Miyakogusa Predicted Gene

Lj3g3v2769330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2769330.1 CUFF.44596.1
         (102 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T8P5_LOTJA (tr|I3T8P5) Uncharacterized protein OS=Lotus japoni...   207   8e-52
I3S8J6_LOTJA (tr|I3S8J6) Uncharacterized protein OS=Lotus japoni...    62   7e-08

>I3T8P5_LOTJA (tr|I3T8P5) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 102

 Score =  207 bits (528), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   MDSSSKCWSCGGLERPRLVQVEQCHKISSTSCQKPFEIIASGKEAFLLILLFCYGFQQII 60
           MDSSSKCWSCGGLERPRLVQVEQCHKISSTSCQKPFEIIASGKEAFLLILLFCYGFQQII
Sbjct: 1   MDSSSKCWSCGGLERPRLVQVEQCHKISSTSCQKPFEIIASGKEAFLLILLFCYGFQQII 60

Query: 61  KGRRSKKVRGILENSHVLELLGSQQLTRARVTRAITKDCVSD 102
           KGRRSKKVRGILENSHVLELLGSQQLTRARVTRAITKDCVSD
Sbjct: 61  KGRRSKKVRGILENSHVLELLGSQQLTRARVTRAITKDCVSD 102


>I3S8J6_LOTJA (tr|I3S8J6) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 105

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 2/43 (4%)

Query: 56  FQQIIKGRRSKKVRGILENSHVLELLGSQQLTRARVTRAITKD 98
           FQQIIK R SK+VRGI+E+SHVLELLGSQQL  AR T AITKD
Sbjct: 65  FQQIIKRRGSKEVRGIIEDSHVLELLGSQQL--ARDTGAITKD 105