Miyakogusa Predicted Gene

Lj3g3v3242120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3242120.1 Non Chatacterized Hit- tr|C6TF86|C6TF86_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,60.34,0.0005,
,CUFF.45510.1
         (66 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SW60_LOTJA (tr|I3SW60) Uncharacterized protein OS=Lotus japoni...    79   6e-13

>I3SW60_LOTJA (tr|I3SW60) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 66

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 42/66 (63%)

Query: 1  MAHISNTRAXXXXXXXXXXXXXATEVKGQSEAPAPSPDVGAGAMVTYSGAFVFXXXXXXX 60
          MAHISNTRA             ATEVKGQSEAPAPSPDVGAGAMVTYSGAFVF       
Sbjct: 1  MAHISNTRAVFFFMVLVVGLLFATEVKGQSEAPAPSPDVGAGAMVTYSGAFVFSSLLLSL 60

Query: 61 XXXXRH 66
              RH
Sbjct: 61 LGLLRH 66