Miyakogusa Predicted Gene

Lj3g3v2838590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2838590.1 Non Chatacterized Hit- tr|I3T190|I3T190_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,51.49,2e-17,seg,NULL,CUFF.44768.1
         (323 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T190_LOTJA (tr|I3T190) Uncharacterized protein OS=Lotus japoni...    61   5e-07

>I3T190_LOTJA (tr|I3T190) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 141

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 5/71 (7%)

Query: 13 NRLDRLISLKEMLVEVDEMLAELSNSRLTFLQEIINSFLVPRPLINDEGPLRKKRDELNE 72
          N L+RL+ LK+MLV+ DE+ A L+NSRLT LQEIIN+F      ++DEGPL  K +ELN+
Sbjct: 15 NHLNRLMRLKDMLVKEDELSAVLTNSRLTSLQEIINNF----SQVDDEGPL-NKWNELNQ 69

Query: 73 RLMRLRVSETR 83
          RL  L   E +
Sbjct: 70 RLAWLHSMEAQ 80



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 218 LCERLKTINSHLRLKEMLVKEDKXXXXXXXXXXXXXQEIINNFSDI-DEGPPXXXXXXXX 276
           LC+RL  +N  +RLK+MLVKED+             QEIINNFS + DEGP         
Sbjct: 10  LCQRLNHLNRLMRLKDMLVKEDELSAVLTNSRLTSLQEIINNFSQVDDEGP-----LNKW 64

Query: 277 XXXXKGLVRLREMEVEDAELIAVRTNGEL 305
               + L  L  ME +D+ L+A+R+N EL
Sbjct: 65  NELNQRLAWLHSMEAQDSHLLAMRSNSEL 93