Miyakogusa Predicted Gene

Lj3g3v3085650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3085650.1 Non Chatacterized Hit- tr|C6TJ54|C6TJ54_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7398
PE=,53.33,0.00000000000004,seg,NULL,CUFF.45261.1
         (182 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6TJ54_SOYBN (tr|C6TJ54) Uncharacterized protein OS=Glycine max ...    64   2e-08
G7IRT5_MEDTR (tr|G7IRT5) Ribonuclease OS=Medicago truncatula GN=...    56   6e-06

>C6TJ54_SOYBN (tr|C6TJ54) Uncharacterized protein OS=Glycine max PE=2 SV=1
          Length = 401

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 53  KQTEFPSSRSSTLCSHTTMRLPCQGISPPVTIWTAVPVFSPPP-ATMFHHQEMXXXXXXX 111
           ++ +FP++ ++       MR PCQG++PPVTI TA+PVFSPPP A    HQ +       
Sbjct: 269 RRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRTAIPVFSPPPAAAAVSHQVLRAPHVRV 327

Query: 112 XXXXSTRQAVPVYTA--PPIRRYVPAPICK 139
               + RQAVPV+    PPIR+  P PI K
Sbjct: 328 APPVTIRQAVPVFATPPPPIRKDEPVPIPK 357


>G7IRT5_MEDTR (tr|G7IRT5) Ribonuclease OS=Medicago truncatula GN=MTR_2g094490
           PE=4 SV=1
          Length = 408

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 7/87 (8%)

Query: 57  FPSSRSSTLCSHTTMRLPCQGISPPVTIWTAVPVFS----PPPATMFHHQEMXXXXXXXX 112
           FP++ +        MR PC GI+P V++ T +PVFS    PPP ++  HQ +        
Sbjct: 282 FPAAGAPPYVPIRQMR-PCHGIAPAVSVRTVIPVFSAPPLPPPTSV--HQIIRAPPVRIA 338

Query: 113 XXXSTRQAVPVYTAPPIRRYVPAPICK 139
              S RQAVPV+ APP+R+  PAPI K
Sbjct: 339 PPVSIRQAVPVFAAPPLRKDEPAPIQK 365