V+ K + Y L G + I + ++ L+ PG+ W+R
Sbjct: 242 DTELCGKPAVVSSREEVIGKLLPYIGKHLADGGR---LNHISRHIIGLYQGLPGSRAWRR 298
>B2T3K2_BURPP (tr|B2T3K2) tRNA-dihydrouridine synthase OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=Bphyt_1755
PE=3 SV=1
Length = 333
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 199/328 (60%), Gaps = 13/328 (3%)
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP 112
P+ P SVAPMM+WTD H R+L R+IS+H WLYTEM+ +++ ++ R LAF+P
Sbjct: 4 PHTPSPRRVSVAPMMDWTDRHCRSLHRVISRHTWLYTEMVTTGALLH--GDVPRHLAFTP 61
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
++ P+ LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ V
Sbjct: 62 EEAPVALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 120
Query: 173 AEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGI 232
A+ + A+ +VPV+VK RIGVD + Y + DF+ ++ + FI+H+R A+L G+
Sbjct: 121 ADCVKAMRDAVSVPVTVKHRIGVDAVEEYGFVRDFVGTIAE-AGCNVFIVHARNAILKGL 179
Query: 233 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
SP ENR IPPLKYEY Y L RDFP L INGGI ++DEV A E GVM+GR AY+N
Sbjct: 180 SPKENREIPPLKYEYAYQLKRDFPQLEIIINGGIKTLDEVEAHLEH-VDGVMLGREAYHN 238
Query: 293 PWHILGHVDTVIYGAPSCSLTRRQVLEKYIVY--GDSVLGKYGHRPTVRDIVKPLLNLFH 350
P+ +L VD YGA LTR QV K I Y + V G Y + I + L L+
Sbjct: 239 PY-VLADVDARFYGAAQTPLTREQVEAKLIEYCAAEMVRGTY-----LGAITRHALGLYR 292
Query: 351 SAPGNGLWKRKADAAFRHCTTIKSFFEE 378
G W+R + R + F+E
Sbjct: 293 GEAGARGWRRVLSDSKRLAARDLTIFDE 320
>F2K1D2_MARM1 (tr|F2K1D2) tRNA-dihydrouridine synthase OS=Marinomonas
mediterranea (strain ATCC 700492 / JCM 21426 / NBRC
103028 / MMB-1) GN=Marme_1807 PE=3 SV=1
Length = 348
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 190/300 (63%), Gaps = 8/300 (2%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WT YR AR ++KH LYTEM+ I+ Q DN +RFL + +HPI LQ
Sbjct: 24 FSVAPMLDWTTRDYRVFARTLTKHTLLYTEMVTTGAIL-QGDNPERFLKYDDCEHPIALQ 82
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA ++A + YDE+NLN GCPS +V + G LM P VA+ + A+
Sbjct: 83 LGGSDAVALATCAKIAETFHYDEVNLNVGCPSDRVQ-NSLIGACLMAYPDKVADILKAMQ 141
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
T++PV++K RIG+DD Y L DF+ V+ + + FI+H+R A+L G+SP ENR I
Sbjct: 142 DATSIPVTIKHRIGLDDQQEYSILRDFVGTVAD-TGIQTFIVHARNAILQGLSPKENREI 200
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPLKY+Y Y L +DFPDL INGGI ++DE + + GVM+GR AYNNPW IL +
Sbjct: 201 PPLKYDYVYQLKKDFPDLEIIINGGIKTIDETISHLDH-VDGVMMGREAYNNPW-ILSDI 258
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
DT +YGA +C R + LE+++ Y + L K G R + + + +L +FH PG ++R
Sbjct: 259 DTKVYGASACVNNRFEALERFVPYVEEQLAK-GER--LMHMTRHILGIFHGLPGGKQFRR 315
>K4KRQ4_SIMAS (tr|K4KRQ4) tRNA-dihydrouridine synthase OS=Simiduia agarivorans
(strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)
GN=M5M_18525 PE=3 SV=1
Length = 325
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 194/303 (64%), Gaps = 9/303 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P FS+APMMEW+D H R RL+SK A+LYTEM+ +++ + +RFL ++P++HP+
Sbjct: 5 PRAFSLAPMMEWSDRHCRYFWRLLSKQAFLYTEMVTTGALIH--GDRERFLNYNPEEHPV 62
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGSN ++LA ++A ++GYDE+NLNCGCPS +V +G G LM P+ VA+ +
Sbjct: 63 ALQLGGSNPQELAACAQMAESWGYDEVNLNCGCPSDRVQ-NGMIGACLMAQPQLVADCIK 121
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ +PV+VK RIG+DD D L DF+ +++ FI+H+RKA L G+SP EN
Sbjct: 122 AMQDAVQIPVTVKHRIGIDDMDDDQGLLDFVAPIAATGCVT-FIVHARKAWLKGLSPKEN 180
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPL Y+ + L ++FPDL INGG+ ++ + A+ A GVMVGR AY+NPW +L
Sbjct: 181 REIPPLNYDRVHKLKQEFPDLEIIINGGLKTLADC-QAQLAHVDGVMVGREAYHNPW-LL 238
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VD IYG P ++ R V+++ + Y D L G R + I + LL LFH PG
Sbjct: 239 SEVDAAIYGQPPVTIDRLAVIDQMMGYIDKQLSA-GMR--LHHITRHLLGLFHGQPGGKQ 295
Query: 358 WKR 360
++R
Sbjct: 296 FRR 298
>L1IC54_GUITH (tr|L1IC54) tRNA-dihydrouridine synthase OS=Guillardia theta
CCMP2712 GN=GUITHDRAFT_81327 PE=3 SV=1
Length = 317
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 186/305 (60%), Gaps = 12/305 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
VAPMM+WTD + R RLISK+ W+Y+EM+ I+ N DR L F P +HPI LQ
Sbjct: 17 LCVAPMMDWTDRYDRYFLRLISKNTWMYSEMVTTSAIL--NGNQDRLLGFFPQEHPIALQ 74
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ E LAK ++ +YGYDEINLN GCPS +V+ G FG LM +P+ V + ++A+
Sbjct: 75 LGGSDPEDLAKCAKVGESYGYDEINLNVGCPSERVST-GSFGACLMAEPELVRDCVAAMR 133
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+ VPV+VK RIG+D DSYD LC F+ V K FI+H+RKA+L G+SP ENR I
Sbjct: 134 ESVKVPVTVKHRIGIDHLDSYDLLCKFVSTVEE-GGCKTFIVHARKAILKGLSPKENREI 192
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEV-----YAAREAGAYGVMVGRAAYNNPWH 295
PPL+Y + L +DFP L INGGIT + + A R G GVM+GR+AY+ P+
Sbjct: 193 PPLQYHVVHQLKQDFPQLEIIINGGITDLSQARAHLEQAGRAGGMDGVMIGRSAYHEPYK 252
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGN 355
IL D IY +T Q++E+ + + D L K G ++ I + + LFH PG
Sbjct: 253 ILSRADMEIYNDEGGGVTYFQIIEEMLPFIDEQL-KAG--VSLNSITRHMQGLFHGCPGG 309
Query: 356 GLWKR 360
++R
Sbjct: 310 RAFRR 314
>E1T673_BURSG (tr|E1T673) tRNA-dihydrouridine synthase OS=Burkholderia sp.
(strain CCGE1003) GN=BC1003_1472 PE=3 SV=1
Length = 333
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 196/322 (60%), Gaps = 9/322 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+L R+IS+H WLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSLHRMISRHTWLYTEMVTTGALLH--GDVPRHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ VPV+VK RIGVD + Y + DF+ ++ + + FI+H+R A+L G+SP EN
Sbjct: 126 AMRDAVGVPVTVKHRIGVDAVEDYSFVRDFVGTIAE-AGCEVFIVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP L INGGI ++DEV A + GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQLEIVINGGIKTLDEVEAHLQH-VDGVMLGREAYHNPY-LL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VD YG+ LTR QV K I Y + + + + I + L L+ G
Sbjct: 243 ADVDARFYGSAEAPLTREQVEAKLIEYCGVEMARGTY---LGAITRHALGLYRGEAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEET 379
W+R + R + F+E
Sbjct: 300 WRRVLSDSKRLAARDLAIFDEA 321
>G8M8J0_9BURK (tr|G8M8J0) tRNA-dihydrouridine synthase OS=Burkholderia sp. YI23
GN=BYI23_A011350 PE=3 SV=1
Length = 334
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 201/330 (60%), Gaps = 9/330 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+L RL+S+HAWLYTEM+ ++Y ++ R LAF+P + P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSLHRLVSRHAWLYTEMVTTGALLY--GDVARHLAFTPAEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LAK+ +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAKSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMKEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y+ + DF+ ++ + + FI+H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDTVEDYEFVRDFVGTIAD-AGCEVFIVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKYEY Y L RDFP L +INGGI ++DEV + GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYEYAYRLKRDFPHLEISINGGIKTLDEVEEHLKH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VDT YGA + +R + + I Y L + + V + L L+ PG
Sbjct: 243 AGVDTRFYGADTPVPSREAIEAELIDYARHELARGTYLGAV---TRHALGLYRGVPGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIPDSV 387
W+R + R T F+E + ++V
Sbjct: 300 WRRVLSDSRRLATGDLGIFDEARGHLREAV 329
>F7RRS5_9GAMM (tr|F7RRS5) tRNA-dihydrouridine synthase OS=Shewanella sp. HN-41
GN=SOHN41_03063 PE=3 SV=1
Length = 339
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 198/317 (62%), Gaps = 10/317 (3%)
Query: 44 QQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDN 103
+ H K P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ + +
Sbjct: 4 ENHHLKPCAPTKLLDRTFSIAPMLDWTDRHYRYFARLMSTNALLYTEMVTTGAILHGRGD 63
Query: 104 LDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGV 163
+LA++ ++HP+ LQ+GGSN +LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 64 ---YLAYNQEEHPLALQLGGSNPSELARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGA 119
Query: 164 SLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIH 223
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY+ L FI V + FIIH
Sbjct: 120 CLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTHFIDTVMA-KGCGEFIIH 178
Query: 224 SRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGV 283
+RKA L+G+SP ENR IPPL Y+ Y L RD+P L +INGGITS+++ + GV
Sbjct: 179 ARKAWLSGLSPKENREIPPLDYDRAYQLKRDYPTLNISINGGITSLEQAKTHLQH-LDGV 237
Query: 284 MVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVK 343
M+GR AY NP+ IL VD ++ G+P ++R V+E + Y ++ L G + I +
Sbjct: 238 MMGREAYQNPY-ILAQVDQMLCGSPKAVISREAVIETMLPYIEAHLQSGGR---LNHITR 293
Query: 344 PLLNLFHSAPGNGLWKR 360
++ LF PG W+R
Sbjct: 294 HMIGLFQGLPGARAWRR 310
>C5AGQ2_BURGB (tr|C5AGQ2) tRNA-dihydrouridine synthase OS=Burkholderia glumae
(strain BGR1) GN=bglu_1g18850 PE=3 SV=1
Length = 336
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 190/299 (63%), Gaps = 9/299 (3%)
Query: 62 SVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQI 121
SVAPMM+WTD H R+L R IS+H WLYTEM+ +++ ++ R LAF+PD+ P+ LQ+
Sbjct: 16 SVAPMMDWTDRHCRSLHRTISRHTWLYTEMVTTGALMH--GDVARHLAFTPDEAPVALQL 73
Query: 122 GGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAA 181
GGS + LAK+ L +GYDEINLNCGCPS +V G FG LM +P VA+ + A+
Sbjct: 74 GGSEPDDLAKSARLGENWGYDEINLNCGCPSERVQ-RGAFGACLMNEPGLVADCVKAMRD 132
Query: 182 NTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIP 241
+VPV+VK RIGVD + Y + DF+ V+ + FI+H+R A+L G+SP ENR IP
Sbjct: 133 AVSVPVTVKHRIGVDAVEEYAFVRDFVGTVAQ-AGCDVFIVHARNAILKGLSPKENREIP 191
Query: 242 PLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVD 301
PLKY+Y Y L +DFPDL INGGIT++DEV A + GVM+GR AY+NP+ +L VD
Sbjct: 192 PLKYDYAYRLKQDFPDLEIIINGGITTLDEVEAHLQH-VDGVMLGREAYHNPF-VLAEVD 249
Query: 302 TVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
YGA + + TR ++ E+ I Y + + + IV+ L L+ G W+R
Sbjct: 250 RRFYGAAAAAPTREEIEERLIAY---CVAEIARGTYLGAIVRHALGLYRGVHGARGWRR 305
>B0SLP0_LEPBP (tr|B0SLP0) tRNA-dihydrouridine synthase OS=Leptospira biflexa
serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)
GN=dusA PE=3 SV=1
Length = 323
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 196/320 (61%), Gaps = 8/320 (2%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMM+WTD H+R RLISKHA LYTEM+ I+ +DN R+L FS ++HPI LQ
Sbjct: 10 ISVAPMMDWTDRHFRYFIRLISKHALLYTEMVTTGAILRGKDN-HRYLDFSKEEHPIALQ 68
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GG + + LA+ ++ YGYDEINLN GCPS +V G FG LM +P VAE ++
Sbjct: 69 LGGDSPKALAECAKIGEDYGYDEINLNVGCPSDRVQS-GSFGACLMKEPDLVAEMVAFCK 127
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+ +PV+VK RIGV+ +SY++L F+ K+ + H I+H+R A+L G+SP ENR+I
Sbjct: 128 SKVKIPVTVKHRIGVNGKESYEDLHQFVSKIQK-AGVDHCIVHARIAILEGLSPKENRTI 186
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+YE Y L DFP+L TINGGI + E+ A GVMVGRAAY+NP+ + V
Sbjct: 187 PPLRYEDVYRLKSDFPNLPITINGGIKTHAEI-KTHLTKADGVMVGRAAYDNPF-LFADV 244
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D++ +G+ ++TR +L+K I Y SV G V I++ +L L+H G ++R
Sbjct: 245 DSLYFGSKEGTITRESILQKMIPYVQSVRMSGG---KVSHILRHILGLYHGEKGAREFRR 301
Query: 361 KADAAFRHCTTIKSFFEETL 380
+ +S E L
Sbjct: 302 YFTNGMHLTSATESILESYL 321
>B0SDG8_LEPBA (tr|B0SDG8) tRNA-dihydrouridine synthase OS=Leptospira biflexa
serovar Patoc (strain Patoc 1 / Ames) GN=LBF_2465 PE=3
SV=1
Length = 323
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 196/320 (61%), Gaps = 8/320 (2%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMM+WTD H+R RLISKHA LYTEM+ I+ +DN R+L FS ++HPI LQ
Sbjct: 10 ISVAPMMDWTDRHFRYFIRLISKHALLYTEMVTTGAILRGKDN-HRYLDFSKEEHPIALQ 68
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GG + + LA+ ++ YGYDEINLN GCPS +V G FG LM +P VAE ++
Sbjct: 69 LGGDSPKALAECAKIGEDYGYDEINLNVGCPSDRVQS-GSFGACLMKEPDLVAEMVAFCK 127
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+ +PV+VK RIGV+ +SY++L F+ K+ + H I+H+R A+L G+SP ENR+I
Sbjct: 128 SKVKIPVTVKHRIGVNGKESYEDLHQFVSKIQK-AGVDHCIVHARIAILEGLSPKENRTI 186
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+YE Y L DFP+L TINGGI + E+ A GVMVGRAAY+NP+ + V
Sbjct: 187 PPLRYEDVYRLKSDFPNLPITINGGIKTHAEI-KTHLTKADGVMVGRAAYDNPF-LFADV 244
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D++ +G+ ++TR +L+K I Y SV G V I++ +L L+H G ++R
Sbjct: 245 DSLYFGSKEGTITRESILQKMIPYVQSVRMSGG---KVSHILRHILGLYHGEKGAREFRR 301
Query: 361 KADAAFRHCTTIKSFFEETL 380
+ +S E L
Sbjct: 302 YFTNGMHLTSATESILESYL 321
>Q07XT7_SHEFN (tr|Q07XT7) tRNA-dihydrouridine synthase OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_3341 PE=3 SV=1
Length = 349
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 194/312 (62%), Gaps = 10/312 (3%)
Query: 49 KGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFL 108
K V+P L FS+APM++WTD HYR ARL+S A LYTEM+ I+ + + +L
Sbjct: 12 KLVIPTDTLDRTFSIAPMLDWTDRHYRYFARLMSSKALLYTEMITTGAILQGKGD---YL 68
Query: 109 AFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLD 168
A++ +HP+ LQ+GGSN LA +LA GYDE+NLN GCPS +V +G FG LM +
Sbjct: 69 AYNEQEHPVALQLGGSNAVDLAACAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAE 127
Query: 169 PKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKAL 228
P VA+ + A+ T++P++VK RIG+D+ DSY L DFI VS+ + F IH+RKA
Sbjct: 128 PALVAQCVDAMKQVTDIPITVKTRIGIDEQDSYQFLTDFIETVSAQGCSA-FTIHARKAW 186
Query: 229 LNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRA 288
L G+SP ENR IPPL Y+ Y L RD+ L +INGGI +++E A GVMVGR
Sbjct: 187 LQGLSPKENREIPPLDYDRVYQLKRDYQHLNISINGGIKTLEE-SKLHLALLDGVMVGRE 245
Query: 289 AYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNL 348
AY NP+ IL VD + G + +TR+QV+E+ + Y ++ L + G + I + ++ L
Sbjct: 246 AYQNPY-ILAQVDQQLCGLDTAVITRQQVIEQMLPYIEAHLAQGGR---LNHITRHMIGL 301
Query: 349 FHSAPGNGLWKR 360
F PG+ W+R
Sbjct: 302 FQGLPGSRGWRR 313
>J3BND3_9BURK (tr|J3BND3) tRNA-dihydrouridine synthase OS=Burkholderia sp. BT03
GN=PMI06_03518 PE=3 SV=1
Length = 333
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 191/303 (63%), Gaps = 9/303 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R +S+H WLYTEM+ +++ +++R LAF+ D+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTLSRHTWLYTEMVTTGALIH--GDVERHLAFTADEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMKEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ +VPV+VK RIGVDD D Y + DF+ ++ + + FI+H+R A+L G+SP EN
Sbjct: 126 AMRDVVSVPVTVKHRIGVDDVDDYAFVRDFVGTIAE-AGCEVFIVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP L INGGI ++DEV A + GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQLEIIINGGIKTLDEVEAHLQH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VD YG+ + TR + K I Y + L + G P IV+ L L+ G
Sbjct: 243 ADVDARFYGSTDAAPTREEAEAKLIEYCRAELAR-GTYPGA--IVRHALGLYRGVAGARG 299
Query: 358 WKR 360
W+R
Sbjct: 300 WRR 302
>R9AEM5_9LEPT (tr|R9AEM5) tRNA dihydrouridine synthase A OS=Leptospira wolbachii
serovar Codice str. CDC GN=dusA PE=4 SV=1
Length = 324
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 189/300 (63%), Gaps = 8/300 (2%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMM+WTD HYR RLISKH LYTEM+ I+ +DN R+L +S ++HP+ LQ
Sbjct: 10 ISVAPMMDWTDRHYRFFLRLISKHTLLYTEMVTTGAILRGKDN-HRYLEYSKEEHPVALQ 68
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GG + LA+ ++ YGYDEINLN GCPS +V G FG LM +P VAE ++A
Sbjct: 69 LGGDSPTALAECAKIGEDYGYDEINLNVGCPSDRVQS-GSFGACLMKEPDLVAEMVTACK 127
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+ +PV+VK RIGV+ +SY++L F+ K+ S + I+H+R A+L G+SP ENR+I
Sbjct: 128 SQVKIPVTVKHRIGVNGKESYEDLHHFVSKIRS-AGVDQIIVHARIAILEGLSPKENRTI 186
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+YE Y L +DFPDL INGGI + +EV GVM+GRAAY+NP+ + V
Sbjct: 187 PPLRYEDVYSLKKDFPDLPIVINGGIKTHEEV-EQHLTKVDGVMIGRAAYDNPF-LFSEV 244
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D++ Y + TR +VL + I Y SVL K G V I++ +L L+H G +++
Sbjct: 245 DSLYYDSKDSVRTREEVLSELIPYVHSVLEKEG---KVHYILRHILGLYHGERGAREYRK 301
>Q3J6Z4_NITOC (tr|Q3J6Z4) tRNA-dihydrouridine synthase OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=Noc_2960 PE=3 SV=1
Length = 337
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 191/302 (63%), Gaps = 13/302 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMMEWTD H R RLIS A LYTEM+ A +++ N RFLA+ +HP+ LQ
Sbjct: 22 ISVAPMMEWTDRHCRYFLRLISHRALLYTEMVTAGALIH--GNRARFLAYHKSEHPLALQ 79
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ E+LA ++A YG+DE+NLN GCPS +V G FG LM +P+ VAE ++A+A
Sbjct: 80 LGGSHPEELALCAQMAEDYGFDEVNLNVGCPSNRVQS-GRFGACLMAEPELVAECVAAMA 138
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
T +PV+VK RIG+D+ DSY+ L FI V+ + + FIIH+RKA L G+SP ENR
Sbjct: 139 QATQIPVTVKTRIGIDEQDSYEALDHFISTVAQ-AGCRTFIIHARKAWLQGLSPKENREK 197
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+Y+ + +DFP LT INGGIT+++E+ E GVM+GRAAY+NP+ +L V
Sbjct: 198 PPLRYDVVRTIKQDFPQLTVIINGGITTLEEISEHLEL-LDGVMIGRAAYHNPY-LLAQV 255
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVY--GDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLW 358
D YG LTR +++E ++ Y V G Y + + + +L LF PG W
Sbjct: 256 DRNFYGDFHPFLTRHEIIEAFLPYVAEQLVQGVY-----LNHMTRHILGLFQGQPGARAW 310
Query: 359 KR 360
+R
Sbjct: 311 RR 312
>B6C5N2_9GAMM (tr|B6C5N2) tRNA-dihydrouridine synthase OS=Nitrosococcus oceani
AFC27 GN=NOC27_2254 PE=3 SV=1
Length = 337
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 191/302 (63%), Gaps = 13/302 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMMEWTD H R RLIS A LYTEM+ A +++ N RFLA+ +HP+ LQ
Sbjct: 22 ISVAPMMEWTDRHCRYFLRLISHRALLYTEMVTAGALIH--GNRARFLAYHKSEHPLALQ 79
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ E+LA ++A YG+DE+NLN GCPS +V G FG LM +P+ VAE ++A+A
Sbjct: 80 LGGSHPEELALCAQMAEDYGFDEVNLNVGCPSNRVQS-GRFGACLMAEPELVAECVAAMA 138
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
T +PV+VK RIG+D+ DSY+ L FI V+ + + FIIH+RKA L G+SP ENR
Sbjct: 139 QATQIPVTVKTRIGIDEQDSYEALDHFISTVAQ-AGCRTFIIHARKAWLQGLSPKENREK 197
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+Y+ + +DFP LT INGGIT+++E+ E GVM+GRAAY+NP+ +L V
Sbjct: 198 PPLRYDVVRTIKQDFPQLTVIINGGITTLEEISEHLEL-LDGVMIGRAAYHNPY-LLAQV 255
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVY--GDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLW 358
D YG LTR +++E ++ Y V G Y + + + +L LF PG W
Sbjct: 256 DRNFYGDFHPFLTRHEIIEAFLPYVAEQLVQGVY-----LNHMTRHILGLFQGQPGARAW 310
Query: 359 KR 360
+R
Sbjct: 311 RR 312
>L4K182_ECOLX (tr|L4K182) tRNA-dihydrouridine synthase OS=Escherichia coli KTE154
GN=A317_02144 PE=3 SV=1
Length = 345
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/320 (45%), Positives = 195/320 (60%), Gaps = 16/320 (5%)
Query: 44 QQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDN 103
Q S ++G P Y P FS+APM++WTD H R RL+S++ LYTEM+ I++ + +
Sbjct: 12 QNSVNRGKTPGYS-PSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD 70
Query: 104 LDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGV 163
+LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG
Sbjct: 71 ---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGA 126
Query: 164 SLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIH 223
LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + FIIH
Sbjct: 127 CLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIH 186
Query: 224 SRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGV 283
+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A + GV
Sbjct: 187 ARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGV 245
Query: 284 MVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRD 340
MVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 246 MVGREAYQNPG-ILAAVDREIFGSSDIDADPVAVVRAMYPYIERELSQGTYLGH------ 298
Query: 341 IVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ITRHMLGLFQGIPGARQWRR 318
>E8YF68_9BURK (tr|E8YF68) tRNA-dihydrouridine synthase OS=Burkholderia sp.
CCGE1001 GN=BC1001_1876 PE=3 SV=1
Length = 333
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 196/322 (60%), Gaps = 9/322 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+L R+IS+H WLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSLHRMISRHTWLYTEMVTTGALLH--GDVPRHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPHDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ +VPV+VK RIGVD + Y + DF+ ++ + + FI+H+R A+L G+SP EN
Sbjct: 126 AMRDVVSVPVTVKHRIGVDAVEDYSFVRDFVGTIAQ-AGCEVFIVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP L INGGI ++DEV + GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQLEIVINGGIKTLDEVETHLQH-VDGVMLGREAYHNPY-LL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VD YG+ LTR QV K + Y + + + + + I + L L+ G
Sbjct: 243 ADVDARFYGSSEAPLTREQVEAKLVEYCAAEMARGTY---LGAITRHALGLYRGEAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEET 379
W+R + R + F+E
Sbjct: 300 WRRVLSDSKRLAARDLAIFDEA 321
>D3RRS7_ALLVD (tr|D3RRS7) tRNA-dihydrouridine synthase (Precursor)
OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 /
NBRC 103801 / D) GN=Alvin_1042 PE=3 SV=1
Length = 310
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/298 (45%), Positives = 187/298 (62%), Gaps = 13/298 (4%)
Query: 66 MMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSN 125
M++WTD H R RLIS+H LYTEM+ +++ + +RFL + P +HP+ LQ+GGS+
Sbjct: 1 MLDWTDRHCRYFLRLISRHTLLYTEMITTGALIH--GDRERFLRYDPAEHPVALQLGGSD 58
Query: 126 VEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNV 185
E LA+ +A +GYDEINLN GCPS +V +G FG LM +P VAE ++A+ A V
Sbjct: 59 SEDLARCARMAEEWGYDEINLNVGCPSDRVQ-NGRFGACLMAEPVLVAECVTAMRAAVRV 117
Query: 186 PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKY 245
PV+VK RIG+D+ DSY EL DF+ ++S + I+H+RKA L G+SP ENR IPPL+Y
Sbjct: 118 PVTVKHRIGIDERDSYAELVDFVGRLSE-AGCDAIIVHARKAWLKGLSPKENRDIPPLRY 176
Query: 246 EYFYGLLRDFPDLTFTINGGITSVDEVYAARE--AGAYGVMVGRAAYNNPWHILGHVDTV 303
E L RDFP L INGGI ++D AA + + GVM+GRAAY+NPW IL D
Sbjct: 177 EIVRDLKRDFPQLPIVINGGIETLD---AAVDFLSDLDGVMIGRAAYHNPW-ILAEADRR 232
Query: 304 IYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKRK 361
++G + TRRQVLE +I Y + L + + + LL LF PG W+R+
Sbjct: 233 VFGDTHPAPTRRQVLEAFIPYAERQLAAG---VPLNAMSRHLLGLFQGQPGARAWRRR 287
>I5CME8_9BURK (tr|I5CME8) tRNA-dihydrouridine synthase OS=Burkholderia terrae
BS001 GN=WQE_30845 PE=3 SV=1
Length = 333
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 191/303 (63%), Gaps = 9/303 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R +S+H WLYTEM+ +++ +++R LAF+ D+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTLSRHTWLYTEMVTTGALIH--GDVERHLAFTADEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMKEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ +VPV+VK RIGVDD + Y + DF+ ++ + + FI+H+R A+L G+SP EN
Sbjct: 126 AMRDAVSVPVTVKHRIGVDDVEDYAFVRDFVGTIAE-AGCEVFIVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP L INGGI ++DEV A + GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQLEIIINGGIKTLDEVEAHLQH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VD YG+ + TR + K I Y + L + G P IV+ L L+ G
Sbjct: 243 ADVDARFYGSTDAAPTREEAEAKLIEYCRAELAR-GTYPGA--IVRHALGLYRGVAGARG 299
Query: 358 WKR 360
W+R
Sbjct: 300 WRR 302
>D5BVC5_NITHN (tr|D5BVC5) tRNA-dihydrouridine synthase OS=Nitrosococcus
halophilus (strain Nc4) GN=Nhal_0359 PE=3 SV=1
Length = 340
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 192/309 (62%), Gaps = 17/309 (5%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
YL S+APMMEWTD H R RLIS HA LYTEM+ +++ + +RFLA+ P +H
Sbjct: 17 YLSRRVSIAPMMEWTDRHCRYFLRLISHHALLYTEMVTTGALIH--GDRERFLAYHPTEH 74
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
P+ +Q+GGSN E+LA LA +G+DE+NLN GCPS +V G FG LM++P+ VAE
Sbjct: 75 PLAVQLGGSNPEELAFCARLAEDHGFDEVNLNVGCPSDRVQS-GRFGACLMMEPELVAEC 133
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
++A+A +PV+VK RIGVD+ DSY+ L FI VS + + FI+H+RKA L G+SP
Sbjct: 134 VAAMAQTVQLPVTVKTRIGVDEQDSYEALTRFINTVSQ-AGCRTFILHARKAWLQGLSPK 192
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY--GVMVGRAAYNNP 293
ENR PPL+YE + +DFP L INGGI +++E A+E G+M+GRAAY+NP
Sbjct: 193 ENREKPPLRYEVVRAIKQDFPHLEVVINGGIATLEE---AQEQLTLLDGIMIGRAAYHNP 249
Query: 294 WHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKYGHRPTVRDIVKPLLNLFHS 351
+ +L VD YG TR ++E ++ Y + L G Y R I + +L LF
Sbjct: 250 Y-LLAQVDRYFYGDFHPLPTRHGIMEAFLPYVEEQLAQGIYLSR-----ITRHILGLFQG 303
Query: 352 APGNGLWKR 360
PG W+R
Sbjct: 304 QPGARAWRR 312
>A0YCR8_9GAMM (tr|A0YCR8) tRNA-dihydrouridine synthase OS=marine gamma
proteobacterium HTCC2143 GN=GP2143_08554 PE=3 SV=1
Length = 341
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 194/300 (64%), Gaps = 9/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APMM W+D H R R +++HA +YTEM+ I++ DRFL ++ +HP+ LQ
Sbjct: 8 FSIAPMMAWSDRHCRMFWRQLTQHAVMYTEMVTTGAILHA--GADRFLTYNTGEHPLALQ 65
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGSN + LA T++A +GYDE+NLNCGCPS +V +G FG LM P+ VA+ +SA+
Sbjct: 66 LGGSNPDDLASCTKIAADFGYDEVNLNCGCPSDRVQ-NGMFGACLMAHPQRVADCISAMQ 124
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+++P++VK RIG+D+ +SYDE+ +F+ ++ + FI+H+RKA L G+SP +NR I
Sbjct: 125 DASSLPITVKHRIGIDEMESYDEMLEFVKPIADTGCST-FIVHARKAWLQGLSPKQNRDI 183
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y+ + L +DFP L INGGITS++ + + GVM+GRAAY NP+ +L V
Sbjct: 184 PPLHYDMVHQLKQDFPSLNVIINGGITSIEHCVSHLQL-VDGVMLGRAAYQNPY-LLAEV 241
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D++IY AP+ TR QVL YI Y + L + + + +L LF PG L++R
Sbjct: 242 DSLIYNAPTVIKTRDQVLLDYIPYIEEQLQN---NVALNHMTRHILGLFQGIPGAKLFRR 298
>D5W7L2_BURSC (tr|D5W7L2) tRNA-dihydrouridine synthase OS=Burkholderia sp.
(strain CCGE1002) GN=BC1002_1329 PE=3 SV=1
Length = 333
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 198/327 (60%), Gaps = 9/327 (2%)
Query: 52 LPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFS 111
LP P SVAPMM+WTD H R+L R+IS+H WLYTEM+ +++ ++ R LAF+
Sbjct: 3 LPRTPSPRRVSVAPMMDWTDRHCRSLHRMISRHTWLYTEMVTTGALLH--GDVPRHLAFT 60
Query: 112 PDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF 171
PD+ P+ LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+
Sbjct: 61 PDEAPVALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQL 119
Query: 172 VAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNG 231
VA+ + A+ +VPV+VK RIGVD + Y + DF+ ++ + + FI+H+R A+L G
Sbjct: 120 VADCVKAMRDVVSVPVTVKHRIGVDTVEEYGFVRDFVGTIAE-AGCEVFIVHARNAILKG 178
Query: 232 ISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYN 291
+SP ENR IPPLKY+Y Y L RDFP L INGGI ++DEV + GVM+GR AY+
Sbjct: 179 LSPKENREIPPLKYDYAYQLKRDFPQLEIIINGGIKTLDEVDTHLQH-VDGVMLGREAYH 237
Query: 292 NPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHS 351
NP+ +L VD YG+ TR QV K I Y + + + + + I + L L+
Sbjct: 238 NPY-VLADVDARFYGSTQSPPTRDQVEAKLIEYCATEMARGTY---LGAITRHALGLYRG 293
Query: 352 APGNGLWKRKADAAFRHCTTIKSFFEE 378
G W+R + R + F+E
Sbjct: 294 EAGARGWRRVLSDSKRLAARDLTIFDE 320
>Q9RTQ8_DEIRA (tr|Q9RTQ8) tRNA-dihydrouridine synthase OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_1698
PE=3 SV=1
Length = 333
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 193/333 (57%), Gaps = 9/333 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R R +++ LYTEM+ I++ R L FS +HP+
Sbjct: 8 PHTLSVAPMMDWTDRHCRMFHRTLTRRTLLYTEMVTTGAILHGDQG--RHLDFSAPEHPL 65
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS+ LA+ LA +GYDE+NLNCGCPS +V+ G FG LM P VA A+
Sbjct: 66 ALQLGGSDAAALAECARLAEDWGYDEVNLNCGCPSDRVSS-GSFGACLMGTPDVVARAVE 124
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ A T +PV+VK RIG+DD DSY+ L F+ V++ + + FI+H+RKA L+G+SP EN
Sbjct: 125 AMRAATRLPVTVKHRIGIDDLDSYEHLTGFVRTVAA-AGCEQFIVHARKAWLSGLSPKEN 183
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPL+YE L DFP LT +NGG+ S+ E A A A GVM+GRAAY P+ +L
Sbjct: 184 REIPPLRYEVVQQLKADFPQLTVVLNGGVKSLTEAQQAL-AWADGVMIGRAAYQEPY-LL 241
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
D ++G + +++RR+ +E Y+ Y V + + ++K L LF PG
Sbjct: 242 AAADRDVFGEDAQAVSRREAIEAYLPY---VAAQVEAGQPLNRMMKHTLGLFAGQPGARH 298
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIPDSVLDS 390
WKR L +PD VLD+
Sbjct: 299 WKRTLSEQGHKPGAGLDVVRAALAGVPDDVLDA 331
>C4X0W9_KLEPN (tr|C4X0W9) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044 GN=yjbN PE=3 SV=1
Length = 331
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 184/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE A E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARAQLEH-MDGVMVGREAYQNPG-ILASV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 248 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>Q2SVN4_BURTA (tr|Q2SVN4) tRNA-dihydrouridine synthase OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=BTH_I2494 PE=3 SV=1
Length = 339
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 199/335 (59%), Gaps = 23/335 (6%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS +LA + L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPAELAHSARLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V+S + + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAIEDYAFVRDFVGTVAS-AGCEVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP L INGGIT++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQLEIVINGGITTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
VD YGA + TR V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGVDARFYGATEPAPTREAVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKA--------------DAAFRHCTTIKSFFEE 378
W+R D A H T+ + FFE+
Sbjct: 300 WRRVLSDSKRLARGDLSIFDEARAHLTSPEEFFEK 334
>K2L4Q0_9PROT (tr|K2L4Q0) tRNA-dihydrouridine synthase OS=Thalassospira
xiamenensis M-5 = DSM 17429 GN=TH3_08454 PE=3 SV=1
Length = 331
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 183/304 (60%), Gaps = 16/304 (5%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMM+WTD H R R IS+HA LYTEM+ I++ DR L ++ +HP+ LQ
Sbjct: 7 ISVAPMMDWTDRHDRYFLRQISRHALLYTEMVTTGAIIH--GGADRHLRYNTAEHPVALQ 64
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGSN + LA+A E+AN Y YDEINLNCGCPS +V +G FG LM P VA + A+
Sbjct: 65 LGGSNPDDLARACEIANDYAYDEINLNCGCPSDRVQ-NGAFGACLMATPDVVANCVKAMI 123
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
A +N V+VK RIG+DD + Y L F+ V+ + + FI+H+RKA LNG+SP ENR +
Sbjct: 124 ATSNASVTVKNRIGIDDQEDYPSLKRFVETVAD-AGCRTFIVHARKAWLNGLSPKENREV 182
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPLKYE Y L ++ P+L INGGI ++DE + GVM+GR AY NP+ +L V
Sbjct: 183 PPLKYELVYQLKQELPELEILINGGIKTLDETEEHLKQ-VDGVMIGREAYQNPY-VLSDV 240
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL----GKYGHRPTVRDIVKPLLNLFHSAPGNG 356
D YG + L+R QV E + Y D L G GH + + +L LF G
Sbjct: 241 DRRFYGDDTKPLSRHQVAEAMLPYIDEHLKSNNGTLGH------VTRHMLGLFQQMRGAK 294
Query: 357 LWKR 360
W+R
Sbjct: 295 QWRR 298
>E6T7F9_SHEB6 (tr|E6T7F9) tRNA-dihydrouridine synthase OS=Shewanella baltica
(strain OS678) GN=Sbal678_0829 PE=3 SV=1
Length = 339
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 197/318 (61%), Gaps = 12/318 (3%)
Query: 43 KQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQD 102
K Q H +G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ +
Sbjct: 5 KTQQH-QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRG 62
Query: 103 NLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFG 162
+ +LA++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 63 D---YLAYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFG 118
Query: 163 VSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F I
Sbjct: 119 ACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTI 177
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYG 282
H+RKA L G+SP ENR IPPL YE Y L RD+P L INGG+T++++ A G
Sbjct: 178 HARKAWLQGLSPKENREIPPLDYERVYQLKRDYPTLNIGINGGVTTLEQA-QLHLAQLDG 236
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIV 342
VM+GR AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G + I
Sbjct: 237 VMMGREAYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLQSGGR---LNHIT 292
Query: 343 KPLLNLFHSAPGNGLWKR 360
+ ++ LF PG W+R
Sbjct: 293 RHMIGLFQGLPGARAWRR 310
>A9L1R8_SHEB9 (tr|A9L1R8) tRNA-dihydrouridine synthase OS=Shewanella baltica
(strain OS195) GN=Sbal195_0806 PE=3 SV=1
Length = 339
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 197/318 (61%), Gaps = 12/318 (3%)
Query: 43 KQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQD 102
K Q H +G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ +
Sbjct: 5 KTQQH-QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRG 62
Query: 103 NLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFG 162
+ +LA++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 63 D---YLAYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFG 118
Query: 163 VSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F I
Sbjct: 119 ACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTI 177
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYG 282
H+RKA L G+SP ENR IPPL YE Y L RD+P L INGG+T++++ A G
Sbjct: 178 HARKAWLQGLSPKENREIPPLDYERVYQLKRDYPTLNIGINGGVTTLEQA-QLHLAQLDG 236
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIV 342
VM+GR AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G + I
Sbjct: 237 VMMGREAYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLQSGGR---LNHIT 292
Query: 343 KPLLNLFHSAPGNGLWKR 360
+ ++ LF PG W+R
Sbjct: 293 RHMIGLFQGLPGARAWRR 310
>M2A0R7_KLEPN (tr|M2A0R7) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
hvKP1 GN=G057_20804 PE=3 SV=1
Length = 332
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 184/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>K4U7R6_KLEPN (tr|K4U7R6) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae Ecl8 GN=dusA PE=3 SV=1
Length = 332
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 184/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>G0GUE5_KLEPN (tr|G0GUE5) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
GN=KPN2242_00220 PE=3 SV=1
Length = 332
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 184/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>F9ZVN2_METMM (tr|F9ZVN2) tRNA-dihydrouridine synthase OS=Methylomonas methanica
(strain MC09) GN=Metme_1076 PE=3 SV=1
Length = 323
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 188/300 (62%), Gaps = 9/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
F VAPM++WTD H R RL+S+HA LYTEM+ I+ Q N R L F+P++ P+ LQ
Sbjct: 9 FCVAPMLDWTDRHCRYFYRLLSRHAVLYTEMVTTGAIL--QGNQQRHLQFNPEEQPVALQ 66
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ ELA YGYDE+NLN GCPS +V +G FG LM +P+ VA ++A+
Sbjct: 67 LGGSHPQDLARCAELAEQYGYDEVNLNIGCPSDRVQ-NGRFGACLMAEPELVAACVAAMR 125
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+D+ DSY+EL FI V++ FI+H+RKA L+G+SP +NR I
Sbjct: 126 QAVSIPVTVKSRIGIDERDSYEELTQFIATVAA-GGCDTFIVHARKAWLSGLSPKQNRDI 184
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL YE Y L DFP+L INGGITS+D A + GVM+GR Y+NP+ +L V
Sbjct: 185 PPLCYEMVYRLKHDFPELDIIINGGITSLDASLALLKH-VDGVMLGREVYHNPY-LLSEV 242
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D +YG TR+ V+ + Y V + H + +I + LL LFH G W+R
Sbjct: 243 DRCLYGDDYPQKTRQDVILAMLPY---VRQQLQHGVRLNNIARHLLGLFHGVEGARAWRR 299
>A1RNI1_SHESW (tr|A1RNI1) tRNA-dihydrouridine synthase OS=Shewanella sp. (strain
W3-18-1) GN=Sputw3181_3414 PE=3 SV=1
Length = 343
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 135/309 (43%), Positives = 194/309 (62%), Gaps = 10/309 (3%)
Query: 52 LPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFS 111
+ Y L FS+APM++WTD HYR ARL+S A LYTEM+ I++ + + +LA++
Sbjct: 16 IDTYSLDRTFSIAPMLDWTDRHYRYFARLMSAKALLYTEMVTTGAILHGRGD---YLAYN 72
Query: 112 PDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF 171
++HP+ LQ+GGSN + LA+ +LA GYDE+NLN GCPS +V +G FG LM +P+
Sbjct: 73 QEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 131
Query: 172 VAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNG 231
VAE + A+ ++PV+VK RIG+D+ DSY+ L FI V++ T F IH+RKA L G
Sbjct: 132 VAECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTYFIDIVNAKGCTD-FTIHARKAWLQG 190
Query: 232 ISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYN 291
+SP ENR IPPL YE Y L RD+P L +INGG+T++++ A GVM+GR AY
Sbjct: 191 LSPKENREIPPLDYERVYQLKRDYPVLNISINGGVTTLEQA-QGHLAQLDGVMMGREAYQ 249
Query: 292 NPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHS 351
NP+ IL VD V+ G+ ++R V+E + Y ++ L G + I + ++ LF
Sbjct: 250 NPY-ILARVDQVLCGSQRAVISREDVIEAMLPYIEAHLQAGGR---LNHITRHMIGLFQG 305
Query: 352 APGNGLWKR 360
PG W+R
Sbjct: 306 LPGARAWRR 314
>G4T3K3_META2 (tr|G4T3K3) tRNA-dihydrouridine synthase OS=Methylomicrobium
alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM
B-2133 / 20Z) GN=dusA PE=3 SV=1
Length = 347
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 191/315 (60%), Gaps = 9/315 (2%)
Query: 46 SHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLD 105
S LP F VAPM++WTD H R RL+SKHA+LYTEM+ +++ + D
Sbjct: 17 SKSDSALPEIIASRKFCVAPMLDWTDRHCRYFYRLMSKHAYLYTEMITTGALLH--GDRD 74
Query: 106 RFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSL 165
RFL + PD++P+ Q+GGS+ +LA ++ YGY E+NLN GCPS +V +G FG L
Sbjct: 75 RFLQYHPDENPLACQLGGSHPLELAACAKMVEDYGYHEVNLNVGCPSDRVQ-NGRFGACL 133
Query: 166 MLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSR 225
M P+ VAE +SA+ ++PV+VKCRIG+DD DSY+ L FI VS + + FIIH+R
Sbjct: 134 MATPELVAECLSAMNRVVSIPVTVKCRIGIDDQDSYEALHRFITLVSE-AGCRVFIIHAR 192
Query: 226 KALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMV 285
KA L+G+SP ENR IPPL+Y+ Y + RDFP L +NGG+ S+D+ + GVMV
Sbjct: 193 KAWLSGLSPKENREIPPLRYDVVYRIKRDFPKLEIILNGGVRSLDQALVINDE-VNGVMV 251
Query: 286 GRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPL 345
GR Y NP+ +L VD + Y +R +++E + Y L K G R + I + L
Sbjct: 252 GREVYQNPY-LLAGVDELFYRDFHAIKSREEIVEALLTYVGEQL-KQGVR--LYSIARHL 307
Query: 346 LNLFHSAPGNGLWKR 360
L LFH PG W+R
Sbjct: 308 LGLFHGVPGARSWRR 322
>A8AN75_CITK8 (tr|A8AN75) tRNA-dihydrouridine synthase OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
GN=CKO_03862 PE=3 SV=1
Length = 345
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSIAPMLDWTDRHCRYFLRLLSRQTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAQARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI V+ + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVAGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGITS++E A E GVM+GR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGITSLEEAKAHLEH-MDGVMIGREAYQNPG-ILASV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+GA + V+ Y + L G Y GH I + +L LF PG
Sbjct: 262 DREIFGATTADADPVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>C1D882_LARHH (tr|C1D882) tRNA-dihydrouridine synthase OS=Laribacter
hongkongensis (strain HLHK9) GN=LHK_01687 PE=3 SV=1
Length = 339
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 196/312 (62%), Gaps = 12/312 (3%)
Query: 44 QQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDN 103
Q DKG NY VAPM++WTD HYR ARL+S+H WLYTEM+ +++ +
Sbjct: 5 QTLMDKGTQQNYR-GRRVCVAPMLDWTDRHYRYFARLLSRHTWLYTEMVTTGALIH--GD 61
Query: 104 LDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGV 163
+ R L F +HPI LQ+GGS +LA+ LA ++GYDE+NLN GCPS +V G FG
Sbjct: 62 VPRHLTFHETEHPIALQLGGSEPAELAQCARLAESWGYDEVNLNVGCPSERVQ-KGAFGA 120
Query: 164 SLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIH 223
LM +P VA+ + A+ T +PV+VK RIGVDD +++ + DF+ +V++ + FI+H
Sbjct: 121 CLMKEPGLVADCVRAMRDVTTLPVTVKHRIGVDDVEAFGFVSDFVGEVAAAGCST-FIVH 179
Query: 224 SRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAG-AYG 282
+R A+L G+SP ENR IPPLKY+Y + L +FPDL +NGGI ++DE AA + G G
Sbjct: 180 ARNAILKGLSPKENREIPPLKYDYAWRLKAEFPDLEILVNGGIRTLDE--AAEQLGHVDG 237
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIV 342
VM+GR AY+NP+ +L VD YG TR +V+E+ I Y D+ L G VRDI
Sbjct: 238 VMIGREAYHNPY-LLAGVDARFYGDEHPVPTRAEVIERLIPYVDAHLAAGG---KVRDIA 293
Query: 343 KPLLNLFHSAPG 354
+ +L L + PG
Sbjct: 294 RHVLGLVNGVPG 305
>Q1IWU4_DEIGD (tr|Q1IWU4) tRNA-dihydrouridine synthase OS=Deinococcus
geothermalis (strain DSM 11300) GN=Dgeo_1996 PE=3 SV=1
Length = 344
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 202/341 (59%), Gaps = 18/341 (5%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P FSVAPMM+WTD H R R +++ LYTEM+ I++ + R L FSP +HP+
Sbjct: 8 PHTFSVAPMMDWTDRHCRAFHRTLTRRTLLYTEMVTTGAILH--GDRARHLGFSPAEHPV 65
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS+ LA+ +A +GYDE+NLNCGCPS +V +G FG LM P VA A+
Sbjct: 66 ALQLGGSDPAALAECARIAQDWGYDEVNLNCGCPSDRVQ-NGSFGACLMATPDVVARAVE 124
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ T +PV+VK RIG+DD DSY+ L F+ V+ + + FI+H+RKA L+G+SP EN
Sbjct: 125 AMRGATTLPVTVKHRIGIDDLDSYEHLTRFVRTVAE-AGCQTFIVHARKAWLSGLSPKEN 183
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAARE--AGAYGVMVGRAAYNNPWH 295
R IPPL+YE L DFP LT +NGG+ + + AA+E A A GVMVGRAAY +P+
Sbjct: 184 REIPPLRYEVVRQLKADFPHLTVVLNGGVLT---LAAAQEHLAWADGVMVGRAAYQDPY- 239
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKYGHRPTVRDIVKPLLNLFHSAP 353
+L D ++G TRR+ +E ++ Y + L G+ HR +++ L LF P
Sbjct: 240 LLAAADRDLFGEDVTPPTRREAIEAFLPYVAAQLAEGQPLHR-----MMRHTLGLFAGQP 294
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDS-PVV 393
G WKR E L +P+SVLD+ PVV
Sbjct: 295 GARHWKRTLSERGHRPGAGLEVVREALAGVPESVLDARPVV 335
>D8KC68_NITWC (tr|D8KC68) tRNA-dihydrouridine synthase OS=Nitrosococcus watsoni
(strain C-113) GN=Nwat_3016 PE=3 SV=1
Length = 325
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 189/306 (61%), Gaps = 13/306 (4%)
Query: 57 LPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHP 116
+P S+APMM+WTD H R RLIS HA LYTEM+ +V+ + RFLA +HP
Sbjct: 6 IPYKVSIAPMMDWTDRHCRYFLRLISHHALLYTEMVTTGALVH--GDRIRFLAHHSSEHP 63
Query: 117 IVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAM 176
+ LQ+GGS+ E+LA ++A YG+DE+NLN GCPS +V G FG LM +P+ VAE +
Sbjct: 64 LALQLGGSHPEELALCAQIAEDYGFDEVNLNVGCPSNRVQS-GRFGACLMAEPQLVAECV 122
Query: 177 SAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAE 236
+A+A T +PV+VK RIG+D+ DSY+ L FI V+ + + FIIH+RKA L G+SP E
Sbjct: 123 AAMAQATQIPVTVKTRIGIDEQDSYEALSSFISTVAQ-AGCRTFIIHARKAWLQGLSPKE 181
Query: 237 NRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHI 296
NR PPL+Y+ + RDFP L INGGIT++ EV E GVM+GRAAY+NP+ +
Sbjct: 182 NREKPPLRYDVVRAIKRDFPQLEVMINGGITTLKEVSEHLEL-LDGVMIGRAAYHNPY-L 239
Query: 297 LGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKYGHRPTVRDIVKPLLNLFHSAPG 354
L VD YG TR +++E ++ Y L G Y R T + +L LF PG
Sbjct: 240 LAPVDQRFYGDFRALPTRHEIIEAFLPYAAEQLARGVYLSRMT-----RHILGLFQGQPG 294
Query: 355 NGLWKR 360
W+R
Sbjct: 295 ARAWRR 300
>A0KT37_SHESA (tr|A0KT37) tRNA-dihydrouridine synthase OS=Shewanella sp. (strain
ANA-3) GN=Shewana3_0718 PE=3 SV=1
Length = 334
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/300 (44%), Positives = 191/300 (63%), Gaps = 10/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD HYR ARL+S +A LYTEM+ I++ + + +LA++ ++HP+ LQ
Sbjct: 16 FSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRGD---YLAYNQEEHPLALQ 72
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGSN +LA+ +LA GYDE+NLN GCPS +V +G FG LM +P+ VAE + A+
Sbjct: 73 LGGSNPAELARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPELVAECVDAMK 131
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+D+ DSY+ L FI V + FIIH+RKA L G+SP ENR I
Sbjct: 132 QAVDIPVTVKTRIGIDEQDSYEFLTHFIDTVMA-KGCGEFIIHARKAWLQGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y+ Y L RD+P L +INGGITS+++ + GVMVGR AY NP+ IL V
Sbjct: 191 PPLDYDRVYQLKRDYPTLNISINGGITSLEQAKTHLQH-LDGVMVGREAYQNPY-ILAQV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D ++ G+ ++R V+E + Y ++ L G + I + ++ LF PG W+R
Sbjct: 249 DQLLCGSQKAVMSREAVIETMLPYIEAHLQAGGR---LNHITRHMIGLFQGLPGARAWRR 305
>A4Y3F8_SHEPC (tr|A4Y3F8) tRNA-dihydrouridine synthase OS=Shewanella putrefaciens
(strain CN-32 / ATCC BAA-453) GN=Sputcn32_0761 PE=3 SV=1
Length = 343
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 135/309 (43%), Positives = 193/309 (62%), Gaps = 10/309 (3%)
Query: 52 LPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFS 111
+ Y L FS+APM++WTD HYR ARL+S A LYTEM+ I++ + + +LA++
Sbjct: 16 IDTYSLDRTFSIAPMLDWTDRHYRYFARLMSAKALLYTEMVTTGAILHGRGD---YLAYN 72
Query: 112 PDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF 171
++HP+ LQ+GGSN + LA+ +LA GYDE+NLN GCPS +V +G FG LM +P
Sbjct: 73 QEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPDL 131
Query: 172 VAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNG 231
VAE + A+ ++PV+VK RIG+D+ DSY+ L FI V++ T F IH+RKA L G
Sbjct: 132 VAECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTYFIDIVNAKGCTD-FTIHARKAWLQG 190
Query: 232 ISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYN 291
+SP ENR IPPL YE Y L RD+P L +INGG+T++++ A GVM+GR AY
Sbjct: 191 LSPKENREIPPLDYERVYQLKRDYPVLNISINGGVTTLEQA-QGHLAQLDGVMMGREAYQ 249
Query: 292 NPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHS 351
NP+ IL VD V+ G+ ++R V+E + Y ++ L G + I + ++ LF
Sbjct: 250 NPY-ILARVDQVLCGSQRAVISREDVIEAMLPYIEAHLQAGGR---LNHITRHMIGLFQG 305
Query: 352 APGNGLWKR 360
PG W+R
Sbjct: 306 LPGARAWRR 314
>A3D8J7_SHEB5 (tr|A3D8J7) tRNA-dihydrouridine synthase OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=Sbal_3585 PE=3 SV=1
Length = 339
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 198/321 (61%), Gaps = 18/321 (5%)
Query: 43 KQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQD 102
K Q H +G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ +
Sbjct: 5 KTQQH-QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRG 62
Query: 103 NLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFG 162
+ +LA++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 63 D---YLAYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFG 118
Query: 163 VSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F I
Sbjct: 119 ACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTI 177
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYG 282
H+RKA L G+SP ENR IPPL YE Y L RD+P L INGGIT++++ A G
Sbjct: 178 HARKAWLQGLSPKENREIPPLDYERVYQLKRDYPALNIGINGGITTLEQA-QLHLAQLDG 236
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL---GKYGHRPTVR 339
VM+GR AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G+ H
Sbjct: 237 VMMGREAYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLLSGGRLNH----- 290
Query: 340 DIVKPLLNLFHSAPGNGLWKR 360
I + ++ LF PG W+R
Sbjct: 291 -ITRHMIGLFQGLPGARAWRR 310
>G0DLX5_9GAMM (tr|G0DLX5) tRNA-dihydrouridine synthase OS=Shewanella baltica
OS117 GN=Sbal117_3728 PE=3 SV=1
Length = 339
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 198/321 (61%), Gaps = 18/321 (5%)
Query: 43 KQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQD 102
K Q H +G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ +
Sbjct: 5 KTQQH-QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRG 62
Query: 103 NLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFG 162
+ +LA++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 63 D---YLAYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFG 118
Query: 163 VSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F I
Sbjct: 119 ACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTI 177
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYG 282
H+RKA L G+SP ENR IPPL YE Y L RD+P L INGGIT++++ A G
Sbjct: 178 HARKAWLQGLSPKENREIPPLDYERVYQLKRDYPALNIGINGGITTLEQA-QLHLAQLDG 236
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL---GKYGHRPTVR 339
VM+GR AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G+ H
Sbjct: 237 VMMGREAYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLLSGGRLNH----- 290
Query: 340 DIVKPLLNLFHSAPGNGLWKR 360
I + ++ LF PG W+R
Sbjct: 291 -ITRHMIGLFQGLPGARAWRR 310
>K2JTN6_9GAMM (tr|K2JTN6) tRNA-dihydrouridine synthase OS=Gallaecimonas
xiamenensis 3-C-1 GN=B3C1_10062 PE=3 SV=1
Length = 323
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 188/300 (62%), Gaps = 10/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD HYR AR +S+HA LYTEM+ I++ + + +LAFS +HP+ LQ
Sbjct: 6 FSVAPMLDWTDRHYRVFARQLSRHALLYTEMVTTGAIIHGKGD---YLAFSEAEHPVALQ 62
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGSN LA +LA GYDE+N+N GCPS +V +G FG LM +P VA+ + A+
Sbjct: 63 LGGSNPADLAHCAKLAEERGYDEVNINVGCPSDRVQ-NGRFGACLMAEPTLVADCVKAMK 121
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY L DF+ +S + FI+H+RKA L+G+SP ENR I
Sbjct: 122 DAVSIPVTVKSRIGIDDMDSYPFLVDFVSTISE-AGCDTFIVHARKAWLSGLSPKENREI 180
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L +DFP+L INGGI ++DE+ A VMVGR AY NP+ +L V
Sbjct: 181 PPLDYPRVYQLKKDFPNLHIGINGGIKTLDEM-QGHLAHVDSVMVGREAYQNPY-LLAEV 238
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D +YG S ++RR V+E Y ++ L G R + I + +L LF+ G W+R
Sbjct: 239 DAALYGVDSAMVSRRAVVEAMFPYIEAELAA-GAR--LNHISRHMLGLFNGQTGGRRWRR 295
>H5V753_ESCHE (tr|H5V753) tRNA-dihydrouridine synthase OS=Escherichia hermannii
NBRC 105704 GN=dusA PE=3 SV=1
Length = 332
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 190/311 (61%), Gaps = 15/311 (4%)
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP 112
P + FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S
Sbjct: 7 PTAFAAHRFSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSE 63
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + V
Sbjct: 64 EEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLV 122
Query: 173 AEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGI 232
A+ + A+ ++PV+VK RIG+DD DSY+ LC+FI VS + FIIH+RKA L+G+
Sbjct: 123 ADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCEFINTVSGKGECEMFIIHARKAWLSGL 182
Query: 233 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
SP ENR IPPL Y Y L RDFP LT +INGGITS+++ A E GVMVGR AY N
Sbjct: 183 SPKENREIPPLDYPRVYQLKRDFPHLTMSINGGITSLEQAKAHLEH-MDGVMVGREAYQN 241
Query: 293 PWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLF 349
P +L VD I+G S V+ Y + L G Y GH I + +L LF
Sbjct: 242 PG-MLAAVDREIFGVAGASPDPVSVVRAMYPYIERELSQGAYLGH------ITRHMLGLF 294
Query: 350 HSAPGNGLWKR 360
PG W+R
Sbjct: 295 QGVPGARQWRR 305
>N3JSB8_ECOLX (tr|N3JSB8) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli MP020980.1 GN=dusA PE=4 SV=1
Length = 345
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H+R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHFRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I + +L LF PG
Sbjct: 262 DREIFGSSDTDADLVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>E4ZBC2_NEIL0 (tr|E4ZBC2) tRNA-dihydrouridine synthase OS=Neisseria lactamica
(strain 020-06) GN=NLA_4090 PE=3 SV=1
Length = 336
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 192/312 (61%), Gaps = 8/312 (2%)
Query: 57 LPPW-FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
LPP SVAPM++WTD HYR +AR I+++ WLY+EM+ A IVY + DRFL F+ +
Sbjct: 8 LPPRRLSVAPMLDWTDRHYRYMARQITRNTWLYSEMVNAGAIVY--GDKDRFLMFNEGEQ 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
P+ LQ+GGS+ LAKA + AYGY+E+NLNCGCPSP+V G FG LM + VA+
Sbjct: 66 PVALQLGGSDPSDLAKAAKAVEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGLVADC 124
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
++A+ ++PV+VK RIGVD Y + DF+ + + + FI+H+R A L+G+SP
Sbjct: 125 LNAMQDAVHIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACRTFIVHARNAWLDGLSPK 184
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR +PPLKY+Y Y L ++FP+L INGGIT+ +E A GVMVGR AY+NP
Sbjct: 185 ENRDVPPLKYDYVYRLKQEFPELEIIINGGITA-NEAIAGHLQHVDGVMVGREAYHNP-M 242
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGN 355
++ D + YG + ++++ Y + + + G +R IV+ L L H G
Sbjct: 243 VMHEWDRLFYGDTRSPIEYADLVQRLYTYSQAQI-QAGRGTILRHIVRHSLGLMHGLKGA 301
Query: 356 GLWKRK-ADAAF 366
W+R +DAA
Sbjct: 302 RTWRRMLSDAAL 313
>M0SG41_MUSAM (tr|M0SG41) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 220
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 130/144 (90%)
Query: 62 SVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQI 121
S+APMM+WTD+HYRTLARLISKHAWLYTEM+ AETIV+Q +NLDRFLAFSP QHPIVLQI
Sbjct: 7 SIAPMMDWTDNHYRTLARLISKHAWLYTEMVVAETIVHQSENLDRFLAFSPIQHPIVLQI 66
Query: 122 GGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAA 181
GGSN+ LAKA ELAN+Y YDEINLNCGCPS KVAGHGCFG LM DP+FV +AMSAIA+
Sbjct: 67 GGSNLTNLAKAAELANSYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDAMSAIAS 126
Query: 182 NTNVPVSVKCRIGVDDHDSYDELC 205
N +VPVSVKCRIGVDD DSYDELC
Sbjct: 127 NCDVPVSVKCRIGVDDRDSYDELC 150
>K8R9L2_9BURK (tr|K8R9L2) tRNA-dihydrouridine synthase OS=Burkholderia sp. SJ98
GN=BURK_022865 PE=3 SV=1
Length = 334
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 200/332 (60%), Gaps = 13/332 (3%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+L RL+S+H WLYTEM+ ++Y ++ R LAF+P + P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSLHRLVSRHTWLYTEMVTTGALLY--GDVARHLAFTPAEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LAK+ +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAKSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMKEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y+ + DF+ ++ + + FI+H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDTVEEYEFVRDFVGTIAD-AGCEVFIVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKYEY Y L RDFP L +INGGI ++DEV + GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYEYAYRLKRDFPQLEISINGGIKTLDEVEEHLKH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVY--GDSVLGKYGHRPTVRDIVKPLLNLFHSAPGN 355
VDT YGA + +R ++ I Y G+ G Y + + + L L+ G
Sbjct: 243 AGVDTRFYGANTPVPSREEIEAGLIDYARGELTRGTY-----LGAVTRHALGLYRGVAGA 297
Query: 356 GLWKRKADAAFRHCTTIKSFFEETLVAIPDSV 387
W+R R + F+E + ++V
Sbjct: 298 RGWRRVLSDNRRLAKGNLTIFDEARAHLREAV 329
>F0A9D2_NEIME (tr|F0A9D2) tRNA-dihydrouridine synthase OS=Neisseria meningitidis
M13399 GN=NMBM13399_0346 PE=3 SV=1
Length = 336
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 186/305 (60%), Gaps = 7/305 (2%)
Query: 57 LPPW-FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
LPP SVAPM++WTD HYR LAR I+++ WLY+EM+ A IVY + DRFL F+ +
Sbjct: 8 LPPRHLSVAPMLDWTDRHYRYLARQITRNTWLYSEMVNAGAIVY--GDKDRFLMFNEGEQ 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
P+ LQ+GGS+ LAKA + A YGY+E+NLNCGCPSP+V G FG LM + VA+
Sbjct: 66 PVALQLGGSDPSDLAKAAKAAEVYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGLVADC 124
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
++A+ +PV+VK RIGVD Y + DF+ + + K FI+H+R A L+G+SP
Sbjct: 125 LNAMQDAVKIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWLDGLSPK 184
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR +PPLKY+Y Y L ++FP L INGGIT+ +E A GVMVGR AY+NP
Sbjct: 185 ENRDVPPLKYDYVYRLKQEFPGLEIIINGGITT-NEAIAGHLQHVDGVMVGREAYHNP-M 242
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGN 355
++ D + YG + ++++ Y + + + G +R IV+ L L H G
Sbjct: 243 VMREWDRLFYGDTRSPIEYADLVQRLYTYSQAQI-QAGRGTILRHIVRHSLGLMHGLKGA 301
Query: 356 GLWKR 360
W+R
Sbjct: 302 RTWRR 306
>B8GSM9_THISH (tr|B8GSM9) tRNA-dihydrouridine synthase OS=Thioalkalivibrio sp.
(strain HL-EbGR7) GN=Tgr7_1852 PE=3 SV=1
Length = 336
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 186/299 (62%), Gaps = 9/299 (3%)
Query: 62 SVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQI 121
SVAPMM+WTD H R RLIS+H LYTEM+ +++ + +RFLAF PD+HP+ LQ+
Sbjct: 22 SVAPMMDWTDRHCRYFLRLISRHTLLYTEMVTTGALLH--GDRERFLAFHPDEHPLALQL 79
Query: 122 GGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAA 181
GGS +LA +A +GYDE+NLN GCPS +V G FG LM +P+ VA+ + A+ +
Sbjct: 80 GGSEPGELAACARMAEDHGYDEVNLNVGCPSDRVQS-GRFGACLMAEPQLVADCVEAMRS 138
Query: 182 NTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIP 241
+PV+VK RIG+DD DSY EL FI V S + FIIH+RKA L G+SP ENR +P
Sbjct: 139 ACGLPVTVKTRIGIDDRDSYPELTAFIDTVQR-SGCRTFIIHARKAWLQGLSPRENREVP 197
Query: 242 PLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVD 301
PL++++ Y L +DFP L +NGG+ +D V A GVM+GR AY+NP+ +L VD
Sbjct: 198 PLRHDWVYRLKQDFPALEIILNGGVKDLDTVSDALRQ-VDGVMLGREAYHNPY-VLAQVD 255
Query: 302 TVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
YG +R QV+E+++ Y V + ++ + + +L LF PG W+R
Sbjct: 256 ARFYGDAHPVPSRHQVVERFLPY---VEARLAQGVPLQAMTRHILGLFQGVPGARAWRR 311
>H1YVB4_9GAMM (tr|H1YVB4) tRNA-dihydrouridine synthase OS=Shewanella baltica
OS183 GN=Sbal183_3501 PE=3 SV=1
Length = 339
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 198/321 (61%), Gaps = 18/321 (5%)
Query: 43 KQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQD 102
K Q H +G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ +
Sbjct: 5 KTQQH-QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRG 62
Query: 103 NLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFG 162
+ +LA++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 63 D---YLAYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFG 118
Query: 163 VSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F I
Sbjct: 119 ACLMAEPELVAECVDAMKQVIDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTI 177
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYG 282
H+RKA L G+SP ENR IPPL YE Y L RD+P L INGG+T++++ A G
Sbjct: 178 HARKAWLQGLSPKENREIPPLDYERVYQLKRDYPTLNIGINGGVTTLEQA-QLHLAQLDG 236
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL---GKYGHRPTVR 339
VM+GR AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G+ H
Sbjct: 237 VMMGREAYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLLSGGRLNH----- 290
Query: 340 DIVKPLLNLFHSAPGNGLWKR 360
I + ++ LF PG W+R
Sbjct: 291 -ITRHMIGLFQGLPGARAWRR 310
>G0AXX9_9GAMM (tr|G0AXX9) tRNA-dihydrouridine synthase OS=Shewanella baltica
BA175 GN=Sbal175_0807 PE=3 SV=1
Length = 339
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 198/321 (61%), Gaps = 18/321 (5%)
Query: 43 KQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQD 102
K Q H +G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ +
Sbjct: 5 KTQQH-QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRG 62
Query: 103 NLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFG 162
+ +LA++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG
Sbjct: 63 D---YLAYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFG 118
Query: 163 VSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFII 222
LM +P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F I
Sbjct: 119 ACLMAEPELVAECVDAMKQVIDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTI 177
Query: 223 HSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYG 282
H+RKA L G+SP ENR IPPL YE Y L RD+P L INGG+T++++ A G
Sbjct: 178 HARKAWLQGLSPKENREIPPLDYERVYQLKRDYPTLNIGINGGVTTLEQA-QLHLAQLDG 236
Query: 283 VMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL---GKYGHRPTVR 339
VM+GR AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G+ H
Sbjct: 237 VMMGREAYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLLSGGRLNH----- 290
Query: 340 DIVKPLLNLFHSAPGNGLWKR 360
I + ++ LF PG W+R
Sbjct: 291 -ITRHMIGLFQGLPGARAWRR 310
>D3PTQ5_MEIRD (tr|D3PTQ5) tRNA-dihydrouridine synthase OS=Meiothermus ruber
(strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21)
GN=Mrub_2084 PE=3 SV=1
Length = 339
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/300 (44%), Positives = 194/300 (64%), Gaps = 10/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPM++WTD H+R L RLIS+ LYTEM+ ++I+ N + L FSP++HP+ LQ
Sbjct: 11 LSVAPMLDWTDRHFRYLVRLISRRVRLYTEMVVDQSILL--GNRPKLLDFSPEEHPVALQ 68
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS EKLA+A + A+GYDEINLN GCPS +V G G FG LML+P VAE+M+A+
Sbjct: 69 LGGSVPEKLAEAARIGEAWGYDEINLNLGCPSERVQG-GGFGACLMLEPDLVAESMAAMR 127
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+PV+ K R+GVD+ + Y L F+ K++ + FI+H+RKA L G+SPAENR+I
Sbjct: 128 QAVKIPVTAKHRLGVDEVEDYRYLARFVEKLAGVG-VGVFIVHARKAYLKGLSPAENRTI 186
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+Y++ Y L +DFP LT +NGG+ +++EV A A GVM+GRA Y +P+ +L
Sbjct: 187 PPLRYDWVYRLKQDFPHLTIVLNGGVRTLEEV-QAHLAKVDGVMLGRAVYEDPF-VLEPA 244
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D ++G + TR +V + + Y ++ L + + + + +LNLF P LW+R
Sbjct: 245 DRRLFGEAHAT-TRLEVAQAMLRYAEAQLEQG---TPLWAMARHMLNLFKGQPRGRLWRR 300
>H2ID06_9VIBR (tr|H2ID06) tRNA-dihydrouridine synthase OS=Vibrio sp. EJY3
GN=VEJY3_13965 PE=3 SV=1
Length = 326
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 196/327 (59%), Gaps = 9/327 (2%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPM++WTD H R RL++K LYTEM+ I++ + + FLA++ ++HP+ LQ
Sbjct: 7 LSVAPMLDWTDRHCRYFHRLMTKETLLYTEMVTTGAIIHGKGD---FLAYNEEEHPLALQ 63
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGSN E LAK +LA GYDEINLN GCPS +V +G FG LM +P+ VA+ ++A+
Sbjct: 64 LGGSNPEDLAKCAKLAEERGYDEINLNVGCPSDRVQ-NGRFGACLMAEPQLVADCVAAMK 122
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+VPV+VK RIG+DD DSY+ L DF+ VS + F IH+RKA L+G+SP ENR I
Sbjct: 123 DVVDVPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWLSGLSPKENREI 182
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L +DF LT INGG+ S++E A + GVM+GR AY +P+ IL V
Sbjct: 183 PPLDYPRAYQLKKDFSHLTVAINGGVKSLEEAKAHLQH-LDGVMIGREAYQSPY-ILASV 240
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D ++G+ + R +++E+ Y + L K + + I + +L LF S PG W+R
Sbjct: 241 DQELFGSSAPVKKRSEIVEEMYPYIEEQLAKGAY---IGHITRHMLGLFQSMPGARQWRR 297
Query: 361 KADAAFRHCTTIKSFFEETLVAIPDSV 387
+ ++ L IP +
Sbjct: 298 HISENAHKPGSGLEVLQDALAKIPKEL 324
>E6XJJ8_SHEP2 (tr|E6XJJ8) tRNA-dihydrouridine synthase OS=Shewanella putrefaciens
(strain 200) GN=Sput200_0690 PE=3 SV=1
Length = 343
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 194/309 (62%), Gaps = 10/309 (3%)
Query: 52 LPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFS 111
+ Y L FS+APM++WTD HYR ARL+S A LYTEM+ I++ + + +LA++
Sbjct: 16 IDTYSLDRTFSIAPMLDWTDRHYRYFARLMSAKALLYTEMVTTGAILHGRGD---YLAYN 72
Query: 112 PDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF 171
++HP+ LQ+GGSN + LA+ +LA GYDE+NLN GCPS +V +G FG LM +P+
Sbjct: 73 QEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 131
Query: 172 VAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNG 231
VAE + A+ ++PV+VK RIG+D+ DSY+ L FI V++ T F IH+RKA L G
Sbjct: 132 VAECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTYFIDIVNAKGCTD-FTIHARKAWLQG 190
Query: 232 ISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYN 291
+SP ENR IPPL YE Y L RD+P L +INGG+T++++ + GVM+GR AY
Sbjct: 191 LSPKENREIPPLDYERVYQLKRDYPVLNISINGGVTTLEQA-QGHLSQLDGVMMGREAYQ 249
Query: 292 NPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHS 351
NP+ IL VD V+ G+ ++R V+E + Y ++ L G + I + ++ LF
Sbjct: 250 NPY-ILARVDQVLCGSQRAVISREDVIEAMLPYIEAHLQAGGR---LNHITRHMIGLFQG 305
Query: 352 APGNGLWKR 360
PG W+R
Sbjct: 306 LPGARAWRR 314
>J2QZ48_KLEPN (tr|J2QZ48) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH11 GN=KPNIH11_22173 PE=3 SV=1
Length = 331
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 248 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>J2FYM4_KLEPN (tr|J2FYM4) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH12 GN=KPNIH12_16318 PE=3 SV=1
Length = 331
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 248 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>J1U1U3_KLEPN (tr|J1U1U3) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH1 GN=KPNIH1_15860 PE=3 SV=1
Length = 331
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 248 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>G8W6A0_KLEPH (tr|G8W6A0) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae (strain HS11286) GN=KPHS_02730 PE=3
SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>R9BKY7_KLEPN (tr|R9BKY7) tRNA dihydrouridine synthase A OS=Klebsiella pneumoniae
UHKPC23 GN=dusA PE=4 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>N9US83_KLEPN (tr|N9US83) tRNA-dihydrouridine synthase A OS=Klebsiella pneumoniae
subsp. pneumoniae KpMDU1 GN=C210_01559 PE=4 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>M7QAM9_KLEPN (tr|M7QAM9) tRNA-dihydrouridine synthase A OS=Klebsiella pneumoniae
ATCC BAA-1705 GN=KPBAA1705_11107 PE=4 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>M7PAA1_KLEPN (tr|M7PAA1) tRNA-dihydrouridine synthase A OS=Klebsiella pneumoniae
ATCC BAA-2146 GN=G000_24330 PE=4 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>M5QBD8_KLEPN (tr|M5QBD8) tRNA-dihydrouridine synthase A OS=Klebsiella pneumoniae
RYC492 GN=KPRYC492_23975 PE=4 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>M5GS23_KLEPN (tr|M5GS23) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KpQ3 GN=B819_19991 PE=4 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>K4SVL4_KLEPN (tr|K4SVL4) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO GN=BN18_2971 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>K4SAG4_KLEPN (tr|K4SAG4) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO GN=BN427_0811 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>K4S588_KLEPN (tr|K4S588) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO GN=BN426_5343 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2W0R3_KLEPN (tr|J2W0R3) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH23 GN=KPNIH23_09466 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2UZW9_KLEPN (tr|J2UZW9) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH21 GN=KPNIH21_11914 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2UIR7_KLEPN (tr|J2UIR7) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH19 GN=KPNIH19_10862 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2U0I7_KLEPN (tr|J2U0I7) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH20 GN=KPNIH20_17474 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2S097_KLEPN (tr|J2S097) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH14 GN=KPNIH14_15595 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2QIW6_KLEPN (tr|J2QIW6) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH10 GN=KPNIH10_16991 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2PLF1_KLEPN (tr|J2PLF1) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH9 GN=KPNIH9_18960 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2MG66_KLEPN (tr|J2MG66) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH4 GN=KPNIH4_13100 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2CGD9_KLEPN (tr|J2CGD9) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH22 GN=KPNIH22_15834 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J2A2B9_KLEPN (tr|J2A2B9) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH18 GN=KPNIH18_16418 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1Z951_KLEPN (tr|J1Z951) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH16 GN=KPNIH16_17110 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1Z8Q2_KLEPN (tr|J1Z8Q2) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH17 GN=KPNIH17_16895 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1X4F2_KLEPN (tr|J1X4F2) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH8 GN=KPNIH8_15536 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1VYS7_KLEPN (tr|J1VYS7) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH7 GN=KPNIH7_17043 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1VKI7_KLEPN (tr|J1VKI7) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH5 GN=KPNIH5_12923 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1V1H8_KLEPN (tr|J1V1H8) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH6 GN=KPNIH6_13997 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>J1TMI1_KLEPN (tr|J1TMI1) tRNA-dihydrouridine synthase OS=Klebsiella pneumoniae
subsp. pneumoniae KPNIH2 GN=KPNIH2_16252 PE=3 SV=1
Length = 332
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 15 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 71
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 72 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 130
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 191 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARVQLEH-MDGVMVGREAYQNPG-ILASV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 249 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 302
Query: 358 WKR 360
W+R
Sbjct: 303 WRR 305
>H8Z5M5_9GAMM (tr|H8Z5M5) tRNA-dihydrouridine synthase OS=Thiorhodovibrio sp. 970
GN=Thi970DRAFT_04248 PE=3 SV=1
Length = 315
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 189/295 (64%), Gaps = 9/295 (3%)
Query: 66 MMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSN 125
M++WTD H+R ARLIS+H WLY+EM+ +++ + RFL F P +HP+ LQ+GGS+
Sbjct: 1 MLDWTDKHFRFFARLISRHTWLYSEMITTGALIH--GDTGRFLRFDPAEHPLALQLGGSD 58
Query: 126 VEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNV 185
+LA+ + +GYDEINLN GCPS +V +G FG LM +P+ VA+ ++A+ A ++
Sbjct: 59 PAELARCARMGADWGYDEINLNVGCPSDRVQ-NGRFGACLMAEPELVADCVAAMKAAVSI 117
Query: 186 PVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKY 245
PVSVK RIG+DD DSY+EL DF+ ++S+ + ++H+RKA L G+SP ENR +PPL+Y
Sbjct: 118 PVSVKTRIGIDDRDSYEELADFVTRISA-AGCDLLVLHARKAWLQGLSPRENREVPPLRY 176
Query: 246 EYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIY 305
+ L DFP L +NGGIT++++ E GVM+GR AY NPW +L D+ ++
Sbjct: 177 DVALQLRADFPRLPLVLNGGITTLEQAQYWCER-LDGVMIGREAYQNPW-LLAAADSELF 234
Query: 306 GAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
G +R QVLE++ Y + LG+ + I + LL LF+ PG W+R
Sbjct: 235 GDAHPLPSRHQVLERFYPYVERCLGEG---VPLNSISRHLLGLFNGCPGARRWRR 286
>M7Q188_KLEPN (tr|M7Q188) tRNA-dihydrouridine synthase A OS=Klebsiella pneumoniae
700603 GN=KP700603_21718 PE=4 SV=1
Length = 331
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 183/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARMQLEH-MDGVMVGREAYQNP-GILASV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGK---YGHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L K GH I + +L LF PG
Sbjct: 248 DREIFGVAGADADPVAVVRAMYPYIERELSKGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>A7AWB5_BABBO (tr|A7AWB5) tRNA-dihydrouridine synthase OS=Babesia bovis
GN=BBOV_I002610 PE=3 SV=1
Length = 362
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 197/320 (61%), Gaps = 16/320 (5%)
Query: 45 QSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVY-QQDN 103
+SHD+ P +APM++ T + +R RLI+K A L+TEM+A +++Y D
Sbjct: 11 RSHDR---------PLVQIAPMLDITYYEFRQFMRLITKRAQLWTEMMADGSLIYGDSDK 61
Query: 104 LDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGV 163
+ L ++HPIVLQ+GG+N++ L+KA +A YGY E NLN GCPS +V+G GCFG
Sbjct: 62 VGSMLHCDANEHPIVLQLGGNNLDSLSKAGNIALGYGYTEFNLNVGCPSTRVSGKGCFGA 121
Query: 164 SLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIH 223
+LM D V + + + PV+VK R+GVD +DSY+ + DFI V+ T FI+H
Sbjct: 122 ALMNDAPLVGRIVKHLRSELGTPVTVKHRLGVDHNDSYEFVRDFISTVADQGCTD-FIVH 180
Query: 224 SRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGV 283
+RKA LNGI+P +NRSIPPL +E Y L ++FP+L +INGGI S++E+ A G YGV
Sbjct: 181 ARKAWLNGINPRKNRSIPPLDHERVYRLCQEFPNLNISINGGIKSLEEIKYALSRGVYGV 240
Query: 284 MVGRAAYNNPWHILGHVDTVIYGA---PSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRD 340
MVGR AY NP ++ VDT IYG P+ TRR +LE Y + DS + V
Sbjct: 241 MVGRMAYENPCGLV-RVDTDIYGEATNPATCKTRRILLETYANFIDSQASRTSDM-NVCM 298
Query: 341 IVKPLLNLFHSAPGNGLWKR 360
+VKP+L FH G ++++
Sbjct: 299 LVKPILGTFHGEVGTKIFRQ 318
>Q0VPD7_ALCBS (tr|Q0VPD7) tRNA-dihydrouridine synthase OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=yjbN PE=3 SV=1
Length = 348
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 198/333 (59%), Gaps = 9/333 (2%)
Query: 52 LPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFS 111
LP+ L SVAPMM+WT YR LARLI++H LYTEM+ A+ I++ + DRFL F+
Sbjct: 25 LPHQPLDRRLSVAPMMDWTTRDYRFLARLITRHTLLYTEMVVAQAILH--GDRDRFLDFN 82
Query: 112 PDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF 171
++HP+ LQ+GGS+ ++LA+AT +A YGYDEINLN GCPS +V G G LM +P+
Sbjct: 83 DEEHPVALQLGGSDPQQLAQATRIAGDYGYDEINLNVGCPSDRVQ-QGKIGAILMAEPEL 141
Query: 172 VAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNG 231
VA + A+ A VPV+VK RIG+DD D YD L F+ ++ + T IH+RKA+L+G
Sbjct: 142 VARCVEAMQAEVTVPVTVKTRIGIDDQDDYDFLYRFVDRMEASGCTS-LTIHARKAILSG 200
Query: 232 ISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYN 291
+SP ENR IPPL Y+ Y + FP + +NGG+ +++EV+ GVM+GR AY
Sbjct: 201 LSPKENRDIPPLIYQRAYAIKHAFPHIEIILNGGVKTLNEVH-EHMGEVDGVMIGREAYQ 259
Query: 292 NPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHS 351
NP+ L D V++G +R+ + E+++ Y + GH P + ++ +LNLF
Sbjct: 260 NPY-FLAEADRVVFGDDHAIPSRQTIAEQFLPYVERRYA-LGHAP--KHSLRHILNLFQG 315
Query: 352 APGNGLWKRKADAAFRHCTTIKSFFEETLVAIP 384
PG ++R T + L +P
Sbjct: 316 QPGARRFRRHLSENMHKPGTTPQVLMDALSQLP 348
>I3Y9Y5_THIV6 (tr|I3Y9Y5) tRNA-dihydrouridine synthase OS=Thiocystis violascens
(strain ATCC 17096 / DSM 198 / 6111) GN=Thivi_1832 PE=3
SV=1
Length = 336
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 187/301 (62%), Gaps = 9/301 (2%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
+VAPM++WTD H+R RLI++H+ LYTEM+ +++ + +RFL F P +HP+ LQ
Sbjct: 17 IAVAPMLDWTDRHFRFFLRLITRHSLLYTEMVTTGALLH--GDRERFLRFDPAEHPVALQ 74
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ ++A+ L +GYDEIN+N GCPS +V +G FG LM +P VA+ ++A+
Sbjct: 75 LGGSDPVEMARCARLGANWGYDEININVGCPSDRVQ-NGRFGACLMAEPGLVADCVAAMK 133
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
VPV+VK RIG+DD DSY EL DF+ + + I+H+RKA L G+SP ENR +
Sbjct: 134 DAVTVPVTVKTRIGIDDRDSYGELVDFV-GTQAAAGCDALIVHARKAWLKGLSPKENRDV 192
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+YE L DFPDLT +INGGI ++ E A GVM+GR AY+NPW +L
Sbjct: 193 PPLRYEVVQQLKTDFPDLTISINGGIKTLIEA-ADFLTTLDGVMIGREAYHNPW-MLAQA 250
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D V++G LTR +VL++++ Y L + + + LL LF PG W+R
Sbjct: 251 DRVVFGDDHPPLTRHEVLDRFLPYAQRELAAG---VPLSAMSRHLLGLFQGQPGGRAWRR 307
Query: 361 K 361
+
Sbjct: 308 R 308
>D0HBH3_VIBMI (tr|D0HBH3) tRNA-dihydrouridine synthase OS=Vibrio mimicus VM223
GN=VMA_000316 PE=3 SV=1
Length = 335
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 195/331 (58%), Gaps = 13/331 (3%)
Query: 56 YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
Y P FSVAPM++WTD H R RL+S A LYTEM+ I++ + + FLA++ ++H
Sbjct: 10 YAPCRFSVAPMLDWTDRHCRYFHRLLSSQALLYTEMVTTGAIIHGRGD---FLAYNQEEH 66
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
P+ LQ GGSN + LA +LA GYDEINLN GCPS +V +G FG LM +P VAE
Sbjct: 67 PVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQ-NGRFGACLMAEPDLVAEC 125
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
++A+ + ++PV+VK RIG+DD DSY+ L FI V+ + F IH+RKA L+G+SP
Sbjct: 126 VAAMRSVVDIPVTVKTRIGIDDQDSYEFLTQFISTVAEKGGCEQFTIHARKAWLSGLSPK 185
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY--GVMVGRAAYNNP 293
ENR IPPL Y Y + RD P LT +NGG+ +++E A++ Y GVM+GR AY NP
Sbjct: 186 ENREIPPLDYPRAYQIKRDLPHLTIAVNGGVKTLEE---AQQHLQYLDGVMIGREAYQNP 242
Query: 294 WHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAP 353
+ +L VD I+G + R QV+ + + Y + L + H + + + +L LF + P
Sbjct: 243 Y-LLAEVDQQIFGLDTPVKKRSQVIHEMMPYIERELSQGTH---LGHMTRHMLGLFQNMP 298
Query: 354 GNGLWKRKADAAFRHCTTIKSFFEETLVAIP 384
G W+R E+ L IP
Sbjct: 299 GARQWRRHISENAHKPGAGLEVVEQALAKIP 329
>N4MPX8_ECOLX (tr|N4MPX8) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli 178850 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>M9HAQ9_ECOLX (tr|M9HAQ9) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli MP021552.8 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>M8Q574_ECOLX (tr|M8Q574) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli C-34666 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>M8LAQ1_ECOLX (tr|M8LAQ1) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli MP021552.12 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>M8KH45_ECOLX (tr|M8KH45) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli MP021552.11 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>M4JL46_ECOLX (tr|M4JL46) tRNA-dihydrouridine synthase A OS=Escherichia coli APEC
O78 GN=APECO78_01155 PE=4 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L3PG53_ECOLX (tr|L3PG53) tRNA-dihydrouridine synthase OS=Escherichia coli KTE72
GN=A1UG_04542 PE=3 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L2X1V5_ECOLX (tr|L2X1V5) tRNA-dihydrouridine synthase OS=Escherichia coli KTE21
GN=WE9_05131 PE=3 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>J7RZA0_ECOLX (tr|J7RZA0) tRNA-dihydrouridine synthase OS=Escherichia coli
chi7122 GN=yjbN PE=3 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>I4P6Y7_ECOLX (tr|I4P6Y7) tRNA-dihydrouridine synthase OS=Escherichia coli
O103:H25 str. CVM9340 GN=ECO9340_20188 PE=3 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>F4T778_ECOLX (tr|F4T778) tRNA-dihydrouridine synthase OS=Escherichia coli M605
GN=ECIG_04502 PE=3 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L3K4N5_ECOLX (tr|L3K4N5) tRNA-dihydrouridine synthase OS=Escherichia coli KTE47
GN=A1S3_00010 PE=3 SV=1
Length = 345
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>F5RX02_9ENTR (tr|F5RX02) tRNA-dihydrouridine synthase OS=Enterobacter hormaechei
ATCC 49162 GN=dusA PE=3 SV=1
Length = 331
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/303 (47%), Positives = 184/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R R +S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRQLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPAALAQCAKLAEERGYDEINLNVGCPSDRVQ-NGMFGACLMGNAHLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
+VPV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSVPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGITS+DE A E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVYQLKRDFPHLTMSINGGITSLDEAKAHLEH-MDGVMVGREAYQNPG-ILATV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L G Y GH I + +L LF PG
Sbjct: 248 DREIFGVEGADTDPVAVVRAMYPYIERELSNGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>A6WJE2_SHEB8 (tr|A6WJE2) tRNA-dihydrouridine synthase OS=Shewanella baltica
(strain OS185) GN=Shew185_0774 PE=3 SV=1
Length = 339
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 194/312 (62%), Gaps = 11/312 (3%)
Query: 49 KGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFL 108
+G+ P L FS+APM++WTD HYR ARL+S +A LYTEM+ I++ + + +L
Sbjct: 10 QGLAPKT-LDRTFSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRGD---YL 65
Query: 109 AFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLD 168
A++ ++HP+ LQ+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG LM +
Sbjct: 66 AYNQEEHPLALQLGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAE 124
Query: 169 PKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKAL 228
P+ VAE + A+ ++PV+VK RIG+D+ DSY L FI VS+ T F IH+RKA
Sbjct: 125 PELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTIHARKAW 183
Query: 229 LNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRA 288
L G+SP ENR IPPL YE Y L RD+P L INGG+T++++ A GVM+GR
Sbjct: 184 LQGLSPKENREIPPLDYERVYQLKRDYPTLNIGINGGVTTLEQA-QLHLAQLDGVMMGRE 242
Query: 289 AYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNL 348
AY NP+ IL VD V+ G+ ++R V+E + Y ++ L G + I + ++ L
Sbjct: 243 AYQNPY-ILAQVDQVLCGSQKAVISREDVIEAMLPYIEAHLQSGGR---LNHITRHMIGL 298
Query: 349 FHSAPGNGLWKR 360
F PG W+R
Sbjct: 299 FQGLPGARAWRR 310
>M8KXT4_ECOLX (tr|M8KXT4) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli MP021552.7 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+++ V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKTNQTSVMPEKTGAYWSSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH P
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHIP- 300
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
+ +L LF PG W+R
Sbjct: 301 -----RHMLGLFQGIPGARQWRR 318
>C4B1A0_BURML (tr|C4B1A0) tRNA-dihydrouridine synthase A OS=Burkholderia mallei
GB8 horse 4 GN=dusA PE=4 SV=1
Length = 439
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 196/327 (59%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 109 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 166
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 167 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 225
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 226 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 284
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 285 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLR-HVDGVMLGREAYHNPY-VL 342
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 343 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 399
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 400 WRRVLSDNKRLGRGDLSIFDEARTHLP 426
>N4P9U3_ECOLX (tr|N4P9U3) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli P0301867.7 GN=dusA PE=4 SV=1
Length = 345
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H+R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHFRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I + +L LF PG
Sbjct: 262 DREIFGSSDIDADPVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>B3IGP1_ECOLX (tr|B3IGP1) tRNA-dihydrouridine synthase OS=Escherichia coli
E110019 GN=dusA PE=3 SV=1
Length = 339
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+VLQ
Sbjct: 22 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVVLQ 78
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 79 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNTQLVADCVKAMR 137
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 138 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 197
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 198 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 255
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I + +L LF PG
Sbjct: 256 DREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 309
Query: 358 WKR 360
W+R
Sbjct: 310 WRR 312
>M8W4Y3_ECOLX (tr|M8W4Y3) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli 2851500 GN=dusA PE=4 SV=1
Length = 330
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H+R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 13 FSVAPMLDWTDRHFRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 69
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 70 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 128
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 129 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 188
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 189 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 246
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I + +L LF PG
Sbjct: 247 DREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 300
Query: 358 WKR 360
W+R
Sbjct: 301 WRR 303
>D6DPU5_ENTCL (tr|D6DPU5) tRNA-dihydrouridine synthase OS=Enterobacter cloacae
GN=ENC_04800 PE=3 SV=1
Length = 331
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 182/300 (60%), Gaps = 9/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R R +S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRQLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPAALAQCAKLAEERGYDEINLNVGCPSDRVQ-NGMFGACLMGNAHLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGITS+DE A E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVYQLKRDFPHLTMSINGGITSLDEAKAHLEH-MDGVMVGREAYQNPG-ILATV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D I+G V+ Y + L H + I + +L LF PG W+R
Sbjct: 248 DREIFGVDGADTDPVAVVRAMYPYIEREL---SHGTYLGHITRHMLGLFQGIPGARQWRR 304
>G6E0K2_9GAMM (tr|G6E0K2) tRNA-dihydrouridine synthase OS=Shewanella baltica
OS625 GN=Sbal625DRAFT_2552 PE=3 SV=1
Length = 334
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/300 (44%), Positives = 189/300 (63%), Gaps = 10/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD HYR ARL+S +A LYTEM+ I++ + + +LA++ ++HP+ LQ
Sbjct: 16 FSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRGD---YLAYNQEEHPLALQ 72
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGSN LA+ +LA GYDE+NLN GCPS +V +G FG LM +P+ VAE + A+
Sbjct: 73 LGGSNPVDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPELVAECVDAMK 131
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+D+ DSY L FI VS+ T F IH+RKA L G+SP ENR I
Sbjct: 132 QVVDIPVTVKTRIGIDEQDSYAFLTQFIDVVSAKGCTD-FTIHARKAWLQGLSPKENREI 190
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL YE Y L RD+P L INGG+T++++ A GVM+GR AY NP+ IL V
Sbjct: 191 PPLDYERVYQLKRDYPTLNIGINGGVTTLEQA-QLHLAQLDGVMMGREAYQNPY-ILAQV 248
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D V+ G+ ++R V+E + Y ++ L G + I + ++ LF PG W+R
Sbjct: 249 DQVLCGSQKAVISREDVIEAMLPYIEAHLQSGGR---LNHITRHMIGLFQGLPGARAWRR 305
>B7CTP2_BURPE (tr|B7CTP2) tRNA-dihydrouridine synthase A OS=Burkholderia
pseudomallei 576 GN=dusA PE=4 SV=1
Length = 439
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 196/327 (59%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 109 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 166
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 167 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 225
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 226 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 284
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 285 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLR-HVDGVMLGREAYHNPY-VL 342
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 343 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 399
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 400 WRRVLSDNKRLGRGDLSIFDEARTHLP 426
>A1V487_BURMS (tr|A1V487) tRNA-dihydrouridine synthase A OS=Burkholderia mallei
(strain SAVP1) GN=dusA PE=4 SV=1
Length = 436
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 196/327 (59%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 106 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 163
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 164 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 222
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 223 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 281
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 282 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLR-HVDGVMLGREAYHNPY-VL 339
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 340 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 396
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 397 WRRVLSDNKRLGRGDLSIFDEARTHLP 423
>C5NK83_BURML (tr|C5NK83) tRNA-dihydrouridine synthase A OS=Burkholderia mallei
PRL-20 GN=dusA PE=4 SV=1
Length = 436
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 196/327 (59%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 106 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 163
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 164 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 222
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 223 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 281
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 282 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLR-HVDGVMLGREAYHNPY-VL 339
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 340 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 396
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 397 WRRVLSDNKRLGRGDLSIFDEARTHLP 423
>Q13ZK1_BURXL (tr|Q13ZK1) tRNA-dihydrouridine synthase OS=Burkholderia xenovorans
(strain LB400) GN=Bxeno_A1950 PE=3 SV=1
Length = 333
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 196/327 (59%), Gaps = 9/327 (2%)
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP 112
P P SVAPMM+WTD H R+L R+IS+H WLYTEM+ +++ ++ R LAF+P
Sbjct: 4 PRIPSPRRVSVAPMMDWTDRHCRSLHRVISRHTWLYTEMVTTGALLH--GDVPRHLAFTP 61
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
+ P+ LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ V
Sbjct: 62 VEAPVALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 120
Query: 173 AEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGI 232
A+ + A+ +VPV+VK RIGVD + Y + DF+ ++ + FI+H+R A+L G+
Sbjct: 121 ADCVKAMRDAVSVPVTVKHRIGVDAVEEYGFVRDFVGTIAD-AGCNVFIVHARNAILKGL 179
Query: 233 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
SP ENR IPPLKY+Y Y L RDFP L INGGI ++DEV + GVM+GR AY+N
Sbjct: 180 SPKENREIPPLKYDYAYQLKRDFPHLEIIINGGIKTLDEVETHLQH-VDGVMLGREAYHN 238
Query: 293 PWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSA 352
P+ +L VD YG+ LTR QV K I Y + + + + + I + L L+
Sbjct: 239 PY-LLAGVDARFYGSADTPLTREQVEAKLIDYCAAEMARGTY---LGAITRHALGLYRGE 294
Query: 353 PGNGLWKRKADAAFRHCTTIKSFFEET 379
G W+R + R S F+E
Sbjct: 295 AGARGWRRVLSDSKRLAARDLSIFDEA 321
>C4KX83_BURPE (tr|C4KX83) tRNA-dihydrouridine synthase A OS=Burkholderia
pseudomallei MSHR346 GN=GBP346_A1866 PE=4 SV=1
Length = 439
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 198/335 (59%), Gaps = 23/335 (6%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 109 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 166
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 167 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 225
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 226 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 284
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 285 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLR-HVDGVMLGREAYHNPY-VL 342
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 343 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 399
Query: 358 WKRKA--------------DAAFRHCTTIKSFFEE 378
W+R D A H T + FFE+
Sbjct: 400 WRRVLSDNKRLGRGDLSIFDEARTHLTHPEEFFEK 434
>Q3JSR2_BURP1 (tr|Q3JSR2) Dihydrouridine synthase OS=Burkholderia pseudomallei
(strain 1710b) GN=BURPS1710b_1996 PE=4 SV=1
Length = 442
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 198/335 (59%), Gaps = 23/335 (6%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 112 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 169
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 170 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 228
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 229 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 287
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 288 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 345
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 346 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 402
Query: 358 WKRKA--------------DAAFRHCTTIKSFFEE 378
W+R D A H T + FFE+
Sbjct: 403 WRRVLSDNKRLGRGDLSIFDEARTHLTRPEEFFEK 437
>I2IL36_9BURK (tr|I2IL36) tRNA-dihydrouridine synthase OS=Burkholderia sp. Ch1-1
GN=BCh11DRAFT_06960 PE=3 SV=1
Length = 333
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 195/327 (59%), Gaps = 9/327 (2%)
Query: 53 PNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSP 112
P P SVAPMM+WTD H R+L R+IS+H WLYTEM+ +++ ++ R LAF+P
Sbjct: 4 PRIPSPRRVSVAPMMDWTDRHCRSLHRVISRHTWLYTEMVTTGALLH--GDVPRHLAFTP 61
Query: 113 DQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 172
+ P+ LQ+GGS + LA++ +L +GYDEINLNCGCPS +V G FG LM +P+ V
Sbjct: 62 AEAPVALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 120
Query: 173 AEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGI 232
A+ + A+ +VPV+VK RIGVD + Y + DF+ ++ + FI+H+R A+L G+
Sbjct: 121 ADCVKAMRDAVSVPVTVKHRIGVDAVEEYGFVRDFVGTIAD-AGCNVFIVHARNAILKGL 179
Query: 233 SPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNN 292
SP ENR IPPLKY+Y Y L RDFP L INGGI ++DEV + GVM+GR AY+N
Sbjct: 180 SPKENREIPPLKYDYAYQLKRDFPHLEIIINGGIKTLDEVETHLQH-VDGVMLGREAYHN 238
Query: 293 PWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSA 352
P+ L VD YG+ LTR QV K I Y + + + + + I + L L+
Sbjct: 239 PYR-LADVDARFYGSTDSPLTREQVEAKLIDYCAAEMARGTY---LGAITRHALGLYRGE 294
Query: 353 PGNGLWKRKADAAFRHCTTIKSFFEET 379
G W+R + R S F+E
Sbjct: 295 AGARGWRRVLSDSKRLAARDLSIFDEA 321
>H7EFI2_SALHO (tr|H7EFI2) tRNA-dihydrouridine synthase OS=Salmonella enterica
subsp. houtenae str. ATCC BAA-1581 GN=SEHO0A_04313 PE=3
SV=1
Length = 339
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 188/305 (61%), Gaps = 19/305 (6%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S+ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 22 FSVAPMLDWTDRHCRYFLRLLSRQTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 78
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ +LA +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 79 LGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCIKAMR 137
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 138 DVVSIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWLSGLSPKENREI 197
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY--GVMVGRAAYNNPWHILG 298
PPL Y Y L RDFP LT +INGGI S++E A+E Y GVMVGR AY NP IL
Sbjct: 198 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEE---AKEHLRYMDGVMVGREAYQNP-GILA 253
Query: 299 HVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGN 355
VD I+GA + V+ Y + L G Y GH I + +L LF PG
Sbjct: 254 AVDREIFGADTTDADPVVVVRAMYPYIERELSQGAYLGH------ITRHMLGLFQGVPGA 307
Query: 356 GLWKR 360
W+R
Sbjct: 308 RQWRR 312
>Q22A31_TETTS (tr|Q22A31) TIM-barrel protein, yjbN family OS=Tetrahymena
thermophila (strain SB210) GN=TTHERM_01289100 PE=4 SV=3
Length = 466
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 198/319 (62%), Gaps = 17/319 (5%)
Query: 62 SVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQI 121
+VAPM++ TD H+R RL+++++ LYTEM+ + + + FL F P QHP+V+Q+
Sbjct: 91 AVAPMIDITDVHFRNFIRLLTRYSILYTEMIHEQAVHHNIRGPQEFLRFDPVQHPVVIQL 150
Query: 122 GGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAA 181
GG++ + LAKA ++ GYDE+NLN GCPS +V G FG LM +P+ VAE M +
Sbjct: 151 GGNDPDNLAKAAKICEEIGYDEVNLNVGCPSDRVQS-GKFGACLMKEPELVAEIMRKMKE 209
Query: 182 NTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIP 241
++PV+VKCR+GVD+ DSY+ DFI VS +HF++H+RKA L G++PA+NR++P
Sbjct: 210 ACSIPVTVKCRLGVDNFDSYEFARDFIKTVSEKGQVQHFVVHARKAFLKGLNPAQNRNVP 269
Query: 242 PLKYEYFYGLLRDFPDLTFTINGGITSVDEV--YAAREAGAYGVMVGRAAYNNPWHILGH 299
PLKY+Y L ++FP L F+INGG + D++ +E G +G M+GRAAY PW +
Sbjct: 270 PLKYDYVLRLKQEFPHLHFSINGGFKTYDQISDILKQENGLHGCMLGRAAYETPW-LFSD 328
Query: 300 VDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVR--DIVKPLLNLFHSAPGNGL 357
+D +G + +RR++L+ + YG V+ + +P + + KP++NLF
Sbjct: 329 MDRRYFGKQNPGFSRREILQIWGQYGKLVIQQ---QPAISIPTLNKPIINLFAG------ 379
Query: 358 WKRKADAAFRHCTTIKSFF 376
K A +RH + ++ F
Sbjct: 380 --EKHSAKYRHFISDRANF 396
>D4ZFH6_SHEVD (tr|D4ZFH6) tRNA-dihydrouridine synthase OS=Shewanella violacea
(strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
GN=dusA PE=3 SV=1
Length = 329
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 195/313 (62%), Gaps = 10/313 (3%)
Query: 48 DKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRF 107
D +P + FS+APM++WTD HYR LAR++S LYTEM+ I++ + + +
Sbjct: 2 DMQFMPVRKINRTFSIAPMLDWTDRHYRYLARIMSTELLLYTEMVTTGAIIHGKGD---Y 58
Query: 108 LAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLML 167
LA++ +++P+ LQ+GGSN LA +LA GYDEINLN GCPS +V G FG LM
Sbjct: 59 LAYNSEENPLALQLGGSNHHDLATCAKLAAERGYDEINLNVGCPSDRVQS-GRFGACLMA 117
Query: 168 DPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKA 227
+PK VAE ++A+ ++PV+VK RIG+DD DSY+ L +F+ VS + FI+H+RKA
Sbjct: 118 EPKLVAECVTAMKQVVDIPVTVKTRIGIDDQDSYEFLSEFVDTVSDVG-CDTFIVHARKA 176
Query: 228 LLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGR 287
L G+SP +NR IPPL Y+ Y L +D+PDL +INGG+ ++DE + + GVMVGR
Sbjct: 177 WLQGLSPKQNREIPPLDYQRVYRLKKDYPDLHISINGGVKTLDECHEHLQH-IDGVMVGR 235
Query: 288 AAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLN 347
AY NP+ IL VD + G+ L+R VL+K+I Y + L G + I + +
Sbjct: 236 EAYQNPY-ILAEVDQRLCGSNKPVLSRDAVLDKFIPYIEKHLMDGGR---LNHITRHMTG 291
Query: 348 LFHSAPGNGLWKR 360
++ PG+ W+R
Sbjct: 292 MYQGEPGSRAWRR 304
>E1P3H6_NEILA (tr|E1P3H6) tRNA-dihydrouridine synthase OS=Neisseria lactamica
Y92-1009 GN=NLY_13520 PE=3 SV=1
Length = 336
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 189/312 (60%), Gaps = 8/312 (2%)
Query: 57 LPPW-FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
LPP SVAPM++WTD HYR +AR I+++ WLY+EM+ A IVY + DRFL F+ +
Sbjct: 8 LPPRRLSVAPMLDWTDRHYRYMARQITRNTWLYSEMVNAGAIVY--GDKDRFLMFNEGEQ 65
Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
P+ LQ+GGS+ LAKA + AYGY+E+NLNCGCPSP+V G FG LM + VA+
Sbjct: 66 PVALQLGGSDPSDLAKAAKAVEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGLVADC 124
Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
++A+ +PV+VK RIGVD Y + DF+ + + K FI+H+R A L+G+SP
Sbjct: 125 LNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWLDGLSPK 184
Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
ENR +PPLKY+Y Y L ++FPDL INGGIT+ +E A GVMVGR AY+NP
Sbjct: 185 ENRDVPPLKYDYVYRLKQEFPDLEIIINGGITA-NEAIAGHLQHVDGVMVGREAYHNP-M 242
Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGN 355
++ D + YG + +++ Y + + + G +R IV+ L L H
Sbjct: 243 VMREWDRLFYGDTRSPIEYADLVQLLYTYSQAQI-QAGRGTILRHIVRHSLGLMHGLKNA 301
Query: 356 GLWKRK-ADAAF 366
W+R +DAA
Sbjct: 302 RTWRRMLSDAAL 313
>H5J9X2_ECOLX (tr|H5J9X2) tRNA-dihydrouridine synthase OS=Escherichia coli DEC12B
GN=yjbN PE=3 SV=1
Length = 345
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FS+APM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSIAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A+GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEAHGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>K9V4K3_9CYAN (tr|K9V4K3) tRNA-dihydrouridine synthase OS=Calothrix sp. PCC 6303
GN=Cal6303_3214 PE=3 SV=1
Length = 340
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 189/300 (63%), Gaps = 9/300 (3%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
SVAPMM+ TD H+R R I++H LYTEM+ I++ + + L FSP++ P+VLQ
Sbjct: 23 ISVAPMMDRTDRHFRYFMRQITQHTLLYTEMVTTAAIIH--GDREHLLGFSPEEKPLVLQ 80
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GG N ++LAK +A GYDEINLN GCPS +V G FG LM+ P+ VA+ ++A+
Sbjct: 81 VGGDNPQELAKCARIAEDMGYDEINLNVGCPSSRVQD-GNFGACLMMQPEKVADCVAAMV 139
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
A N+P+SVK RIGVDD DSY+ + F+ ++ LS K F +H+RKA L G+SP ENR I
Sbjct: 140 AAVNIPISVKHRIGVDDVDSYENMAAFVNAIA-LSGCKVFNVHARKAWLKGLSPKENRDI 198
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL+Y + L DFPDL INGG+T++ +V E+ VM+GRAAYNNP+ + V
Sbjct: 199 PPLRYADVHRLKADFPDLFIEINGGLTNLAQVQEQLES-VDAVMIGRAAYNNPY-LFSQV 256
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKR 360
D+ YG + TR QV+E + Y D K G + + I + +L LF PG+ WK+
Sbjct: 257 DSQFYGDENIPRTRHQVVEAMLPYVDKWTAK-GLK--LHKITRHMLQLFAGKPGSRAWKQ 313
>C5ZFJ9_BURPE (tr|C5ZFJ9) tRNA-dihydrouridine synthase A OS=Burkholderia
pseudomallei 1106b GN=dusA PE=4 SV=1
Length = 439
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 198/335 (59%), Gaps = 23/335 (6%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 109 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 166
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 167 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 225
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ F++H+R A+L G+SP EN
Sbjct: 226 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAAAG-CDVFVVHARNAILKGLSPKEN 284
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 285 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLR-HVDGVMLGREAYHNPY-VL 342
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 343 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 399
Query: 358 WKRKA--------------DAAFRHCTTIKSFFEE 378
W+R D A H T + FFE+
Sbjct: 400 WRRVLSDNKRLGRGDLSIFDEARTHLTHPEEFFEK 434
>A4LQ67_BURPE (tr|A4LQ67) tRNA-dihydrouridine synthase OS=Burkholderia
pseudomallei 305 GN=dusA PE=3 SV=1
Length = 379
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 199/335 (59%), Gaps = 23/335 (6%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 49 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 106
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 107 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 165
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 166 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 224
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 225 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 282
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 283 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 339
Query: 358 WKRKA--------------DAAFRHCTTIKSFFEE 378
W+R D A H T + FFE+
Sbjct: 340 WRRVLSDNKRLGRGDLSIFDEARTHLTHPEEFFEK 374
>F8VMJ2_SALBC (tr|F8VMJ2) tRNA-dihydrouridine synthase OS=Salmonella bongori
(strain ATCC 43975 / DSM 13772 / NCTC 12419) GN=yjbN
PE=3 SV=1
Length = 381
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/324 (45%), Positives = 194/324 (59%), Gaps = 22/324 (6%)
Query: 45 QSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQ 101
++H +P W FSVAPM++WTD H R RL+S LYTEM+ I++ +
Sbjct: 45 KTHQTSTIPAKTDNHWNGRFSVAPMLDWTDRHCRYFLRLLSHQTLLYTEMVTTGAIIHGK 104
Query: 102 DNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCF 161
+ +LA+S ++HP+ LQ+GGS+ +LA +LA A GYDEINLN GCPS +V +G F
Sbjct: 105 GD---YLAYSEEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQ-NGLF 160
Query: 162 GVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFI 221
G LM + + VA+++ A+ ++PV+VK RIG+DD DSY LCDFI VS + FI
Sbjct: 161 GACLMGNAQLVADSIKAMRDVVSIPVTVKTRIGIDDQDSYAFLCDFINTVSGRGECETFI 220
Query: 222 IHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAY 281
IH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S+ E A+E Y
Sbjct: 221 IHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTLSINGGIKSLAE---AKEHLKY 277
Query: 282 --GVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRP 336
GVMVGR AY NP IL VD I+GA + + V+ Y + L G Y GH
Sbjct: 278 MDGVMVGREAYQNPG-ILAAVDREIFGADTAEVDPVAVVRAMYPYIERELSQGTYLGH-- 334
Query: 337 TVRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 335 ----ITRHMLGLFQGIPGARQWRR 354
>Q0SXR6_SHIF8 (tr|Q0SXR6) tRNA-dihydrouridine synthase OS=Shigella flexneri
serotype 5b (strain 8401) GN=yjbN PE=3 SV=1
Length = 347
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 30 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 86
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 87 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 145
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 146 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 205
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 206 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 263
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 264 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 317
Query: 358 WKR 360
W+R
Sbjct: 318 WRR 320
>D2ADF9_SHIF2 (tr|D2ADF9) tRNA-dihydrouridine synthase OS=Shigella flexneri
serotype X (strain 2002017) GN=dusA PE=3 SV=1
Length = 347
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 30 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 86
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 87 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 145
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 146 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 205
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 206 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 263
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 264 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 317
Query: 358 WKR 360
W+R
Sbjct: 318 WRR 320
>I0VJR2_SHIFL (tr|I0VJR2) tRNA-dihydrouridine synthase OS=Shigella flexneri 5a
str. M90T GN=yjbN PE=3 SV=1
Length = 347
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 30 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 86
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 87 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 145
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 146 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 205
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 206 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 263
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 264 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 317
Query: 358 WKR 360
W+R
Sbjct: 318 WRR 320
>F5N826_SHIFL (tr|F5N826) tRNA-dihydrouridine synthase OS=Shigella flexneri VA-6
GN=dusA PE=3 SV=1
Length = 347
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 30 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 86
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 87 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 145
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 146 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 205
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 206 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 263
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 264 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 317
Query: 358 WKR 360
W+R
Sbjct: 318 WRR 320
>F4V980_ECOLX (tr|F4V980) tRNA-dihydrouridine synthase OS=Escherichia coli TA280
GN=ECNG_04326 PE=3 SV=1
Length = 345
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ + V+ Y + L G Y GH I + +L LF PG
Sbjct: 262 DREIFGSSDTDVDPVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>B8KHI9_9GAMM (tr|B8KHI9) tRNA-dihydrouridine synthase OS=gamma proteobacterium
NOR5-3 GN=NOR53_1111 PE=3 SV=1
Length = 343
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 196/319 (61%), Gaps = 14/319 (4%)
Query: 45 QSHDKGVLPNYYLPPW-FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDN 103
++ D+ + PW F APMM+W++ H R RL+S+HA LYTEM+ +++ +
Sbjct: 8 KTTDRSEVTARETSPWRFCTAPMMDWSNRHCRYFWRLLSQHARLYTEMVTTGALIH--GD 65
Query: 104 LDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGV 163
RFL F+ ++ PI LQ+GGSN + LA+ A A+GYDE+NLNCGCPS +V +G FG
Sbjct: 66 RQRFLQFNAEETPIALQLGGSNPDDLARCAAWAEAWGYDEVNLNCGCPSDRVQ-NGAFGA 124
Query: 164 SLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIH 223
LM +P+ V +A+SA+ + + V+VK RIG+D +SY+ELC F+ V+ FI+H
Sbjct: 125 CLMAEPELVRDAVSAMRSACEIDVTVKHRIGIDHMESYEELCHFVGTVAD-GGCSVFIVH 183
Query: 224 SRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVD--EVYAAREAGAY 281
+RKA L G+SP ENR +PPL Y + Y L RDFP LT INGGI S+D E + AR
Sbjct: 184 ARKAWLKGLSPKENREVPPLTYPWVYRLKRDFPALTIVINGGIESIDDCEPHLAR---VD 240
Query: 282 GVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDI 341
GVM+GR+AY+NPW +L VD ++G P R +++ + Y + L G R + I
Sbjct: 241 GVMLGRSAYHNPW-VLAEVDRRLFGEPQQPRCREDIIDALMPYVEKELAS-GTR--LNQI 296
Query: 342 VKPLLNLFHSAPGNGLWKR 360
+ +L L+ PG ++R
Sbjct: 297 TRHILGLYQEVPGAKRYRR 315
>F4VPB9_ECOLX (tr|F4VPB9) tRNA-dihydrouridine synthase OS=Escherichia coli H299
GN=ECOG_02139 PE=3 SV=1
Length = 345
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDIDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>M9A6X2_ECOLX (tr|M9A6X2) tRNA dihydrouridine synthase A family protein
OS=Escherichia coli 2780750 GN=dusA PE=4 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 187/303 (61%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I + +L LF PG
Sbjct: 262 DREIFGSSDTDADLVAVVRAMYPYIERELSQGTYLGH------ITRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>J2YW27_SHIFL (tr|J2YW27) tRNA-dihydrouridine synthase OS=Shigella flexneri
6603-63 GN=yjbN PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>I6GCN6_SHIFL (tr|I6GCN6) tRNA-dihydrouridine synthase OS=Shigella flexneri
1235-66 GN=SF123566_5734 PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>I6CSF3_SHIFL (tr|I6CSF3) tRNA-dihydrouridine synthase OS=Shigella flexneri K-404
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>I6BFI6_SHIFL (tr|I6BFI6) tRNA-dihydrouridine synthase OS=Shigella flexneri
K-1770 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>I6BCU1_SHIFL (tr|I6BCU1) tRNA-dihydrouridine synthase OS=Shigella flexneri
2850-71 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F7RGW0_SHIFL (tr|F7RGW0) tRNA-dihydrouridine synthase OS=Shigella flexneri J1713
GN=yjbN PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5R3Y6_SHIFL (tr|F5R3Y6) tRNA-dihydrouridine synthase OS=Shigella flexneri
2930-71 GN=yjbN PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5QPS0_SHIFL (tr|F5QPS0) tRNA-dihydrouridine synthase OS=Shigella flexneri
4343-70 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5QB61_SHIFL (tr|F5QB61) tRNA-dihydrouridine synthase OS=Shigella flexneri
2747-71 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5PWS3_SHIFL (tr|F5PWS3) tRNA-dihydrouridine synthase OS=Shigella flexneri K-671
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5PH02_SHIFL (tr|F5PH02) tRNA-dihydrouridine synthase OS=Shigella flexneri K-304
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5P0P3_SHIFL (tr|F5P0P3) tRNA-dihydrouridine synthase OS=Shigella flexneri K-227
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5NM09_SHIFL (tr|F5NM09) tRNA-dihydrouridine synthase OS=Shigella flexneri K-272
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>F5MSX4_SHIFL (tr|F5MSX4) tRNA-dihydrouridine synthase OS=Shigella flexneri K-218
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>E3Y4D3_SHIFL (tr|E3Y4D3) tRNA-dihydrouridine synthase OS=Shigella flexneri 2a
str. 2457T GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FSVAPM++WTD H R RL+S++ LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 28 FSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 84
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ LA+ +LA A GYDEINLN GCPS +V +G FG LM + + VA+ + A+
Sbjct: 85 LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAQLVADCVKAMR 143
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 144 DVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREI 203
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y Y L RDFP LT +INGGI S++E A + GVMVGR AY NP IL V
Sbjct: 204 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPG-ILAAV 261
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G+ V+ Y + L G Y GH I++ +L LF PG
Sbjct: 262 DREIFGSSDTDADPVAVVRAMYPYIEHELSQGTYLGH------IIRHMLGLFQGIPGARQ 315
Query: 358 WKR 360
W+R
Sbjct: 316 WRR 318
>Q62K63_BURMA (tr|Q62K63) tRNA-dihydrouridine synthase OS=Burkholderia mallei
(strain ATCC 23344) GN=BMA1227 PE=3 SV=1
Length = 339
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 197/327 (60%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 300 WRRVLSDNKRLGRGDLSIFDEARTHLP 326
>A3MJB7_BURM7 (tr|A3MJB7) tRNA-dihydrouridine synthase OS=Burkholderia mallei
(strain NCTC 10247) GN=dusA PE=3 SV=1
Length = 339
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 197/327 (60%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 300 WRRVLSDNKRLGRGDLSIFDEARTHLP 326
>A2S354_BURM9 (tr|A2S354) tRNA-dihydrouridine synthase OS=Burkholderia mallei
(strain NCTC 10229) GN=dusA PE=3 SV=1
Length = 339
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 197/327 (60%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 300 WRRVLSDNKRLGRGDLSIFDEARTHLP 326
>A5XPN4_BURML (tr|A5XPN4) tRNA-dihydrouridine synthase OS=Burkholderia mallei JHU
GN=dusA PE=3 SV=1
Length = 339
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 197/327 (60%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 300 WRRVLSDNKRLGRGDLSIFDEARTHLP 326
>A5XG28_BURML (tr|A5XG28) tRNA-dihydrouridine synthase OS=Burkholderia mallei FMH
GN=dusA PE=3 SV=1
Length = 339
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 197/327 (60%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 300 WRRVLSDNKRLGRGDLSIFDEARTHLP 326
>A5TLF2_BURML (tr|A5TLF2) tRNA-dihydrouridine synthase OS=Burkholderia mallei
2002721280 GN=dusA PE=3 SV=1
Length = 339
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 197/327 (60%), Gaps = 9/327 (2%)
Query: 58 PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPI 117
P SVAPMM+WTD H R+ R IS+HAWLYTEM+ +++ ++ R LAF+PD+ P+
Sbjct: 9 PRRVSVAPMMDWTDRHCRSFHRTISRHAWLYTEMVTTGALIH--GDVARHLAFTPDEAPV 66
Query: 118 VLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMS 177
LQ+GGS LA + +L +GYDEINLNCGCPS +V G FG LM +P+ VA+ +
Sbjct: 67 ALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADCVK 125
Query: 178 AIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAEN 237
A+ ++PV+VK RIGVD + Y + DF+ V++ + F++H+R A+L G+SP EN
Sbjct: 126 AMRDAVSIPVTVKHRIGVDAVEDYAFVRDFVGTVAA-AGCDVFVVHARNAILKGLSPKEN 184
Query: 238 RSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHIL 297
R IPPLKY+Y Y L RDFP + INGG+T++DEV GVM+GR AY+NP+ +L
Sbjct: 185 REIPPLKYDYAYRLKRDFPQIEIVINGGVTTLDEVEQHLRH-VDGVMLGREAYHNPY-VL 242
Query: 298 GHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGL 357
+D YGA + + TR +V K + Y + L + + + IV+ L L+ G
Sbjct: 243 AGIDARFYGASAPAPTREEVEAKLVEYCAAELARGTY---LGAIVRHALGLYRGVAGARG 299
Query: 358 WKRKADAAFRHCTTIKSFFEETLVAIP 384
W+R R S F+E +P
Sbjct: 300 WRRVLSDNKRLGRGDLSIFDEARTHLP 326
>D3RG56_KLEVT (tr|D3RG56) tRNA-dihydrouridine synthase OS=Klebsiella variicola
(strain At-22) GN=Kvar_4812 PE=3 SV=1
Length = 331
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 184/303 (60%), Gaps = 15/303 (4%)
Query: 61 FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQ 120
FS+APM++WTD H R RL+S+H LYTEM+ I++ + + +LA+S ++HP+ LQ
Sbjct: 14 FSIAPMLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGD---YLAYSEEEHPVALQ 70
Query: 121 IGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIA 180
+GGS+ + LA+ +LA A GYDEINLN GCPS +V +G FG LM + VA+ + A+
Sbjct: 71 LGGSDPQALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGMFGACLMGNAPLVADCIKAMR 129
Query: 181 ANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSI 240
++PV+VK RIG+DD DSY+ LCDFI VS + FIIH+RKA L+G+SP ENR I
Sbjct: 130 DVVSIPVTVKTRIGIDDQDSYEFLCDFIETVSGKGECEMFIIHARKAWLSGLSPKENREI 189
Query: 241 PPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHV 300
PPL Y + L RDFP LT INGGI S+DE E GVMVGR AY NP IL V
Sbjct: 190 PPLDYPRVWQLKRDFPHLTMAINGGIKSLDEARLQLEH-MDGVMVGREAYQNPG-ILASV 247
Query: 301 DTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPTVRDIVKPLLNLFHSAPGNGL 357
D I+G V+ Y + L G Y GH I + +L LF PG
Sbjct: 248 DREIFGIAGADADPVAVVRAMYPYIERELSNGTYLGH------ITRHMLGLFQGIPGARQ 301
Query: 358 WKR 360
W+R
Sbjct: 302 WRR 304
>L9GL24_ECOLX (tr|L9GL24) tRNA-dihydrouridine synthase OS=Escherichia coli
99.1762 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L9G2X5_ECOLX (tr|L9G2X5) tRNA-dihydrouridine synthase OS=Escherichia coli 7.1982
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L9FDH6_ECOLX (tr|L9FDH6) tRNA-dihydrouridine synthase OS=Escherichia coli PA8
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L9EWF5_ECOLX (tr|L9EWF5) tRNA-dihydrouridine synthase OS=Escherichia coli PA48
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L9E8P5_ECOLX (tr|L9E8P5) tRNA-dihydrouridine synthase OS=Escherichia coli PA2
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L9DJ53_ECOLX (tr|L9DJ53) tRNA-dihydrouridine synthase OS=Escherichia coli PA13
GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L9CEN6_ECOLX (tr|L9CEN6) tRNA-dihydrouridine synthase OS=Escherichia coli ATCC
700728 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L8ZX42_ECOLX (tr|L8ZX42) tRNA-dihydrouridine synthase OS=Escherichia coli
99.0816 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L8ZAS6_ECOLX (tr|L8ZAS6) tRNA-dihydrouridine synthase OS=Escherichia coli
99.0815 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L8YI40_ECOLX (tr|L8YI40) tRNA-dihydrouridine synthase OS=Escherichia coli
99.0814 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L8YH43_ECOLX (tr|L8YH43) tRNA-dihydrouridine synthase OS=Escherichia coli
09BKT078844 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L1FVL4_ECOLX (tr|L1FVL4) tRNA-dihydrouridine synthase OS=Escherichia coli
99.0672 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L1FCM1_ECOLX (tr|L1FCM1) tRNA-dihydrouridine synthase OS=Escherichia coli
97.1742 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L1DUN9_ECOLX (tr|L1DUN9) tRNA-dihydrouridine synthase OS=Escherichia coli
96.0932 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L1D6R7_ECOLX (tr|L1D6R7) tRNA-dihydrouridine synthase OS=Escherichia coli
96.0939 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L1BAF8_ECOLX (tr|L1BAF8) tRNA-dihydrouridine synthase OS=Escherichia coli
95.0183 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318
>L0YYI5_ECOLX (tr|L0YYI5) tRNA-dihydrouridine synthase OS=Escherichia coli
90.0039 GN=dusA PE=3 SV=1
Length = 345
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 194/323 (60%), Gaps = 18/323 (5%)
Query: 44 QQSHDKGVLPNYYLPPW---FSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQ 100
Q+ + V+P W FSVAPM++WTD H R RL+S++ LYTEM+ I++
Sbjct: 8 QKINQTSVMPEKTGVYWNSRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG 67
Query: 101 QDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGC 160
+ + +LA+S ++HP+ LQ+GGS+ LA+ +LA A GYDEINLN GCPS +V +G
Sbjct: 68 KGD---YLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ-NGM 123
Query: 161 FGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHF 220
FG LM + + VA+ + A+ ++PV+VK RIG+DD DSY+ LCDFI VS + F
Sbjct: 124 FGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMF 183
Query: 221 IIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGA 280
IIH+RKA L+G+SP ENR IPPL Y Y L RDFP LT +INGGI S++E A +
Sbjct: 184 IIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-M 242
Query: 281 YGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVL--GKY-GHRPT 337
GVMVGR AY NP IL VD I+G+ V+ Y + L G Y GH
Sbjct: 243 DGVMVGREAYQNPG-ILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGH--- 298
Query: 338 VRDIVKPLLNLFHSAPGNGLWKR 360
I + +L LF PG W+R
Sbjct: 299 ---ITRHMLGLFQGIPGARQWRR 318