Miyakogusa Predicted Gene

Lj3g3v3312780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3312780.1 Non Chatacterized Hit- tr|B9T798|B9T798_RICCO
Endonuclease III, putative OS=Ricinus communis
GN=RCOM,41.3,0.4,seg,NULL,CUFF.45546.1
         (109 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7LPH0_SOYBN (tr|K7LPH0) Uncharacterized protein OS=Glycine max ...    59   6e-07

>K7LPH0_SOYBN (tr|K7LPH0) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 357

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 19/89 (21%)

Query: 20  IMSETPRRSYKASLSNTNTPTSLVEGXXXXXXXXXXXQLRVFVRKNKRPRKMTMELQQKE 79
           +MSET R   KA+ S +NT TS++E            Q+RVF+R+NKRPR M ++L+Q +
Sbjct: 3   MMSETTRSFCKAT-SPSNT-TSIIEATHS--------QVRVFMRRNKRPRNMALKLEQSD 52

Query: 80  PPPPTQDHK-----KLGPPEIEDFAYSGA 103
                QD K     K G PEIE+FAY GA
Sbjct: 53  H----QDLKVPVTHKFGLPEIEEFAYCGA 77