Miyakogusa Predicted Gene
- Lj3g3v3639960.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3639960.2 tr|Q93V67|Q93V67_9BRYO PpSIG1 OS=Physcomitrella
patens GN=Sig1 PE=2 SV=1,31.18,0.0000000000003,no description,NULL;
Sigma2 domain of RNA polymerase sigma factors,RNA polymerase sigma
factor, regi,CUFF.46126.2
(300 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1L5H2_SOYBN (tr|I1L5H2) Uncharacterized protein OS=Glycine max ... 441 e-121
I1L5H1_SOYBN (tr|I1L5H1) Uncharacterized protein OS=Glycine max ... 441 e-121
I1LP24_SOYBN (tr|I1LP24) Uncharacterized protein OS=Glycine max ... 435 e-119
B9SDF8_RICCO (tr|B9SDF8) RNA polymerase sigma factor rpoD, putat... 365 9e-99
B9IPY1_POPTR (tr|B9IPY1) Predicted protein OS=Populus trichocarp... 341 2e-91
M5X2A7_PRUPE (tr|M5X2A7) Uncharacterized protein OS=Prunus persi... 337 3e-90
Q9SLX4_TOBAC (tr|Q9SLX4) Sigma factor OS=Nicotiana tabacum GN=si... 302 1e-79
B9I6T5_POPTR (tr|B9I6T5) Predicted protein OS=Populus trichocarp... 296 4e-78
K4BJE9_SOLLC (tr|K4BJE9) Uncharacterized protein OS=Solanum lyco... 291 3e-76
D7KZ14_ARALL (tr|D7KZ14) RNA polymerase sigma subunit 1 OS=Arabi... 269 1e-69
R0GH75_9BRAS (tr|R0GH75) Uncharacterized protein OS=Capsella rub... 265 1e-68
R0IAB6_9BRAS (tr|R0IAB6) Uncharacterized protein OS=Capsella rub... 265 1e-68
M1CIG2_SOLTU (tr|M1CIG2) Uncharacterized protein OS=Solanum tube... 257 3e-66
F6HE86_VITVI (tr|F6HE86) Putative uncharacterized protein OS=Vit... 256 5e-66
M1CKN6_SOLTU (tr|M1CKN6) Uncharacterized protein OS=Solanum tube... 255 1e-65
Q9SLX3_TOBAC (tr|Q9SLX3) Sigma factor OS=Nicotiana tabacum GN=si... 254 3e-65
K4C8Z1_SOLLC (tr|K4C8Z1) Uncharacterized protein OS=Solanum lyco... 252 1e-64
O49935_SINAL (tr|O49935) Sig1 protein OS=Sinapis alba GN=Sig1 PE... 249 1e-63
M1CIG4_SOLTU (tr|M1CIG4) Uncharacterized protein OS=Solanum tube... 224 2e-56
M4CWB6_BRARP (tr|M4CWB6) Uncharacterized protein OS=Brassica rap... 224 2e-56
G3FLY2_TOBAC (tr|G3FLY2) Sigma factor (Fragment) OS=Nicotiana ta... 209 1e-51
M0RQD1_MUSAM (tr|M0RQD1) Uncharacterized protein OS=Musa acumina... 199 1e-48
K7K9J2_SOYBN (tr|K7K9J2) Uncharacterized protein OS=Glycine max ... 182 1e-43
M0RYS9_MUSAM (tr|M0RYS9) Uncharacterized protein OS=Musa acumina... 174 4e-41
Q0J7T6_ORYSJ (tr|Q0J7T6) Os08g0163400 protein OS=Oryza sativa su... 162 2e-37
O48655_ORYSJ (tr|O48655) Plastid RNA polymerase sigma factor OS=... 162 2e-37
J3MQN6_ORYBR (tr|J3MQN6) Uncharacterized protein OS=Oryza brachy... 160 4e-37
B4FP19_MAIZE (tr|B4FP19) RNA polymerase sigma factor 1 isoform 1... 160 5e-37
Q9ZTI3_MAIZE (tr|Q9ZTI3) RNA polymerase sigma factor 1 (Fragment... 160 6e-37
K7UB44_MAIZE (tr|K7UB44) RNA polymerase sigma factor 2 OS=Zea ma... 160 6e-37
K3YH90_SETIT (tr|K3YH90) Uncharacterized protein OS=Setaria ital... 158 2e-36
I1QFY1_ORYGL (tr|I1QFY1) Uncharacterized protein OS=Oryza glaber... 157 4e-36
M7Y829_TRIUA (tr|M7Y829) RNA polymerase sigma factor rpoD OS=Tri... 155 2e-35
C5YHG2_SORBI (tr|C5YHG2) Putative uncharacterized protein Sb07g0... 154 5e-35
O24348_SORBI (tr|O24348) Plastid RNA polymerase sigma factor OS=... 153 5e-35
F2DCW4_HORVD (tr|F2DCW4) Predicted protein OS=Hordeum vulgare va... 150 4e-34
F2DWX1_HORVD (tr|F2DWX1) Predicted protein OS=Hordeum vulgare va... 150 4e-34
Q9ZP70_WHEAT (tr|Q9ZP70) Chloroplast sigma factor (Fragment) OS=... 150 8e-34
A3BPX7_ORYSJ (tr|A3BPX7) Putative uncharacterized protein OS=Ory... 148 2e-33
Q7EY08_ORYSJ (tr|Q7EY08) Putative plastid RNA polymerase sigma f... 145 2e-32
A2YRJ0_ORYSI (tr|A2YRJ0) Putative uncharacterized protein OS=Ory... 139 1e-30
Q7EY07_ORYSJ (tr|Q7EY07) Putative plastid RNA polymerase sigma f... 138 2e-30
I1I198_BRADI (tr|I1I198) Uncharacterized protein OS=Brachypodium... 136 9e-30
Q9ZTI2_MAIZE (tr|Q9ZTI2) RNA polymerase sigma factor 2 (Fragment... 135 1e-29
K7L3F5_SOYBN (tr|K7L3F5) Uncharacterized protein OS=Glycine max ... 98 3e-18
M8CE31_AEGTA (tr|M8CE31) RNA polymerase sigma factor rpoD OS=Aeg... 87 7e-15
Q93V67_9BRYO (tr|Q93V67) PpSIG1 OS=Physcomitrella patens GN=Sig1... 81 4e-13
E1C9S7_PHYPA (tr|E1C9S7) Plastid sigma factor SIG1 OS=Physcomitr... 81 4e-13
M1CIG3_SOLTU (tr|M1CIG3) Uncharacterized protein OS=Solanum tube... 81 6e-13
K0ITD8_MARPO (tr|K0ITD8) Plastid RNA polymerase sigma factor 1 O... 77 7e-12
M0V4S3_HORVD (tr|M0V4S3) Uncharacterized protein OS=Hordeum vulg... 73 1e-10
Q2JRK5_SYNJA (tr|Q2JRK5) RNA polymerase sigma factor OS=Synechoc... 70 9e-10
Q9MTH3_SINAL (tr|Q9MTH3) Sigma factor 2 (Precursor) OS=Sinapis a... 69 1e-09
K4BJF0_SOLLC (tr|K4BJF0) Uncharacterized protein OS=Solanum lyco... 69 1e-09
K9YEA1_HALP7 (tr|K9YEA1) RNA polymerase sigma factor OS=Halothec... 69 2e-09
Q2JNL1_SYNJB (tr|Q2JNL1) RNA polymerase sigma factor OS=Synechoc... 68 3e-09
K9VNL0_9CYAN (tr|K9VNL0) RNA polymerase sigma factor OS=Oscillat... 67 7e-09
A5GQ42_SYNR3 (tr|A5GQ42) RNA polymerase sigma factor OS=Synechoc... 67 7e-09
B9IPZ1_POPTR (tr|B9IPZ1) Predicted protein OS=Populus trichocarp... 66 1e-08
F5UJI7_9CYAN (tr|F5UJI7) RNA polymerase sigma factor OS=Microcol... 66 2e-08
M4DQ26_BRARP (tr|M4DQ26) Uncharacterized protein OS=Brassica rap... 65 2e-08
M0TES6_MUSAM (tr|M0TES6) Uncharacterized protein OS=Musa acumina... 65 3e-08
Q8ZSA3_NOSS1 (tr|Q8ZSA3) RNA polymerase sigma factor OS=Nostoc s... 64 7e-08
K9YFR5_HALP7 (tr|K9YFR5) RNA polymerase sigma factor OS=Halothec... 64 8e-08
D7UB90_VITVI (tr|D7UB90) Putative uncharacterized protein OS=Vit... 63 1e-07
D7LJA3_ARALL (tr|D7LJA3) RNA polymerase sigma-70 factor OS=Arabi... 63 1e-07
G6FNJ2_9CYAN (tr|G6FNJ2) RNA polymerase sigma factor OS=Fischere... 63 1e-07
K9QH57_9NOSO (tr|K9QH57) RNA polymerase sigma factor OS=Nostoc s... 63 1e-07
B1X4M1_PAUCH (tr|B1X4M1) Type II alternative RNA polymerase sigm... 63 1e-07
B9SDA3_RICCO (tr|B9SDA3) RNA polymerase sigma factor rpoD1, puta... 62 2e-07
K9ZQP5_ANACC (tr|K9ZQP5) RNA polymerase sigma factor OS=Anabaena... 62 2e-07
K7W742_9NOST (tr|K7W742) RNA polymerase sigma factor OS=Anabaena... 62 2e-07
B4VH85_9CYAN (tr|B4VH85) RNA polymerase sigma factor OS=Coleofas... 62 3e-07
I1ILU6_BRADI (tr|I1ILU6) Uncharacterized protein OS=Brachypodium... 62 3e-07
K9VYT8_9CYAN (tr|K9VYT8) RNA polymerase sigma factor OS=Crinaliu... 62 3e-07
B9I6F1_POPTR (tr|B9I6F1) Predicted protein OS=Populus trichocarp... 62 3e-07
Q3ANG0_SYNSC (tr|Q3ANG0) RNA polymerase sigma factor OS=Synechoc... 62 3e-07
R0FW66_9BRAS (tr|R0FW66) Uncharacterized protein OS=Capsella rub... 62 3e-07
Q710C3_SPIOL (tr|Q710C3) Sigma factor OS=Spinacia oleracea GN=si... 61 4e-07
Q7NEW6_GLOVI (tr|Q7NEW6) RNA polymerase sigma factor OS=Gloeobac... 61 4e-07
F4XUA7_9CYAN (tr|F4XUA7) RNA polymerase sigma factor OS=Moorea p... 61 4e-07
K9V823_9CYAN (tr|K9V823) RNA polymerase sigma factor OS=Calothri... 61 4e-07
D7E5B4_NOSA0 (tr|D7E5B4) RNA polymerase sigma factor OS=Nostoc a... 61 4e-07
K0ISZ8_MARPO (tr|K0ISZ8) Plastid RNA polymerase sigma factor 2 O... 61 5e-07
Q53KH7_ORYSJ (tr|Q53KH7) Sigma-70 region 3, putative OS=Oryza sa... 61 5e-07
M0TIC0_MUSAM (tr|M0TIC0) Uncharacterized protein OS=Musa acumina... 61 5e-07
R0HNL5_9BRAS (tr|R0HNL5) Uncharacterized protein OS=Capsella rub... 61 5e-07
B8HU39_CYAP4 (tr|B8HU39) RNA polymerase sigma factor OS=Cyanothe... 60 7e-07
B2J5S6_NOSP7 (tr|B2J5S6) RNA polymerase sigma factor OS=Nostoc p... 60 8e-07
Q3MDW4_ANAVT (tr|Q3MDW4) RNA polymerase sigma factor OS=Anabaena... 60 8e-07
K9WA21_9CYAN (tr|K9WA21) RNA polymerase sigma factor OS=Microcol... 60 8e-07
K9YVD0_DACSA (tr|K9YVD0) RNA polymerase sigma factor OS=Dactyloc... 60 8e-07
M4DL32_BRARP (tr|M4DL32) Uncharacterized protein OS=Brassica rap... 60 8e-07
F2HHX7_9CRYP (tr|F2HHX7) RNA-polymerase sigma factor OS=Cryptomo... 60 9e-07
K4AY41_SOLLC (tr|K4AY41) Uncharacterized protein OS=Solanum lyco... 60 1e-06
M1D2M3_SOLTU (tr|M1D2M3) Uncharacterized protein OS=Solanum tube... 60 1e-06
I4I200_MICAE (tr|I4I200) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
Q39477_CYACA (tr|Q39477) RNA polymerase sigma factor (Fragment) ... 59 2e-06
L7E3E5_MICAE (tr|L7E3E5) RNA polymerase sigma factor OS=Microcys... 59 2e-06
I4GLZ5_MICAE (tr|I4GLZ5) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
I4FIK9_MICAE (tr|I4FIK9) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
E4MX68_THEHA (tr|E4MX68) mRNA, clone: RTFL01-17-E04 OS=Thellungi... 59 2e-06
L8NM63_MICAE (tr|L8NM63) RNA polymerase sigma factor rpoD2 OS=Mi... 59 2e-06
A8YAB5_MICAE (tr|A8YAB5) Genome sequencing data, contig C249 OS=... 59 2e-06
Q55525_SYNY3 (tr|Q55525) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
F7URP3_SYNYG (tr|F7URP3) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
E0UIU1_CYAP2 (tr|E0UIU1) RNA polymerase, sigma 70 subunit, RpoD ... 59 2e-06
M1MBB9_9SYNC (tr|M1MBB9) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
H0PFH3_9SYNC (tr|H0PFH3) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
H0PAJ0_9SYNC (tr|H0PAJ0) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
H0NY38_9SYNC (tr|H0NY38) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
I4ISK0_MICAE (tr|I4ISK0) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
I4G0I4_MICAE (tr|I4G0I4) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
M4EPL2_BRARP (tr|M4EPL2) Uncharacterized protein OS=Brassica rap... 59 2e-06
I4H5M1_MICAE (tr|I4H5M1) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
L8AT57_9SYNC (tr|L8AT57) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
B4WMN7_9SYNE (tr|B4WMN7) RNA polymerase sigma factor OS=Synechoc... 59 2e-06
R7QJX2_CHOCR (tr|R7QJX2) Stackhouse genomic scaffold, scaffold_3... 59 2e-06
M2W1U4_GALSU (tr|M2W1U4) RNA polymerase primary sigma factor OS=... 59 2e-06
I4HQ77_MICAE (tr|I4HQ77) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
I4FRP5_MICAE (tr|I4FRP5) RNA polymerase sigma factor rpoD3 OS=Mi... 59 2e-06
A9RTR6_PHYPA (tr|A9RTR6) Uncharacterized protein OS=Physcomitrel... 59 2e-06
B0JTP4_MICAN (tr|B0JTP4) Group 2 RNA polymerase sigma factor OS=... 59 2e-06
K9X9V9_9CHRO (tr|K9X9V9) RNA polymerase sigma factor OS=Gloeocap... 59 3e-06
I4GS23_MICAE (tr|I4GS23) RNA polymerase sigma factor rpoD3 OS=Mi... 59 3e-06
Q3B0L4_SYNS9 (tr|Q3B0L4) RNA polymerase sigma factor OS=Synechoc... 58 3e-06
Q062S3_9SYNE (tr|Q062S3) RNA polymerase sigma factor OS=Synechoc... 58 3e-06
K9Q243_9CYAN (tr|K9Q243) RNA polymerase sigma factor OS=Leptolyn... 58 3e-06
K9RSJ7_SYNP3 (tr|K9RSJ7) RNA polymerase sigma factor OS=Synechoc... 58 4e-06
D7KIT0_ARALL (tr|D7KIT0) Putative uncharacterized protein OS=Ara... 58 5e-06
A0YTZ3_LYNSP (tr|A0YTZ3) RNA polymerase sigma factor OS=Lyngbya ... 57 5e-06
K9ZBP9_ANACC (tr|K9ZBP9) RNA polymerase sigma factor OS=Anabaena... 57 5e-06
L8LWE0_9CYAN (tr|L8LWE0) RNA polymerase sigma factor, cyanobacte... 57 6e-06
K7KHD7_SOYBN (tr|K7KHD7) Uncharacterized protein OS=Glycine max ... 57 6e-06
I4IAS0_9CHRO (tr|I4IAS0) RNA polymerase sigma factor rpoD3 OS=Mi... 57 6e-06
J7G2H9_9CRYP (tr|J7G2H9) RNA-polymerase sigma factor OS=Chroomon... 57 7e-06
M1BY23_SOLTU (tr|M1BY23) Uncharacterized protein OS=Solanum tube... 57 7e-06
Q39515_CYACA (tr|Q39515) Chloroplast RNA polymerase sigma subuni... 57 7e-06
K9QU00_NOSS7 (tr|K9QU00) RNA polymerase sigma factor OS=Nostoc s... 57 8e-06
L8LPU5_9CHRO (tr|L8LPU5) RNA polymerase sigma factor OS=Gloeocap... 57 8e-06
K9XHA2_9CHRO (tr|K9XHA2) RNA polymerase sigma factor OS=Gloeocap... 57 8e-06
B7KAB6_CYAP7 (tr|B7KAB6) RNA polymerase, sigma 70 subunit, RpoD ... 57 8e-06
K9X1I3_9NOST (tr|K9X1I3) RNA polymerase sigma factor OS=Cylindro... 57 9e-06
K9YRT3_DACSA (tr|K9YRT3) RNA polymerase sigma factor OS=Dactyloc... 57 9e-06
J3N844_ORYBR (tr|J3N844) Uncharacterized protein OS=Oryza brachy... 57 9e-06
I1QZW7_ORYGL (tr|I1QZW7) Uncharacterized protein OS=Oryza glaber... 57 9e-06
Q53KH8_ORYSJ (tr|Q53KH8) Os11g0448400 protein OS=Oryza sativa su... 57 9e-06
B8AUZ3_ORYSI (tr|B8AUZ3) Putative uncharacterized protein OS=Ory... 57 1e-05
>I1L5H2_SOYBN (tr|I1L5H2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 468
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/297 (73%), Positives = 248/297 (83%), Gaps = 6/297 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI D+IEKLS SDFGSTHYQIVP KS+ AKKSS+YT
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPT 60
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLE 120
FPAS++ NQSIKALKEHVD P A++WFQ C+SNDLEVESS++GYSVEALLLLQKSMLE
Sbjct: 61 FPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLE 120
Query: 121 KQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQ 180
KQW+LS EREVLTEH + K KKVAVTCSGVSARQRR+NTKRK +A++ C AMQ
Sbjct: 121 KQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRK------TAIKTCGAMQ 174
Query: 181 MRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEP 240
++S ISPELLQ+R KGYVKG+VSE+LLSHAEVV LSE+IKVGLSL+EHKSRLKE+LGCEP
Sbjct: 175 LKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEP 234
Query: 241 SDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
SDDQ+A SLKISR+ELRA+ IECTLARE+LAMSNVRLVMSIAQ+YDN+GAEM DLVQ
Sbjct: 235 SDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQ 291
>I1L5H1_SOYBN (tr|I1L5H1) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 503
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/297 (73%), Positives = 248/297 (83%), Gaps = 6/297 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI D+IEKLS SDFGSTHYQIVP KS+ AKKSS+YT
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPT 60
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLE 120
FPAS++ NQSIKALKEHVD P A++WFQ C+SNDLEVESS++GYSVEALLLLQKSMLE
Sbjct: 61 FPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLE 120
Query: 121 KQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQ 180
KQW+LS EREVLTEH + K KKVAVTCSGVSARQRR+NTKRK +A++ C AMQ
Sbjct: 121 KQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRK------TAIKTCGAMQ 174
Query: 181 MRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEP 240
++S ISPELLQ+R KGYVKG+VSE+LLSHAEVV LSE+IKVGLSL+EHKSRLKE+LGCEP
Sbjct: 175 LKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEP 234
Query: 241 SDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
SDDQ+A SLKISR+ELRA+ IECTLARE+LAMSNVRLVMSIAQ+YDN+GAEM DLVQ
Sbjct: 235 SDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQ 291
>I1LP24_SOYBN (tr|I1LP24) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 503
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/297 (73%), Positives = 247/297 (83%), Gaps = 6/297 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI DIIEKLS SDFGSTHYQIVP KS+ VAKKSS+YT
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLE 120
FPAS++ NQSIKALKEHVD P A+ WFQ +SNDLEVESS++GYSVEALLLLQKSMLE
Sbjct: 61 FPASNQQNQSIKALKEHVDDAPTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQKSMLE 120
Query: 121 KQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQ 180
KQW+LS EREVLTE+ + K +KVAVTCSGVSARQRR+NTKRK +A++ C AMQ
Sbjct: 121 KQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRK------TAIKTCGAMQ 174
Query: 181 MRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEP 240
++S ISPELLQ+R KGYVKG+VSE+LLSHAEVV LSEKIKVGLSL+EHKSRLKEKLGCEP
Sbjct: 175 LKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGCEP 234
Query: 241 SDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
SDDQ+A SLKISR+ELRA+ IEC+LARE+LAMSNVRLVMSIAQ+YDN+GAEM DLVQ
Sbjct: 235 SDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQ 291
>B9SDF8_RICCO (tr|B9SDF8) RNA polymerase sigma factor rpoD, putative OS=Ricinus
communis GN=RCOM_1517450 PE=4 SV=1
Length = 508
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 192/299 (64%), Positives = 231/299 (77%), Gaps = 5/299 (1%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI D+ EKLS +++ G THYQI K++ VAKKSS+Y +
Sbjct: 1 MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60
Query: 61 FPASDRPNQSIKALKEHVD--GVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSM 118
FP+S+R QSIKALKEHVD P+ A T F+ ND+E ESSDL YSVEALLLLQKSM
Sbjct: 61 FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTF--NDMEEESSDLDYSVEALLLLQKSM 118
Query: 119 LEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDA 178
LEKQW+LS ER ++ P + KS KK+ VTCSGVSARQRRIN +RK ++ +QA
Sbjct: 119 LEKQWNLSFERTDSSDSPSR-KSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVF 177
Query: 179 MQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGC 238
Q++S +SPELLQNR KGYVKGVVSE+LLSHAEVV+LS IK GLSL++HKSRLKE+LGC
Sbjct: 178 KQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGC 237
Query: 239 EPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+PSD+Q+A SLKISR+EL++K+I C+LARE+LAMSNVRLVMSIAQRYDNMGAEMADLVQ
Sbjct: 238 DPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ 296
>B9IPY1_POPTR (tr|B9IPY1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_665539 PE=4 SV=1
Length = 509
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 223/299 (74%), Gaps = 5/299 (1%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI D+ EKLS +D G T+Y K+V VAKKSS+Y +
Sbjct: 2 MATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGPS 61
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAE--TWFQECDSNDLEVESSDLGYSVEALLLLQKSM 118
FP+S+R + SIKALKEHVD A++ TWF+ D D E ESS L YSVEALLLLQKSM
Sbjct: 62 FPSSNRNSHSIKALKEHVDTASASSNVATWFKTFD--DFEEESSALDYSVEALLLLQKSM 119
Query: 119 LEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDA 178
LEKQW+LS ER ++ +K++KK+ VTCSGVSARQRR+N +RK ++ Q+ D
Sbjct: 120 LEKQWNLSFERTNSSDST-SKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDF 178
Query: 179 MQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGC 238
+RS+ SP+LLQNR KGYVKGVVS+++L H EVV+LS I+ GLS ++HKSRLKE+LGC
Sbjct: 179 KFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGC 238
Query: 239 EPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
EPSD+QIA SL+ISR++L++K I+C+LARE+LAMSNVRLVMSIAQ+YDNMGAEMADLVQ
Sbjct: 239 EPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQ 297
>M5X2A7_PRUPE (tr|M5X2A7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004393mg PE=4 SV=1
Length = 512
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/302 (60%), Positives = 221/302 (73%), Gaps = 8/302 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDF-GSTHYQIVPAKSVTVAKKSSDYTQ 59
MATAAVI DI EKL +D G H K+V A+K S+ +
Sbjct: 2 MATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCSS 61
Query: 60 AFPASDRPNQSIKALKEHVDGVPA---AAETWFQECDSNDLEVESSDLGYSVEALLLLQK 116
FP+S+RP QSI+ALKEHV A A + WFQE NDLE ESSDL YSVEALLLLQK
Sbjct: 62 RFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQEL--NDLEEESSDLEYSVEALLLLQK 119
Query: 117 SMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRI-NTKRKIPGKTGSAMQA 175
SMLEKQW+LS E++VL + + + KK+ VTCSGVSARQRR+ +TKRK K+ M
Sbjct: 120 SMLEKQWNLSFEKKVLRD-STSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHP 178
Query: 176 CDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEK 235
+R+++SPELLQN KGYVKGV+SE LL+H EVV+LS+KIKVGLS++EHKSRLKE+
Sbjct: 179 STNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKER 238
Query: 236 LGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADL 295
LGCEPSD+Q+A SL+ISR++L++K IEC LARE+LAMSNVRLVMSIAQRYDNMGAEMADL
Sbjct: 239 LGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 298
Query: 296 VQ 297
+Q
Sbjct: 299 IQ 300
>Q9SLX4_TOBAC (tr|Q9SLX4) Sigma factor OS=Nicotiana tabacum GN=sigA1 PE=2 SV=1
Length = 508
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 219/299 (73%), Gaps = 6/299 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
M+TAAVI D+ EKL+C+SD + + K+V AKKSSDY+ +
Sbjct: 2 MSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPS 61
Query: 61 FPASDRPNQSIKALKEHVD--GVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSM 118
S R +QS K+LKEHVD P+ +WF+ + L+ ES D SVE LLLLQKSM
Sbjct: 62 C-VSSRKSQSAKSLKEHVDITADPSDVPSWFEMYE--QLQNESDDEDESVEVLLLLQKSM 118
Query: 119 LEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDA 178
LEKQW+LS E + LT P+ EK SKK+ +TCSG SAR+RR+++++++ + SA A
Sbjct: 119 LEKQWNLSLE-QTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAA 177
Query: 179 MQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGC 238
+RS+I PELLQNR KGYVKGVVSE+LL+HAEV++LS+KI+VGL L+E KSRLKE+LGC
Sbjct: 178 KPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGC 237
Query: 239 EPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
EPSDDQ+A SLK+SR++L++ IEC+LARERLAMSNVRLVMSIAQRYDN+GAEMADLVQ
Sbjct: 238 EPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQ 296
>B9I6T5_POPTR (tr|B9I6T5) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_730207 PE=4 SV=1
Length = 499
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/299 (56%), Positives = 211/299 (70%), Gaps = 15/299 (5%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATA+ I D+ EKLS +D G HYQI KSV VAKKSS Y +
Sbjct: 2 MATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGPS 61
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAE--TWFQECDSNDLEVESSDLGYSVEALLLLQKSM 118
FP+S R S KALKE +D A++ TWF+ D D E ESS L YSVEAL+LLQKSM
Sbjct: 62 FPSSYRNPHSNKALKELIDTASASSTVATWFKTLD--DFEEESSVLDYSVEALILLQKSM 119
Query: 119 LEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDA 178
LEKQW+LS E + + + +KS+KK+ VTCSGVSARQRR+N KRK ++
Sbjct: 120 LEKQWNLSFE-SINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKNQNQS--------- 169
Query: 179 MQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGC 238
+ S ISP LL NR KGYVKGVVS+++L H EVV+LS I+ GLSL++HKS LKE+LGC
Sbjct: 170 -KFMSDISPGLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGC 228
Query: 239 EPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
EPSD+Q+A SL+ISR++L+++ I+C+LARE+LAMSNVRLVMSIAQ+ DNMGAEMADLVQ
Sbjct: 229 EPSDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQ 287
>K4BJE9_SOLLC (tr|K4BJE9) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc03g097320.2 PE=4 SV=1
Length = 509
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 217/301 (72%), Gaps = 9/301 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MAT AVI D+ EKLSCSSD +Q+ K+V AKKSSDY+ +
Sbjct: 2 MATTAVIGLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPS 61
Query: 61 FPASDRPNQSIKALKEHVD--GVPAAAETWFQECDS--NDLEVESSDLGYSVEALLLLQK 116
S R QS+KALKEHVD P+ ++WF+ + N+ + E D SVE LLLLQK
Sbjct: 62 C-VSSRKLQSVKALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDD---SVEVLLLLQK 117
Query: 117 SMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQAC 176
SMLEKQW+LS E E LT +++K+ KK+ + CSG SAR+RR+++++++ + SA
Sbjct: 118 SMLEKQWNLSAE-ETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPIS 176
Query: 177 DAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKL 236
+RS++ P+LLQNR KGYVKG+VSE+LL+H EV++LS+KIKVGL ++E KSRLKE+L
Sbjct: 177 ATKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERL 236
Query: 237 GCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLV 296
GCEPSDDQ+A SLK+SR++L++ IEC+LARERL+MSNVRLVMSIAQRYDNMGAEMADLV
Sbjct: 237 GCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLV 296
Query: 297 Q 297
Q
Sbjct: 297 Q 297
>D7KZ14_ARALL (tr|D7KZ14) RNA polymerase sigma subunit 1 OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_893809 PE=4 SV=1
Length = 503
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/304 (52%), Positives = 199/304 (65%), Gaps = 20/304 (6%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKK--SSDYT 58
MATAAVI D+ EK +D S+ Y I KS AKK SS+Y+
Sbjct: 1 MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASSSNYS 60
Query: 59 QAFPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSD---LGYSVEALLLLQ 115
+FP+S+R QS KALKE VD V + + W +LE E D +G+SVEALLLLQ
Sbjct: 61 PSFPSSNRHTQSAKALKESVD-VASTEKPWIHNGTDKELEEEGYDDDLIGHSVEALLLLQ 119
Query: 116 KSMLEKQWSLSCEREVLTEHP--RQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAM 173
KSMLEK W+LS E+ +E R + K +TCSG+SARQRRI K+K + M
Sbjct: 120 KSMLEKSWNLSFEKAASSESSSKRTIRKKKIPVITCSGISARQRRIGAKKK------TNM 173
Query: 174 QACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLK 233
A +S + +GYVKGV+SE +LSHAEVV+LS+KIK GL LD+HKSRLK
Sbjct: 174 THVKA------VSDVSSGKQVRGYVKGVISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLK 227
Query: 234 EKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMA 293
++LGCEPSD+Q+A SLKISR+EL+A +EC LARE+LAMSNVRLVMSIAQRYDN+GAEM+
Sbjct: 228 DRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMS 287
Query: 294 DLVQ 297
DLVQ
Sbjct: 288 DLVQ 291
>R0GH75_9BRAS (tr|R0GH75) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10020145mg PE=4 SV=1
Length = 521
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 199/309 (64%), Gaps = 12/309 (3%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI D+ EK +D S+ Y I KS AKK+S +
Sbjct: 1 MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASSSSNY 60
Query: 61 FPAS---DRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSD----LGYSVEALLL 113
P+ +R QS KA+ E VD V + + W + E D +G+SVEALLL
Sbjct: 61 SPSFPSSNRHTQSAKAVTESVDVVASTEQPWVPNVTDKEFEEGGYDDDVLIGHSVEALLL 120
Query: 114 LQKSMLEKQWSLSCEREVLTEHP--RQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGS 171
LQKSMLEK W+LS E+ +E R + K +TCSG+SARQRRI K+K +
Sbjct: 121 LQKSMLEKSWNLSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAK 180
Query: 172 AM-QACDAMQMRSLISPELLQ-NRSKG-YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEH 228
A+ Q+RS++S EL Q NR +G YVKGV+SE +LSH EVV+LS+KIK GL LD+H
Sbjct: 181 AVSDVSSGKQVRSVMSSELFQHNRVRGGYVKGVISEDVLSHTEVVRLSKKIKSGLRLDDH 240
Query: 229 KSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNM 288
KSRLK++LGCEPSD+Q+A SLKISR+EL+A +EC LARE+LAMSNVRLVMSIAQRYDN+
Sbjct: 241 KSRLKDRLGCEPSDEQLAISLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNL 300
Query: 289 GAEMADLVQ 297
GAEM+DLVQ
Sbjct: 301 GAEMSDLVQ 309
>R0IAB6_9BRAS (tr|R0IAB6) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10020145mg PE=4 SV=1
Length = 464
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 199/309 (64%), Gaps = 12/309 (3%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI D+ EK +D S+ Y I KS AKK+S +
Sbjct: 2 MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASSSSNY 61
Query: 61 FPAS---DRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSD----LGYSVEALLL 113
P+ +R QS KA+ E VD V + + W + E D +G+SVEALLL
Sbjct: 62 SPSFPSSNRHTQSAKAVTESVDVVASTEQPWVPNVTDKEFEEGGYDDDVLIGHSVEALLL 121
Query: 114 LQKSMLEKQWSLSCEREVLTEHP--RQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGS 171
LQKSMLEK W+LS E+ +E R + K +TCSG+SARQRRI K+K +
Sbjct: 122 LQKSMLEKSWNLSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAK 181
Query: 172 AM-QACDAMQMRSLISPELLQ-NRSKG-YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEH 228
A+ Q+RS++S EL Q NR +G YVKGV+SE +LSH EVV+LS+KIK GL LD+H
Sbjct: 182 AVSDVSSGKQVRSVMSSELFQHNRVRGGYVKGVISEDVLSHTEVVRLSKKIKSGLRLDDH 241
Query: 229 KSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNM 288
KSRLK++LGCEPSD+Q+A SLKISR+EL+A +EC LARE+LAMSNVRLVMSIAQRYDN+
Sbjct: 242 KSRLKDRLGCEPSDEQLAISLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNL 301
Query: 289 GAEMADLVQ 297
GAEM+DLVQ
Sbjct: 302 GAEMSDLVQ 310
>M1CIG2_SOLTU (tr|M1CIG2) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400026491 PE=4 SV=1
Length = 610
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/236 (58%), Positives = 181/236 (76%), Gaps = 4/236 (1%)
Query: 64 SDRPNQSIKALKEHVDGV--PAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLEK 121
S R QS+KALKEH+D P+ ++WF+ + + SVEA LLLQKSMLEK
Sbjct: 183 SSRKLQSVKALKEHIDIASDPSDVQSWFERFEQLQ-NESDDEDDDSVEAFLLLQKSMLEK 241
Query: 122 QWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQM 181
QW+LS E E LT P+ EK+ KK+ +TCSG +AR+RR ++++++ G SA +
Sbjct: 242 QWNLSAE-ETLTASPQHEKNCKKMHITCSGTTARRRRTDSRQRVLGPKSSATPISATKPL 300
Query: 182 RSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPS 241
RS+I PELLQNR KGYVKGVVS++LL+H EV++LS+KI+VGL ++E KSRLK++LGCEPS
Sbjct: 301 RSIIGPELLQNRLKGYVKGVVSDELLTHTEVLQLSKKIQVGLHVEEQKSRLKDRLGCEPS 360
Query: 242 DDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
DDQ+A SLK+ R++L++ IEC+LARERL+MSNVRLVMSIAQRYDNMGAEMADLVQ
Sbjct: 361 DDQLALSLKMPRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 416
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 58/67 (86%)
Query: 231 RLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGA 290
RLKE+LGCE S Q++ SLK+SR++LR+ IEC+LARER +MS++RLVMSIAQRYDNMG
Sbjct: 5 RLKERLGCETSYYQLSLSLKLSRTDLRSTLIECSLARERFSMSSIRLVMSIAQRYDNMGP 64
Query: 291 EMADLVQ 297
EM DLV+
Sbjct: 65 EMTDLVR 71
>F6HE86_VITVI (tr|F6HE86) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_16s0039g00660 PE=4 SV=1
Length = 578
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 201/310 (64%), Gaps = 29/310 (9%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCS-SDFGSTHYQIVPAKSVTVAKKSSDYTQ 59
M TAAVI D+ EKLS +D G H+ P K++ AKK S+YT
Sbjct: 73 MGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYT- 131
Query: 60 AFPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSML 119
P+S+R QS+KALKEHV+ A + + D + E D Y VEA LLLQKSML
Sbjct: 132 --PSSNRSIQSMKALKEHVESASAPSTA---DPDLSSSSSEVEDEEYLVEAFLLLQKSML 186
Query: 120 EKQWSLSCEREVLTEHPR------------QEKSSKKVAVTCSGVSARQRRINTKRKIPG 167
EKQW+LS V+ + ++ K+ VTCSG SARQRRI+ ++++
Sbjct: 187 EKQWNLSFVGTVVGKEEEEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRV-- 244
Query: 168 KTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDE 227
M ++R+ + ++NR KGYVKGVVSE+LL+HA+VV LS KIK GL L++
Sbjct: 245 -----MNEKSKSRVRAALG---VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLED 296
Query: 228 HKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDN 287
HKSRLKE++G EP+D+Q+AASL++SR+EL++K IEC+LARE+LAMSNVRLVMSIAQRYDN
Sbjct: 297 HKSRLKERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDN 356
Query: 288 MGAEMADLVQ 297
MGAEMADLVQ
Sbjct: 357 MGAEMADLVQ 366
>M1CKN6_SOLTU (tr|M1CKN6) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400027038 PE=4 SV=1
Length = 505
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 203/298 (68%), Gaps = 6/298 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIV-PAKSVTVAKKSSDYTQ 59
MA AAVI D+ EKL+CS D H I P +V AKKSS+Y+
Sbjct: 1 MAIAAVIGLYAGNRILSSSFYYSDLTEKLACSGD----HALICNPTWNVINAKKSSNYST 56
Query: 60 AFPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSML 119
+ S+R QS+KA+KEHV+ ++ L+ ES SVE LLLLQKSML
Sbjct: 57 GY-VSNRKKQSVKAVKEHVNIASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSML 115
Query: 120 EKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAM 179
EKQW+LS E+ + P ++ KK+ +TCSG SAR+RR++T++++ SA +
Sbjct: 116 EKQWNLSAEKTLAAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASK 175
Query: 180 QMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCE 239
++RS++ PEL QNR +GY+KGVV+++LL+H EVV+LS+KIK GL L+E K+ LKE+LGCE
Sbjct: 176 RLRSVVGPELQQNRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCE 235
Query: 240 PSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
PSDDQ+A SLK+S ++LR+ +EC+LARE+LAMSNVRLVMSIAQRYD+MG EMADL+Q
Sbjct: 236 PSDDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQ 293
>Q9SLX3_TOBAC (tr|Q9SLX3) Sigma factor OS=Nicotiana tabacum GN=sigA2 PE=2 SV=1
Length = 502
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 189/270 (70%), Gaps = 10/270 (3%)
Query: 31 CSSDFGSTHYQIVPAKSVTVAKKSSDYTQAFPASDRPNQSIKALKEHVD---GVPAAAET 87
C SD + K+V AK SS+Y+ ++ S+R QS+KALKEHVD + E
Sbjct: 28 CVSDHALPCHHFPSPKNVINAKNSSNYSPSY-VSNRKKQSVKALKEHVDIASNRDSDTEP 86
Query: 88 WFQECDSNDLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAV 147
W Q L+ S SVE LLLLQKSMLEKQW+LS E+ + E+ KK+ +
Sbjct: 87 WVQMFK--QLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSAEKAMTNEN----NCKKKMQI 140
Query: 148 TCSGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLL 207
TCSG SAR+RR++T+++ SA + ++RS+I PELLQNRSKGY+ GVV ++LL
Sbjct: 141 TCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRSVIGPELLQNRSKGYINGVVGQELL 200
Query: 208 SHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLAR 267
+H EVV+LS+KIK GL L+E KSRLKE+LGCEPSDDQ+A SLKISR++LR+ IEC+LAR
Sbjct: 201 THTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLAISLKISRADLRSTLIECSLAR 260
Query: 268 ERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
E+LAMSNVRLVMSIAQRYD G EMADL+Q
Sbjct: 261 EKLAMSNVRLVMSIAQRYDTNGTEMADLIQ 290
>K4C8Z1_SOLLC (tr|K4C8Z1) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc06g072710.2 PE=4 SV=1
Length = 505
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 202/298 (67%), Gaps = 6/298 (2%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIV-PAKSVTVAKKSSDYTQ 59
MA AAVI D+ EKL+CS D H I P ++V AKKSS+Y+
Sbjct: 1 MAIAAVIGPYAGNRILSSSFYYSDLTEKLACSGD----HALICNPTRNVINAKKSSNYSA 56
Query: 60 AFPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSML 119
+ S+R QS+KA+KEHV+ ++ L+ ES VE LLLLQKSML
Sbjct: 57 GY-VSNRKKQSVKAVKEHVNIASNHSDVEPMVEMLKKLQNESCSKEDPVEVLLLLQKSML 115
Query: 120 EKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAM 179
EKQW+LS E+ + P ++ KK+ +TCSG SAR+RR++T++++ SA +
Sbjct: 116 EKQWNLSAEKTLEAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKASAEANSASK 175
Query: 180 QMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCE 239
++RS++ PEL QNR +GY+ GVV+++LL+H EVV+LS+KIK GL L+E K+ LKE+LGCE
Sbjct: 176 RLRSVVGPELQQNRLRGYMNGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCE 235
Query: 240 PSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
PSDDQ+A SLK+S ++LR+ +EC+LARE+LAMSNVRLVMSIAQRYD+MG EMADL+Q
Sbjct: 236 PSDDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQ 293
>O49935_SINAL (tr|O49935) Sig1 protein OS=Sinapis alba GN=Sig1 PE=2 SV=1
Length = 481
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 187/302 (61%), Gaps = 38/302 (12%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MAT AVI D+ EK +D S+ Y +S AKK+S + +
Sbjct: 1 MATTAVIGLNAGKRLLSSSFYYSDVTEKFLSVNDLCSSQYH---TRSGITAKKTSSSSSS 57
Query: 61 FPASD-----RPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQ 115
+ R QS KALKE V ++ + W +D E+E D+ +SVEALLLLQ
Sbjct: 58 NYSPSFPSSSRQTQSAKALKE---SVASSVQPWLPP--GSDQELEEDDIDHSVEALLLLQ 112
Query: 116 KSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQA 175
+SMLEKQW+LS E K+ KKV VTCSG+SARQRRI K+K K S +
Sbjct: 113 RSMLEKQWNLSFE-----------KTRKKVPVTCSGISARQRRIGAKKKTNVKAVSEVN- 160
Query: 176 CDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEK 235
N KGYVKGV+S+ +LSHAEVV+LS+KIK GL LDEHKSRL ++
Sbjct: 161 -------------FQNNLVKGYVKGVISDHVLSHAEVVRLSKKIKSGLRLDEHKSRLTDR 207
Query: 236 LGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADL 295
LGCEPSD+Q+A SLKISR+EL+A +EC LARE+LAMSNVRLVMSIAQRYDNMGAEM+DL
Sbjct: 208 LGCEPSDEQLAMSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 267
Query: 296 VQ 297
VQ
Sbjct: 268 VQ 269
>M1CIG4_SOLTU (tr|M1CIG4) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400026491 PE=4 SV=1
Length = 391
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 149/180 (82%), Gaps = 1/180 (0%)
Query: 118 MLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACD 177
MLEKQW+LS E E LT P+ EK+ KK+ +TCSG +AR+RR ++++++ G SA
Sbjct: 1 MLEKQWNLSAE-ETLTASPQHEKNCKKMHITCSGTTARRRRTDSRQRVLGPKSSATPISA 59
Query: 178 AMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLG 237
+RS+I PELLQNR KGYVKGVVS++LL+H EV++LS+KI+VGL ++E KSRLK++LG
Sbjct: 60 TKPLRSIIGPELLQNRLKGYVKGVVSDELLTHTEVLQLSKKIQVGLHVEEQKSRLKDRLG 119
Query: 238 CEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
CEPSDDQ+A SLK+ R++L++ IEC+LARERL+MSNVRLVMSIAQRYDNMGAEMADLVQ
Sbjct: 120 CEPSDDQLALSLKMPRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 179
>M4CWB6_BRARP (tr|M4CWB6) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra008513 PE=4 SV=1
Length = 492
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/311 (49%), Positives = 192/311 (61%), Gaps = 46/311 (14%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGST--HYQIVPAKSVTVAKKSSDYT 58
MAT AV+ D+ EK +D S+ +Y I +S AKK+S +
Sbjct: 2 MATTAVVGLNAGKRLLSSSFYYSDVTEKFLSVNDLCSSQYYYHIASTRSGITAKKTSSSS 61
Query: 59 QA------FPASDRPNQSIKALKEHVDGV----PAAAETWFQECDSNDLEVESSDLGYSV 108
+ F +S R QS KALKE VD V P ++ QE + E E D +V
Sbjct: 62 SSSNYSPSFHSSSRHTQSAKALKESVDVVQQWLPPGSD---QELEEESHEYEDDD---TV 115
Query: 109 EALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGK 168
EALLLLQ+S+LEKQW+LS E K KK+ VTCSG SARQRR+ K+K K
Sbjct: 116 EALLLLQRSLLEKQWNLSFE-----------KKKKKILVTCSGTSARQRRMGAKKKTNIK 164
Query: 169 TGSAMQACDAMQMRSLISPELLQNR--SKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLD 226
+++ +L QN GYVKGV+S+ +LSHAEVV+LS+KIK GL LD
Sbjct: 165 ---------------VVNSDLFQNNRVKGGYVKGVISDDVLSHAEVVRLSKKIKSGLRLD 209
Query: 227 EHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYD 286
EHKSRLK++LGCEPSD+Q+A SLKISR+EL+A +EC LARE+LAMSNVRLVMSIAQRYD
Sbjct: 210 EHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECNLAREKLAMSNVRLVMSIAQRYD 269
Query: 287 NMGAEMADLVQ 297
NMGAEM+DLVQ
Sbjct: 270 NMGAEMSDLVQ 280
>G3FLY2_TOBAC (tr|G3FLY2) Sigma factor (Fragment) OS=Nicotiana tabacum
GN=SigA-mthrhm PE=4 SV=1
Length = 264
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 168/251 (66%), Gaps = 11/251 (4%)
Query: 24 DIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQAFPASDRPNQSIKALKEHVD---G 80
D+ EK C SD + K+V AK SS+Y+ ++ S+R QS+KALKEHVD
Sbjct: 22 DLTEKF-CVSDHALPCHHFPSPKNVINAKNSSNYSPSY-VSNRKKQSVKALKEHVDIASN 79
Query: 81 VPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEK 140
+ E W Q L+ S SVE LLLLQKSMLEKQW+LS E+ + E+
Sbjct: 80 RDSDTEPWVQMFK--QLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSAEKAMTNEN----N 133
Query: 141 SSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKG 200
KK+ TCSG SAR+RR++T+++ SA ++RS+I PELLQNRSKGY+ G
Sbjct: 134 CKKKMQTTCSGTSARRRRMDTRKRDLLPKNSATSDSSNKRLRSVIGPELLQNRSKGYING 193
Query: 201 VVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKT 260
VV ++LL+H EVV+LS+KIK GL L+E KSRLKE+LGCEPSDDQ+A SLKISR++LR+
Sbjct: 194 VVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLAISLKISRADLRSIL 253
Query: 261 IECTLARERLA 271
IEC+LARE+LA
Sbjct: 254 IECSLAREKLA 264
>M0RQD1_MUSAM (tr|M0RQD1) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 459
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 133/183 (72%), Gaps = 2/183 (1%)
Query: 115 QKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQ 174
KSMLEKQW L + P ++A SG+SAR+RR+ ++RK G +
Sbjct: 67 HKSMLEKQWELPFTQMTTVAAPGNGCRVPEIAR--SGISARERRMISRRKCIGHRDAMAP 124
Query: 175 ACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKE 234
A Q+RS +SPELL + + GYV+G VSE LL+HAEVV LS+KI+ G+ ++EH+SRLKE
Sbjct: 125 ASRVRQLRSCVSPELLNSDASGYVRGTVSESLLTHAEVVNLSKKIRAGMRVEEHRSRLKE 184
Query: 235 KLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMAD 294
K+G EP+D Q+A+SL++SR+EL K IEC+LARE+LAMSNVRLVMSIAQ+YDNMG MAD
Sbjct: 185 KMGYEPTDKQLASSLRMSRAELHTKMIECSLAREKLAMSNVRLVMSIAQKYDNMGTAMAD 244
Query: 295 LVQ 297
L+Q
Sbjct: 245 LIQ 247
>K7K9J2_SOYBN (tr|K7K9J2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 147
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 107/147 (72%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATA VI DIIEKLS SDFGSTHYQIVP KS+ VAKKSS+YT
Sbjct: 1 MATAVVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPKKSLIVAKKSSNYTPT 60
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLE 120
FPAS++ NQ IKALKEHVD P + WFQ +SNDLEVESS++GYS+EALLLLQKSMLE
Sbjct: 61 FPASNQQNQFIKALKEHVDDAPTIVDPWFQSYNSNDLEVESSEMGYSLEALLLLQKSMLE 120
Query: 121 KQWSLSCEREVLTEHPRQEKSSKKVAV 147
KQW+LS E+E+LTE+ + K +KV +
Sbjct: 121 KQWNLSFEKEMLTENLSKGKKCRKVTL 147
>M0RYS9_MUSAM (tr|M0RYS9) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 423
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 126/184 (68%), Gaps = 2/184 (1%)
Query: 114 LQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAM 173
L SMLEKQW L + P E S + +T SG+SAR+RR + RK + +
Sbjct: 30 LFSSMLEKQWELPFTQMTTVVAP--ENSCQMPEITRSGISARERRTISSRKCFSHKANLV 87
Query: 174 QACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLK 233
+ Q+ +S ELL++ GYV+G VSE LL+HAEV LS+ IK G+ + E +++L+
Sbjct: 88 PSSRVKQLHPSVSRELLKSDISGYVRGTVSENLLTHAEVANLSKTIKAGIHIQEQRAKLQ 147
Query: 234 EKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMA 293
+KLG EP+D Q+A+SL++SR+EL K IE +LARE+LAMSNVRLVMSIAQ+YDN+GAEM
Sbjct: 148 DKLGFEPTDRQLASSLRMSRAELHTKMIESSLAREKLAMSNVRLVMSIAQKYDNLGAEMT 207
Query: 294 DLVQ 297
DL+Q
Sbjct: 208 DLIQ 211
>Q0J7T6_ORYSJ (tr|Q0J7T6) Os08g0163400 protein OS=Oryza sativa subsp. japonica
GN=Os08g0163400 PE=2 SV=2
Length = 520
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 137/203 (67%), Gaps = 14/203 (6%)
Query: 100 ESSDLGYSVEALLLLQKSMLEKQWSLSCERE-----VLTEHPRQEKSSKKVAVTCSGVSA 154
+ DL S+EA++LLQ+SMLEKQW L + + + + S V V S VSA
Sbjct: 115 HAHDLESSLEAIVLLQRSMLEKQWELPFDDDNHAMAIGLAEDDDDTSKATVVVARSSVSA 174
Query: 155 RQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVK 214
RQRR++ +R+ K G+A A +SPEL+Q+R++ Y++G VS++LL+H +VV
Sbjct: 175 RQRRMSGRRRGRTKNGAAHFA---------VSPELIQSRNRIYLRGTVSKELLTHKQVVH 225
Query: 215 LSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSN 274
LS KIK G+ L + +S+LKEKLG EPS Q+A SLKIS ELR++ E LARE L MSN
Sbjct: 226 LSHKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFLAREMLTMSN 285
Query: 275 VRLVMSIAQRYDNMGAEMADLVQ 297
+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 286 LRLVISIAQKYDNLGVELADLIQ 308
>O48655_ORYSJ (tr|O48655) Plastid RNA polymerase sigma factor OS=Oryza sativa
subsp. japonica GN=rsigA PE=2 SV=1
Length = 519
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 137/203 (67%), Gaps = 14/203 (6%)
Query: 100 ESSDLGYSVEALLLLQKSMLEKQWSLSCERE-----VLTEHPRQEKSSKKVAVTCSGVSA 154
+ DL S+EA++LLQ+SMLEKQW L + + + + S V V S VSA
Sbjct: 114 HAHDLESSLEAIVLLQRSMLEKQWELPFDDDNHAMAIGLAEDDDDTSKATVVVARSSVSA 173
Query: 155 RQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVK 214
RQRR++ +R+ K G+A A +SPEL+Q+R++ Y++G VS++LL+H +VV
Sbjct: 174 RQRRMSGRRRGRTKNGAAHFA---------VSPELIQSRNRIYLRGTVSKELLTHKQVVH 224
Query: 215 LSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSN 274
LS KIK G+ L + +S+LKEKLG EPS Q+A SLKIS ELR++ E LARE L MSN
Sbjct: 225 LSHKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFLAREMLTMSN 284
Query: 275 VRLVMSIAQRYDNMGAEMADLVQ 297
+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 285 LRLVISIAQKYDNLGVELADLIQ 307
>J3MQN6_ORYBR (tr|J3MQN6) Uncharacterized protein OS=Oryza brachyantha
GN=OB08G14150 PE=4 SV=1
Length = 554
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 30/216 (13%)
Query: 100 ESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKK--------------- 144
+++DL S+E++LLLQ+SMLEKQW L E E +H + K
Sbjct: 139 DAADLESSLESILLLQRSMLEKQWELPFEDE---DHASDDGGGDKHAMAIGLAEDEIKED 195
Query: 145 ---VAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGV 201
V V S +SARQRR++ +R+ K G+A A +SPEL+Q+R++ Y++G
Sbjct: 196 KVTVVVARSTLSARQRRMSGRRRGRPKNGAAHFA---------VSPELMQSRNRIYLRGT 246
Query: 202 VSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTI 261
VS++LL+H +VV LS KIK G+ L + +S+LKEKLG EPS Q+A SLKIS ELR++
Sbjct: 247 VSKELLTHKQVVHLSNKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMR 306
Query: 262 ECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
E LARE L MSN+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 307 ESFLAREMLTMSNIRLVISIAQKYDNLGVELADLIQ 342
>B4FP19_MAIZE (tr|B4FP19) RNA polymerase sigma factor 1 isoform 1 OS=Zea mays
GN=ZEAMMB73_912653 PE=2 SV=1
Length = 496
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 135/207 (65%), Gaps = 16/207 (7%)
Query: 91 ECDSNDLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCS 150
E DS E ESS +EA++LLQ+SMLEKQW L E ++ + E V V S
Sbjct: 94 ELDSK-FEFESS-----LEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARS 147
Query: 151 GVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHA 210
GVSARQRR++ + + G+ + +SPEL+Q+R++ Y++G VS+ LL+H
Sbjct: 148 GVSARQRRMSGR-----RRGAVVGRKSVT-----VSPELMQSRNRIYLRGTVSKDLLTHK 197
Query: 211 EVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERL 270
+VV+LS KIK G+ L +S+LKEKLG EPS Q+A SL+I ELRA+ E LARE L
Sbjct: 198 QVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPAPELRARMRESFLAREML 257
Query: 271 AMSNVRLVMSIAQRYDNMGAEMADLVQ 297
AMSN RLV+SIAQ+YDN+G E+ DL+Q
Sbjct: 258 AMSNTRLVISIAQKYDNLGVELPDLIQ 284
>Q9ZTI3_MAIZE (tr|Q9ZTI3) RNA polymerase sigma factor 1 (Fragment) OS=Zea mays
GN=sig1 PE=2 SV=1
Length = 398
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 130/202 (64%), Gaps = 18/202 (8%)
Query: 96 DLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSAR 155
+LE ESS +EA++LLQ+SMLEKQW L E ++ TE E V V SGVSAR
Sbjct: 3 ELEFESS-----LEAIVLLQRSMLEKQWELPFEDDISTE---DEDERSTVVVARSGVSAR 54
Query: 156 QRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKL 215
QR + + + +SPEL+Q+R++ Y++G VS+ LL+H +VV+L
Sbjct: 55 QR----------RMSGRRRGAFVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQL 104
Query: 216 SEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNV 275
S KIK G+ L +S+LKEKLG EPS Q+A SL+I ELRA+ E LARE LAMSN
Sbjct: 105 SRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPAPELRARMRESFLAREMLAMSNT 164
Query: 276 RLVMSIAQRYDNMGAEMADLVQ 297
RLV+SIAQ+YDN+G E+ DL+Q
Sbjct: 165 RLVISIAQKYDNLGVELPDLIQ 186
>K7UB44_MAIZE (tr|K7UB44) RNA polymerase sigma factor 2 OS=Zea mays
GN=ZEAMMB73_517552 PE=4 SV=1
Length = 504
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 135/198 (68%), Gaps = 14/198 (7%)
Query: 102 SDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTC--SGVSARQRRI 159
S+ S+EA++LLQ+SMLEKQW L E ++++ Q+ K V SGVSARQRR+
Sbjct: 107 SEFESSLEAIVLLQRSMLEKQWELPFEDDIISTDDEQDDRVSKATVVAARSGVSARQRRM 166
Query: 160 NTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKI 219
+ +R+ G+ A ISPEL+Q+R++ Y++G VS+ LL+H +V++LS KI
Sbjct: 167 SGRRRGAGRKSVA------------ISPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKI 214
Query: 220 KVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVM 279
K G+ L +S+LKEKLG EPS Q+A SL+IS ELRA+ E LARE L MSN+RLV+
Sbjct: 215 KDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRISAPELRARMRESFLAREMLTMSNIRLVI 274
Query: 280 SIAQRYDNMGAEMADLVQ 297
SIA +YDN+G ++ADL+Q
Sbjct: 275 SIAHKYDNLGVDLADLIQ 292
>K3YH90_SETIT (tr|K3YH90) Uncharacterized protein OS=Setaria italica
GN=Si013608m.g PE=4 SV=1
Length = 499
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 163/264 (61%), Gaps = 29/264 (10%)
Query: 44 PAKSVTVAKKSSDYTQAFPASDRPNQSIKALKEH---------VDGVPAAAETWFQECDS 94
P +V VA ++S + ++PA +++AL+ H P + DS
Sbjct: 43 PKLAVVVAHRASA-SSSYPAGHARAHAVRALRNHSAPALAPPPPPPPPEDPAALAPDLDS 101
Query: 95 NDLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKK-VAVTCSGVS 153
E ESS +EA++LLQ+SMLEKQW L E E EH + +K V V SGVS
Sbjct: 102 -AFEFESS-----LEAIVLLQRSMLEKQWELPFEDEDEEEHHSESLFAKSTVVVARSGVS 155
Query: 154 ARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVV 213
ARQRR++ +R+ G+ A ISPEL+Q+R++ Y++G VS++LL+H +VV
Sbjct: 156 ARQRRMSGRRRGTGRKSVA------------ISPELMQSRNRIYLRGTVSKELLTHKQVV 203
Query: 214 KLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMS 273
+LS+KIK G+ L +S+LKEKLG EPS Q+A SL+IS ELRA+ E LARE L MS
Sbjct: 204 QLSKKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRISAPELRARMRESFLAREMLTMS 263
Query: 274 NVRLVMSIAQRYDNMGAEMADLVQ 297
N+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 264 NIRLVISIAQKYDNLGVELADLIQ 287
>I1QFY1_ORYGL (tr|I1QFY1) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 528
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 137/211 (64%), Gaps = 22/211 (10%)
Query: 100 ESSDLGYSVEALLLLQKSMLEKQWSLSCERE-------------VLTEHPRQEKSSKKVA 146
+ DL S+EA++LLQ+SMLEKQW L + E + + S V
Sbjct: 115 HAHDLESSLEAIVLLQRSMLEKQWELPFDDEDHVSDDDDNHAMAIGLAEDDDDTSKATVV 174
Query: 147 VTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQL 206
V S VSARQRR++ +R+ K G+A A +SPEL+Q+R++ Y++G VS++L
Sbjct: 175 VARSSVSARQRRMSGRRRGRTKNGAAHFA---------VSPELIQSRNRIYLRGTVSKEL 225
Query: 207 LSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLA 266
L+H +VV LS KIK G+ L + +S+LKEKLG EPS Q+A SLKIS ELR++ E LA
Sbjct: 226 LTHKQVVHLSHKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFLA 285
Query: 267 RERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
RE L MSN+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 286 REMLTMSNLRLVISIAQKYDNLGVELADLIQ 316
>M7Y829_TRIUA (tr|M7Y829) RNA polymerase sigma factor rpoD OS=Triticum urartu
GN=TRIUR3_34525 PE=4 SV=1
Length = 508
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 137/204 (67%), Gaps = 19/204 (9%)
Query: 106 YSVEALLLLQKSMLEKQWSLSCEREVL------------TEHPRQEKSSKKVAVTCSGVS 153
+S++A++LLQ+SMLEKQW L E E E + S V V SGVS
Sbjct: 100 FSLDAIILLQRSMLEKQWQLPFEEEEDDGGGDGHHAIGSAEDEDGKGRSSSVVVARSGVS 159
Query: 154 ARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVV 213
ARQRR++ +R+ K GS A+ + ISPELLQ+R++ Y++G VS++LL+H +VV
Sbjct: 160 ARQRRMSGRRRGRSKKGSG-----AVHLS--ISPELLQSRNRIYLRGTVSKELLTHKQVV 212
Query: 214 KLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMS 273
LS+KIK G+ L + +S+LKEKLG EPS Q+A SL+IS ELR++ E LARE L MS
Sbjct: 213 HLSKKIKDGIWLQQQRSKLKEKLGNEPSYKQMAQSLRISTPELRSRMRESFLAREVLTMS 272
Query: 274 NVRLVMSIAQRYDNMGAEMADLVQ 297
N+RLV+SIAQ+YD +G E++DL+Q
Sbjct: 273 NIRLVISIAQKYDKLGVELSDLIQ 296
>C5YHG2_SORBI (tr|C5YHG2) Putative uncharacterized protein Sb07g004340 OS=Sorghum
bicolor GN=Sb07g004340 PE=4 SV=1
Length = 500
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 23/209 (11%)
Query: 91 ECDSN-DLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTC 149
E DS + E+ESS +EA++LLQ+SMLEKQW L E E + R K++ V V
Sbjct: 101 ELDSEFEFELESS-----LEAIVLLQRSMLEKQWQLPFEDEDEDDE-RLTKAA--VVVAR 152
Query: 150 SGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSL-ISPELLQNRSKGYVKGVVSEQLLS 208
SGVSA + +S+ +SPEL+Q+R++ Y++G VS+ LL+
Sbjct: 153 SGVSA-------------RQRRMSGRRRGPGRKSVTVSPELMQSRNRIYLRGTVSKDLLT 199
Query: 209 HAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARE 268
H +V++LS KIK G+ L +S+LKEKLG EPS Q+A SL IS ELRA+ E LARE
Sbjct: 200 HKQVIQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLHISPPELRARMRESFLARE 259
Query: 269 RLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L MSN+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 260 MLTMSNIRLVISIAQKYDNLGVELADLIQ 288
>O24348_SORBI (tr|O24348) Plastid RNA polymerase sigma factor OS=Sorghum bicolor
GN=sig1 PE=2 SV=1
Length = 500
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 23/209 (11%)
Query: 91 ECDSN-DLEVESSDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKKVAVTC 149
E DS + E+ESS +EA++LLQ+SMLEKQW L E E + R K++ V V
Sbjct: 101 ELDSEFEFELESS-----LEAIVLLQRSMLEKQWQLPFEDEDEDDE-RLTKAA--VVVAR 152
Query: 150 SGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSL-ISPELLQNRSKGYVKGVVSEQLLS 208
SGVSA + +S+ +SPEL+Q+R++ Y++G VS+ LL+
Sbjct: 153 SGVSA-------------RQRRMSGRRRGPGRKSVTVSPELMQSRNRIYLRGTVSKDLLT 199
Query: 209 HAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARE 268
H +V++LS KIK G+ L +S+LKEKLG EPS Q+A SL IS ELRA+ E LARE
Sbjct: 200 HKQVIQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLHISPPELRARMRESFLARE 259
Query: 269 RLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L MSN+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 260 MLTMSNIRLVISIAQKYDNLGVELADLIQ 288
>F2DCW4_HORVD (tr|F2DCW4) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 506
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 134/204 (65%), Gaps = 19/204 (9%)
Query: 106 YSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQ------------EKSSKKVAVTCSGVS 153
+S++A++LLQ+SMLEKQW L E + + S V V SGVS
Sbjct: 98 FSLDAIILLQRSMLEKQWKLPFEDDDGGGDGHHGDDIDSAEDDDGKSRSSSVVVARSGVS 157
Query: 154 ARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVV 213
ARQRR++ +R+ K GS A+ + ISPELLQ+R++ Y++G VS++LL+H +VV
Sbjct: 158 ARQRRMSGRRRGRSKKGSG-----AVHLS--ISPELLQSRNRIYLRGTVSKELLTHKQVV 210
Query: 214 KLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMS 273
LS+KIK G+ L + +S+L E LG EPS Q+A SL+IS ELR++ E LARE L MS
Sbjct: 211 HLSKKIKDGIWLQQQRSKLTEILGNEPSYKQMAQSLRISTPELRSRMRESFLAREVLTMS 270
Query: 274 NVRLVMSIAQRYDNMGAEMADLVQ 297
N+RLV+SIAQ+YD +G E++DL+Q
Sbjct: 271 NIRLVISIAQKYDKLGVELSDLIQ 294
>F2DWX1_HORVD (tr|F2DWX1) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 506
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 134/204 (65%), Gaps = 19/204 (9%)
Query: 106 YSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQ------------EKSSKKVAVTCSGVS 153
+S++A++LLQ+SMLEKQW L E + + S V V SGVS
Sbjct: 98 FSLDAIILLQRSMLEKQWKLPFEDDDGGGDGHHGDDIDSAEDDDGKSRSSSVVVARSGVS 157
Query: 154 ARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVV 213
ARQRR++ +R+ K GS A+ + ISPELLQ+R++ Y++G VS++LL+H +VV
Sbjct: 158 ARQRRMSGRRRGRSKKGSG-----AVHLS--ISPELLQSRNRIYLRGTVSKELLTHKQVV 210
Query: 214 KLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMS 273
LS+KIK G+ L + +S+L E LG EPS Q+A SL+IS ELR++ E LARE L MS
Sbjct: 211 HLSKKIKDGIWLQQQRSKLTEILGNEPSYKQMAQSLRISTPELRSRMRESFLAREVLTMS 270
Query: 274 NVRLVMSIAQRYDNMGAEMADLVQ 297
N+RLV+SIAQ+YD +G E++DL+Q
Sbjct: 271 NIRLVISIAQKYDKLGVELSDLIQ 294
>Q9ZP70_WHEAT (tr|Q9ZP70) Chloroplast sigma factor (Fragment) OS=Triticum
aestivum GN=sigA PE=2 SV=1
Length = 461
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 136/207 (65%), Gaps = 22/207 (10%)
Query: 106 YSVEALLLLQKSMLEKQWSLSCEREVL---------------TEHPRQEKSSKKVAVTCS 150
+S++A++LLQ+SMLEKQW L E E E + S V V S
Sbjct: 50 FSLDAIILLQRSMLEKQWQLPFEEEDDDDGGGDGHHVEAIGSAEDDDGKGRSSSVVVARS 109
Query: 151 GVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHA 210
GVSARQRR++ +R+ K GS A+ + ISPELLQ+R++ Y++G VS++LL+
Sbjct: 110 GVSARQRRMSGRRRGRSKKGSG-----AVHLS--ISPELLQSRNRIYLRGTVSKELLTQK 162
Query: 211 EVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERL 270
+VV LS+KIK G+ L + +S+LKEKLG EPS Q+A SL+IS ELR++ E LARE L
Sbjct: 163 QVVHLSKKIKDGIWLQQQRSKLKEKLGNEPSYKQMAQSLRISTPELRSRMRESFLAREVL 222
Query: 271 AMSNVRLVMSIAQRYDNMGAEMADLVQ 297
MSN+RLV+SIAQ+YD +G E++DL+Q
Sbjct: 223 TMSNIRLVISIAQKYDKLGVELSDLIQ 249
>A3BPX7_ORYSJ (tr|A3BPX7) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_26150 PE=2 SV=1
Length = 420
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 126/188 (67%), Gaps = 14/188 (7%)
Query: 115 QKSMLEKQWSLSCERE-----VLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKT 169
++SMLEKQW L + + + + S V V S VSARQRR++ +R+ K
Sbjct: 30 KRSMLEKQWELPFDDDNHAMAIGLAEDDDDTSKATVVVARSSVSARQRRMSGRRRGRTKN 89
Query: 170 GSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHK 229
G+A A +SPEL+Q+R++ Y++G VS++LL+H +VV LS KIK G+ L + +
Sbjct: 90 GAAHFA---------VSPELIQSRNRIYLRGTVSKELLTHKQVVHLSHKIKDGIWLQQQR 140
Query: 230 SRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMG 289
S+LKEKLG EPS Q+A SLKIS ELR++ E LARE L MSN+RLV+SIAQ+YDN+G
Sbjct: 141 SKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFLAREMLTMSNLRLVISIAQKYDNLG 200
Query: 290 AEMADLVQ 297
E+ADL+Q
Sbjct: 201 VELADLIQ 208
>Q7EY08_ORYSJ (tr|Q7EY08) Putative plastid RNA polymerase sigma factor OS=Oryza
sativa subsp. japonica GN=OJ9990_A01.116-1 PE=2 SV=1
Length = 388
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 123/185 (66%), Gaps = 14/185 (7%)
Query: 118 MLEKQWSLSCERE-----VLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSA 172
MLEKQW L + + + + S V V S VSARQRR++ +R+ K G+A
Sbjct: 1 MLEKQWELPFDDDNHAMAIGLAEDDDDTSKATVVVARSSVSARQRRMSGRRRGRTKNGAA 60
Query: 173 MQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRL 232
A +SPEL+Q+R++ Y++G VS++LL+H +VV LS KIK G+ L + +S+L
Sbjct: 61 HFA---------VSPELIQSRNRIYLRGTVSKELLTHKQVVHLSHKIKDGIWLQQQRSKL 111
Query: 233 KEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEM 292
KEKLG EPS Q+A SLKIS ELR++ E LARE L MSN+RLV+SIAQ+YDN+G E+
Sbjct: 112 KEKLGNEPSYKQLAHSLKISPPELRSRMHESFLAREMLTMSNLRLVISIAQKYDNLGVEL 171
Query: 293 ADLVQ 297
ADL+Q
Sbjct: 172 ADLIQ 176
>A2YRJ0_ORYSI (tr|A2YRJ0) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_27933 PE=2 SV=1
Length = 372
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 113/159 (71%), Gaps = 9/159 (5%)
Query: 139 EKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYV 198
+ S V V S VSARQRR++ +R+ K G+A A +SPEL+Q+R++ Y+
Sbjct: 11 DTSKATVVVARSSVSARQRRMSGRRRGRTKNGAAHFA---------VSPELIQSRNRIYL 61
Query: 199 KGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRA 258
+G VS++LL+H +VV LS KIK G+ L + +S+LKEKLG EPS Q+A SLKIS ELR+
Sbjct: 62 RGTVSKELLTHKQVVHLSHKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRS 121
Query: 259 KTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ E LARE L MSN+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 122 RMHESFLAREMLTMSNLRLVISIAQKYDNLGVELADLIQ 160
>Q7EY07_ORYSJ (tr|Q7EY07) Putative plastid RNA polymerase sigma factor OS=Oryza
sativa subsp. japonica GN=OJ9990_A01.116-2 PE=2 SV=1
Length = 342
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 91/113 (80%)
Query: 185 ISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQ 244
+SPEL+Q+R++ Y++G VS++LL+H +VV LS KIK G+ L + +S+LKEKLG EPS Q
Sbjct: 18 VSPELIQSRNRIYLRGTVSKELLTHKQVVHLSHKIKDGIWLQQQRSKLKEKLGNEPSYKQ 77
Query: 245 IAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+A SLKIS ELR++ E LARE L MSN+RLV+SIAQ+YDN+G E+ADL+Q
Sbjct: 78 LAHSLKISPPELRSRMHESFLAREMLTMSNLRLVISIAQKYDNLGVELADLIQ 130
>I1I198_BRADI (tr|I1I198) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI3G16040 PE=4 SV=1
Length = 531
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 129/204 (63%), Gaps = 8/204 (3%)
Query: 102 SDLGYSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKK-------VAVTCSGVSA 154
+L A++LLQ+SMLEKQW L E E E S V V SGVSA
Sbjct: 116 GELSLEATAIVLLQRSMLEKQWHLPFEDEDEDEEDDDAIGSGADAIGSAAVVVARSGVSA 175
Query: 155 RQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELL-QNRSKGYVKGVVSEQLLSHAEVV 213
R+RR++ +R+ + A +SP LL Q+R++ Y++G VS++LL+H +VV
Sbjct: 176 RERRMSGRRRGRSSSSKAKSGGGGGAQLGGVSPSLLMQSRNRIYLRGSVSKELLTHKQVV 235
Query: 214 KLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMS 273
+LS+KIK G+ L + +S+LKEKLG EPS Q+A SL+IS ELR++ + LARE L MS
Sbjct: 236 QLSKKIKDGIWLQQQRSKLKEKLGNEPSYKQMAQSLRISTPELRSRMRDSFLAREVLTMS 295
Query: 274 NVRLVMSIAQRYDNMGAEMADLVQ 297
N+RLV+SIAQ+YD +G E+ DL+Q
Sbjct: 296 NLRLVISIAQKYDKLGVELPDLIQ 319
>Q9ZTI2_MAIZE (tr|Q9ZTI2) RNA polymerase sigma factor 2 (Fragment) OS=Zea mays
GN=sig2 PE=2 SV=1
Length = 349
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 89/113 (78%)
Query: 185 ISPELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQ 244
ISPEL+Q+R++ Y++G VS+ LL+H +V++LS KIK G+ L +S+LKEKLG EPS Q
Sbjct: 25 ISPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQ 84
Query: 245 IAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+A SL+IS ELRA+ E LARE L MSN+RLV+SIA +YDN+G ++ADL+Q
Sbjct: 85 LAQSLRISAPELRARMRESFLAREMLTMSNIRLVISIAHKYDNLGVDLADLIQ 137
>K7L3F5_SOYBN (tr|K7L3F5) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 126
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 77/157 (49%), Gaps = 39/157 (24%)
Query: 1 MATAAVIXXXXXXXXXXXXXXXXDIIEKLSCSSDFGSTHYQIVPAKSVTVAKKSSDYTQA 60
MATAAVI DIIEKLS +GS+
Sbjct: 1 MATAAVIGLRGGKRLLNSSYHYFDIIEKLS----YGSS---------------------- 34
Query: 61 FPASDRPNQSIKALKEHVDGVPAAAETWFQECDSNDLEVESSDLGYSVEALLLLQKSMLE 120
L+ +VD P A+ WFQ +SNDLEVESS++GYSVEALLLLQKSMLE
Sbjct: 35 -------------LRTNVDDAPTIADPWFQNYNSNDLEVESSEMGYSVEALLLLQKSMLE 81
Query: 121 KQWSLSCEREVLTEHPRQEKSSKKVAVTCSGVSARQR 157
KQW+LS EREVLTE S+ C+ V+ R
Sbjct: 82 KQWNLSFEREVLTEKLSAGDVSRLEICPCAFVTFFPR 118
>M8CE31_AEGTA (tr|M8CE31) RNA polymerase sigma factor rpoD OS=Aegilops tauschii
GN=F775_32229 PE=4 SV=1
Length = 388
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 231 RLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGA 290
RLKEKLG EPS Q+A SL+IS ELR++ E LARE L MSN+RLV+SIAQ+YD +G
Sbjct: 110 RLKEKLGNEPSYKQMAQSLRISTPELRSRMRESFLAREVLTMSNIRLVISIAQKYDKLGV 169
Query: 291 EMADLVQ 297
E++DL+Q
Sbjct: 170 ELSDLIQ 176
>Q93V67_9BRYO (tr|Q93V67) PpSIG1 OS=Physcomitrella patens GN=Sig1 PE=2 SV=1
Length = 677
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 18/170 (10%)
Query: 142 SKKVAVTCSGVSARQRRINTKRK---IPGKTGSAMQACDAMQMRSL-----------ISP 187
+ ++ V SAR RR+ ++++ I GK S DA+ + L +
Sbjct: 295 TTELVVKSGSPSARTRRLESRQRRVAIAGKPTSP----DALTIHPLKKYQKGERVRRVKF 350
Query: 188 ELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAA 247
+ +Q+ Y++ + LL+ E V LS+K+++GL+L E + +L +LG PS+++ A
Sbjct: 351 DGVQDYLTTYLREITKINLLTKQEEVFLSKKLRIGLNLLEERKKLAAELGYVPSNEEWAP 410
Query: 248 SLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S +L K E AR+++ M+N+RLV+S+A++Y + G EMADL+Q
Sbjct: 411 HMNLSVGDLVRKLGEAEWARDKMVMANLRLVVSVAKQYHSFGLEMADLIQ 460
>E1C9S7_PHYPA (tr|E1C9S7) Plastid sigma factor SIG1 OS=Physcomitrella patens
subsp. patens GN=PpSig1 PE=4 SV=1
Length = 677
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 18/170 (10%)
Query: 142 SKKVAVTCSGVSARQRRINTKRK---IPGKTGSAMQACDAMQMRSL-----------ISP 187
+ ++ V SAR RR+ ++++ I GK S DA+ + L +
Sbjct: 295 TTELVVKSGSPSARTRRLESRQRRVAIAGKPTSP----DALTIHPLKKYQKGERVRRVKF 350
Query: 188 ELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAA 247
+ +Q+ Y++ + LL+ E V LS+K+++GL+L E + +L +LG PS+++ A
Sbjct: 351 DGVQDYLTTYLREITKINLLTKQEEVFLSKKLRIGLNLLEERKKLAAELGYVPSNEEWAP 410
Query: 248 SLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S +L K E AR+++ M+N+RLV+S+A++Y + G EMADL+Q
Sbjct: 411 HMNLSVGDLVRKLGEAEWARDKMVMANLRLVVSVAKQYHSFGLEMADLIQ 460
>M1CIG3_SOLTU (tr|M1CIG3) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400026491 PE=4 SV=1
Length = 259
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 251 ISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ R++L++ IEC+LARERL+MSNVRLVMSIAQRYDNMGAEMADLVQ
Sbjct: 1 MPRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 47
>K0ITD8_MARPO (tr|K0ITD8) Plastid RNA polymerase sigma factor 1 OS=Marchantia
polymorpha GN=Mpsig1 PE=2 SV=1
Length = 574
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 35/219 (15%)
Query: 114 LQKSMLEKQWSLSCEREVLTEHPR---------------QEKSS--------KKVAVTCS 150
L++S LE QWSL V P QE+ S K V V S
Sbjct: 140 LERSRLESQWSLFLSDAVDRPLPNLEGMGEDFGEEVVDVQEEDSANGLSDGLKAVKVISS 199
Query: 151 G-VSARQRRINTK-RKIPG-KTGSAMQACDAMQMRSLIS---------PELLQNRSKGYV 198
G SAR RR+ + R++ G + S M+A +R S PE +Q+ Y+
Sbjct: 200 GRPSARLRRLEARQRRLSGVEKPSPMEAFMIHPLRKTESSSKADKAKKPEGVQDYLSTYL 259
Query: 199 KGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRA 258
+ + L+ E + LS+KI+ G L E + + + LG + DQ A + ++ +L A
Sbjct: 260 RDITKIDRLTAEEEIMLSKKIRTGYILKEERKKFERALGHPITKDQWAGHMHMAVGDLDA 319
Query: 259 KTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ E LAR+R+ M+N+RLV+S+ ++Y+ G E+ DL+Q
Sbjct: 320 QLHEAELARDRMVMANLRLVVSVVKQYNCEGLEVPDLIQ 358
>M0V4S3_HORVD (tr|M0V4S3) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 237
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 19/138 (13%)
Query: 106 YSVEALLLLQKSMLEKQWSLSCEREVLTEHPRQEKSSKK------------VAVTCSGVS 153
+S++A++LLQ+SMLEKQW L E + V V SGVS
Sbjct: 98 FSLDAIILLQRSMLEKQWKLPFEDDDGGGDGHHGDDIDSAEDDDDKSRSSSVVVARSGVS 157
Query: 154 ARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVV 213
ARQRR++ +R+ K GS A+ + ISPELLQ+R++ Y++G VS++LL+H +VV
Sbjct: 158 ARQRRMSGRRRGRSKKGSG-----AVHLS--ISPELLQSRNRIYLRGTVSKELLTHKQVV 210
Query: 214 KLSEKIKVGLSLDEHKSR 231
LS+KIK G+ L + +S+
Sbjct: 211 HLSKKIKDGIWLQQQRSK 228
>Q2JRK5_SYNJA (tr|Q2JRK5) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-3-3Ab) GN=CYA_2635 PE=3 SV=1
Length = 361
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 62/91 (68%)
Query: 207 LSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLA 266
+ HAE ++LS KI+ L +D+ + +++ G +PSD+++AA+L+I S LR++ + A
Sbjct: 65 IDHAEEIELSRKIQQKLLIDQARREWRQQWGQDPSDEELAAALQIPVSTLRSRIRQGEQA 124
Query: 267 RERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +L +N+RLV+S+A++Y N G DL+Q
Sbjct: 125 QRKLINANLRLVVSVAKKYLNRGVPFLDLIQ 155
>Q9MTH3_SINAL (tr|Q9MTH3) Sigma factor 2 (Precursor) OS=Sinapis alba GN=sig2 PE=2
SV=1
Length = 575
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
Query: 124 SLSCEREVLTE-HPRQEKSSKKVAVTCSGVSARQRRINTKRKIPG--KTGSAMQAC---- 176
SL C +E + P +++ +K++V+ + S RQ R++ G KT S MQ+
Sbjct: 183 SLECNKEASDDLTPAEKQEVEKLSVSSAVRSTRQTE-RKARRVKGLEKTASGMQSSVKTG 241
Query: 177 DAMQMRSLISPELLQNRSKGYVKGVVSE-QLLSHAEVVKLSEKIKVGLSLDEHKSRLKEK 235
+ + + + S E+ N Y++ S +LL+ E +LSE I+ L L+ ++ L E+
Sbjct: 242 SSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTAREEQQLSEGIQDLLKLERLQAELTER 301
Query: 236 LGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADL 295
G +P+ Q A++ + + LR + T ++R+ SN+RLV+SIA+ Y G + DL
Sbjct: 302 CGHQPTFSQWASAAGVDKKTLRKRITHGTQCKDRMIKSNIRLVISIAKNYQGAGMDFQDL 361
Query: 296 VQ 297
VQ
Sbjct: 362 VQ 363
>K4BJF0_SOLLC (tr|K4BJF0) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc03g097330.1 PE=4 SV=1
Length = 144
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 130 EVLTEHPRQEKSSKKVAVTCSGVSARQRRINTKRKIPGKTGSAMQACDAMQMRSLISPEL 189
E LT P+ EK KK+ + CSG AR+RR +++ G+ SA +RS++ P+L
Sbjct: 29 ETLTASPQHEKKCKKMHICCSGTPARRRR----QRVLGQKSSATPISATKPLRSILRPKL 84
Query: 190 LQNRSKGYVKGVVSEQLLSHA 210
LQNR KGYVK V SE LL+H
Sbjct: 85 LQNRLKGYVKSVESEGLLTHT 105
>K9YEA1_HALP7 (tr|K9YEA1) RNA polymerase sigma factor OS=Halothece sp. (strain
PCC 7418) GN=PCC7418_3051 PE=3 SV=1
Length = 375
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L++++K+ + + L EKLG P+ Q+A +L++ E
Sbjct: 68 AFFKEMARYPLLQPDEEVELAQQVKLAADFEHKRQELAEKLGSPPTKQQLAEALEMGVKE 127
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L K + +A+ R+ SN+RLV+SIA+RY N G DL+Q
Sbjct: 128 LDRKLYQGRVAKRRMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 169
>Q2JNL1_SYNJB (tr|Q2JNL1) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=CYB_0662 PE=3 SV=1
Length = 361
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 61/91 (67%)
Query: 207 LSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLA 266
+ HAE ++LS KI+ L +D+ + +++ G +PSD+ +A +L+IS S LR++ + A
Sbjct: 65 IDHAEEIELSRKIQQKLLIDQARQEWRQQRGEDPSDEALAEALQISVSTLRSRIRQGEQA 124
Query: 267 RERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +L +N+RLV+S+A++Y N G DL+Q
Sbjct: 125 QRKLINANLRLVVSVAKKYLNRGVPFLDLIQ 155
>K9VNL0_9CYAN (tr|K9VNL0) RNA polymerase sigma factor OS=Oscillatoria
nigro-viridis PCC 7112 GN=Osc7112_5455 PE=3 SV=1
Length = 357
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 63/92 (68%)
Query: 206 LLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTL 265
LL+ AE V+L+ +++ ++LDE + RL+++L P+ ++AA+L IS ++L+ +C
Sbjct: 59 LLTAAEEVELARRVQELVALDELEQRLQQELDRVPTKAELAAALGISETQLQQLRHQCQS 118
Query: 266 ARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 119 AKRKMISSNLRLVVSIAKRYLNRGVPFLDLIQ 150
>A5GQ42_SYNR3 (tr|A5GQ42) RNA polymerase sigma factor OS=Synechococcus sp.
(strain RCC307) GN=rpoD PE=3 SV=1
Length = 324
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 64/103 (62%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH + + L +++ + L+E ++ K + G EPS +++A+S IS +
Sbjct: 18 RSYLRDIGRVPLLSHEQEITLGRQVQELVRLEEAEAEFKMRQGHEPSREELASSFGISPA 77
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + I A+ER+ +N+RLV+S+A++Y E+ DL+Q
Sbjct: 78 VLRRRLINGRRAKERMVAANLRLVVSVAKKYTKRNMELLDLIQ 120
>B9IPZ1_POPTR (tr|B9IPZ1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_780378 PE=4 SV=1
Length = 564
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 197 YVKGV-VSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ +G S +LLS E V+LSE I+ L L+ + LKE+ G +P+ Q AA+ ++ +
Sbjct: 256 FFRGASTSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQIT 315
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + L ++++ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 316 LRKRLNYAILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 357
>F5UJI7_9CYAN (tr|F5UJI7) RNA polymerase sigma factor OS=Microcoleus vaginatus
FGP-2 GN=MicvaDRAFT_0962 PE=3 SV=1
Length = 357
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 62/92 (67%)
Query: 206 LLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTL 265
LL+ E V+L+ +++ ++LDE + RL+++L P+ ++AA+L IS ++L+ +C
Sbjct: 59 LLTATEEVELARRVQELVALDEVEQRLQQELDRVPTKAELAAALGISETQLQQLRHQCQS 118
Query: 266 ARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 119 AKRKMISSNLRLVVSIAKRYLNRGVPFLDLIQ 150
>M4DQ26_BRARP (tr|M4DQ26) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra018617 PE=4 SV=1
Length = 573
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 145 VAVTCSGVSARQRRINTKR-KIPGKTGSAMQAC----DAMQMRSLISPELLQNRSKGYVK 199
VAV+ + S RQ +R K KT S MQ+ + + + + S E+ N Y++
Sbjct: 203 VAVSSAVRSTRQTERKARRAKGLEKTASGMQSAVKTVSSSRKKRVASQEIDNNDPLRYLR 262
Query: 200 GVVSE-QLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRA 258
S +LL+ E +LSE I+ L L+ ++ L E+ G +P+ Q A++ I + LR
Sbjct: 263 MTTSSSKLLTAREEQQLSEGIQDLLKLERLQAELTERCGHQPTLAQWASAAGIDKKTLRK 322
Query: 259 KTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ T ++R+ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 323 RITHGTQCKDRMIKSNIRLVISIAKNYQGAGMDFQDLVQ 361
>M0TES6_MUSAM (tr|M0TES6) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 548
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 197 YVKGVVS-EQLLSHAEVVKLSEKIKVG---------LSLDEHKSRLKEKLGCEPSDDQIA 246
Y++G S +LL+ AE V+LSE I+ L L+ + L E+ GC+P+ Q A
Sbjct: 231 YLRGTTSTSRLLTAAEEVELSEGIQTYSKILFNGDLLKLERLQQDLTERNGCQPTFAQWA 290
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
A+ I + LR + T ++++ SN+RLV+SIA+ Y + G + DLVQ
Sbjct: 291 AAAGIDQKVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGMNLQDLVQ 341
>Q8ZSA3_NOSS1 (tr|Q8ZSA3) RNA polymerase sigma factor OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=all7608 PE=3 SV=1
Length = 323
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 66/103 (64%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ +V LL+H E + S++++ + L + K LK++L EPS ++A +++S
Sbjct: 16 RNYLQDIVRVPLLTHEEEIVYSKQVQQMMVLQKKKETLKKQLNHEPSQKELAKYVQLSEI 75
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
E++ + T A++++ ++N+RLV++IA++Y E+ DL+Q
Sbjct: 76 EVKDIFQQGTQAKQKMMVANLRLVVAIAKKYQRRNLELMDLIQ 118
>K9YFR5_HALP7 (tr|K9YFR5) RNA polymerase sigma factor OS=Halothece sp. (strain
PCC 7418) GN=PCC7418_3695 PE=3 SV=1
Length = 394
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + +LL E ++L+ KI L L+ ++ L+ +GCEP+D++ A + + +
Sbjct: 88 YLQEIGRIRLLRADEEIELARKIADLLELERKRTELEATIGCEPTDEEWAEEVDMPLQKF 147
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R + + A+E++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 148 RRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 188
>D7UB90_VITVI (tr|D7UB90) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_15s0024g00640 PE=4 SV=1
Length = 575
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 197 YVKGVVS-EQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++G S +LL+ E ++LSE I+ L L++ + L+E+ G +P+ Q AA+ + +
Sbjct: 267 YLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKT 326
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR +T ++++ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 327 LRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQ 368
>D7LJA3_ARALL (tr|D7LJA3) RNA polymerase sigma-70 factor OS=Arabidopsis lyrata
subsp. lyrata GN=SIGF PE=4 SV=1
Length = 546
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Query: 157 RRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLS 216
++IN K+K K G + DA+Q+ ++ G ++QLL+ E +L
Sbjct: 216 QKINAKKKF--KQG--VDTDDALQL---------------FLWGPETKQLLTAKEEAELI 256
Query: 217 EKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVR 276
I+ L L++ K++L+ + GCEP+ + A ++ IS +L+++ +RE+L +N+R
Sbjct: 257 SHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPDLKSEIHRGRSSREKLITANLR 316
Query: 277 LVMSIAQRYDNMGAEMADLVQ 297
LV+ IA++Y N G DL+Q
Sbjct: 317 LVVHIAKQYQNRGLNFQDLLQ 337
>G6FNJ2_9CYAN (tr|G6FNJ2) RNA polymerase sigma factor OS=Fischerella sp. JSC-11
GN=FJSC11DRAFT_0439 PE=3 SV=1
Length = 389
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 62/102 (60%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ ++E ++ L+++LG +P+ IAA L+I+ +
Sbjct: 81 AFFKEMARYPLLKPDEEVELARRVRFLEEVNEIQAALRQELGHQPTKASIAAHLQITEKQ 140
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 141 LENRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 182
>K9QH57_9NOSO (tr|K9QH57) RNA polymerase sigma factor OS=Nostoc sp. PCC 7107
GN=Nos7107_3946 PE=3 SV=1
Length = 377
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 62/102 (60%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ + E ++ L+E+LG +P+ Q+AA L ++ +
Sbjct: 69 AFFKEMARYPLLKADEEVELARRVRFLEEVREIQAALQEQLGQQPTKVQVAAQLDLTEKQ 128
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L ++ + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 129 LESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 170
>B1X4M1_PAUCH (tr|B1X4M1) Type II alternative RNA polymerase sigma factor,
sigma-70 family protein OS=Paulinella chromatophora
GN=rpoD PE=4 SV=1
Length = 321
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 65/103 (63%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y+K + LL+H + + L +++ + + E + +L+ K G +P+ +++A SL +S +
Sbjct: 16 RSYLKEISRIPLLTHEQEITLGRQVQELICIQETEQKLELKNGIKPTQEELANSLDLSIN 75
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+++ K I A+E++ SN+RLV+SIA++Y E+ DLVQ
Sbjct: 76 QVKRKIIHGKRAKEQMVSSNLRLVVSIAKKYTKRSMELLDLVQ 118
>B9SDA3_RICCO (tr|B9SDA3) RNA polymerase sigma factor rpoD1, putative OS=Ricinus
communis GN=RCOM_1515490 PE=4 SV=1
Length = 569
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 197 YVKGVVS-EQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++G S +LL+ +E ++LS I+ L L+ + L E+ G +P+ Q AA+ + +
Sbjct: 261 YLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRT 320
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + T+ ++++ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 321 LRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 362
>K9ZQP5_ANACC (tr|K9ZQP5) RNA polymerase sigma factor OS=Anabaena cylindrica
(strain ATCC 27899 / PCC 7122) GN=Anacy_5807 PE=3 SV=1
Length = 328
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ +V LL+H E + S++++ ++L K LK++L EPS ++A +++S
Sbjct: 21 RNYLQDIVRVPLLTHEEEISSSKQVQQMITLQNKKETLKKQLNHEPSQKELAQYVQLSEM 80
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
E++ + A++++ +N+RLV+SIA++Y E DL+Q
Sbjct: 81 EVKEIFQKGVQAKQKMIAANLRLVVSIAKKYQGRNVEFMDLIQ 123
>K7W742_9NOST (tr|K7W742) RNA polymerase sigma factor OS=Anabaena sp. 90 GN=sigE
PE=3 SV=1
Length = 389
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 62/102 (60%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ + E ++ L+ +LG +PS Q+A+ L+I+ +
Sbjct: 81 AFFKEMARYPLLKPDEEVELARRVRFLEEVKELQAALELQLGAQPSKVQVASQLEITEKQ 140
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L ++ + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 141 LESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 182
>B4VH85_9CYAN (tr|B4VH85) RNA polymerase sigma factor OS=Coleofasciculus
chthonoplastes PCC 7420 GN=MC7420_7244 PE=3 SV=1
Length = 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 60/102 (58%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E ++L+ +++ + +DE RL ++LG +P++ ++A +L ++ +
Sbjct: 66 AFFKEMARYPLLKPEEEIELATQVQFLVEMDEMTERLHQELGRKPTNAELAQALDLTERQ 125
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +++ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 126 FENRLYRGQISKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 167
>I1ILU6_BRADI (tr|I1ILU6) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI4G19540 PE=4 SV=1
Length = 552
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
G + + +LL+ E V+LS I+ L L+ ++ L E GC+P+ Q AA+
Sbjct: 241 GSLWKLTGRKLLTAKEEVELSNGIQDLLKLEAIQAELAEYSGCQPTFPQWAAAAGTDEKT 300
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + ++ R+ SNVRLV+SIA+ ++ G E+ DL+Q
Sbjct: 301 LRKRLAHGIYSKNRMVTSNVRLVISIAREFEGPGLELYDLIQ 342
>K9VYT8_9CYAN (tr|K9VYT8) RNA polymerase sigma factor OS=Crinalium epipsammum PCC
9333 GN=Cri9333_2246 PE=3 SV=1
Length = 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V L+ +++ L ++E + RL+ +L +PS +IA SL ++ +
Sbjct: 65 AFFKEMARYPLLKAEEEVDLANQVQFILQIEEIEERLEAQLNHKPSKAEIAESLGMNEKQ 124
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 125 LDHRLYQSRVAKRKMIRSNLRLVVSIAKRYLNRGVAFLDLIQ 166
>B9I6F1_POPTR (tr|B9I6F1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_834586 PE=4 SV=1
Length = 567
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%)
Query: 211 EVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERL 270
E V+LSE I+ L L+ + LKE+ G EPS Q AA+ + + LR + L ++++
Sbjct: 274 EEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKM 333
Query: 271 AMSNVRLVMSIAQRYDNMGAEMADLVQ 297
SNVRLV+SIA+ Y G + DLVQ
Sbjct: 334 IKSNVRLVISIAKNYQGTGMNLQDLVQ 360
>Q3ANG0_SYNSC (tr|Q3ANG0) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9605) GN=Syncc9605_0093 PE=3 SV=1
Length = 335
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 62/103 (60%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H + + L +++ + L+ +S LK K G +PS DQ+A + +S
Sbjct: 29 RSYLRDIGRVPLLTHEQEITLGRQVQELMDLESLESELKSKAGEKPSRDQLAKASGLSSI 88
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+L+ K A+ER+ +N+RLV+S+A++Y E+ DL+Q
Sbjct: 89 QLKRKLQHGRRAKERMVAANLRLVVSVAKKYTKRNMELLDLIQ 131
>R0FW66_9BRAS (tr|R0FW66) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022939mg PE=4 SV=1
Length = 456
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
++ G ++QLL+ E +L I+ L L++ K++L+ + GCEP+ + A ++ IS L
Sbjct: 238 FLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVL 297
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+++ +RE+L +N+RLV+ IA++Y N G DL+Q
Sbjct: 298 KSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQ 338
>Q710C3_SPIOL (tr|Q710C3) Sigma factor OS=Spinacia oleracea GN=sig2 PE=2 SV=2
Length = 575
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 197 YVKGVV-SEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++G S +LL+ +E +LS I+ L L++ LK + G PS Q AA+ I +
Sbjct: 267 YLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRT 326
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + T ++++ SNVRLV+SIA+ Y G + DLVQ
Sbjct: 327 LRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQ 368
>Q7NEW6_GLOVI (tr|Q7NEW6) RNA polymerase sigma factor OS=Gloeobacter violaceus
(strain PCC 7421) GN=gll3762 PE=3 SV=1
Length = 362
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 63/101 (62%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + LL E V+L+++++ + L K L+ LG E SD+Q A + K+ EL
Sbjct: 54 YLQEIGRVPLLGRDEEVELAQQVQKLMKLTALKESLQTSLGSEYSDEQWAEAAKVGLFEL 113
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ + + + A++++ +N+RLV+S+A++Y N G E+ DLVQ
Sbjct: 114 KRQVLAGSRAKKKMIEANLRLVVSVAKKYQNRGLELLDLVQ 154
>F4XUA7_9CYAN (tr|F4XUA7) RNA polymerase sigma factor OS=Moorea producens 3L
GN=LYNGBM3L_33270 PE=3 SV=1
Length = 373
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 59/102 (57%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V L+ ++K + +D + L+EKL +P+ ++AA+++++ +
Sbjct: 65 AFFKEMARYPLLKPDEEVDLARRVKFLVEIDHLHNSLQEKLDRKPTKAEVAAAVEMTERQ 124
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 125 LEGNLYRGRVAKRKMIRSNLRLVVSIAKRYINRGVPFLDLIQ 166
>K9V823_9CYAN (tr|K9V823) RNA polymerase sigma factor OS=Calothrix sp. PCC 6303
GN=Cal6303_4965 PE=3 SV=1
Length = 387
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ E ++ LKEK G +PS ++AA ++ +
Sbjct: 79 AFFKEMARYPLLKADEEVELARRVRFLEEWREAQAALKEKSGNQPSKAEVAAEFSLTERQ 138
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 139 LENRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 180
>D7E5B4_NOSA0 (tr|D7E5B4) RNA polymerase sigma factor OS=Nostoc azollae (strain
0708) GN=Aazo_3985 PE=3 SV=1
Length = 389
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 62/102 (60%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ + + ++ L+E+LG +PS ++AA +++ +
Sbjct: 81 AFFKEMARYPLLKPDEEVELARRVRFLEEVKDLQAALEEELGQQPSRSEVAAKFEMTEKQ 140
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L ++ + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 141 LESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 182
>K0ISZ8_MARPO (tr|K0ISZ8) Plastid RNA polymerase sigma factor 2 OS=Marchantia
polymorpha GN=Mpsig2 PE=2 SV=1
Length = 615
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 65/107 (60%)
Query: 191 QNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLK 250
Q+ + Y++ + +LL+ +E ++L+E I+ L ++ K+ L+E++G EP+ + A ++
Sbjct: 302 QDPVRAYLRDIGKTKLLTSSEEIELAEGIQDLLRVESVKNDLREQMGREPTLMEWAKAVG 361
Query: 251 ISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R L ++ ++R+ SN+RLV+SIA+RY G + DL+Q
Sbjct: 362 TERHSLESRIKSGQACKDRMVNSNLRLVVSIAKRYQGRGMTIQDLIQ 408
>Q53KH7_ORYSJ (tr|Q53KH7) Sigma-70 region 3, putative OS=Oryza sativa subsp.
japonica PE=2 SV=1
Length = 368
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 191 QNRSKGYVKG---------VVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPS 241
+ RSKG G + +LL+ E V+ SE I+ L L+ ++ L E G +P+
Sbjct: 239 KKRSKGASSGTNPLGSLWKMTGRRLLTAKEEVEFSEGIQDLLKLEAIQAELAEYNGGQPT 298
Query: 242 DDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQVII 300
Q A + + LR + + R+ SNVRLV+SIA+ ++ G E+ DL+QV I
Sbjct: 299 FAQWATAAGVDERTLRKRLDHGIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQVFI 357
>M0TIC0_MUSAM (tr|M0TIC0) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 548
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 197 YVKGVVS-EQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++G S +LLS E ++LS+ I+ L L+ + L + G +P+ Q A + I +
Sbjct: 240 YLRGTTSTSKLLSAVEELELSKGIQDLLKLERLREELVGRNGGQPTFAQWATAAGIDQKT 299
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + + T ++++ SN+RLV+SIA+ Y N G + DLVQ
Sbjct: 300 LRKRLNDGTFCKDKMIKSNIRLVISIAKNYQNAGLSLQDLVQ 341
>R0HNL5_9BRAS (tr|R0HNL5) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022939mg PE=4 SV=1
Length = 547
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
++ G ++QLL+ E +L I+ L L++ K++L+ + GCEP+ + A ++ IS L
Sbjct: 238 FLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVL 297
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+++ +RE+L +N+RLV+ IA++Y N G DL+Q
Sbjct: 298 KSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQ 338
>B8HU39_CYAP4 (tr|B8HU39) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=Cyan7425_0568 PE=3 SV=1
Length = 372
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 61/102 (59%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
++K + LL +E ++L+ ++K + L E K +L +LG + ++AA++ ++ +
Sbjct: 64 AFLKDMARYPLLQPSEEIELARRVKYLVELSELKDQLGRQLGRSATLPEVAAAMNLTEQQ 123
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L+ + +A+ ++ SN+RLV+SIA+RY N G DLVQ
Sbjct: 124 LQIRIYRGQVAKSKMIRSNLRLVVSIAKRYLNRGVPFLDLVQ 165
>B2J5S6_NOSP7 (tr|B2J5S6) RNA polymerase sigma factor OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=Npun_F0307 PE=3 SV=1
Length = 378
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 61/102 (59%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ + E ++ L KLG EP+ +IA+ L+++ +
Sbjct: 70 AFFKEMARYPLLKADEEVELARRVRFLEEIRELQAALNLKLGQEPTKLEIASELEMTEKQ 129
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L ++ + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 130 LESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 171
>Q3MDW4_ANAVT (tr|Q3MDW4) RNA polymerase sigma factor OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=Ava_1198 PE=3 SV=1
Length = 378
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 60/102 (58%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ + + ++ L+ +LG P+ Q+AA L+I+ +
Sbjct: 70 AFFKEMARYPLLKPDEEVELARRVRFLEEVRDLQADLQLQLGLHPTKAQVAAQLEITEKQ 129
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 130 LENRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 171
>K9WA21_9CYAN (tr|K9WA21) RNA polymerase sigma factor OS=Microcoleus sp. PCC 7113
GN=Mic7113_1172 PE=3 SV=1
Length = 377
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V L++ ++ + +D+ + RL+ LG +P+ ++A L ++ +
Sbjct: 69 AFFKEMARYPLLKPEEEVDLAKNVQFLVEIDQLQERLQANLGRKPAKAELAQQLNMTERQ 128
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 129 LENRLYRGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 170
>K9YVD0_DACSA (tr|K9YVD0) RNA polymerase sigma factor OS=Dactylococcopsis salina
PCC 8305 GN=Dacsa_1820 PE=3 SV=1
Length = 375
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
+ K + LL E ++L++K+K ++ + L + G P+ +++AA++ +S EL
Sbjct: 69 FFKEMARYPLLQPDEEIELAQKVKFLADMENKRQELAIESGSSPTKEELAATVSLSVKEL 128
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
K + LA+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 129 ERKLHQGRLAKRQMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 169
>M4DL32_BRARP (tr|M4DL32) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra017213 PE=4 SV=1
Length = 533
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
++ G ++QLL+ E +L I+ + L++ K++L+ + GCEP+ + A +L IS L
Sbjct: 224 FLWGPETKQLLTAKEEAELITHIQNLIKLEKVKTKLESQNGCEPTIAEWAEALGISGPVL 283
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+++ +RE+L +N+RLV+ IA++Y N G DL+Q
Sbjct: 284 KSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQ 324
>F2HHX7_9CRYP (tr|F2HHX7) RNA-polymerase sigma factor OS=Cryptomonas paramecium
GN=rpoD PE=4 SV=1
Length = 414
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + +LL E ++L+ +I L + K LKEKLG EP+ + +A+ KIS
Sbjct: 87 RWYLQLIGKVKLLKPEEEIQLAREISQLLQWEHIKVFLKEKLGREPTALEWSAACKISDV 146
Query: 255 ELRAKTI--ECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ + KT+ A+ER+ +N+RLV+SIA+RY N G + DLVQ
Sbjct: 147 Q-KFKTVLYNSRKAKERMIAANLRLVVSIAKRYSNRGMSLQDLVQ 190
>K4AY41_SOLLC (tr|K4AY41) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc01g081490.2 PE=4 SV=1
Length = 613
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 197 YVKGVV-SEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++G S +LL+ +E +LS I+ L L+ + L E+ G +P+ Q AA+ + +
Sbjct: 305 YLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMT 364
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + L ++++ SNVRLV+SIA+ Y +G + DLVQ
Sbjct: 365 LRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQ 406
>M1D2M3_SOLTU (tr|M1D2M3) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400031111 PE=4 SV=1
Length = 613
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 197 YVKGVV-SEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++G S +LL+ +E +LS I+ L L+ + L E+ G +P+ Q AA+ + +
Sbjct: 305 YLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMT 364
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + L ++++ SNVRLV+SIA+ Y +G + DLVQ
Sbjct: 365 LRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQ 406
>I4I200_MICAE (tr|I4I200) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9808 GN=rpoD PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>Q39477_CYACA (tr|Q39477) RNA polymerase sigma factor (Fragment) OS=Cyanidium
caldarium GN=sigma subunit PE=4 SV=1
Length = 609
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
++K + S LL+ ++VV L+ +I+ + + +L+ + G EP + A +L +S E
Sbjct: 263 AFLKEIGSVPLLTESQVVSLAREIRKLALWNATRIQLRHEYGKEPDRTEWAKALNMSAEE 322
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + ARE L +N+RLV+S+A+++ N G M DL+Q
Sbjct: 323 LTRNLLRAQRARESLVAANLRLVVSVAKQFTNRGLSMQDLIQ 364
>L7E3E5_MICAE (tr|L7E3E5) RNA polymerase sigma factor OS=Microcystis aeruginosa
TAIHU98 GN=rpoD-1 PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>I4GLZ5_MICAE (tr|I4GLZ5) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 7941 GN=rpoD PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>I4FIK9_MICAE (tr|I4FIK9) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9432 GN=rpoD PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>E4MX68_THEHA (tr|E4MX68) mRNA, clone: RTFL01-17-E04 OS=Thellungiella halophila
PE=2 SV=1
Length = 547
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 19/141 (13%)
Query: 157 RRINTKRKIPGKTGSAMQACDAMQMRSLISPELLQNRSKGYVKGVVSEQLLSHAEVVKLS 216
++IN K+K+ K G DA+Q+ ++ G ++QLL+ E +L
Sbjct: 217 QKINAKKKM--KQG--FDTDDALQL---------------FLWGPETKQLLTAKEEAELI 257
Query: 217 EKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIECTLARERLAMSNVR 276
I+ + L++ K++L+ + GCEP+ + A ++ +S L+++ +RE+L +N+R
Sbjct: 258 AHIQHLIKLEKVKTKLESQNGCEPTIGEWAEAMGLSSPVLKSEIHRGRSSREKLITANLR 317
Query: 277 LVMSIAQRYDNMGAEMADLVQ 297
LV+ IA++Y N G DL+Q
Sbjct: 318 LVVHIAKQYQNRGLNFQDLLQ 338
>L8NM63_MICAE (tr|L8NM63) RNA polymerase sigma factor rpoD2 OS=Microcystis
aeruginosa DIANCHI905 GN=rpoD2 PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>A8YAB5_MICAE (tr|A8YAB5) Genome sequencing data, contig C249 OS=Microcystis
aeruginosa PCC 7806 GN=IPF_6533 PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>Q55525_SYNY3 (tr|Q55525) RNA polymerase sigma factor OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=rpoD PE=3 SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 30 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 89
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 90 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 140
>F7URP3_SYNYG (tr|F7URP3) RNA polymerase sigma factor OS=Synechocystis sp.
(strain PCC 6803 / GT-S) GN=rpoD PE=3 SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 30 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 89
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 90 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 140
>E0UIU1_CYAP2 (tr|E0UIU1) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Cyanothece sp. (strain PCC 7822) GN=Cyan7822_1402
PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 61/103 (59%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + L+++++ ++L E K L + L EP + + A + KIS
Sbjct: 12 RAYLREIGRVPLLTHEEEIVLAKRVQRSMALQEIKDTLTKNLSREPLEHEWAEAAKISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
ELR A+E++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 ELRRTMAAGKAAKEKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>M1MBB9_9SYNC (tr|M1MBB9) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 GN=rpoD PE=3 SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 30 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 89
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 90 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 140
>H0PFH3_9SYNC (tr|H0PFH3) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-P GN=rpoD PE=3 SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 30 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 89
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 90 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 140
>H0PAJ0_9SYNC (tr|H0PAJ0) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-N GN=rpoD PE=3 SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 30 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 89
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 90 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 140
>H0NY38_9SYNC (tr|H0NY38) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. GT-I GN=rpoD PE=3 SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 30 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 89
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 90 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 140
>I4ISK0_MICAE (tr|I4ISK0) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9701 GN=rpoD PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + +++++ + L++ K LK KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLKAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>I4G0I4_MICAE (tr|I4G0I4) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9443 GN=rpoD PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>M4EPL2_BRARP (tr|M4EPL2) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra030732 PE=4 SV=1
Length = 570
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 203 SEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKTIE 262
S +LL+ E +LSE I+ L L+ + L E+ G +P+ Q A++ + + LR +
Sbjct: 268 SSKLLTAREETELSEGIQDLLKLERLQVELTERCGHQPTFGQWASAAGVDQKTLRKRINH 327
Query: 263 CTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
T ++R+ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 328 GTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQ 362
>I4H5M1_MICAE (tr|I4H5M1) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9807 GN=rpoD PE=4 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>L8AT57_9SYNC (tr|L8AT57) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 GN=rpoD PE=3 SV=1
Length = 328
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P + + Y+ + LL+H + + L ++++ ++L EHK L ++LG EPSD + A
Sbjct: 13 PTFTADMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWA 72
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ +S ++L + A+ ++ +N+RLV++IA++Y E DL+Q
Sbjct: 73 EAADLSVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQ 123
>B4WMN7_9SYNE (tr|B4WMN7) RNA polymerase sigma factor OS=Synechococcus sp. PCC
7335 GN=S7335_1807 PE=3 SV=1
Length = 467
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E ++L+ ++++ + ++++ + E L P+ ++A + + +
Sbjct: 159 AFFKEMARYPLLQPTEEIELARQVRIIVEIEDYSEKASETLKRRPTHAELATAFGYTEGQ 218
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR K + A+ R+ SN+RLV+SIA+RY N G DL+Q
Sbjct: 219 LRQKLRQARAAKRRMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 260
>R7QJX2_CHOCR (tr|R7QJX2) Stackhouse genomic scaffold, scaffold_331 OS=Chondrus
crispus GN=CHC_T00005988001 PE=4 SV=1
Length = 506
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 61/111 (54%)
Query: 187 PELLQNRSKGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIA 246
P L N + Y++ + ++LL E V L +I+ + L + +G +PS ++ A
Sbjct: 187 PTLADNTVRWYLQLIGGDRLLRAEEEVTLGRQIRDLMQWQRMFVELADSIGRQPSTNEWA 246
Query: 247 ASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ + ++ + + A++R+ + N+RLV+SIA+RY N G ++DL+Q
Sbjct: 247 QYMGMDETDFATRLLHAKRAKDRMIVCNLRLVVSIAKRYMNRGMPLSDLIQ 297
>M2W1U4_GALSU (tr|M2W1U4) RNA polymerase primary sigma factor OS=Galdieria
sulphuraria GN=Gasu_28760 PE=4 SV=1
Length = 601
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
++K + S LL+ +V+ L+ +I+ + + +L+++ G EP + A SL +S EL
Sbjct: 256 FLKEIGSVPLLNENQVISLAREIRKLALWNATRIQLRQQYGREPDRVEWAKSLNMSSEEL 315
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ ARE L +N+RLV+S+A+++ N G M DL+Q
Sbjct: 316 TRNLLRAQRARESLVAANLRLVVSVAKQFTNRGLSMQDLIQ 356
>I4HQ77_MICAE (tr|I4HQ77) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9809 GN=rpoD PE=4 SV=1
Length = 318
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + +++++ + L++ K L+ KLG EPSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLRAKLGREPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>I4FRP5_MICAE (tr|I4FRP5) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9717 GN=rpoD PE=4 SV=1
Length = 318
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + +++++ + L++ K L+ KLG EPSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLRAKLGREPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>A9RTR6_PHYPA (tr|A9RTR6) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_178031 PE=4 SV=1
Length = 583
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 62/103 (60%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + +LLS +E V LS KI+ L L++ ++ L+ +G EP+ + + ++ + ++
Sbjct: 272 RSYLRDIKRTKLLSASEEVALSRKIQDILKLEKIRAELQRDIGREPTLSEWSQAVSLDQT 331
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + E A+++L SN+RLV+SI + Y G + DL+Q
Sbjct: 332 SLELRVKEGRSAKDKLVNSNLRLVVSIVKNYQGRGMTLPDLIQ 374
>B0JTP4_MICAN (tr|B0JTP4) Group 2 RNA polymerase sigma factor OS=Microcystis
aeruginosa (strain NIES-843) GN=sigD PE=4 SV=1
Length = 318
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + +++++ + L++ K LK KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLKVKLGSDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>K9X9V9_9CHRO (tr|K9X9V9) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 7428
GN=Glo7428_0681 PE=3 SV=1
Length = 384
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ ++K + +E + RL+ ++ +P+ ++A L +S +
Sbjct: 76 AFFKEMARYPLLKPEEEVELARRVKFIVEFEEIQQRLQAEIKRQPNKAEVATLLGMSERQ 135
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 136 LEHRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGLPFLDLIQ 177
>I4GS23_MICAE (tr|I4GS23) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9806 GN=rpoD PE=4 SV=1
Length = 318
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LLSH E + +++++ + L++ K L+ KLG +PSD Q + + +IS
Sbjct: 12 RAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGRDPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>Q3B0L4_SYNS9 (tr|Q3B0L4) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9902) GN=Syncc9902_0139 PE=3 SV=1
Length = 332
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 64/103 (62%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H + + L +++ + ++ ++ L+ + G +P+ DQ+A + ++S
Sbjct: 26 RSYLRDIGRVPLLTHEQEITLGRQVQQLMEIETLEAELESRDGAKPARDQLAKAAELSTV 85
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+L+ K + A+ER+ +N+RLV+S+A++Y E+ DL+Q
Sbjct: 86 QLKRKLQQGHRAKERMVAANLRLVVSVAKKYTKRNMELLDLIQ 128
>Q062S3_9SYNE (tr|Q062S3) RNA polymerase sigma factor OS=Synechococcus sp. BL107
GN=BL107_06099 PE=3 SV=1
Length = 332
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 64/103 (62%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H + + L +++ + ++ ++ L+ + G +P+ DQ+A + ++S
Sbjct: 26 RSYLRDIGRVPLLTHEQEITLGRQVQQLMEIETLEAELESRDGAKPARDQLAKAAELSTV 85
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+L+ K + A+ER+ +N+RLV+S+A++Y E+ DL+Q
Sbjct: 86 QLKRKLQQGHRAKERMVAANLRLVVSVAKKYTKRNMELLDLIQ 128
>K9Q243_9CYAN (tr|K9Q243) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
7376 GN=Lepto7376_3199 PE=3 SV=1
Length = 373
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISR-S 254
+ K + LL E ++L+ +K +E + L E+LG PS ++ AA LKI+
Sbjct: 64 AFFKEMARYPLLKPDEEIQLAHSVKFLNDAEEKRLALTEELGRSPSKEEWAAVLKIATIR 123
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
EL ++ + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 124 ELNSQLYKGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 166
>K9RSJ7_SYNP3 (tr|K9RSJ7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27167 / PCC 6312) GN=Syn6312_1261 PE=3 SV=1
Length = 382
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSD-----DQIAASLKI 251
Y++ + +LL E ++L+ KI L L+ + R+ E+L C+P D + A+ +K+
Sbjct: 72 YLQEIGRIRLLRADEEIELARKIADLLELERIRDRISEQLDCDPDDLERHPEPWASEVKM 131
Query: 252 SRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ R + A+E++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 132 TLPAFRHRLFVGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 177
>D7KIT0_ARALL (tr|D7KIT0) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_470915 PE=4 SV=1
Length = 572
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 182 RSLISPELLQNRSKGYVKGVVSE-QLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEP 240
+ L++ E+ N Y++ S +LL+ E +LS I+ L L+ ++ L E+ G +P
Sbjct: 247 KRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGRQP 306
Query: 241 SDDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ Q A++ + + LR + TL ++++ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 307 TFAQWASAAGVDQKSLRKRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 363
>A0YTZ3_LYNSP (tr|A0YTZ3) RNA polymerase sigma factor OS=Lyngbya sp. (strain PCC
8106) GN=L8106_10432 PE=3 SV=1
Length = 391
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + +LL E ++L+ +I L L+ + +L E CEP D + A+++ ++ E
Sbjct: 86 YLQEIGRIRLLRADEEIELARRIADLLELERIREKLVEHNHCEPEDREWASAVDMALPEF 145
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R + A++++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 146 RRRLYLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 186
>K9ZBP9_ANACC (tr|K9ZBP9) RNA polymerase sigma factor OS=Anabaena cylindrica
(strain ATCC 27899 / PCC 7122) GN=Anacy_0437 PE=3 SV=1
Length = 377
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 62/102 (60%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+ +++ + + ++ L+ +LG +PS +++A+ +++ +
Sbjct: 69 AFFKEMARYPLLKADEEVELARRVRFLEEVKDLQAALELELGQQPSKNEVASKFEMTEKQ 128
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L ++ + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 129 LESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 170
>L8LWE0_9CYAN (tr|L8LWE0) RNA polymerase sigma factor, cyanobacterial RpoD-like
family OS=Xenococcus sp. PCC 7305
GN=Xen7305DRAFT_00016980 PE=4 SV=1
Length = 318
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 61/103 (59%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y+K + LL+H E + +++++ ++L + K L+EKLG EP+ Q A K+S
Sbjct: 12 RSYLKEIGRVDLLTHEEEIHYAKRVQREIALVKIKDSLQEKLGQEPTYSQWAKEAKLSVK 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
EL+ A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 ELKTTLEAGEAAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>K7KHD7_SOYBN (tr|K7KHD7) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 564
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 197 YVKGVVS-EQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
Y++ S +LL+ E +KLS I+ L L++ + L E+ G +P+ Q AA + +
Sbjct: 256 YLRTTTSASRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKT 315
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
LR + ++++ SN+RLV+SIA+ Y G + DLVQ
Sbjct: 316 LRKRLNYGIFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQ 357
>I4IAS0_9CHRO (tr|I4IAS0) RNA polymerase sigma factor rpoD3 OS=Microcystis sp.
T1-4 GN=rpoD PE=4 SV=1
Length = 318
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 63/103 (61%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + +++++ + L++ K L+ +LG EPSD Q + + +IS
Sbjct: 12 RSYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLRSQLGREPSDRQWSEAAEISEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ ++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 QLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>J7G2H9_9CRYP (tr|J7G2H9) RNA-polymerase sigma factor OS=Chroomonas
mesostigmatica CCMP1168 GN=rpoD PE=4 SV=1
Length = 485
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISR- 253
+ Y++ + +LL E ++L+ +I L + K L+EKL EP+ + A+ K+S
Sbjct: 136 RWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDV 195
Query: 254 SELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ RA A+ER+ +N+RLV+SIA+RY N G + DL+Q
Sbjct: 196 KKFRAILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQ 239
>M1BY23_SOLTU (tr|M1BY23) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 385
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 61/101 (60%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
++ G ++QLL+ E +L KI++ + L E K +L+ + EP+ + A + I+ EL
Sbjct: 106 FLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSREL 165
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+++ + +RE+L +N+R+V+ IA++Y G + DL+Q
Sbjct: 166 KSQLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQ 206
>Q39515_CYACA (tr|Q39515) Chloroplast RNA polymerase sigma subunit OS=Cyanidium
caldarium GN=sigA PE=4 SV=1
Length = 591
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + QLL E ++LS+++ + + L++ + +E+ G P++ + A
Sbjct: 279 RSYLREIGRYQLLHPGEEIELSKQVCILMDLEQFQRSFREEHGKSPTESEWAQGCGYGDD 338
Query: 255 --ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+LR + A+ER+ +N+RLV+SIA+RY N G + DL+Q
Sbjct: 339 VEKLREHIRDGRKAKERMVTANLRLVVSIAKRYSNRGVALQDLIQ 383
>K9QU00_NOSS7 (tr|K9QU00) RNA polymerase sigma factor OS=Nostoc sp. (strain ATCC
29411 / PCC 7524) GN=Nos7524_2430 PE=3 SV=1
Length = 388
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%)
Query: 196 GYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSE 255
+ K + LL E V+L+++++ + + + L+ +LG +P+ QIA +I+ +
Sbjct: 80 AFFKEMARYPLLKPDEEVELAKRVRFLEDVKDLQEALELELGQQPTKAQIADKFEITEKQ 139
Query: 256 LRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
L + + +A+ ++ SN+RLV+SIA+RY N G DL+Q
Sbjct: 140 LENRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQ 181
>L8LPU5_9CHRO (tr|L8LPU5) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 73106
GN=GLO73106DRAFT_00034750 PE=3 SV=1
Length = 376
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + +LL E ++L+ KI L L++ + +L ++L P+D + AAS+++
Sbjct: 71 YLQEIGRIRLLRAEEEIELARKIADLLELEQKREKLWQELKRIPNDREWAASVEMELPAF 130
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R + A+E++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 131 RRRLYLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 171
>K9XHA2_9CHRO (tr|K9XHA2) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 7428
GN=Glo7428_2515 PE=3 SV=1
Length = 390
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + +LL E ++L+ KI L ++ + RL E+L EP D + A ++++S
Sbjct: 85 YLQEIGRIRLLRADEEIELARKIAELLEMERVRERLLEQLDREPQDSEWAEAVQLSLPTF 144
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R + A++++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 145 RYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 185
>B7KAB6_CYAP7 (tr|B7KAB6) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Cyanothece sp. (strain PCC 7424) GN=PCC7424_4527 PE=4
SV=1
Length = 318
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 61/103 (59%)
Query: 195 KGYVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRS 254
+ Y++ + LL+H E + L+++++ ++L + K L + L EP D + A++ KI+
Sbjct: 12 RAYLREIGRVPLLTHEEEIVLAKRVQRFMALQDIKDALTQTLKREPQDSEWASAAKITEE 71
Query: 255 ELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
EL A+E++ +N+RLV+S+A++Y ++ DL+Q
Sbjct: 72 ELHRAIAAGKAAKEKMVEANLRLVVSVAKKYLKRNLDLLDLIQ 114
>K9X1I3_9NOST (tr|K9X1I3) RNA polymerase sigma factor OS=Cylindrospermum stagnale
PCC 7417 GN=Cylst_3438 PE=3 SV=1
Length = 390
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + +LL E ++L+ KI L L+ + RL E+L +P D + AA +++
Sbjct: 85 YLQEIGRIRLLRADEEIELARKIADLLELERVRERLSERLERDPKDSEWAAEVQLPLPAF 144
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R + A++++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 145 RYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 185
>K9YRT3_DACSA (tr|K9YRT3) RNA polymerase sigma factor OS=Dactylococcopsis salina
PCC 8305 GN=Dacsa_0937 PE=3 SV=1
Length = 388
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%)
Query: 197 YVKGVVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSEL 256
Y++ + +LL E ++L+ KI L+ ++ L+ +GCEP+D++ A + + +
Sbjct: 82 YLQEIGRIRLLRADEEIELARKIADLSELERTRTELEATIGCEPTDEEWAEEVGQALPKF 141
Query: 257 RAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
R + + A+E++ SN+RLV+SIA++Y N G DL+Q
Sbjct: 142 RRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 182
>J3N844_ORYBR (tr|J3N844) Uncharacterized protein OS=Oryza brachyantha
GN=OB11G19800 PE=4 SV=1
Length = 562
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 201 VVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPSDDQIAASLKISRSELRAKT 260
+ +LL+ E V+ SE I+ L L+ ++ L E G +P+ Q A + I LR +
Sbjct: 256 MTGRRLLTAKEEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFSQWATAAGIDERTLRKRL 315
Query: 261 IECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
+ R+ SNVRLV+SIA+ ++ G E+ DL+Q
Sbjct: 316 DHGIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQ 352
>I1QZW7_ORYGL (tr|I1QZW7) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 564
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 191 QNRSKGYVKG---------VVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPS 241
+ RSKG G + +LL+ E V+ SE I+ L L+ ++ L E G +P+
Sbjct: 239 KKRSKGASSGTNPLGSLWKMTGRRLLTAKEEVEFSEGIQDLLKLEAIQAELAEYNGGQPT 298
Query: 242 DDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
Q A + + LR + + R+ SNVRLV+SIA+ ++ G E+ DL+Q
Sbjct: 299 FAQWATAAGVDERTLRKRLDHGIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQ 354
>Q53KH8_ORYSJ (tr|Q53KH8) Os11g0448400 protein OS=Oryza sativa subsp. japonica
GN=Os11g0448400 PE=4 SV=1
Length = 564
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 191 QNRSKGYVKG---------VVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPS 241
+ RSKG G + +LL+ E V+ SE I+ L L+ ++ L E G +P+
Sbjct: 239 KKRSKGASSGTNPLGSLWKMTGRRLLTAKEEVEFSEGIQDLLKLEAIQAELAEYNGGQPT 298
Query: 242 DDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
Q A + + LR + + R+ SNVRLV+SIA+ ++ G E+ DL+Q
Sbjct: 299 FAQWATAAGVDERTLRKRLDHGIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQ 354
>B8AUZ3_ORYSI (tr|B8AUZ3) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_14770 PE=2 SV=1
Length = 563
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 191 QNRSKGYVKG---------VVSEQLLSHAEVVKLSEKIKVGLSLDEHKSRLKEKLGCEPS 241
+ RSKG G + +LL+ E V+ SE I+ L L+ ++ L E G +P+
Sbjct: 238 KKRSKGASSGTNPLGSLWKMTGRRLLTAKEEVEFSEGIQDLLKLEAIQAELAEYNGGQPT 297
Query: 242 DDQIAASLKISRSELRAKTIECTLARERLAMSNVRLVMSIAQRYDNMGAEMADLVQ 297
Q A + + LR + + R+ SNVRLV+SIA+ ++ G E+ DL+Q
Sbjct: 298 FAQWATAAGVDERTLRKRLDHGIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQ 353