Miyakogusa Predicted Gene

Lj3g3v3638930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3638930.1 tr|B9H1A1|B9H1A1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_648793 PE=4
SV=1,45.57,0.0000002,seg,NULL,CUFF.46042.1
         (73 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6T5E2_SOYBN (tr|C6T5E2) Putative uncharacterized protein OS=Gly...    59   6e-07
I1LKF3_SOYBN (tr|I1LKF3) Uncharacterized protein OS=Glycine max ...    59   6e-07

>C6T5E2_SOYBN (tr|C6T5E2) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 199

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 41/55 (74%), Gaps = 6/55 (10%)

Query: 1  MDDGNTELSDKLSDN-VLFSNLESSSNFHASTSVNTVTELSCTHTHTCNPPGSDS 54
          MDDGN ELSDKLSDN VLF N ES S+F AS+S  T     CTHTHTCNPPG D+
Sbjct: 1  MDDGNAELSDKLSDNNVLFLNPESCSSFQASSSSRT-----CTHTHTCNPPGPDA 50


>I1LKF3_SOYBN (tr|I1LKF3) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 240

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 41/55 (74%), Gaps = 6/55 (10%)

Query: 1  MDDGNTELSDKLSDN-VLFSNLESSSNFHASTSVNTVTELSCTHTHTCNPPGSDS 54
          MDDGN ELSDKLSDN VLF N ES S+F AS+S  T     CTHTHTCNPPG D+
Sbjct: 1  MDDGNAELSDKLSDNNVLFLNPESCSSFQASSSSRT-----CTHTHTCNPPGPDA 50