Miyakogusa Predicted Gene

Lj3g3v1954570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1954570.1 Non Chatacterized Hit- tr|I3T2A2|I3T2A2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,82.81,0.000000000001,seg,NULL,CUFF.43370.1
         (88 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T2A2_LOTJA (tr|I3T2A2) Uncharacterized protein OS=Lotus japoni...    75   1e-11

>I3T2A2_LOTJA (tr|I3T2A2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 244

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 43/64 (67%), Gaps = 4/64 (6%)

Query: 14 LIHNDDDEPVVSDATNLALIRPDHFSIDSTPXXXXXXXXXXXXDEVDRN----LTSSSLI 69
          LIHNDDDEPVVSDATNLALIRPDHFSIDSTP            DEVDRN      ++ L 
Sbjct: 14 LIHNDDDEPVVSDATNLALIRPDHFSIDSTPNSNSSCNSNSSSDEVDRNFDDSFVANQLF 73

Query: 70 PIPN 73
          P PN
Sbjct: 74 PNPN 77