Miyakogusa Predicted Gene
- Lj3g3v1906470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1906470.1 tr|I1M0N3|I1M0N3_SOYBN DNA-directed RNA
polymerase OS=Glycine max GN=Gma.25522 PE=3
SV=1,86.2,0,RNA_pol_Rpb2_6,DNA-directed RNA polymerase, subunit 2,
domain 6; RNA_pol_Rpb2_3,RNA polymerase Rpb2,,CUFF.43307.1
(994 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1M0N3_SOYBN (tr|I1M0N3) DNA-directed RNA polymerase (Fragment) ... 1783 0.0
K7MME1_SOYBN (tr|K7MME1) DNA-directed RNA polymerase OS=Glycine ... 1752 0.0
F6HVC4_VITVI (tr|F6HVC4) DNA-directed RNA polymerase OS=Vitis vi... 1609 0.0
B9SVH7_RICCO (tr|B9SVH7) DNA-directed RNA polymerase OS=Ricinus ... 1609 0.0
M5XL01_PRUPE (tr|M5XL01) Uncharacterized protein OS=Prunus persi... 1498 0.0
K4AY64_SOLLC (tr|K4AY64) DNA-directed RNA polymerase OS=Solanum ... 1485 0.0
B9GLY1_POPTR (tr|B9GLY1) DNA-directed RNA polymerase (Fragment) ... 1475 0.0
D7KEN3_ARALL (tr|D7KEN3) DNA-directed RNA polymerase OS=Arabidop... 1468 0.0
F4I366_ARATH (tr|F4I366) DNA-directed RNA polymerase OS=Arabidop... 1459 0.0
R0ILS1_9BRAS (tr|R0ILS1) Uncharacterized protein OS=Capsella rub... 1454 0.0
Q9FXG4_ARATH (tr|Q9FXG4) DNA-directed RNA polymerase OS=Arabidop... 1424 0.0
Q9C8S4_ARATH (tr|Q9C8S4) DNA-directed RNA polymerase OS=Arabidop... 1420 0.0
M0TSV1_MUSAM (tr|M0TSV1) DNA-directed RNA polymerase OS=Musa acu... 1418 0.0
M4EN13_BRARP (tr|M4EN13) DNA-directed RNA polymerase OS=Brassica... 1416 0.0
J3N3Q7_ORYBR (tr|J3N3Q7) DNA-directed RNA polymerase OS=Oryza br... 1338 0.0
B8BHP0_ORYSI (tr|B8BHP0) DNA-directed RNA polymerase OS=Oryza sa... 1333 0.0
B9G6G0_ORYSJ (tr|B9G6G0) DNA-directed RNA polymerase OS=Oryza sa... 1320 0.0
Q337H6_ORYSJ (tr|Q337H6) DNA-directed RNA polymerase OS=Oryza sa... 1318 0.0
I1I530_BRADI (tr|I1I530) DNA-directed RNA polymerase OS=Brachypo... 1261 0.0
N1R3Z7_AEGTA (tr|N1R3Z7) DNA-directed RNA polymerase I subunit R... 1182 0.0
M7ZRZ1_TRIUA (tr|M7ZRZ1) Putative DNA-directed RNA polymerase I ... 1172 0.0
A9T5Q2_PHYPA (tr|A9T5Q2) DNA-directed RNA polymerase OS=Physcomi... 1116 0.0
D8TFV8_SELML (tr|D8TFV8) DNA-directed RNA polymerase OS=Selagine... 1107 0.0
Q8LNU6_ORYSJ (tr|Q8LNU6) DNA-directed RNA polymerase (Fragment) ... 1101 0.0
F2EHB5_HORVD (tr|F2EHB5) DNA-directed RNA polymerase OS=Hordeum ... 1056 0.0
G7JR14_MEDTR (tr|G7JR14) DNA-directed RNA polymerase OS=Medicago... 1028 0.0
M0UYE0_HORVD (tr|M0UYE0) DNA-directed RNA polymerase OS=Hordeum ... 901 0.0
Q0WLL1_ARATH (tr|Q0WLL1) DNA-directed RNA polymerase (Fragment) ... 892 0.0
I1C4E5_RHIO9 (tr|I1C4E5) DNA-directed RNA polymerase OS=Rhizopus... 875 0.0
I1CPV4_RHIO9 (tr|I1CPV4) DNA-directed RNA polymerase OS=Rhizopus... 874 0.0
F4P3R2_BATDJ (tr|F4P3R2) DNA-directed RNA polymerase OS=Batracho... 843 0.0
C1MLF5_MICPC (tr|C1MLF5) DNA-directed RNA polymerase OS=Micromon... 838 0.0
D8RUX1_SELML (tr|D8RUX1) DNA-directed RNA polymerase (Fragment) ... 838 0.0
K5XAJ1_PHACS (tr|K5XAJ1) DNA-directed RNA polymerase OS=Phaneroc... 836 0.0
C1FDM4_MICSR (tr|C1FDM4) DNA-directed RNA polymerase OS=Micromon... 834 0.0
R7T1L0_DICSQ (tr|R7T1L0) Beta and beta-prime subunits of DNA dep... 833 0.0
J3PQ51_PUCT1 (tr|J3PQ51) DNA-directed RNA polymerase OS=Puccinia... 830 0.0
G4YQU6_PHYSP (tr|G4YQU6) DNA-directed RNA polymerase OS=Phytopht... 828 0.0
B6K4L6_SCHJY (tr|B6K4L6) DNA-directed RNA polymerase OS=Schizosa... 828 0.0
E3KL26_PUCGT (tr|E3KL26) DNA-directed RNA polymerase OS=Puccinia... 826 0.0
H3G5P5_PHYRM (tr|H3G5P5) DNA-directed RNA polymerase (Fragment) ... 823 0.0
M2RPJ9_CERSU (tr|M2RPJ9) DNA-directed RNA polymerase OS=Ceripori... 818 0.0
F0WZ84_9STRA (tr|F0WZ84) DNA-directed RNA polymerase OS=Albugo l... 816 0.0
J5SQ16_TRIAS (tr|J5SQ16) DNA-directed RNA polymerase OS=Trichosp... 816 0.0
D0MW98_PHYIT (tr|D0MW98) DNA-directed RNA polymerase OS=Phytopht... 816 0.0
K9HZK2_AGABB (tr|K9HZK2) DNA-directed RNA polymerase OS=Agaricus... 814 0.0
K5WWS6_AGABU (tr|K5WWS6) DNA-directed RNA polymerase OS=Agaricus... 813 0.0
B0CXK3_LACBS (tr|B0CXK3) DNA-directed RNA polymerase OS=Laccaria... 811 0.0
K3WI27_PYTUL (tr|K3WI27) DNA-directed RNA polymerase OS=Pythium ... 809 0.0
M4B3C6_HYAAE (tr|M4B3C6) DNA-directed RNA polymerase OS=Hyaloper... 806 0.0
Q5KEV8_CRYNJ (tr|Q5KEV8) DNA-directed RNA polymerase OS=Cryptoco... 805 0.0
F5HHB3_CRYNB (tr|F5HHB3) DNA-directed RNA polymerase OS=Cryptoco... 805 0.0
E6ZTI0_SPORE (tr|E6ZTI0) DNA-directed RNA polymerase OS=Sporisor... 805 0.0
M9MBL9_9BASI (tr|M9MBL9) RNA polymerase I, second largest subuni... 805 0.0
Q4PFI0_USTMA (tr|Q4PFI0) DNA-directed RNA polymerase OS=Ustilago... 804 0.0
E7RA98_PICAD (tr|E7RA98) DNA-directed RNA polymerase OS=Pichia a... 803 0.0
E6R7Q5_CRYGW (tr|E6R7Q5) DNA-directed RNA polymerase OS=Cryptoco... 802 0.0
R9P797_9BASI (tr|R9P797) Uncharacterized protein OS=Pseudozyma h... 802 0.0
J9VN76_CRYNH (tr|J9VN76) DNA-directed RNA polymerase OS=Cryptoco... 802 0.0
L5LWG5_MYODS (tr|L5LWG5) DNA-directed RNA polymerase OS=Myotis d... 801 0.0
G1P3I0_MYOLU (tr|G1P3I0) DNA-directed RNA polymerase (Fragment) ... 801 0.0
I2G6C2_USTH4 (tr|I2G6C2) DNA-directed RNA polymerase OS=Ustilago... 800 0.0
A1CTA9_ASPCL (tr|A1CTA9) DNA-directed RNA polymerase OS=Aspergil... 800 0.0
D8LXL2_BLAHO (tr|D8LXL2) DNA-directed RNA polymerase OS=Blastocy... 800 0.0
Q4WMY3_ASPFU (tr|Q4WMY3) DNA-directed RNA polymerase OS=Neosarto... 799 0.0
H3CAK8_TETNG (tr|H3CAK8) DNA-directed RNA polymerase (Fragment) ... 798 0.0
F8PR90_SERL3 (tr|F8PR90) DNA-directed RNA polymerase OS=Serpula ... 798 0.0
F8NP09_SERL9 (tr|F8NP09) DNA-directed RNA polymerase OS=Serpula ... 798 0.0
A1DMM7_NEOFI (tr|A1DMM7) DNA-directed RNA polymerase OS=Neosarto... 798 0.0
Q6C6G0_YARLI (tr|Q6C6G0) DNA-directed RNA polymerase OS=Yarrowia... 797 0.0
B0Y7L8_ASPFC (tr|B0Y7L8) DNA-directed RNA polymerase OS=Neosarto... 797 0.0
H2SUR9_TAKRU (tr|H2SUR9) DNA-directed RNA polymerase OS=Takifugu... 797 0.0
K1WS88_TRIAC (tr|K1WS88) DNA-directed RNA polymerase OS=Trichosp... 797 0.0
C5MG45_CANTT (tr|C5MG45) DNA-directed RNA polymerase OS=Candida ... 794 0.0
G1QM83_NOMLE (tr|G1QM83) DNA-directed RNA polymerase (Fragment) ... 793 0.0
F4RYP7_MELLP (tr|F4RYP7) DNA-directed RNA polymerase OS=Melampso... 793 0.0
Q6BKD3_DEBHA (tr|Q6BKD3) DNA-directed RNA polymerase OS=Debaryom... 793 0.0
H2R8N5_PANTR (tr|H2R8N5) DNA-directed RNA polymerase OS=Pan trog... 793 0.0
A2QVK7_ASPNC (tr|A2QVK7) DNA-directed RNA polymerase OS=Aspergil... 793 0.0
G7E0U6_MIXOS (tr|G7E0U6) DNA-directed RNA polymerase OS=Mixia os... 793 0.0
I3JW02_ORENI (tr|I3JW02) DNA-directed RNA polymerase OS=Oreochro... 792 0.0
G8B918_CANPC (tr|G8B918) DNA-directed RNA polymerase OS=Candida ... 792 0.0
M5GH01_DACSP (tr|M5GH01) DNA-directed RNA polymerase I polypepti... 792 0.0
A6QLS0_BOVIN (tr|A6QLS0) DNA-directed RNA polymerase OS=Bos taur... 791 0.0
G1SQ88_RABIT (tr|G1SQ88) DNA-directed RNA polymerase OS=Oryctola... 791 0.0
K9INS3_DESRO (tr|K9INS3) DNA-directed RNA polymerase OS=Desmodus... 791 0.0
L8GRD1_ACACA (tr|L8GRD1) DNA-directed RNA polymerase OS=Acantham... 791 0.0
K7DPC4_PANTR (tr|K7DPC4) DNA-directed RNA polymerase OS=Pan trog... 791 0.0
B7Z1W6_HUMAN (tr|B7Z1W6) DNA-directed RNA polymerase OS=Homo sap... 791 0.0
G7XAW2_ASPKW (tr|G7XAW2) DNA-directed RNA polymerase OS=Aspergil... 791 0.0
F5GZX4_HUMAN (tr|F5GZX4) DNA-directed RNA polymerase OS=Homo sap... 791 0.0
H8XAX6_CANO9 (tr|H8XAX6) DNA-directed RNA polymerase OS=Candida ... 790 0.0
L0P9P7_PNEJ8 (tr|L0P9P7) DNA-directed RNA polymerase OS=Pneumocy... 790 0.0
H0VU26_CAVPO (tr|H0VU26) DNA-directed RNA polymerase OS=Cavia po... 790 0.0
Q5B697_EMENI (tr|Q5B697) DNA-directed RNA polymerase OS=Emericel... 790 0.0
L8IVA2_BOSMU (tr|L8IVA2) DNA-directed RNA polymerase OS=Bos grun... 790 0.0
D2HUR1_AILME (tr|D2HUR1) DNA-directed RNA polymerase (Fragment) ... 790 0.0
E9CI32_CAPO3 (tr|E9CI32) DNA-directed RNA polymerase OS=Capsaspo... 790 0.0
I2JVC9_DEKBR (tr|I2JVC9) DNA-directed RNA polymerase OS=Dekkera ... 790 0.0
F6Y6Q9_CALJA (tr|F6Y6Q9) DNA-directed RNA polymerase OS=Callithr... 790 0.0
B9WJL4_CANDC (tr|B9WJL4) DNA-directed RNA polymerase OS=Candida ... 789 0.0
G3NF51_GASAC (tr|G3NF51) DNA-directed RNA polymerase OS=Gasteros... 789 0.0
M5EP99_MALSM (tr|M5EP99) Genomic scaffold, msy_sf_10 OS=Malassez... 789 0.0
Q5AFK6_CANAL (tr|Q5AFK6) DNA-directed RNA polymerase OS=Candida ... 789 0.0
G1UA20_CANAX (tr|G1UA20) DNA-directed RNA polymerase OS=Candida ... 789 0.0
G3AV19_SPAPN (tr|G3AV19) DNA-directed RNA polymerase OS=Spathasp... 789 0.0
M7NQS3_9ASCO (tr|M7NQS3) Uncharacterized protein OS=Pneumocystis... 789 0.0
A3LWA8_PICST (tr|A3LWA8) DNA-directed RNA polymerase OS=Scheffer... 789 0.0
G3YC52_ASPNA (tr|G3YC52) DNA-directed RNA polymerase OS=Aspergil... 789 0.0
C4YTC6_CANAW (tr|C4YTC6) DNA-directed RNA polymerase OS=Candida ... 788 0.0
F7A8N0_MACMU (tr|F7A8N0) DNA-directed RNA polymerase OS=Macaca m... 788 0.0
H2P5F5_PONAB (tr|H2P5F5) DNA-directed RNA polymerase OS=Pongo ab... 788 0.0
B7Z823_HUMAN (tr|B7Z823) DNA-directed RNA polymerase OS=Homo sap... 788 0.0
G7PMZ1_MACFA (tr|G7PMZ1) DNA-directed RNA polymerase OS=Macaca f... 788 0.0
F7A8N8_MACMU (tr|F7A8N8) DNA-directed RNA polymerase OS=Macaca m... 788 0.0
R4XFN0_9ASCO (tr|R4XFN0) Uncharacterized protein OS=Taphrina def... 787 0.0
D8PQK3_SCHCM (tr|D8PQK3) DNA-directed RNA polymerase OS=Schizoph... 787 0.0
G1XG79_ARTOA (tr|G1XG79) DNA-directed RNA polymerase OS=Arthrobo... 786 0.0
E2REX8_CANFA (tr|E2REX8) DNA-directed RNA polymerase OS=Canis fa... 786 0.0
C0NSE6_AJECG (tr|C0NSE6) DNA-directed RNA polymerase OS=Ajellomy... 786 0.0
L9JM71_TUPCH (tr|L9JM71) DNA-directed RNA polymerase OS=Tupaia c... 786 0.0
Q4V967_DANRE (tr|Q4V967) DNA-directed RNA polymerase OS=Danio re... 786 0.0
H0WW57_OTOGA (tr|H0WW57) DNA-directed RNA polymerase (Fragment) ... 786 0.0
F7B818_MONDO (tr|F7B818) DNA-directed RNA polymerase OS=Monodelp... 786 0.0
A5DAV4_PICGU (tr|A5DAV4) DNA-directed RNA polymerase OS=Meyerozy... 786 0.0
C6HDP1_AJECH (tr|C6HDP1) DNA-directed RNA polymerase OS=Ajellomy... 786 0.0
F2QPB2_PICP7 (tr|F2QPB2) DNA-directed RNA polymerase OS=Komagata... 786 0.0
C4QY42_PICPG (tr|C4QY42) DNA-directed RNA polymerase OS=Komagata... 786 0.0
Q6P9Q2_MOUSE (tr|Q6P9Q2) DNA-directed RNA polymerase OS=Mus musc... 786 0.0
G3RCD9_GORGO (tr|G3RCD9) DNA-directed RNA polymerase OS=Gorilla ... 786 0.0
M3D561_9PEZI (tr|M3D561) DNA-directed RNA polymerase OS=Mycospha... 786 0.0
F0UUG6_AJEC8 (tr|F0UUG6) DNA-directed RNA polymerase OS=Ajellomy... 786 0.0
M3W8Y9_FELCA (tr|M3W8Y9) DNA-directed RNA polymerase OS=Felis ca... 786 0.0
M7X373_RHOTO (tr|M7X373) DNA-directed RNA polymerase I subunit R... 785 0.0
G8Y0M0_PICSO (tr|G8Y0M0) DNA-directed RNA polymerase OS=Pichia s... 785 0.0
G3B1A4_CANTC (tr|G3B1A4) DNA-directed RNA polymerase OS=Candida ... 784 0.0
H3AM97_LATCH (tr|H3AM97) DNA-directed RNA polymerase OS=Latimeri... 784 0.0
K0KHS6_WICCF (tr|K0KHS6) DNA-directed RNA polymerase OS=Wickerha... 784 0.0
F6PH26_HORSE (tr|F6PH26) DNA-directed RNA polymerase OS=Equus ca... 784 0.0
M3HJ00_CANMA (tr|M3HJ00) DNA-directed RNA polymerase OS=Candida ... 784 0.0
G8Y3K7_PICSO (tr|G8Y3K7) DNA-directed RNA polymerase OS=Pichia s... 784 0.0
G3GZZ7_CRIGR (tr|G3GZZ7) DNA-directed RNA polymerase OS=Cricetul... 783 0.0
B8JKD7_DANRE (tr|B8JKD7) Uncharacterized protein OS=Danio rerio ... 783 0.0
A2VCY0_DANRE (tr|A2VCY0) DNA-directed RNA polymerase OS=Danio re... 783 0.0
I3MB58_SPETR (tr|I3MB58) DNA-directed RNA polymerase (Fragment) ... 783 0.0
Q2UM88_ASPOR (tr|Q2UM88) DNA-directed RNA polymerase OS=Aspergil... 783 0.0
B8N4K6_ASPFN (tr|B8N4K6) DNA-directed RNA polymerase OS=Aspergil... 783 0.0
C5PH78_COCP7 (tr|C5PH78) DNA-directed RNA polymerase OS=Coccidio... 782 0.0
A8NYQ6_COPC7 (tr|A8NYQ6) DNA-directed RNA polymerase OS=Coprinop... 781 0.0
J3KIN9_COCIM (tr|J3KIN9) DNA-directed RNA polymerase OS=Coccidio... 781 0.0
F9XDD3_MYCGM (tr|F9XDD3) DNA-directed RNA polymerase OS=Mycospha... 781 0.0
F5H643_HUMAN (tr|F5H643) DNA-directed RNA polymerase OS=Homo sap... 781 0.0
E9CXA8_COCPS (tr|E9CXA8) DNA-directed RNA polymerase OS=Coccidio... 781 0.0
F1SUA2_PIG (tr|F1SUA2) DNA-directed RNA polymerase (Fragment) OS... 781 0.0
Q5RB08_PONAB (tr|Q5RB08) DNA-directed RNA polymerase OS=Pongo ab... 780 0.0
I8TFR4_ASPO3 (tr|I8TFR4) DNA-directed RNA polymerase OS=Aspergil... 780 0.0
R9AAU1_WALIC (tr|R9AAU1) Putative DNA-directed RNA polymerase I ... 780 0.0
G5B002_HETGA (tr|G5B002) DNA-directed RNA polymerase OS=Heteroce... 780 0.0
F6ZV36_XENTR (tr|F6ZV36) DNA-directed RNA polymerase OS=Xenopus ... 779 0.0
I4YFX2_WALSC (tr|I4YFX2) DNA-directed RNA polymerase OS=Wallemia... 779 0.0
B7Z6Y7_HUMAN (tr|B7Z6Y7) cDNA FLJ53412, highly similar to DNA-di... 778 0.0
F2TK04_AJEDA (tr|F2TK04) DNA-directed RNA polymerase OS=Ajellomy... 778 0.0
C5JLQ2_AJEDS (tr|C5JLQ2) DNA-directed RNA polymerase OS=Ajellomy... 778 0.0
C5GTC3_AJEDR (tr|C5GTC3) DNA-directed RNA polymerase OS=Ajellomy... 778 0.0
F7A946_CALJA (tr|F7A946) DNA-directed RNA polymerase OS=Callithr... 778 0.0
E4V6W4_ARTGP (tr|E4V6W4) DNA-directed RNA polymerase OS=Arthrode... 778 0.0
C4Y3J9_CLAL4 (tr|C4Y3J9) DNA-directed RNA polymerase OS=Clavispo... 778 0.0
G3T0E9_LOXAF (tr|G3T0E9) DNA-directed RNA polymerase OS=Loxodont... 778 0.0
L8GCB6_GEOD2 (tr|L8GCB6) DNA-directed RNA polymerase OS=Geomyces... 776 0.0
F7FRH7_ORNAN (tr|F7FRH7) DNA-directed RNA polymerase OS=Ornithor... 776 0.0
M3ZZW5_XIPMA (tr|M3ZZW5) DNA-directed RNA polymerase OS=Xiphopho... 776 0.0
C3YW52_BRAFL (tr|C3YW52) DNA-directed RNA polymerase OS=Branchio... 775 0.0
K7F379_PELSI (tr|K7F379) DNA-directed RNA polymerase (Fragment) ... 774 0.0
K7F378_PELSI (tr|K7F378) DNA-directed RNA polymerase OS=Pelodisc... 774 0.0
G8ZPY2_TORDC (tr|G8ZPY2) DNA-directed RNA polymerase OS=Torulasp... 774 0.0
Q6PCJ2_XENLA (tr|Q6PCJ2) DNA-directed RNA polymerase OS=Xenopus ... 773 0.0
H2L5L1_ORYLA (tr|H2L5L1) DNA-directed RNA polymerase OS=Oryzias ... 773 0.0
B8LZJ7_TALSN (tr|B8LZJ7) DNA-directed RNA polymerase OS=Talaromy... 772 0.0
F7VLZ8_SORMK (tr|F7VLZ8) DNA-directed RNA polymerase OS=Sordaria... 771 0.0
C4JFY6_UNCRE (tr|C4JFY6) DNA-directed RNA polymerase OS=Uncinoca... 771 0.0
B6HRF9_PENCW (tr|B6HRF9) DNA-directed RNA polymerase OS=Penicill... 771 0.0
B2A911_PODAN (tr|B2A911) DNA-directed RNA polymerase OS=Podospor... 771 0.0
L7M0S2_9ACAR (tr|L7M0S2) DNA-directed RNA polymerase OS=Rhipicep... 770 0.0
Q4TBC6_TETNG (tr|Q4TBC6) DNA-directed RNA polymerase (Fragment) ... 769 0.0
N1PM86_MYCPJ (tr|N1PM86) Uncharacterized protein OS=Dothistroma ... 769 0.0
Q6FPQ9_CANGA (tr|Q6FPQ9) DNA-directed RNA polymerase OS=Candida ... 769 0.0
H2SUS2_TAKRU (tr|H2SUS2) DNA-directed RNA polymerase (Fragment) ... 768 0.0
F2S4E0_TRIT1 (tr|F2S4E0) DNA-directed RNA polymerase OS=Trichoph... 768 0.0
C5G0Y5_ARTOC (tr|C5G0Y5) DNA-directed RNA polymerase OS=Arthrode... 768 0.0
M9N088_ASHGS (tr|M9N088) FABR029Wp OS=Ashbya gossypii FDAG1 GN=F... 767 0.0
D4DAF6_TRIVH (tr|D4DAF6) DNA-directed RNA polymerase OS=Trichoph... 767 0.0
D4AUL7_ARTBC (tr|D4AUL7) DNA-directed RNA polymerase OS=Arthrode... 767 0.0
G0SBR6_CHATD (tr|G0SBR6) DNA-directed RNA polymerase OS=Chaetomi... 766 0.0
G2RFH4_THITE (tr|G2RFH4) DNA-directed RNA polymerase OS=Thielavi... 766 0.0
F2SKX1_TRIRC (tr|F2SKX1) DNA-directed RNA polymerase OS=Trichoph... 765 0.0
L1IAI4_GUITH (tr|L1IAI4) DNA-directed RNA polymerase OS=Guillard... 764 0.0
C1G8U3_PARBD (tr|C1G8U3) DNA-directed RNA polymerase OS=Paracocc... 764 0.0
G4UA57_NEUT9 (tr|G4UA57) DNA-directed RNA polymerase OS=Neurospo... 764 0.0
F8N0H1_NEUT8 (tr|F8N0H1) DNA-directed RNA polymerase OS=Neurospo... 764 0.0
A7TIY2_VANPO (tr|A7TIY2) DNA-directed RNA polymerase OS=Vanderwa... 763 0.0
Q2HEC1_CHAGB (tr|Q2HEC1) DNA-directed RNA polymerase OS=Chaetomi... 763 0.0
R8BST0_9PEZI (tr|R8BST0) Putative dna-directed rna polymerase i ... 763 0.0
G9NNK1_HYPAI (tr|G9NNK1) DNA-directed RNA polymerase OS=Hypocrea... 763 0.0
C0S2A9_PARBP (tr|C0S2A9) DNA-directed RNA polymerase OS=Paracocc... 763 0.0
Q6CW73_KLULA (tr|Q6CW73) DNA-directed RNA polymerase OS=Kluyvero... 762 0.0
L5KV61_PTEAL (tr|L5KV61) DNA-directed RNA polymerase OS=Pteropus... 762 0.0
J4VYK0_BEAB2 (tr|J4VYK0) DNA-directed RNA polymerase OS=Beauveri... 762 0.0
G0VD52_NAUCC (tr|G0VD52) DNA-directed RNA polymerase OS=Naumovoz... 761 0.0
G0WEC6_NAUDC (tr|G0WEC6) DNA-directed RNA polymerase OS=Naumovoz... 761 0.0
F0ZVX5_DICPU (tr|F0ZVX5) DNA-directed RNA polymerase OS=Dictyost... 761 0.0
B6QA38_PENMQ (tr|B6QA38) DNA-directed RNA polymerase OS=Penicill... 761 0.0
N4V4F2_COLOR (tr|N4V4F2) DNA-directed RNA polymerase i subunit b... 761 0.0
J7RY09_KAZNA (tr|J7RY09) DNA-directed RNA polymerase OS=Kazachst... 761 0.0
G2Q3M7_THIHA (tr|G2Q3M7) DNA-directed RNA polymerase OS=Thielavi... 760 0.0
H2ASH4_KAZAF (tr|H2ASH4) DNA-directed RNA polymerase OS=Kazachst... 759 0.0
E9ED63_METAQ (tr|E9ED63) DNA-directed RNA polymerase OS=Metarhiz... 759 0.0
C5DNH9_LACTC (tr|C5DNH9) DNA-directed RNA polymerase OS=Lachance... 759 0.0
H0Z4D1_TAEGU (tr|H0Z4D1) DNA-directed RNA polymerase (Fragment) ... 759 0.0
D3B127_POLPA (tr|D3B127) DNA-directed RNA polymerase OS=Polyspho... 758 0.0
M1VXQ2_CLAPU (tr|M1VXQ2) DNA-directed RNA polymerase OS=Clavicep... 758 0.0
C5E449_ZYGRC (tr|C5E449) DNA-directed RNA polymerase OS=Zygosacc... 758 0.0
J4HXL5_FIBRA (tr|J4HXL5) DNA-directed RNA polymerase OS=Fibropor... 758 0.0
M2YUG9_9PEZI (tr|M2YUG9) DNA-directed RNA polymerase OS=Pseudoce... 758 0.0
H0H2A4_9SACH (tr|H0H2A4) DNA-directed RNA polymerase OS=Saccharo... 757 0.0
E7QLS3_YEASZ (tr|E7QLS3) DNA-directed RNA polymerase OS=Saccharo... 757 0.0
C8ZJ35_YEAS8 (tr|C8ZJ35) DNA-directed RNA polymerase OS=Saccharo... 757 0.0
B3LL71_YEAS1 (tr|B3LL71) DNA-directed RNA polymerase OS=Saccharo... 757 0.0
L2G8A7_COLGN (tr|L2G8A7) DNA-directed RNA polymerase OS=Colletot... 757 0.0
C7GV35_YEAS2 (tr|C7GV35) DNA-directed RNA polymerase OS=Saccharo... 757 0.0
I2H4Z4_TETBL (tr|I2H4Z4) DNA-directed RNA polymerase OS=Tetrapis... 757 0.0
K8F4S1_9CHLO (tr|K8F4S1) DNA-directed RNA polymerase OS=Bathycoc... 756 0.0
G2WPJ0_YEASK (tr|G2WPJ0) DNA-directed RNA polymerase OS=Saccharo... 756 0.0
A6ZWQ5_YEAS7 (tr|A6ZWQ5) DNA-directed RNA polymerase OS=Saccharo... 756 0.0
R0K0E7_ANAPL (tr|R0K0E7) DNA-directed RNA polymerase I subunit R... 756 0.0
J8Q0Z3_SACAR (tr|J8Q0Z3) DNA-directed RNA polymerase OS=Saccharo... 756 0.0
F0X9F9_GROCL (tr|F0X9F9) DNA-directed RNA polymerase OS=Grosmann... 755 0.0
F1NLV9_CHICK (tr|F1NLV9) DNA-directed RNA polymerase OS=Gallus g... 755 0.0
M7U3X5_BOTFU (tr|M7U3X5) Putative dna-directed rna polymerase i ... 754 0.0
J9N263_FUSO4 (tr|J9N263) DNA-directed RNA polymerase OS=Fusarium... 754 0.0
H1UXI4_COLHI (tr|H1UXI4) DNA-directed RNA polymerase OS=Colletot... 754 0.0
K9G6V4_PEND1 (tr|K9G6V4) DNA-directed RNA polymerase OS=Penicill... 754 0.0
K9F9Z4_PEND2 (tr|K9F9Z4) DNA-directed RNA polymerase OS=Penicill... 754 0.0
E9ETK9_METAR (tr|E9ETK9) DNA-directed RNA polymerase OS=Metarhiz... 754 0.0
K1WSJ7_MARBU (tr|K1WSJ7) DNA-directed RNA polymerase OS=Marssoni... 754 0.0
B7FQD9_PHATC (tr|B7FQD9) DNA-directed RNA polymerase (Fragment) ... 754 0.0
H6C3D5_EXODN (tr|H6C3D5) DNA-directed RNA polymerase OS=Exophial... 753 0.0
F9G553_FUSOF (tr|F9G553) DNA-directed RNA polymerase OS=Fusarium... 753 0.0
G1N5G7_MELGA (tr|G1N5G7) DNA-directed RNA polymerase (Fragment) ... 753 0.0
G2X012_VERDV (tr|G2X012) DNA-directed RNA polymerase OS=Verticil... 752 0.0
F2ULU0_SALS5 (tr|F2ULU0) DNA-directed RNA polymerase OS=Salpingo... 750 0.0
M7S6P3_9PEZI (tr|M7S6P3) Putative dna-directed rna polymerase i ... 750 0.0
M2RHQ8_COCSA (tr|M2RHQ8) DNA-directed RNA polymerase OS=Bipolari... 750 0.0
E3QED8_COLGM (tr|E3QED8) DNA-directed RNA polymerase OS=Colletot... 750 0.0
G8BWW0_TETPH (tr|G8BWW0) DNA-directed RNA polymerase OS=Tetrapis... 750 0.0
N1JDT9_ERYGR (tr|N1JDT9) DNA-directed RNA polymerase I OS=Blumer... 749 0.0
E7M1M2_YEASV (tr|E7M1M2) DNA-directed RNA polymerase OS=Saccharo... 749 0.0
G3JS57_CORMM (tr|G3JS57) DNA-directed RNA polymerase OS=Cordycep... 749 0.0
R7YPQ9_9EURO (tr|R7YPQ9) DNA-directed RNA polymerase I subunit R... 749 0.0
N4WMR7_COCHE (tr|N4WMR7) Uncharacterized protein OS=Bipolaris ma... 749 0.0
M2V4U6_COCHE (tr|M2V4U6) DNA-directed RNA polymerase OS=Bipolari... 749 0.0
A9VCU6_MONBE (tr|A9VCU6) DNA-directed RNA polymerase OS=Monosiga... 748 0.0
G8JP95_ERECY (tr|G8JP95) DNA-directed RNA polymerase OS=Eremothe... 747 0.0
J3NK25_GAGT3 (tr|J3NK25) DNA-directed RNA polymerase OS=Gaeumann... 746 0.0
R7TEI7_9ANNE (tr|R7TEI7) Uncharacterized protein (Fragment) OS=C... 746 0.0
M4G2Q0_MAGP6 (tr|M4G2Q0) DNA-directed RNA polymerase OS=Magnapor... 745 0.0
H2SUS0_TAKRU (tr|H2SUS0) DNA-directed RNA polymerase OS=Takifugu... 745 0.0
H0EW85_GLAL7 (tr|H0EW85) DNA-directed RNA polymerase OS=Glarea l... 744 0.0
R0JVU0_SETTU (tr|R0JVU0) Uncharacterized protein OS=Setosphaeria... 744 0.0
Q22C62_TETTS (tr|Q22C62) DNA-directed RNA polymerase OS=Tetrahym... 744 0.0
F2DY47_HORVD (tr|F2DY47) DNA-directed RNA polymerase OS=Hordeum ... 740 0.0
B8CA95_THAPS (tr|B8CA95) DNA-directed RNA polymerase OS=Thalassi... 739 0.0
F6S181_CIOIN (tr|F6S181) DNA-directed RNA polymerase (Fragment) ... 738 0.0
L7JL50_MAGOR (tr|L7JL50) DNA-directed RNA polymerase OS=Magnapor... 738 0.0
L7IIB1_MAGOR (tr|L7IIB1) DNA-directed RNA polymerase OS=Magnapor... 738 0.0
G4MTU9_MAGO7 (tr|G4MTU9) DNA-directed RNA polymerase OS=Magnapor... 737 0.0
D8U8Q8_VOLCA (tr|D8U8Q8) Putative uncharacterized protein OS=Vol... 736 0.0
F4Q7L9_DICFS (tr|F4Q7L9) DNA-directed RNA polymerase OS=Dictyost... 733 0.0
K1PKY6_CRAGI (tr|K1PKY6) DNA-directed RNA polymerase OS=Crassost... 731 0.0
M0UYE1_HORVD (tr|M0UYE1) DNA-directed RNA polymerase OS=Hordeum ... 730 0.0
A4RSZ5_OSTLU (tr|A4RSZ5) DNA-directed RNA polymerase OS=Ostreoco... 728 0.0
E9HT05_DAPPU (tr|E9HT05) DNA-directed RNA polymerase OS=Daphnia ... 725 0.0
F1LM57_RAT (tr|F1LM57) DNA-directed RNA polymerase OS=Rattus nor... 721 0.0
M3YE11_MUSPF (tr|M3YE11) DNA-directed RNA polymerase OS=Mustela ... 718 0.0
J0XIX3_LOALO (tr|J0XIX3) DNA-directed RNA polymerase OS=Loa loa ... 713 0.0
A6RAC1_AJECN (tr|A6RAC1) DNA-directed RNA polymerase OS=Ajellomy... 713 0.0
D8QY62_SELML (tr|D8QY62) DNA-directed RNA polymerase OS=Selagine... 712 0.0
K7IWJ3_NASVI (tr|K7IWJ3) DNA-directed RNA polymerase (Fragment) ... 711 0.0
G0RRF6_HYPJQ (tr|G0RRF6) DNA-directed RNA polymerase OS=Hypocrea... 711 0.0
C9SLU9_VERA1 (tr|C9SLU9) DNA-directed RNA polymerase OS=Verticil... 711 0.0
Q0CKF7_ASPTN (tr|Q0CKF7) DNA-directed RNA polymerase I polypepti... 709 0.0
E2B687_HARSA (tr|E2B687) DNA-directed RNA polymerase OS=Harpegna... 708 0.0
E9IAZ0_SOLIN (tr|E9IAZ0) DNA-directed RNA polymerase (Fragment) ... 706 0.0
B4Q634_DROSI (tr|B4Q634) DNA-directed RNA polymerase OS=Drosophi... 700 0.0
G9N887_HYPVG (tr|G9N887) DNA-directed RNA polymerase OS=Hypocrea... 699 0.0
C1GRK6_PARBA (tr|C1GRK6) DNA-directed RNA polymerase OS=Paracocc... 699 0.0
F1KSP0_ASCSU (tr|F1KSP0) DNA-directed RNA polymerase OS=Ascaris ... 699 0.0
B4ICW4_DROSE (tr|B4ICW4) DNA-directed RNA polymerase OS=Drosophi... 698 0.0
H9KLB3_APIME (tr|H9KLB3) DNA-directed RNA polymerase OS=Apis mel... 697 0.0
B3N7P8_DROER (tr|B3N7P8) DNA-directed RNA polymerase OS=Drosophi... 697 0.0
A5E7A2_LODEL (tr|A5E7A2) DNA-directed RNA polymerase OS=Lodderom... 696 0.0
R1G498_9PEZI (tr|R1G498) Putative dna-directed rna polymerase i ... 696 0.0
B4N0U3_DROWI (tr|B4N0U3) DNA-directed RNA polymerase OS=Drosophi... 695 0.0
B4P2D8_DROYA (tr|B4P2D8) DNA-directed RNA polymerase OS=Drosophi... 694 0.0
Q29N37_DROPS (tr|Q29N37) DNA-directed RNA polymerase OS=Drosophi... 694 0.0
J9BK62_WUCBA (tr|J9BK62) DNA-directed RNA polymerase OS=Wucherer... 694 0.0
R7VPN4_COLLI (tr|R7VPN4) DNA-directed RNA polymerase I subunit R... 694 0.0
J9ES79_9SPIT (tr|J9ES79) DNA-directed RNA polymerase OS=Oxytrich... 694 0.0
B3MUI2_DROAN (tr|B3MUI2) DNA-directed RNA polymerase OS=Drosophi... 693 0.0
B4KFJ3_DROMO (tr|B4KFJ3) DNA-directed RNA polymerase OS=Drosophi... 691 0.0
G0MLX0_CAEBE (tr|G0MLX0) DNA-directed RNA polymerase OS=Caenorha... 689 0.0
E3MFI3_CAERE (tr|E3MFI3) DNA-directed RNA polymerase OS=Caenorha... 689 0.0
A8PJT7_BRUMA (tr|A8PJT7) DNA-directed RNA polymerase OS=Brugia m... 689 0.0
B5VTH1_YEAS6 (tr|B5VTH1) DNA-directed RNA polymerase (Fragment) ... 689 0.0
N9V5M0_ENTHI (tr|N9V5M0) DNA-directed RNA polymerase I subunit R... 687 0.0
M7W4W4_ENTHI (tr|M7W4W4) DNA-directed RNA polymerase I subunit R... 687 0.0
M3S3B8_ENTHI (tr|M3S3B8) DNA-directed RNA polymerase OS=Entamoeb... 687 0.0
M2RW06_ENTHI (tr|M2RW06) DNA-directed RNA polymerase OS=Entamoeb... 687 0.0
C4MAB3_ENTHI (tr|C4MAB3) DNA-directed RNA polymerase OS=Entamoeb... 687 0.0
B0ERH0_ENTDS (tr|B0ERH0) DNA-directed RNA polymerase OS=Entamoeb... 687 0.0
K2H4M4_ENTNP (tr|K2H4M4) DNA-directed RNA polymerase OS=Entamoeb... 686 0.0
B4JDN9_DROGR (tr|B4JDN9) DNA-directed RNA polymerase OS=Drosophi... 686 0.0
B0W5T2_CULQU (tr|B0W5T2) DNA-directed RNA polymerase OS=Culex qu... 686 0.0
N4UKS0_FUSOX (tr|N4UKS0) DNA-directed RNA polymerase I subunit R... 685 0.0
N1RXE1_FUSOX (tr|N1RXE1) DNA-directed RNA polymerase I subunit R... 685 0.0
R1DAM8_EMIHU (tr|R1DAM8) Uncharacterized protein OS=Emiliania hu... 684 0.0
A0BY74_PARTE (tr|A0BY74) DNA-directed RNA polymerase OS=Parameci... 684 0.0
R1DX67_EMIHU (tr|R1DX67) Uncharacterized protein OS=Emiliania hu... 684 0.0
A0E2A7_PARTE (tr|A0E2A7) DNA-directed RNA polymerase OS=Parameci... 683 0.0
B4LTK7_DROVI (tr|B4LTK7) DNA-directed RNA polymerase OS=Drosophi... 681 0.0
Q27493_CAEEL (tr|Q27493) DNA-directed RNA polymerase OS=Caenorha... 679 0.0
K3UN29_FUSPC (tr|K3UN29) DNA-directed RNA polymerase OS=Fusarium... 679 0.0
H2W645_CAEJA (tr|H2W645) DNA-directed RNA polymerase OS=Caenorha... 679 0.0
I1RNP3_GIBZE (tr|I1RNP3) DNA-directed RNA polymerase OS=Gibberel... 677 0.0
C7YYG1_NECH7 (tr|C7YYG1) DNA-directed RNA polymerase OS=Nectria ... 677 0.0
M2X825_GALSU (tr|M2X825) DNA-directed RNA polymerase OS=Galdieri... 676 0.0
J9E9J9_AEDAE (tr|J9E9J9) DNA-directed RNA polymerase OS=Aedes ae... 675 0.0
A8XVM2_CAEBR (tr|A8XVM2) DNA-directed RNA polymerase OS=Caenorha... 674 0.0
G0PGG1_CAEBE (tr|G0PGG1) DNA-directed RNA polymerase OS=Caenorha... 672 0.0
A7F6Y6_SCLS1 (tr|A7F6Y6) DNA-directed RNA polymerase OS=Scleroti... 669 0.0
M2W9X3_GALSU (tr|M2W9X3) DNA-directed RNA polymerase OS=Galdieri... 665 0.0
Q01EE5_OSTTA (tr|Q01EE5) DNA-directed RNA polymerase OS=Ostreoco... 663 0.0
E2AY84_CAMFO (tr|E2AY84) DNA-directed RNA polymerase OS=Camponot... 661 0.0
K0RK47_THAOC (tr|K0RK47) DNA-directed RNA polymerase OS=Thalassi... 660 0.0
B3RKF5_TRIAD (tr|B3RKF5) DNA-directed RNA polymerase OS=Trichopl... 659 0.0
I0YJ34_9CHLO (tr|I0YJ34) DNA-directed RNA polymerase (Fragment) ... 659 0.0
C5LSL6_PERM5 (tr|C5LSL6) DNA-directed RNA polymerase OS=Perkinsu... 658 0.0
E0V8Y6_PEDHC (tr|E0V8Y6) DNA-directed RNA polymerase OS=Pediculu... 650 0.0
D6WVZ3_TRICA (tr|D6WVZ3) DNA-directed RNA polymerase OS=Triboliu... 643 0.0
Q7QG74_ANOGA (tr|Q7QG74) DNA-directed RNA polymerase (Fragment) ... 643 0.0
G1KG75_ANOCA (tr|G1KG75) DNA-directed RNA polymerase (Fragment) ... 642 0.0
J9K6G2_ACYPI (tr|J9K6G2) DNA-directed RNA polymerase OS=Acyrthos... 637 e-180
B4G8A6_DROPE (tr|B4G8A6) DNA-directed RNA polymerase OS=Drosophi... 635 e-179
A2EN74_TRIVA (tr|A2EN74) DNA-directed RNA polymerase OS=Trichomo... 634 e-179
A8I793_CHLRE (tr|A8I793) DNA-directed RNA polymerase OS=Chlamydo... 628 e-177
E5SVD8_TRISP (tr|E5SVD8) DNA-directed RNA polymerase OS=Trichine... 627 e-177
F0YKW7_AURAN (tr|F0YKW7) DNA-directed RNA polymerase OS=Aureococ... 627 e-177
H2KSQ8_CLOSI (tr|H2KSQ8) DNA-directed RNA polymerase I subunit R... 622 e-175
G6CWR9_DANPL (tr|G6CWR9) DNA-directed RNA polymerase OS=Danaus p... 613 e-172
B2VTW1_PYRTR (tr|B2VTW1) DNA-directed RNA polymerase OS=Pyrenoph... 611 e-172
I1FIZ7_AMPQE (tr|I1FIZ7) DNA-directed RNA polymerase (Fragment) ... 609 e-171
K2RSE5_MACPH (tr|K2RSE5) DNA-directed RNA polymerase OS=Macropho... 607 e-170
E4YK01_OIKDI (tr|E4YK01) DNA-directed RNA polymerase OS=Oikopleu... 606 e-170
J9DIF3_EDHAE (tr|J9DIF3) DNA-directed RNA polymerase OS=Edhazard... 600 e-169
R0KPL9_NOSBO (tr|R0KPL9) DNA-directed RNA polymerase I subunit R... 600 e-168
F2PUD8_TRIEC (tr|F2PUD8) DNA-directed RNA polymerase OS=Trichoph... 598 e-168
M1UWS4_CYAME (tr|M1UWS4) DNA-directed RNA polymerase OS=Cyanidio... 598 e-168
R0MKL5_NOSBO (tr|R0MKL5) DNA-directed RNA polymerase I subunit R... 593 e-167
R7Q7W5_CHOCR (tr|R7Q7W5) RNA Polymerase IV Small Subunit OS=Chon... 593 e-166
G4VEG3_SCHMA (tr|G4VEG3) Putative dna-directed RNA polymerase I ... 593 e-166
Q8SSB7_ENCCU (tr|Q8SSB7) DNA-directed RNA polymerase OS=Encephal... 590 e-165
M1K9S8_ENCCN (tr|M1K9S8) DNA-directed RNA polymerase OS=Encephal... 589 e-165
M7C7K6_CHEMY (tr|M7C7K6) DNA-directed RNA polymerase I subunit R... 581 e-163
I6TTN0_ENCHA (tr|I6TTN0) DNA-directed RNA polymerase OS=Encephal... 580 e-162
C4V829_NOSCE (tr|C4V829) DNA-directed RNA polymerase OS=Nosema c... 580 e-162
E4YMD9_OIKDI (tr|E4YMD9) DNA-directed RNA polymerase OS=Oikopleu... 575 e-161
I7ALY0_ENCRO (tr|I7ALY0) DNA-directed RNA polymerase OS=Encephal... 568 e-159
I3EP53_NEMP1 (tr|I3EP53) DNA-directed RNA polymerase OS=Nematoci... 560 e-157
I3EGC6_NEMP3 (tr|I3EGC6) DNA-directed RNA polymerase OS=Nematoci... 560 e-157
L0B144_BABEQ (tr|L0B144) DNA-directed RNA polymerase OS=Babesia ... 558 e-156
A7AT93_BABBO (tr|A7AT93) DNA-directed RNA polymerase OS=Babesia ... 557 e-156
D2VXL3_NAEGR (tr|D2VXL3) DNA-directed RNA polymerase OS=Naegleri... 553 e-155
E0S645_ENCIT (tr|E0S645) DNA-directed RNA polymerase OS=Encephal... 547 e-153
A7SSE2_NEMVE (tr|A7SSE2) DNA-directed RNA polymerase OS=Nematost... 545 e-152
G7NAX6_MACMU (tr|G7NAX6) DNA-directed RNA polymerase OS=Macaca m... 543 e-152
Q9BSR4_HUMAN (tr|Q9BSR4) DNA-directed RNA polymerase (Fragment) ... 542 e-151
Q4QRK8_HUMAN (tr|Q4QRK8) DNA-directed RNA polymerase (Fragment) ... 541 e-151
F0V8Y7_NEOCL (tr|F0V8Y7) DNA-directed RNA polymerase OS=Neospora... 540 e-151
L2GLN7_VITCO (tr|L2GLN7) DNA-directed RNA polymerase OS=Vittafor... 540 e-150
H2SUS1_TAKRU (tr|H2SUS1) DNA-directed RNA polymerase OS=Takifugu... 535 e-149
Q6DKI9_HUMAN (tr|Q6DKI9) DNA-directed RNA polymerase (Fragment) ... 531 e-148
A9BKT9_HEMAN (tr|A9BKT9) DNA-directed RNA polymerase OS=Hemiselm... 530 e-147
Q4N2L4_THEPA (tr|Q4N2L4) DNA-directed RNA polymerase OS=Theileri... 529 e-147
M0UYE2_HORVD (tr|M0UYE2) DNA-directed RNA polymerase OS=Hordeum ... 528 e-147
Q2TAM4_HUMAN (tr|Q2TAM4) DNA-directed RNA polymerase OS=Homo sap... 527 e-147
F8W898_HUMAN (tr|F8W898) DNA-directed RNA polymerase OS=Homo sap... 527 e-147
F6QB45_CALJA (tr|F6QB45) DNA-directed RNA polymerase OS=Callithr... 526 e-146
I7IFS4_BABMI (tr|I7IFS4) DNA-directed RNA polymerase OS=Babesia ... 521 e-145
J7G2H5_9CRYP (tr|J7G2H5) DNA-directed RNA polymerase OS=Chroomon... 521 e-145
A9CTL9_ENTBH (tr|A9CTL9) DNA-directed RNA polymerase OS=Enterocy... 520 e-144
G3U8E2_LOXAF (tr|G3U8E2) DNA-directed RNA polymerase OS=Loxodont... 519 e-144
J4CE26_THEOR (tr|J4CE26) DNA-directed RNA polymerase OS=Theileri... 518 e-144
M5VU06_PRUPE (tr|M5VU06) Uncharacterized protein (Fragment) OS=P... 514 e-143
Q4U9X6_THEAN (tr|Q4U9X6) DNA-directed RNA polymerase OS=Theileri... 510 e-141
H8ZCK7_NEMS1 (tr|H8ZCK7) DNA-directed RNA polymerase OS=Nematoci... 504 e-140
Q98S72_GUITH (tr|Q98S72) DNA-directed RNA polymerase OS=Guillard... 498 e-138
H9JMQ1_BOMMO (tr|H9JMQ1) DNA-directed RNA polymerase OS=Bombyx m... 489 e-135
G0QVB3_ICHMG (tr|G0QVB3) Putative uncharacterized protein OS=Ich... 487 e-135
G9KHR3_MUSPF (tr|G9KHR3) DNA-directed RNA polymerase (Fragment) ... 487 e-134
Q2N148_SUBFI (tr|Q2N148) DNA-directed RNA polymerase (Fragment) ... 474 e-131
F2HHE3_9CRYP (tr|F2HHE3) DNA-directed RNA polymerase OS=Cryptomo... 467 e-129
G2XXR9_BOTF4 (tr|G2XXR9) DNA-directed RNA polymerase OS=Botryoti... 444 e-122
Q9H6S8_HUMAN (tr|Q9H6S8) DNA-directed RNA polymerase OS=Homo sap... 444 e-122
M5WEF1_PRUPE (tr|M5WEF1) Uncharacterized protein OS=Prunus persi... 442 e-121
F7A8L9_MACMU (tr|F7A8L9) DNA-directed RNA polymerase OS=Macaca m... 441 e-121
E1Z5A3_CHLVA (tr|E1Z5A3) Putative uncharacterized protein (Fragm... 423 e-115
B6KTL0_TOXGO (tr|B6KTL0) DNA-directed RNA polymerase OS=Toxoplas... 418 e-114
B9QHP7_TOXGO (tr|B9QHP7) DNA-directed RNA polymerase OS=Toxoplas... 418 e-114
B9Q110_TOXGO (tr|B9Q110) DNA-directed RNA polymerase OS=Toxoplas... 418 e-114
H3HRH1_STRPU (tr|H3HRH1) Uncharacterized protein (Fragment) OS=S... 417 e-114
A8Q440_MALGO (tr|A8Q440) DNA-directed RNA polymerase OS=Malassez... 403 e-109
E3XG86_ANODA (tr|E3XG86) DNA-directed RNA polymerase OS=Anophele... 402 e-109
F4WB73_ACREC (tr|F4WB73) DNA-directed RNA polymerase I subunit R... 401 e-109
Q0UYS5_PHANO (tr|Q0UYS5) DNA-directed RNA polymerase OS=Phaeosph... 401 e-109
Q95JH9_MACFA (tr|Q95JH9) DNA-directed RNA polymerase OS=Macaca f... 400 e-108
M2MWL2_9PEZI (tr|M2MWL2) DNA-directed RNA polymerase OS=Baudoini... 400 e-108
H9HP70_ATTCE (tr|H9HP70) Uncharacterized protein OS=Atta cephalo... 395 e-107
D8LGZ7_ECTSI (tr|D8LGZ7) Putative uncharacterized protein (Fragm... 395 e-107
C5LX45_PERM5 (tr|C5LX45) DNA-directed RNA polymerase OS=Perkinsu... 387 e-105
N6TC52_9CUCU (tr|N6TC52) Uncharacterized protein (Fragment) OS=D... 386 e-104
M5BIZ2_9HOMO (tr|M5BIZ2) DNA-directed RNA polymerase I subunit A... 386 e-104
E3X721_ANODA (tr|E3X721) DNA-directed RNA polymerase OS=Anophele... 384 e-104
H9KCM7_APIME (tr|H9KCM7) DNA-directed RNA polymerase OS=Apis mel... 380 e-102
D6WK19_TRICA (tr|D6WK19) DNA-directed RNA polymerase OS=Triboliu... 379 e-102
D5GJJ9_TUBMM (tr|D5GJJ9) DNA-directed RNA polymerase OS=Tuber me... 379 e-102
J9E9F1_AEDAE (tr|J9E9F1) DNA-directed RNA polymerase OS=Aedes ae... 378 e-102
Q7Q416_ANOGA (tr|Q7Q416) DNA-directed RNA polymerase (Fragment) ... 374 e-100
K7IUQ9_NASVI (tr|K7IUQ9) DNA-directed RNA polymerase OS=Nasonia ... 373 e-100
H9JWY0_BOMMO (tr|H9JWY0) DNA-directed RNA polymerase OS=Bombyx m... 372 e-100
B4J5G6_DROGR (tr|B4J5G6) DNA-directed RNA polymerase OS=Drosophi... 372 e-100
H8X656_CANO9 (tr|H8X656) DNA-directed RNA polymerase OS=Candida ... 372 e-100
A5E0Z1_LODEL (tr|A5E0Z1) DNA-directed RNA polymerase OS=Lodderom... 371 e-100
B4GGQ4_DROPE (tr|B4GGQ4) DNA-directed RNA polymerase OS=Drosophi... 371 e-100
G8BG27_CANPC (tr|G8BG27) DNA-directed RNA polymerase OS=Candida ... 371 e-100
Q28ZV6_DROPS (tr|Q28ZV6) DNA-directed RNA polymerase OS=Drosophi... 371 e-99
H3C732_TETNG (tr|H3C732) DNA-directed RNA polymerase (Fragment) ... 370 1e-99
B4KPU7_DROMO (tr|B4KPU7) DNA-directed RNA polymerase OS=Drosophi... 369 3e-99
C5DEU3_LACTC (tr|C5DEU3) DNA-directed RNA polymerase OS=Lachance... 369 4e-99
A5DLE5_PICGU (tr|A5DLE5) DNA-directed RNA polymerase OS=Meyerozy... 369 4e-99
K2I0A2_ENTNP (tr|K2I0A2) DNA-directed RNA polymerase OS=Entamoeb... 368 6e-99
B4QC69_DROSI (tr|B4QC69) DNA-directed RNA polymerase OS=Drosophi... 368 6e-99
B4HNX0_DROSE (tr|B4HNX0) DNA-directed RNA polymerase OS=Drosophi... 368 6e-99
B4MR22_DROWI (tr|B4MR22) DNA-directed RNA polymerase OS=Drosophi... 368 6e-99
A2AP84_MOUSE (tr|A2AP84) DNA-directed RNA polymerase I subunit R... 368 7e-99
G8YDB2_PICSO (tr|G8YDB2) DNA-directed RNA polymerase OS=Pichia s... 368 8e-99
B4LKV4_DROVI (tr|B4LKV4) DNA-directed RNA polymerase OS=Drosophi... 367 9e-99
I3KBR7_ORENI (tr|I3KBR7) DNA-directed RNA polymerase (Fragment) ... 367 1e-98
B3MH37_DROAN (tr|B3MH37) DNA-directed RNA polymerase OS=Drosophi... 367 1e-98
I2GYQ1_TETBL (tr|I2GYQ1) DNA-directed RNA polymerase OS=Tetrapis... 367 1e-98
B4P5Q3_DROYA (tr|B4P5Q3) DNA-directed RNA polymerase OS=Drosophi... 367 2e-98
G8YFR8_PICSO (tr|G8YFR8) DNA-directed RNA polymerase OS=Pichia s... 367 2e-98
B3NS93_DROER (tr|B3NS93) DNA-directed RNA polymerase OS=Drosophi... 366 2e-98
H3G9F7_PHYRM (tr|H3G9F7) DNA-directed RNA polymerase OS=Phytopht... 366 3e-98
Q4S7G7_TETNG (tr|Q4S7G7) DNA-directed RNA polymerase (Fragment) ... 365 4e-98
G6DHA6_DANPL (tr|G6DHA6) DNA-directed RNA polymerase OS=Danaus p... 365 4e-98
H2TAU8_TAKRU (tr|H2TAU8) DNA-directed RNA polymerase OS=Takifugu... 365 4e-98
R7TT13_9ANNE (tr|R7TT13) Uncharacterized protein OS=Capitella te... 365 5e-98
K7K145_SOYBN (tr|K7K145) DNA-directed RNA polymerase OS=Glycine ... 365 5e-98
B5RUZ7_DEBHA (tr|B5RUZ7) DNA-directed RNA polymerase OS=Debaryom... 365 5e-98
E4Y8I9_OIKDI (tr|E4Y8I9) DNA-directed RNA polymerase OS=Oikopleu... 365 5e-98
G5ABA9_PHYSP (tr|G5ABA9) DNA-directed RNA polymerase OS=Phytopht... 365 7e-98
E3SAA1_PYRTT (tr|E3SAA1) DNA-directed RNA polymerase OS=Pyrenoph... 365 7e-98
D0N9M5_PHYIT (tr|D0N9M5) DNA-directed RNA polymerase OS=Phytopht... 364 1e-97
M7X8Z1_RHOTO (tr|M7X8Z1) DNA-directed RNA polymerase III subunit... 364 1e-97
G3PDG5_GASAC (tr|G3PDG5) DNA-directed RNA polymerase OS=Gasteros... 364 1e-97
E9GN85_DAPPU (tr|E9GN85) DNA-directed RNA polymerase OS=Daphnia ... 364 1e-97
G3PDF7_GASAC (tr|G3PDF7) DNA-directed RNA polymerase (Fragment) ... 363 2e-97
M3ZHD1_XIPMA (tr|M3ZHD1) DNA-directed RNA polymerase OS=Xiphopho... 363 2e-97
H0ZLB7_TAEGU (tr|H0ZLB7) DNA-directed RNA polymerase OS=Taeniopy... 363 2e-97
B6VBN7_CAEBE (tr|B6VBN7) DNA-directed RNA polymerase OS=Caenorha... 363 2e-97
Q27492_CAEEL (tr|Q27492) DNA-directed RNA polymerase OS=Caenorha... 363 3e-97
K0KLK2_WICCF (tr|K0KLK2) DNA-directed RNA polymerase OS=Wickerha... 363 3e-97
E4XKM9_OIKDI (tr|E4XKM9) Whole genome shotgun assembly, referenc... 362 3e-97
G3HNW4_CRIGR (tr|G3HNW4) DNA-directed RNA polymerase OS=Cricetul... 362 4e-97
E1BRJ4_CHICK (tr|E1BRJ4) DNA-directed RNA polymerase OS=Gallus g... 362 5e-97
F1QQA2_DANRE (tr|F1QQA2) DNA-directed RNA polymerase (Fragment) ... 361 7e-97
K7GBE5_PELSI (tr|K7GBE5) DNA-directed RNA polymerase OS=Pelodisc... 361 7e-97
H2AXY4_KAZAF (tr|H2AXY4) DNA-directed RNA polymerase OS=Kazachst... 361 7e-97
E3LZ13_CAERE (tr|E3LZ13) DNA-directed RNA polymerase OS=Caenorha... 361 8e-97
C5DY85_ZYGRC (tr|C5DY85) DNA-directed RNA polymerase OS=Zygosacc... 361 1e-96
G2WN79_YEASK (tr|G2WN79) DNA-directed RNA polymerase OS=Saccharo... 360 1e-96
H0H1B7_9SACH (tr|H0H1B7) DNA-directed RNA polymerase OS=Saccharo... 360 1e-96
A2BN33_HYPBU (tr|A2BN33) DNA-directed RNA polymerase OS=Hyperthe... 360 1e-96
F6X4Z9_ORNAN (tr|F6X4Z9) DNA-directed RNA polymerase (Fragment) ... 360 2e-96
E7Q9A6_YEASB (tr|E7Q9A6) DNA-directed RNA polymerase OS=Saccharo... 360 2e-96
H3D3L4_TETNG (tr|H3D3L4) DNA-directed RNA polymerase OS=Tetraodo... 360 2e-96
D3ZV30_RAT (tr|D3ZV30) DNA-directed RNA polymerase OS=Rattus nor... 360 2e-96
M1ATE1_SOLTU (tr|M1ATE1) DNA-directed RNA polymerase OS=Solanum ... 360 2e-96
N1NX57_YEASX (tr|N1NX57) Ret1p OS=Saccharomyces cerevisiae CEN.P... 360 2e-96
C8ZGW3_YEAS8 (tr|C8ZGW3) DNA-directed RNA polymerase OS=Saccharo... 360 2e-96
C7GWH5_YEAS2 (tr|C7GWH5) DNA-directed RNA polymerase OS=Saccharo... 360 2e-96
>I1M0N3_SOYBN (tr|I1M0N3) DNA-directed RNA polymerase (Fragment) OS=Glycine max
PE=3 SV=2
Length = 1226
Score = 1783 bits (4619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 855/1000 (85%), Positives = 913/1000 (91%), Gaps = 8/1000 (0%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS VRNSFS RREGYTDKAVVIRCVRADQSSL+V+LYYLRN SARLGFW++GREYLLPVG
Sbjct: 223 MSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVG 282
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
I+LKALIDT+D EI NL SCYNEKYEKGKGAVGTQ V +RA++I++E+R LSLFTRLQC
Sbjct: 283 IILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQC 342
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L YIGEHFQP++ ELKNDSY VA AVLKD + VHLD+NFDKFNLLIFMLQKLFSL+D T
Sbjct: 343 LEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQT 402
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
SV DNPDSLQN EVLLPGHLITLYLKEKLEDWLQ G+ DE+ +KS FDFS+I VK
Sbjct: 403 SVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVK 462
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K DK + +ST++ENMLKTGRLVT TGLDLQQRAGYTVQA+RLN+LRFLSHFRAVHRG
Sbjct: 463 KVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRG 522
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT RITS+FDSQG+IKDYFK
Sbjct: 523 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFK 582
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
IK+SIL++L++ GMT +PK+ LPGPPE LTVLLDGC+VGCI S EVEK+VAHIRELKVS
Sbjct: 583 IKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVS 642
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
S A+IPDD+EVGYVPLSMGGAYPGLYL TSPSRFVRPVRNISI S+ ++NI+LIGPFEQV
Sbjct: 643 SVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQV 702
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FMEIRCPDGGDGGRKSSFPATHEEIHPT MLSVVAN TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 703 FMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM 762
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDE+PTGTNAIVAVLAYTGYDMEDA
Sbjct: 763 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDA 822
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS---KLDSDGLPHV 653
MILNKSSVERGMFHGQIYQTET+DLTEQG RSD SSRMFRKSNIEKS +DSDGLPHV
Sbjct: 823 MILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHV 882
Query: 654 GQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNP 713
GQMIRPDEPYCSIYN TSS HTLK+KGSE VYVDYVA DVKNKK LQKVNIRFRHPRNP
Sbjct: 883 GQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNP 942
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
VIGDKFSSRHGQKGVCSQLWPDVDMPF GTTGMRPDLIINPHAFPSRMTIAMLLESVAAK
Sbjct: 943 VIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 1002
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
GGSL GEFV+ATPFR SV KD+GES+ KSG L+DDLG +LREKGFNYHGLEVLYSGVYG
Sbjct: 1003 GGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGT 1062
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP FGEMERDSLL
Sbjct: 1063 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLL 1122
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVIC 952
AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLAT+FIQPQK P REIGGLPP +APKKV C
Sbjct: 1123 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTC 1182
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGA 992
HACQTSKGMETVAMPYVFRYLAAE AAMNIKMTLKL++GA
Sbjct: 1183 HACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGA 1222
>K7MME1_SOYBN (tr|K7MME1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1175
Score = 1752 bits (4538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1002 (84%), Positives = 912/1002 (91%), Gaps = 8/1002 (0%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS VRNSFS RREGYTDKA+VIRCVRADQSSL+V+LYYLRN SARLGFW++GREYLLPVG
Sbjct: 172 MSMVRNSFSDRREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVG 231
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
I+LKALIDT+D EI NL SCYNEKYEKGKGAVGTQ V +RA++I++E+R LSLFTRLQC
Sbjct: 232 IILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQC 291
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L YIGEHFQP++TELKNDSY VA+AVLKD + VHLD+NFDKFNLLIFMLQKLFSL+D T
Sbjct: 292 LEYIGEHFQPVITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQT 351
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
SV DNPDSLQN EVLLPGHLITLYLKEKLEDWLQ GK DE+ +KS FDFS+I VK
Sbjct: 352 SVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVK 411
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K DK + +ST++ENMLKTGRLVT TGLDLQQRAGYTVQA+RLN+LRF+SHFRAVHRG
Sbjct: 412 KVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRG 471
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT RITS+FDSQG++KDYFK
Sbjct: 472 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFK 531
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
IK+SIL++L++ GMT +PK+ LPGPPE LTVLLDGC+VGCI S E EK+VAHIRELKVS
Sbjct: 532 IKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVS 591
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
S+A+IPDD+EVGYVPLSMGGAYPGLYL TSPSRFVRPVRNISI SN ++NI+ IGPFEQV
Sbjct: 592 SAAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQV 651
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FMEIRCPDGGDGGRKSSFPATHEEIHPT MLSVVAN TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 652 FMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM 711
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDE+PTGTNAIVAVLAYTGYDMEDA
Sbjct: 712 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDA 771
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS---KLDSDGLPHV 653
MILNKSSVERGMFHGQIYQTET+DLTEQG R D SSRMFRKSN+EKS +DSDGLPHV
Sbjct: 772 MILNKSSVERGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHV 831
Query: 654 GQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNP 713
GQMIRPDEPYCSIYN TSS HTLK+KGSE VYVDYVAVDVKNKK LQKVNIRFRHPRNP
Sbjct: 832 GQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNP 891
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
VIGDKFSSRHGQKGVCSQLWPDVDMPF G TGMRPDLIINPHAFPSRMTIAMLLESVAAK
Sbjct: 892 VIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAK 951
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEK-SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
GGSL GEFV+ATPFR SVKKD+GES+ SG ++DDLG +LREKGFNYHGLEVLYSGVYG
Sbjct: 952 GGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGT 1011
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP FGEMERDSLL
Sbjct: 1012 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLL 1071
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVIC 952
AHGAAYLLHDRLHTCSDYHIADVCSLCGSML T+F QPQK P REIGGLPP +APKKV C
Sbjct: 1072 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTC 1131
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGASA 994
HACQTSKGMETVAMPYVFRYLAAE AAMNIKMTLKL++GA A
Sbjct: 1132 HACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGA 1173
>F6HVC4_VITVI (tr|F6HVC4) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_13s0084g00600 PE=3 SV=1
Length = 1135
Score = 1609 bits (4167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1002 (76%), Positives = 868/1002 (86%), Gaps = 9/1002 (0%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS VRNSF RREGYTDKAVVIRCVR DQS++TVKLYYLRN SARLGFW++GREYLLPVG
Sbjct: 135 MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+VLKALIDT+D EI +L CY+EKYE GKGAVGTQ V +R ++I++EVR LSLFTR QC
Sbjct: 195 VVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQC 254
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L +IGEHFQ ++ L+N+SY VA AVL++Y+FVHLD+N+DKFNLLIFM+QKLFSL+D T
Sbjct: 255 LQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQT 314
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
SV DNPD LQNQEVLLPGHLIT+YLKEKL++WL + DE+ ++ F+FS + VK
Sbjct: 315 SVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVK 373
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K DK P+R IS ++ENMLKTGRLVT +GLDLQQRAG TVQA+RLN+LRFLSHFRAVHRG
Sbjct: 374 KVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRG 433
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
ASFAGLRTT+VRKLLPE+WGFLCPVHTPDGEPCGLLNHM TCRITSYFDS+G+ +D+FK
Sbjct: 434 ASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFK 493
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
I++SIL +L+ GMT +PKL+ GPPEVL+V+LDG +VG IPS EVE V H+R LKVS
Sbjct: 494 IRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVS 553
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+ ++IPDDLEVGY+PLSMGGAYPGLYLFTSPSRFVRPVRNISI S E +I+LIGPFEQV
Sbjct: 554 AISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQV 613
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
+MEIRCPDG DGGR++ FPATHEEIHPTGMLSVVA+ TPWSDHNQSPRNMYQCQM KQTM
Sbjct: 614 YMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTM 673
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
AFSSQ I RADQKLYHLQTPQTPIVRTS Y KY++DE+PTGTNAIVAVLAY+GYDMEDA
Sbjct: 674 AFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDA 733
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHV 653
MILNKSSV+RG+ HGQIYQTET+DL+++ ++SD RMFR+SN++KS +DSDGLP+V
Sbjct: 734 MILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYV 793
Query: 654 GQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNP 713
GQMI P+EPYCSIYN TSST K KGSEPV VDYVA+D KNKK QKVNIRFR PRNP
Sbjct: 794 GQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNP 853
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLESVAAK
Sbjct: 854 IIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAK 913
Query: 774 GGSLHGEFVNATPFRGSVKKDNGES-EKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
GGSLHG+FV+ATPF S++K NGE+ +S L+D+LG ML GFNYHG+EVLYSG YG
Sbjct: 914 GGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGT 973
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQP FGEMERDS+L
Sbjct: 974 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSML 1033
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVIC 952
AHGAAYLLHDRLHTCSD+HIADVCSLCGS+L TS IQPQK REIGGLPP +APKKV C
Sbjct: 1034 AHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTC 1093
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGASA 994
HACQTSKGMETV+MPY+FR+LAAE AAMNIKMTL+L+NGA A
Sbjct: 1094 HACQTSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1135
>B9SVH7_RICCO (tr|B9SVH7) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_1264750 PE=3 SV=1
Length = 1159
Score = 1609 bits (4167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 765/1006 (76%), Positives = 869/1006 (86%), Gaps = 14/1006 (1%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVR------ADQSSLTVKLYYLRNDSARLGFWVKGRE 54
MSTVR SF RREGYTDKAVVIRCVR DQSS++VKLYYLR+ SARLGFW++GRE
Sbjct: 152 MSTVRGSFRDRREGYTDKAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGRE 211
Query: 55 YLLPVGIVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSL 114
YLLP GIVLKAL +T+D EI L CY+EKYEK KGAVG+Q V +RA++I++EVR LSL
Sbjct: 212 YLLPAGIVLKALAETTDREIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSL 271
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLF 174
FT+ +CL +IGEHFQP++ L+ +++ VA AVLKDY+FVHL++ DKFNLLIFMLQKLF
Sbjct: 272 FTQSECLRHIGEHFQPVMDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLF 331
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR---KSGTFDFSE 231
SLVD TSV+DNPDSLQNQEVLLPGHL+T+YLKEKLE+WL+ K ++ K+ F+F
Sbjct: 332 SLVDQTSVVDNPDSLQNQEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNNNFNFLS 391
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
+ VKK DK P+ IS ++ENMLKTGRLVT TGLDLQQRAGYTVQA+RLN+LRFLS FR
Sbjct: 392 VLDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFR 451
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
AVHRGASFAGLRTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT +CRITSYFDSQG++
Sbjct: 452 AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAV 511
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIR 411
KD+F I+ SIL +L GMT +PKL+ GPP+VL+VLLDG +VG IPS +VEK+V H+R
Sbjct: 512 KDFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLR 571
Query: 412 ELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
LKV++S++IPDDLEVGYVPLSMGGA+PGLYLFTSPSRF+RPV+NISI + E +NI+LIG
Sbjct: 572 RLKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIG 631
Query: 472 PFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
PFEQVFMEIRCPDGG+GGR +FPATHEEIHPT MLSVVAN TPWSDHNQSPRNMYQCQM
Sbjct: 632 PFEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQM 691
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
AKQTMAFS Q+++ RADQKLYHLQTPQTPIVRTS+YTKY +DEYPTGTNAIVAVLAYTGY
Sbjct: 692 AKQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGY 751
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---SKLDSD 648
DMEDAMILNKSSVERGM HGQIYQTET+DL+E+GSRSD + RMFR+SNI+K S +DSD
Sbjct: 752 DMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSD 811
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFR 708
GLP+VGQMI P+EPYCSIYN T++T T +KGS+PV VDYVA+D KNKK LQKVNIRFR
Sbjct: 812 GLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHLQKVNIRFR 871
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
HPRNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLE
Sbjct: 872 HPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLE 931
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEK--SGLLLDDLGQMLREKGFNYHGLEVLY 826
S+AAKGGSL+G+FV+ATPF SVK NG K S L+DDLG MLR GFNYHG+EVLY
Sbjct: 932 SLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLY 991
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SGVYG ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQP FGEM
Sbjct: 992 SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEM 1051
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD++LAHGAAYLLHDRLHTCSDYHIADVCSLCGS+L TSFIQ QK R+IGGLPP A
Sbjct: 1052 ERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIGGLPPVGA 1111
Query: 947 PKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGA 992
PKKV CH+CQTSKGMETVAMPYVFRYLAAE AAMNIKM ++L+ GA
Sbjct: 1112 PKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNIKMNVQLSGGA 1157
>M5XL01_PRUPE (tr|M5XL01) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa020507mg PE=4 SV=1
Length = 1037
Score = 1498 bits (3878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/992 (72%), Positives = 830/992 (83%), Gaps = 18/992 (1%)
Query: 15 YTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLKALIDTSDLEI 74
Y + C R DQSS+TVKLYYLRNDSARLGFW++GREYLLPVG+VLKALIDT+D EI
Sbjct: 50 YFGGRTIAWCAREDQSSVTVKLYYLRNDSARLGFWIQGREYLLPVGLVLKALIDTTDHEI 109
Query: 75 RTNLKSCYNEK--------YEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYIGE 126
NL CY EK YEKGKG VGTQ V +RA +I++EVR TR QCL +IG
Sbjct: 110 YKNLTCCYVEKDESCDVKKYEKGKGNVGTQLVGERAHIILDEVR--DFITRRQCLEHIGG 167
Query: 127 HFQPILTELKNDS-YDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLDN 185
HF+P++ L+++S V +AVL+DY+FVHLD FDKFNLLIFM+QKLFSL+D TS+ DN
Sbjct: 168 HFRPLMRGLEDESDLSVVGEAVLEDYIFVHLDKGFDKFNLLIFMVQKLFSLMDQTSLPDN 227
Query: 186 PDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKKCFDK 241
PD+LQN EVLLPGHLIT+YLKEKLEDWLQ K D++ KS TFDF + VKK DK
Sbjct: 228 PDALQNHEVLLPGHLITIYLKEKLEDWLQRAKKLLQDQINNKSKTFDFCSLVNVKKVLDK 287
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
P++ IS ++ENMLKTGRLVT +GLDLQQRAG TVQA+RLNYLR+LSHFRAVHRGASFAG
Sbjct: 288 NPSKHISLAVENMLKTGRLVTQSGLDLQQRAGLTVQAERLNYLRYLSHFRAVHRGASFAG 347
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISI 361
LRTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT TCRITSYFD+QG+I+++ I+ SI
Sbjct: 348 LRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSYFDAQGNIRNFLNIRESI 407
Query: 362 LDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMI 421
L +L + M VPKL+ GPP L+VLLDGC+VG I S VEK+VA +R+LKVS+S++I
Sbjct: 408 LTVLSELQMISSVPKLVQAGPPANLSVLLDGCVVGSISSKVVEKVVAQLRKLKVSASSVI 467
Query: 422 PDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIR 481
PDDLEVGYVPLS GAYPGLYLFTSPSRFVRPV+NISI S+E +NI+LIGPFEQVFMEIR
Sbjct: 468 PDDLEVGYVPLSSRGAYPGLYLFTSPSRFVRPVKNISIPSDEGQNIELIGPFEQVFMEIR 527
Query: 482 CPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQ 541
CPDG DGGRK +FPATHEEIHPTGMLSVVA+ TPWSDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 528 CPDGRDGGRKDAFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 587
Query: 542 TIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNK 601
+ +RADQKLYHL+TPQ+PIVRTS Y KY IDEYPTGTNAIVAVL+YTGYDMEDAMILNK
Sbjct: 588 ALCNRADQKLYHLKTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLSYTGYDMEDAMILNK 647
Query: 602 SSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-SKLDSDGLPHVGQMIRPD 660
SSV+RGMFHG IYQTET+DL++Q SRSD S + FR+SNI K S +DSDGLP+VGQ I+P+
Sbjct: 648 SSVDRGMFHGLIYQTETIDLSDQKSRSDRSRKFFRRSNINKNSSIDSDGLPYVGQTIKPN 707
Query: 661 EPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVIGDKFS 720
E SI+N T+ + ++K KGSEPV VDYVA+D KK LQK +IRFRHPRNP+IGDKFS
Sbjct: 708 EELYSIHNEVTNESRSIKHKGSEPVIVDYVAID--GKKLLQKASIRFRHPRNPIIGDKFS 765
Query: 721 SRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGE 780
SRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHG+
Sbjct: 766 SRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGK 825
Query: 781 FVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFI 840
+V+ATPF S + +S L+D+LG+ML+ KGFNYHG EV+YSGVYG ELTCEIF+
Sbjct: 826 YVDATPFANSKNVNEETPPQSKTLVDELGEMLKVKGFNYHGTEVMYSGVYGTELTCEIFM 885
Query: 841 GPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLL 900
GPVYYQRLRHMVSDK+QVRSTGT+DQ+T QP FGEMERDS+LAHGAAYLL
Sbjct: 886 GPVYYQRLRHMVSDKYQVRSTGTIDQITHQPIKGRKRGGGIRFGEMERDSMLAHGAAYLL 945
Query: 901 HDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKG 960
HDRLHTCSDYHIADVCS+CGS+L TSF++P++ R + GLPP +A KKVICHACQTS+G
Sbjct: 946 HDRLHTCSDYHIADVCSICGSILTTSFVKPERRVGRAVKGLPPIRASKKVICHACQTSRG 1005
Query: 961 METVAMPYVFRYLAAEFAAMNIKMTLKLNNGA 992
METVAMPYVF+YLAAE AAMNIK+TL+LNN A
Sbjct: 1006 METVAMPYVFKYLAAELAAMNIKLTLQLNNAA 1037
>K4AY64_SOLLC (tr|K4AY64) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc01g086710.2 PE=3 SV=1
Length = 1096
Score = 1485 bits (3845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/1000 (72%), Positives = 833/1000 (83%), Gaps = 10/1000 (1%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S RNSF RREGY+DKAVVIRCVR DQS++++KLYYL N SARLGFW++GREYLLPVGI
Sbjct: 100 SMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGI 159
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
+LKAL+DT+D EI NL CYNE+ ++ KG+VGTQ V +RA++I++EV+ LSLFTR QCL
Sbjct: 160 ILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCL 219
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
+IGEHFQP++ ++NDSY TVA AVL+DY+FVHLD+N DKFNLLIFMLQKLFSL+D TS
Sbjct: 220 RHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTS 279
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL----QSGKDEMKRKSGTFDFSEIFVVKK 237
VLDNPDSLQNQEVLLPGHLIT+YLKEKL+DWL +S ++E + F+ S + VKK
Sbjct: 280 VLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKK 339
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+K + I +IE+MLKTGRL T +GLDLQQRAG TVQA++LN+LRFLSHFRAVHRGA
Sbjct: 340 AIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGA 399
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFAGLRTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT +CRITSY+DS+G++KD+FK+
Sbjct: 400 SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKM 459
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
++SIL++L+ GMT PKL+ GPPE+L+VLLDG I G IPS +EK V H+R LK+SS
Sbjct: 460 RMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSS 519
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
++ IP DLEVGY+PLSM GAYPGLYLFTSPSRFVRPVRNIS + E +++LIGPFEQV+
Sbjct: 520 TSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVY 579
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
MEI CPDGGDGGRK+ FPATH EIHPT +LSVV N TPWSDHNQSPRNMYQCQM KQTM
Sbjct: 580 MEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMG 639
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
FSSQ + RADQKLYHLQTPQTPIVRT Y KY +D+YP GTNAIVAVLAY+GYDMEDAM
Sbjct: 640 FSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAM 699
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHVG 654
+LNKSSV+RGM HG IYQTET+DLTEQ ++SD + R+FR+SN++KS +DSDGLP+VG
Sbjct: 700 VLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVG 759
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPV 714
Q I P+EPYCSIYN TS T +K KGSEPV VDYVAVDVKNK LQK NIRFR RNPV
Sbjct: 760 QRINPNEPYCSIYNEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPV 819
Query: 715 IGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 774
IGDKFSSRHGQKGVCSQLWPDVDMPF TGMRPDLIINPHAFPSRMTIAMLLES+AAKG
Sbjct: 820 IGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG 879
Query: 775 GSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKEL 834
G+LHG+FV+ATPF ++K+ +S L+DDLG ML GFN+HG EVLYSGVYG EL
Sbjct: 880 GALHGKFVDATPFSNTMKE---SESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTEL 936
Query: 835 TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAH 894
TC IFIGPVYYQRLRHMVSDKFQVRSTG VD +TRQP FGEMERDSLLAH
Sbjct: 937 TCRIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAH 996
Query: 895 GAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHA 954
GA+YLLHDRLHT SD+HIADVCS CGS+L +S IQP K + I P + PKKV C A
Sbjct: 997 GASYLLHDRLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKVTCVA 1056
Query: 955 CQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGASA 994
C++SKGMETVAMPYVF+YLAAE AAMNIKMTLKL+N A A
Sbjct: 1057 CRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEAGA 1096
>B9GLY1_POPTR (tr|B9GLY1) DNA-directed RNA polymerase (Fragment) OS=Populus
trichocarpa GN=POPTRDRAFT_178400 PE=3 SV=1
Length = 1109
Score = 1475 bits (3819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/1005 (71%), Positives = 833/1005 (82%), Gaps = 32/1005 (3%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVR------ADQSSLTVKLYYLRNDSARLGFWVKGRE 54
MS R S+ +RREG+TDKAVVIRCVR D SS+TV+LYYLRN SAR+GFWV+GRE
Sbjct: 122 MSMTRGSYRERREGHTDKAVVIRCVREYQSSLTDHSSVTVRLYYLRNGSARVGFWVRGRE 181
Query: 55 YLLPVGIVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSL 114
YLLPVGIVLKAL++T+D EI NL S Y+EKYE+ KGAVG+Q + +RA++I++EVR +L
Sbjct: 182 YLLPVGIVLKALVETTDREIYENLTSYYDEKYEEVKGAVGSQLLGERAKIILDEVRVAAL 241
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLF 174
FT+ CL +IG H I + TVA AVLKDYVFVHL + DKF+LLIFMLQKLF
Sbjct: 242 FTQDDCLQHIGTH-NCISISI------TVAHAVLKDYVFVHLPNFHDKFSLLIFMLQKLF 294
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFS 230
S VD TS DNPDSLQNQ++LLPGHL+T+YLKEKLEDWL+ K DE+ K+ TF+F
Sbjct: 295 SFVDHTSAPDNPDSLQNQDILLPGHLMTIYLKEKLEDWLRKAKSLVQDELT-KNNTFNFL 353
Query: 231 EIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
+ V+K DK +ST++E+ML++GRL T TGLDLQQRAGYTVQA+RLNYLRFLS F
Sbjct: 354 AVGDVRKVMDKNSPVTVSTAVESMLRSGRLATQTGLDLQQRAGYTVQAERLNYLRFLSFF 413
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
RAVHRGASFAG RTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMTC+CR+TSYFDSQG
Sbjct: 414 RAVHRGASFAGGRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCSCRVTSYFDSQGV 473
Query: 351 IKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHI 410
+KD+F I+ SIL +L GM +PKL+ GPP+ L+VLLDG ++G +PS E+EK++AH+
Sbjct: 474 VKDFFDIRKSILGVLTSLGMIASLPKLVQAGPPKALSVLLDGRVIGSLPSSEIEKVIAHL 533
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R LKVS+++ IPDD+EVGYVPLS+GGAYPGLY+ T PSRF+RPVRNISI E ++I+LI
Sbjct: 534 RRLKVSATSAIPDDMEVGYVPLSIGGAYPGLYISTYPSRFIRPVRNISIPCEERQDIELI 593
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
GPFEQV E + +FPATHEEIHPT MLSVVAN TPWSDHNQSPRNMYQCQ
Sbjct: 594 GPFEQVSTEFSFLN--------AFPATHEEIHPTNMLSVVANLTPWSDHNQSPRNMYQCQ 645
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
MAKQTMAFS Q+++ RADQK+YHLQTPQTPIVRT YTKY+IDE+PTGTNAIVAVLAYTG
Sbjct: 646 MAKQTMAFSLQSLRFRADQKIYHLQTPQTPIVRTGAYTKYSIDEHPTGTNAIVAVLAYTG 705
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDS 647
YDMEDAMILNKSSV+RGMFHGQIYQTET+DL+++GSRSD S R FR+SN ++S +DS
Sbjct: 706 YDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDEGSRSDRSHRRFRRSNTDRSSHSLIDS 765
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRF 707
DGLP+VGQ+I P+EPYCSIYN T+++ +KGSEP VDYVAVD K+KK LQKVNIRF
Sbjct: 766 DGLPYVGQIINPNEPYCSIYNDITNTSKPKYRKGSEPAIVDYVAVDTKSKKHLQKVNIRF 825
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
RHPRNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLL
Sbjct: 826 RHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLL 885
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS--GLLLDDLGQMLREKGFNYHGLEVL 825
ES+AAKGGSL+G FV+ATPF +V+ N KS L+D+LG+ML+ KGFN+HG+EVL
Sbjct: 886 ESLAAKGGSLNGNFVDATPFASTVRASNAGEAKSEPESLVDELGKMLKSKGFNHHGVEVL 945
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSGVYG ELTCEIFIGPVYYQRLRHMVSDKFQVRSTG VDQ+TRQP FGE
Sbjct: 946 YSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGPVDQITRQPIKGRKRGGGIRFGE 1005
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERDS+LAHGAAYLLHDRLHTCSDYHIADVCS+CGS+L T + QPQ+ R+IGGLPP K
Sbjct: 1006 MERDSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILTTHY-QPQRRIVRDIGGLPPVK 1064
Query: 946 APKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
APKKV+CHACQTSKG+ETVAMPYVFRYLAAE AAMNIKMTL LN+
Sbjct: 1065 APKKVVCHACQTSKGIETVAMPYVFRYLAAELAAMNIKMTLHLND 1109
>D7KEN3_ARALL (tr|D7KEN3) DNA-directed RNA polymerase OS=Arabidopsis lyrata subsp.
lyrata GN=ARALYDRAFT_313639 PE=3 SV=1
Length = 1188
Score = 1468 bits (3801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/1002 (69%), Positives = 832/1002 (83%), Gaps = 12/1002 (1%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +RNSF R+EGYT+KAVV RCVR DQSS+TVKLYYLRN SAR+GFW+ GREYLLPVG+
Sbjct: 186 SMIRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGL 245
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
VLKAL +T D EI +L CY+E Y +G GA+GTQ + +RA++I++EVR L LFTR QC
Sbjct: 246 VLKALTNTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCR 305
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
++G+HFQP+L L+ +S+ VA+AVL+DY+FVHLD++ DKFNLLIF++QKL+SLVD TS
Sbjct: 306 KHLGQHFQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTS 365
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKK 237
+ DNPDSLQNQE+L+PGH+IT+YLKEKLEDWL+ K DE+ S F F + VKK
Sbjct: 366 LPDNPDSLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKK 425
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+K P R+I TSIE +LKTG L T +GLDLQQRAGYTVQA+RLN+LRFLS FRAVHRGA
Sbjct: 426 LINKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA 485
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNHMTCT RITS FDS+G+I+D+ KI
Sbjct: 486 SFAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKI 545
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+ S++++L +GM +PKL+ GPP+V+ VLLDG +VG + S V K+V+++R LKV +
Sbjct: 546 RKSVVEVLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEA 605
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
++IP+DLEVGYVP+SMGG+YPGLYL + P+RF+RPV+NISI S +NI+LIGPFEQVF
Sbjct: 606 PSVIPEDLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPS---ENIELIGPFEQVF 662
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
MEI CPDGG+GGR +S PATHEEIHPTGM+SVVAN TPWSDHNQSPRNMYQCQMAKQTMA
Sbjct: 663 MEISCPDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA 722
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
+S+Q +Q RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVLA+TG+DMEDAM
Sbjct: 723 YSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAM 782
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---SKLDSDGLPHVG 654
ILNKSSVERGM HGQIYQTE +DL++Q SR D + FR+S +K S++D+DGLP+VG
Sbjct: 783 ILNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVG 842
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPV 714
Q I PDEPYC IY+ T +K KG++PV VD+V+VD+K+KK QK NIRFRH RNP+
Sbjct: 843 QKIYPDEPYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPI 902
Query: 715 IGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 774
IGDKFSSRHGQKGVCSQLWPD++MPF G TGMRPDLIINPHAFPSRMTIAMLLES+AAKG
Sbjct: 903 IGDKFSSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG 962
Query: 775 GSLHGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
GSLHG+FV+ATPFR +VKK NGE E KS LL+DDLG ML+EKGFNY+G E LYSG G E
Sbjct: 963 GSLHGKFVDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVE 1022
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
L CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP FGEMERDSLLA
Sbjct: 1023 LKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLA 1082
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG-LPPRKAPKKVIC 952
HGA+YLLHDRLHT SD+HIADVCSLCGS+L +S + Q+ ++ G LPP + PKKV C
Sbjct: 1083 HGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTC 1142
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGASA 994
H+C TSKGMETVAMPYVFRYLAAE A+MNIKMTL+L++ A
Sbjct: 1143 HSCGTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSDRGVA 1184
>F4I366_ARATH (tr|F4I366) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=NRPA2 PE=2 SV=1
Length = 1178
Score = 1459 bits (3778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/997 (69%), Positives = 830/997 (83%), Gaps = 11/997 (1%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +RNSF R+EGY+ KAVV RCVR DQSS+TVKLYYLRN SAR+GFW+ GREYLLPVG+
Sbjct: 179 SMIRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGL 238
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
VLKAL ++ D EI +L CY+E Y +G GA+GTQ V +RA++I++EVR L LFTR QC
Sbjct: 239 VLKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCR 298
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
++G+HFQP+L +K +S VA+AVL+DY+FVHLD++ DKFNLLIF++QKL+SLVD TS
Sbjct: 299 KHLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTS 358
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKK 237
+ DNPDSLQNQE+L+PGH+IT+YLKEKLE+WL+ K DE+ + F F + VKK
Sbjct: 359 LPDNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKK 418
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+K P R+I TSIE +LKTG L T +GLDLQQRAGYTVQA+RLN+LRFLS FRAVHRGA
Sbjct: 419 LINKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA 478
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNHMT T RITS FDS+G+I+D+ KI
Sbjct: 479 SFAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKI 538
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+ S++D+L +GM +PKL+ GPP+V+ VLLDG +VG + S V K+V++IR LKV +
Sbjct: 539 RKSVVDVLTGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEA 598
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
++IP+DLEVGYVP SMGG+YPGLYL + P+RF+RPV+NISI S+ NI+LIGPFEQVF
Sbjct: 599 PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVF 655
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
MEI CPDGG+GGR +S ATHEEIHPTGM+SVVAN TPWSDHNQSPRNMYQCQMAKQTMA
Sbjct: 656 MEISCPDGGNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA 715
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
+S+Q +Q RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVLA+TG+DMEDAM
Sbjct: 716 YSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAM 775
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSN--IEKSKLDSDGLPHVGQ 655
ILNKSSVERGM HGQIYQTE +DL++Q SR D S+ FR+S E ++D+DGLP VGQ
Sbjct: 776 ILNKSSVERGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRSTNKAEHFRIDADGLPSVGQ 835
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVI 715
+ PDEPYCSIY+ T+ T +K+KG++PV VD+V+VD+K+KK Q+ NIRFRH RNP+I
Sbjct: 836 KLYPDEPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHPQRANIRFRHARNPII 895
Query: 716 GDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGG 775
GDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG
Sbjct: 896 GDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGG 955
Query: 776 SLHGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKEL 834
SLHG+FV+ATPFR +VKK NGE E KS LL+DDLG ML+EKGFN++G E LYSG G EL
Sbjct: 956 SLHGKFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVEL 1015
Query: 835 TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAH 894
CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP FGEMERDSLLAH
Sbjct: 1016 KCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAH 1075
Query: 895 GAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQ-PQKLPRREIGGLPPRKAPKKVICH 953
GA+YLLHDRLHT SD+HIADVCSLCGS+L +S + QK +EIG LPP + PKKV C+
Sbjct: 1076 GASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCY 1135
Query: 954 ACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+C+TSKGMETVAMPYVFRYLAAE A+MNIKMTL+L++
Sbjct: 1136 SCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 1172
>R0ILS1_9BRAS (tr|R0ILS1) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10008127mg PE=4 SV=1
Length = 1171
Score = 1454 bits (3765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/1001 (69%), Positives = 833/1001 (83%), Gaps = 16/1001 (1%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +RNSF RREGY+DKAV IRCVR DQSS+TVKLYYLRN SAR+GFW+ GREYLLPVG+
Sbjct: 164 SMIRNSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGL 223
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
VLKAL T+D E+ +L CYNE Y +G GA+GTQ V +RA++I++EVR + LFTR QC
Sbjct: 224 VLKALTKTNDEEVYKSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCR 283
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
++GEHFQP+L L+ +SY TVA+AVL+DY+FVHLD++ DKFNLLIF++QKL+SLVD TS
Sbjct: 284 KHLGEHFQPVLDGLEKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTS 343
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRK------SGTFDFSEIFVV 235
+ DNPDSLQNQE+L+PGHLIT+YLKEKLE+WL+ K +K + F F + V
Sbjct: 344 LPDNPDSLQNQEILVPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADV 403
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
KK F+K P R++ SIE +LKTGR+ T +GLDLQQRAGYTVQA+RLN+LRFLS FRAVHR
Sbjct: 404 KKLFNKNPPRSVGMSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHR 463
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMT T RITS FDS+G+I+D+
Sbjct: 464 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFL 523
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
KI+ S++++L+ +GM +PKL+ PPEV+ VLLDG +VG + S V +V+++R LK+
Sbjct: 524 KIRKSVVEVLIGAGMVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKI 583
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ ++IP+DLEVGYVP SMGG+YPGLYL + P+RF+RPV+NISI S ++I+LIGPFEQ
Sbjct: 584 EAPSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPS---ESIELIGPFEQ 640
Query: 476 VFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
VFMEI CPDGG+GGR +S PATHEEIHPTGM+SVVAN TPWSDHNQSPRNMYQCQMAKQT
Sbjct: 641 VFMEISCPDGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQT 700
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
MA+S+Q +Q RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVLA+TG+DMED
Sbjct: 701 MAYSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMED 760
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPH 652
AMILNKSSVERGM HGQIYQTE +DL++Q SR D + FR+S +KS +D+DGLP+
Sbjct: 761 AMILNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPY 820
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRN 712
VGQ I PDEPY SIY+ T+ T+K+KG++PV VD+V+VD+K+KK QK NIRFRH RN
Sbjct: 821 VGQKIYPDEPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARN 880
Query: 713 PVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAA 772
P+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLES+AA
Sbjct: 881 PIIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAA 940
Query: 773 KGGSLHGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYG 831
KGGSLHG+FV+ATPFR +V NGE + KS LL+DDLG ML+EKGFNY+G E LYSG+ G
Sbjct: 941 KGGSLHGKFVDATPFRNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILG 1000
Query: 832 KELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSL 891
EL CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP FGEMERDSL
Sbjct: 1001 VELECEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSL 1060
Query: 892 LAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--IQPQKLPRREIGGLPPRKAPKK 949
LAHGA+YLLHDRLHT SD+HIADVCSLCGS+L +S +Q +KL + G LPP + PKK
Sbjct: 1061 LAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSIANVQQKKLI-QVTGKLPPGRTPKK 1119
Query: 950 VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
V C++C+TSKGMETVAMPYVFRYLAAE A+MNIKMTLKL++
Sbjct: 1120 VTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLKLSD 1160
>Q9FXG4_ARATH (tr|Q9FXG4) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=F1N18.2 PE=3 SV=1
Length = 1233
Score = 1424 bits (3687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/1025 (67%), Positives = 823/1025 (80%), Gaps = 44/1025 (4%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +RNSF R+EGY+ KAVV RCVR DQSS+TVKLYYLRN SAR+GFW+ GREYLLPVG+
Sbjct: 211 SMIRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGL 270
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
VLKAL ++ D EI +L CY+E Y +G GA+GTQ V +RA++I++EVR L LFTR QC
Sbjct: 271 VLKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCR 330
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
++G+HFQP+L +K +S VA+AVL+DY+FVHLD++ DKFNLLIF++QKL+SLVD TS
Sbjct: 331 KHLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTS 390
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKK 237
+ DNPDSLQNQE+L+PGH+IT+YLKEKLE+WL+ K DE+ + F F +
Sbjct: 391 LPDNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESRKSLLI 450
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F I TSIE +LKTG L T +GLDLQQRAGYTVQA+RLN+LRFLS FRAVHRGA
Sbjct: 451 LFS-----LIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA 505
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNHMT T RITS FDS+G+I+D+ KI
Sbjct: 506 SFAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKI 565
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+ S++D+L +GM +PKL+ GPP+V+ VLLDG +VG + S V K+V++IR LKV +
Sbjct: 566 RKSVVDVLTGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEA 625
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV- 476
++IP+DLEVGYVP SMGG+YPGLYL + P+RF+RPV+NISI S+ NI+LIGPFEQV
Sbjct: 626 PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVA 682
Query: 477 ---------------------------FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSV 509
FMEI CPDGG+GGR +S ATHEEIHPTGM+SV
Sbjct: 683 NPINIIFISTFPGIQSNEKKKILPNQVFMEISCPDGGNGGRNNSSLATHEEIHPTGMISV 742
Query: 510 VANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTK 569
VAN TPWSDHNQSPRNMYQCQMAKQTMA+S+Q +Q RADQK+YHLQTPQ+P+VRT TYT
Sbjct: 743 VANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIYHLQTPQSPVVRTKTYTT 802
Query: 570 YNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSD 629
Y+IDE PTGTNAIVAVLA+TG+DMEDAMILNKSSVERGM HGQIYQTE +DL++Q SR D
Sbjct: 803 YSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHGQIYQTENIDLSDQNSRFD 862
Query: 630 PSSRMFRKSN--IEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYV 687
S+ FR+S E ++D+DGLP VGQ + PDEPYCSIY+ T+ T +K+KG++PV V
Sbjct: 863 SGSKSFRRSTNKAEHFRIDADGLPSVGQKLYPDEPYCSIYDEVTNKTRHMKRKGTDPVIV 922
Query: 688 DYVAVDVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMR 747
D+V+VD+K+KK Q+ NIRFRH RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMR
Sbjct: 923 DFVSVDMKSKKHPQRANIRFRHARNPIIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMR 982
Query: 748 PDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE-KSGLLLD 806
PDLIINPHAFPSRMTIAMLLES+AAKGGSLHG+FV+ATPFR +VKK NGE E KS LL+D
Sbjct: 983 PDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRDAVKKTNGEEESKSSLLVD 1042
Query: 807 DLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 866
DLG ML+EKGFN++G E LYSG G EL CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ
Sbjct: 1043 DLGSMLKEKGFNHYGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQ 1102
Query: 867 VTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATS 926
+T QP FGEMERDSLLAHGA+YLLHDRLHT SD+HIADVCSLCGS+L +S
Sbjct: 1103 LTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSS 1162
Query: 927 FIQ-PQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMT 985
+ QK +EIG LPP + PKKV C++C+TSKGMETVAMPYVFRYLAAE A+MNIKMT
Sbjct: 1163 VVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMT 1222
Query: 986 LKLNN 990
L+L++
Sbjct: 1223 LQLSD 1227
>Q9C8S4_ARATH (tr|Q9C8S4) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=T1P2.15 PE=2 SV=1
Length = 1114
Score = 1420 bits (3676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/997 (68%), Positives = 817/997 (81%), Gaps = 25/997 (2%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +RNSF R+EGY+ KAVV RCVR DQSS+TVKLYYLRN SAR+GFW+ GREYLLPVG+
Sbjct: 129 SMIRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGL 188
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
VLKAL ++ D EI +L CY+E Y +G GA+GTQ V +RA++I++EVR L LFTR QC
Sbjct: 189 VLKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCR 248
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
++G+HFQP+L D VA+AVL+DY+FVHLD++ DKFNLLIF++QKL+SLVD TS
Sbjct: 249 KHLGQHFQPVL--------DGVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTS 300
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKK 237
+ DNPDSLQNQE+L+PGH+IT+YLKEKLE+WL+ K DE+ + F F + VKK
Sbjct: 301 LPDNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKK 360
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+K P R+I TSIE +LKTG L T +GLDLQQRAGYTVQA+RLN+LRFLS FRAVHRGA
Sbjct: 361 LINKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA 420
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNHMT T RITS FDS+G+I+D+ KI
Sbjct: 421 SFAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKI 480
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+ S++D+L +GM +PKL+ GPP+V+ VLLDG +VG + S V K+V++IR LKV +
Sbjct: 481 RKSVVDVLTGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEA 540
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
++IP+DLEVGYVP SMGG+YPGLYL + P+RF+RPV+NISI S+ NI+LIGPFEQV
Sbjct: 541 PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVA 597
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
I S+FPATHEEIHPTGM+SVVAN TPWSDHNQSPRNMYQCQMAKQTMA
Sbjct: 598 NPINII------FISTFPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA 651
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
+S+Q +Q RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVLA+TG+DMEDAM
Sbjct: 652 YSTQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAM 711
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSN--IEKSKLDSDGLPHVGQ 655
ILNKSSVERGM HGQIYQTE +DL++Q SR D S+ FR+S E ++D+DGLP VGQ
Sbjct: 712 ILNKSSVERGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRSTNKAEHFRIDADGLPSVGQ 771
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVI 715
+ PDEPYCSIY+ T+ T +K+KG++PV VD+V+VD+K+KK Q+ NIRFRH RNP+I
Sbjct: 772 KLYPDEPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHPQRANIRFRHARNPII 831
Query: 716 GDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGG 775
GDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG
Sbjct: 832 GDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGG 891
Query: 776 SLHGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKEL 834
SLHG+FV+ATPFR +VKK NGE E KS LL+DDLG ML+EKGFN++G E LYSG G EL
Sbjct: 892 SLHGKFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVEL 951
Query: 835 TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAH 894
CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP FGEMERDSLLAH
Sbjct: 952 KCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAH 1011
Query: 895 GAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQ-PQKLPRREIGGLPPRKAPKKVICH 953
GA+YLLHDRLHT SD+HIADVCSLCGS+L +S + QK +EIG LPP + PKKV C+
Sbjct: 1012 GASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCY 1071
Query: 954 ACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+C+TSKGMETVAMPYVFRYLAAE A+MNIKMTL+L++
Sbjct: 1072 SCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 1108
>M0TSV1_MUSAM (tr|M0TSV1) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1174
Score = 1418 bits (3671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1002 (67%), Positives = 808/1002 (80%), Gaps = 9/1002 (0%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS VR SF R GY DKAVV+RCVR DQSS+T+KLYYL N SARLGFW++GRE+LLPVG
Sbjct: 172 MSMVRKSFRNRGPGYGDKAVVMRCVREDQSSVTLKLYYLENGSARLGFWIRGREFLLPVG 231
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
IVLKALIDT+D EI +L CYN++Y++ KGAV TQ + +RA++I++EVR LSL+TR QC
Sbjct: 232 IVLKALIDTNDHEIFVSLTCCYNDRYQREKGAVATQLIGERAQIILDEVRDLSLWTRSQC 291
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L +IGE+F+P + + +S+ TVA+AVL+DY+FVHL N DKFNLLIF+LQKL++LVD T
Sbjct: 292 LKHIGEYFRPAMNGFETESHTTVAEAVLRDYIFVHLASNHDKFNLLIFLLQKLYALVDQT 351
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
+ DNPD+LQNQE+LLPGHLIT+YLKE+L+DWL+ K DE +K D + VK
Sbjct: 352 AAPDNPDALQNQEILLPGHLITIYLKERLQDWLKKSKRQLLDETAKKEKNIDIKNLTQVK 411
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K F ++ A I +IE+MLK GRL T +GLDL QR G ++QA+RLN+ R+LSHFR+VHRG
Sbjct: 412 KFFSRSSA-TIGRAIESMLKIGRLNTASGLDLPQREGMSIQAERLNFFRYLSHFRSVHRG 470
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
ASFA +RTT+VRKLLPESWGFLCPV+TPDGEPCGLLNHMTC CR+ S++DS+G +KD+ K
Sbjct: 471 ASFAKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCACRVASFYDSEGRVKDFLK 530
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
I++SIL +LV GMT L+PKL GPPEVL VLLDGC+VG I S ++E+ VAHIR LK+S
Sbjct: 531 IRMSILSVLVGIGMTPLLPKLERAGPPEVLHVLLDGCVVGSISSVKIEEAVAHIRRLKLS 590
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP+DLEVGYVPLS GGAYPGLY+FT+ SRF+RPV N+ +++ +KNI+LIGPFEQ
Sbjct: 591 GICGIPEDLEVGYVPLSFGGAYPGLYMFTNSSRFIRPVINLIQVTDGSKNIELIGPFEQA 650
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FMEIRCPDGG+GGR+ FPATHEEIHPTG+LSVVAN TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 651 FMEIRCPDGGNGGRREFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTM 710
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
FS+Q +Q+RAD K YHLQTPQ+PIVRT++Y+KY +DE+PTGTNAIVAVLAYTGYDMEDA
Sbjct: 711 GFSAQALQYRADLKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDA 770
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE--KSKLDSDGLPHVG 654
MILNKSSV+RG+ G IYQTE++DL + + D +F +SN KS +DSDGLP+VG
Sbjct: 771 MILNKSSVDRGLCRGHIYQTESIDLANKHEKEDRLLEIFARSNDRKLKSSIDSDGLPYVG 830
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-LQKVNIRFRHPRNP 713
Q I P EP S YN TS T KGSE V +DYVAVD K+ LQKVNIR R R P
Sbjct: 831 QTIHPSEPLYSTYNTLTSITKPTLLKGSEDVIIDYVAVDGTGSKNYLQKVNIRTRRTRYP 890
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
+IGDKFSSRHGQKGVCSQ+WPDVDMPF TGMRPDLIINPHAFPSRMTI MLLES+AAK
Sbjct: 891 IIGDKFSSRHGQKGVCSQMWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAK 950
Query: 774 GGSLHGEFVNATPFRGSV-KKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
GGSLHG+FV+ATPF SV D + KS ++D+LG ML GFNYHG+EVLYSGVYG
Sbjct: 951 GGSLHGKFVDATPFSRSVCNADEDKPSKSSSVVDELGPMLTSYGFNYHGVEVLYSGVYGT 1010
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQP FGEMERD++L
Sbjct: 1011 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAVL 1070
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVIC 952
AHGAAYLLHDRLH+CSDYHIADVCS CGS+L + IQPQK REI GLPP + PK IC
Sbjct: 1071 AHGAAYLLHDRLHSCSDYHIADVCSYCGSVLTATAIQPQKRAVREIHGLPPARTPKNYIC 1130
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGASA 994
+C+T KGMETVAMPYVF+YLAAE AAMNIKM L+L+N A +
Sbjct: 1131 QSCKTGKGMETVAMPYVFKYLAAELAAMNIKMELQLSNQAGS 1172
>M4EN13_BRARP (tr|M4EN13) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra030183 PE=3 SV=1
Length = 1152
Score = 1416 bits (3666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/984 (68%), Positives = 813/984 (82%), Gaps = 12/984 (1%)
Query: 4 VRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
+RNSF+ +REGY+DKAV IRCVR DQS++T+K+YY RN SAR+GFW+ GRE+LLPVG+VL
Sbjct: 172 IRNSFTGKREGYSDKAVAIRCVRDDQSAVTIKVYYNRNGSARVGFWIGGREFLLPVGLVL 231
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KAL +T+D EI +L CYNE Y +G G+VGTQ V +RA++I++EVR L LFTR QC Y
Sbjct: 232 KALTETNDEEIYESLNCCYNEHYGRGDGSVGTQLVRERAKIILDEVRDLGLFTREQCRKY 291
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+GEHF+ + L+ +SY VA+AVLK+Y+FVHLD++ DKFNLLIF++QKLFSLVD TS+
Sbjct: 292 LGEHFKSDIDGLEKESYPVVAEAVLKNYIFVHLDNDDDKFNLLIFIIQKLFSLVDQTSLP 351
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKKCF 239
DNPDSLQNQE+L+PGHLIT+YLKEKLE+WL+ K +EM+ FDF +KK
Sbjct: 352 DNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSTIEEEMRNIKSKFDFENHADIKKLM 411
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+K R+I TSIE++LK+G + T + LDLQQ+ GYTVQA+RLN+LRFLS FRAVHRGASF
Sbjct: 412 NKNQPRSIGTSIESLLKSGCMTTRSSLDLQQKVGYTVQAERLNFLRFLSFFRAVHRGASF 471
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMT TCRI+S FDS G+I+D+ KI+
Sbjct: 472 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRISSQFDSNGNIRDFRKIRR 531
Query: 360 SILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSA 419
S++D+LV GM +PKL+ GPP+V+ VLLDG +VG + S V ++VA++R LKV + +
Sbjct: 532 SVVDVLVGVGMVTSLPKLVRAGPPKVIHVLLDGQVVGSLSSNLVPEVVAYLRRLKVEAPS 591
Query: 420 MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFME 479
+IP+DLEVGYVP SMGG+YPGLYL + P+RF+RPV+N SI SN N++LIGPFEQVFME
Sbjct: 592 IIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNTSIPSN---NLELIGPFEQVFME 648
Query: 480 IRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFS 539
I CPDGG+GGR +S ATHEEI PTGM+SVVAN TPWSDHNQSPRNMYQCQMAKQTMA+S
Sbjct: 649 ISCPDGGNGGRNNSSLATHEEIDPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYS 708
Query: 540 SQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMIL 599
+Q +Q RADQK+YHLQTPQ+P+VRT TYT YNIDE PTGTNAIVAVLA+TG+DMEDAMIL
Sbjct: 709 TQALQFRADQKIYHLQTPQSPVVRTKTYTAYNIDENPTGTNAIVAVLAHTGFDMEDAMIL 768
Query: 600 NKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHVGQM 656
NKSSVERGM HGQIYQTE +DL++Q SRS ++ FR++N KS +D+DGLP+VGQ
Sbjct: 769 NKSSVERGMCHGQIYQTEAIDLSDQKSRSGSGNKRFRRNNAVKSAHSCVDADGLPYVGQK 828
Query: 657 IRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVIG 716
I P+E YCSIY+ T+ +K+KG++PV VD+V++D+K+K QK NIRFRH RNP+IG
Sbjct: 829 IYPNETYCSIYDGVTNDYKPMKRKGTDPVIVDFVSLDMKSKNHPQKANIRFRHARNPIIG 888
Query: 717 DKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGS 776
DKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLES+AAKGGS
Sbjct: 889 DKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGS 948
Query: 777 LHGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELT 835
L GEFV+ATPFR +VKK NGE + KS LL+DDLG ML++KGFN++G E LYSG G EL
Sbjct: 949 LRGEFVDATPFRDAVKKTNGEEDSKSSLLVDDLGSMLKQKGFNHYGTETLYSGYLGVELK 1008
Query: 836 CEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHG 895
CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQVTRQP FGEMERDSLLAHG
Sbjct: 1009 CEIFMGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRRRGGGIRFGEMERDSLLAHG 1068
Query: 896 AAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQ-PQKLPRREIGGLPPRKAPKKVICHA 954
A+YLLHDRLHT SD+HIADVCSLCGS+L +S + QK REIG LPP + PKKV C +
Sbjct: 1069 ASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVLNVQQKKLIREIGNLPPGRTPKKVTCDS 1128
Query: 955 CQTSKGMETVAMPYVFRYLAAEFA 978
C+TSKGMETVAMPYVFRYLAAE A
Sbjct: 1129 CKTSKGMETVAMPYVFRYLAAELA 1152
>J3N3Q7_ORYBR (tr|J3N3Q7) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB10G21550 PE=3 SV=1
Length = 1161
Score = 1338 bits (3463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/999 (63%), Positives = 795/999 (79%), Gaps = 12/999 (1%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M +R +F R GYTD+AVVIRCV+ DQSS+T+KLYYL N SARLGFW+ RE+LLPVG
Sbjct: 156 MGLIRGAFVNRGAGYTDQAVVIRCVQDDQSSVTIKLYYLLNGSARLGFWLGAREFLLPVG 215
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
IVLKALIDTSD EI T+L CY++ Y GKG V T + DRA++I++EVR LSLFTR +C
Sbjct: 216 IVLKALIDTSDWEIFTSLTCCYSDHYRTGKGVVSTPLIADRAQIILDEVRVLSLFTRTEC 275
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L +IG++F+ ++ + D ++TVA+AVLKDY+FVHL +N DKFNLLIFMLQKL++LVD T
Sbjct: 276 LLHIGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYALVDQT 335
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEIFVVKK 237
+ DN D+LQ QE LLPGHLIT++LK++L+DWL+ K E K+ +FD S V++
Sbjct: 336 ASPDNADALQYQEALLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLSNSREVRR 395
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
KT ++ + +IE+M+K G++ + +GLDL QR G T+ A+RLN+ R++SHFR+VHRG+
Sbjct: 396 FLSKT-SQYVGRAIESMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGS 454
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFA +RTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT TCR++S+++S G+IKD+ KI
Sbjct: 455 SFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSFYNSGGAIKDFQKI 514
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
K+S++ LV +GM QL+P++ GPPEVL V LDGCIVG I + ++E++V ++R LK+ +
Sbjct: 515 KMSLIAHLVGAGMAQLLPRIERTGPPEVLHVHLDGCIVGSIAAAKIEEVVNYLRSLKLLA 574
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
+ IP+DLEVGYVPLS+GGAYPGLYLFT+P+RF+RPVR++ LS+ +I+LIGPFEQ F
Sbjct: 575 HSGIPEDLEVGYVPLSLGGAYPGLYLFTNPARFIRPVRSLLGLSDGGPSIELIGPFEQAF 634
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
MEIRCPDGGDGGRK FPATHEEIHPT +LSVVAN TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 635 MEIRCPDGGDGGRKELFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMG 694
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
F Q ++ R D K +HLQTPQTPIVRT+TY+KY +DE+P+GTNAIVAVL+YTGYDMEDAM
Sbjct: 695 FCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAM 754
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---SKLDSDGLPHVG 654
ILNKS+V+RGMF G IYQTE +DL+E+ D + F KSN+ + + +DSDGLP +G
Sbjct: 755 ILNKSAVDRGMFRGHIYQTECIDLSEKS--RDNAVEFFCKSNLLRDTTAVIDSDGLPCIG 812
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-LQKVNIRFRHPRNP 713
+ I P+E Y S+ N T +K KGSEP +DYVAV+ N K+ LQK N+R R RNP
Sbjct: 813 EKIFPNEQYYSVCNNLTGVVRPVKLKGSEPAAIDYVAVNGTNFKNRLQKANVRLRRVRNP 872
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 873 IIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAK 932
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
GSL G+F++ATPF SV+K + S S ++D+LG ML GFNYHG EVLYSGV+G E
Sbjct: 933 AGSLTGKFMDATPFSSSVEKRDENSCTSNSIVDELGPMLASYGFNYHGTEVLYSGVFGTE 992
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQ+TRQP FGEMERD++LA
Sbjct: 993 MNCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPVGGRKFGGGIRFGEMERDAVLA 1052
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI--QPQKLPRREIGGLPPRKAPKKVI 951
HGA+YLLHDRLH+CSDYHIADVCSLCGS+L + I + QK ++++ GLP + K
Sbjct: 1053 HGASYLLHDRLHSCSDYHIADVCSLCGSLLTATVIKSESQKKAKQDMLGLPTVRPAKNFA 1112
Query: 952 CHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
C AC+T+KGMETVAMPYVFRYLAAE AAMNIK+ L+L+N
Sbjct: 1113 CQACKTTKGMETVAMPYVFRYLAAELAAMNIKLELRLSN 1151
>B8BHP0_ORYSI (tr|B8BHP0) DNA-directed RNA polymerase OS=Oryza sativa subsp. indica
GN=OsI_34174 PE=3 SV=1
Length = 1086
Score = 1333 bits (3450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/999 (63%), Positives = 788/999 (78%), Gaps = 32/999 (3%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M +R SF R GYTDKAV+IRCV+ DQSS+T+KLYYL N SARLGFW+ GRE+LLPVG
Sbjct: 99 MGLIRGSFVNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVG 158
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
IVLKALIDTSD EI T+L CY++ YE+GKG V TQ + +RA++I++EVR LSLFTR +C
Sbjct: 159 IVLKALIDTSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTEC 218
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L ++G++F+ ++ + D ++TVA+AVLKDY+FVHL +N DKFNLLIFMLQKL+++VD T
Sbjct: 219 LLHLGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQT 278
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEIFVVKK 237
+ D D+LQ QEVLLPGHLIT++LK++L+DWL+ K E K+ +FD ++ V+K
Sbjct: 279 ASPDKADALQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRK 338
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
KT A + +I++M+K G++ + +GLDL QR G T+ A+RLN+ R++SHFR+VHRG+
Sbjct: 339 FLSKTSA-YVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGS 397
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
SFA +RTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT TCRI+S+++S+G+ KD+ KI
Sbjct: 398 SFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKI 457
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
K+S++ LV +GM QL+P++ GPPEVL V +DGCIVG I S ++E++
Sbjct: 458 KMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEV----------- 506
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
IP+DLEVGYVPLS GGAYPGLYLFT+P+RF+RPVR++ LSN NI+LIGPFEQ F
Sbjct: 507 ---IPEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAF 563
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
MEIRCPDGGDGGR FPATHEEIHPT +LSVVAN TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 564 MEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMG 623
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
F Q ++ R D K +HLQTPQTPIVRT+TY+KY +DE+P+GTNAIVAVL+YTGYDMEDAM
Sbjct: 624 FCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAM 683
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---SKLDSDGLPHVG 654
ILNKS+V+RGMF G I+QTE +DL+ + D + F KSN+ + + ++SDGLP +G
Sbjct: 684 ILNKSAVDRGMFRGHIFQTECIDLSAKS--RDNVTEFFCKSNLSRDTTAAIESDGLPRIG 741
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-LQKVNIRFRHPRNP 713
+ I P+E Y S+ N T + +K KGSEP +DYVAV+ N KD LQK NIR R RNP
Sbjct: 742 ENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNP 801
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 802 IIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAK 861
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
GSL G+F++ATPF SVK E+S ++D+LG ML GFNYHG E+LYSGV+G E
Sbjct: 862 AGSLKGKFIDATPFASSVK------ERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTE 915
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQ+TRQP FGEMERD+LLA
Sbjct: 916 MKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLA 975
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI--QPQKLPRREIGGLPPRKAPKKVI 951
HGA+YLLHDRLH+CSDYHIADVCS+CGS+L + I + QK +R++ GLP K PK
Sbjct: 976 HGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFA 1035
Query: 952 CHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
C AC+TS+GMETVAMPYVFRYLA+E AAMNIK+ L+L+N
Sbjct: 1036 CQACKTSRGMETVAMPYVFRYLASELAAMNIKLELRLSN 1074
>B9G6G0_ORYSJ (tr|B9G6G0) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_32024 PE=2 SV=1
Length = 1150
Score = 1320 bits (3415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/1030 (61%), Positives = 790/1030 (76%), Gaps = 63/1030 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M +R SF R GYTDKAV+IRCV+ DQSS+T+KLYYL N SARLGFW+ GRE+LLPVG
Sbjct: 132 MGLIRGSFVNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVG 191
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
IVLKALIDTSD EI T+L CY++ YE+GKG V TQ + +RA++I++EVR LSLFTR +C
Sbjct: 192 IVLKALIDTSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTEC 251
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L ++G++F+ ++ + D ++TVA+AVLKDY+FVHL +N DKFNLLIFMLQKL+++VD T
Sbjct: 252 LLHLGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQT 311
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEI--FV- 234
+ D D+LQ QEVLLPGHLIT++LK++L+DWL+ K E K+ +FD ++ F+
Sbjct: 312 ASPDKADALQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDFRDFIL 371
Query: 235 ----------------------------VKKCFDKTPARAISTSIENMLKTGRLVTNTGL 266
V+K KT A + +I++M+K G++ + +GL
Sbjct: 372 EGQVKGTSRVIETSSGKPCWLMRIGAQEVRKFLSKTSA-YVGKAIQSMIKVGKVNSQSGL 430
Query: 267 DLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDG 326
DL QR G T+ A+RLN+ R++SHFR+VHRG+SFA +RTT+VRKLLPESWGFLCPVHTPDG
Sbjct: 431 DLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPVHTPDG 490
Query: 327 EPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVL 386
EPCGLLNHMT TCRI+S+++S+G+ KD+ KIK+S++ LV +GM QL+P++ GPPEVL
Sbjct: 491 EPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMAQLLPRIERTGPPEVL 550
Query: 387 TVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTS 446
V +DGCIVG I S ++E++ IP+DLEVGYVPLS GGAYPGLYLFT+
Sbjct: 551 HVHVDGCIVGSIASAKIEEV--------------IPEDLEVGYVPLSHGGAYPGLYLFTN 596
Query: 447 PSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGM 506
P+RF+RPVR++ LSN NI+LIGPFEQ FMEIRCPDGGDGGR FPATHEEIHPT +
Sbjct: 597 PARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRNKLFPATHEEIHPTAI 656
Query: 507 LSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTST 566
LSVVAN TPWSDHNQSPRNMYQCQMAKQTM F Q ++ R D K +HLQTPQTPIVRT+T
Sbjct: 657 LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTAT 716
Query: 567 YTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGS 626
Y+KY +DE+P+GTNAIVAVL+YTGYDMEDAMILNKS+V+RGMF G I+QTE +DL+ +
Sbjct: 717 YSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKS- 775
Query: 627 RSDPSSRMFRKSNIEK---SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSE 683
D + F KSN+ + + ++SDGLP +G+ I P+E Y S+ N T + +K KGSE
Sbjct: 776 -RDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSE 834
Query: 684 PVYVDYVAVDVKNKKD-LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
P +DYVAV+ N KD LQK NIR R RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF
Sbjct: 835 PAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSA 894
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
TGMRPDLIINPHAFPSRMTIAMLLES+AAK GSL G+F++ATPF SVK E+S
Sbjct: 895 NTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASSVK------ERSN 948
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
++D+LG ML GFNYHG E+LYSGV+G E+ CEIF+GPVYYQRLRHMVSDKFQVR+TG
Sbjct: 949 SIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTG 1008
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
+DQ+TRQP FGEMERD+LLAHGA+YLLHDRLH+CSDYHIADVCS+CGS+
Sbjct: 1009 RIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSL 1068
Query: 923 LATSFI--QPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAM 980
L + I + QK +R++ GLP K PK C AC+TSKGMETVAMPYVFRYLA+E AAM
Sbjct: 1069 LTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAM 1128
Query: 981 NIKMTLKLNN 990
NIK+ L+L+N
Sbjct: 1129 NIKLELRLSN 1138
>Q337H6_ORYSJ (tr|Q337H6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=LOC_Os10g35290 PE=2 SV=2
Length = 1044
Score = 1318 bits (3412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/1030 (61%), Positives = 790/1030 (76%), Gaps = 63/1030 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M +R SF R GYTDKAV+IRCV+ DQSS+T+KLYYL N SARLGFW+ GRE+LLPVG
Sbjct: 26 MGLIRGSFVNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVG 85
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
IVLKALIDTSD EI T+L CY++ YE+GKG V TQ + +RA++I++EVR LSLFTR +C
Sbjct: 86 IVLKALIDTSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTEC 145
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L ++G++F+ ++ + D ++TVA+AVLKDY+FVHL +N DKFNLLIFMLQKL+++VD T
Sbjct: 146 LLHLGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQT 205
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEI--FV- 234
+ D D+LQ QEVLLPGHLIT++LK++L+DWL+ K E K+ +FD ++ F+
Sbjct: 206 ASPDKADALQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDFRDFIL 265
Query: 235 ----------------------------VKKCFDKTPARAISTSIENMLKTGRLVTNTGL 266
V+K KT A + +I++M+K G++ + +GL
Sbjct: 266 EGQVKGTSRVIETSSGKPCWLMRIGAQEVRKFLSKTSA-YVGKAIQSMIKVGKVNSQSGL 324
Query: 267 DLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDG 326
DL QR G T+ A+RLN+ R++SHFR+VHRG+SFA +RTT+VRKLLPESWGFLCPVHTPDG
Sbjct: 325 DLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPVHTPDG 384
Query: 327 EPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVL 386
EPCGLLNHMT TCRI+S+++S+G+ KD+ KIK+S++ LV +GM QL+P++ GPPEVL
Sbjct: 385 EPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMAQLLPRIERTGPPEVL 444
Query: 387 TVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTS 446
V +DGCIVG I S ++E++ IP+DLEVGYVPLS GGAYPGLYLFT+
Sbjct: 445 HVHVDGCIVGSIASAKIEEV--------------IPEDLEVGYVPLSHGGAYPGLYLFTN 490
Query: 447 PSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGM 506
P+RF+RPVR++ LSN NI+LIGPFEQ FMEIRCPDGGDGGR FPATHEEIHPT +
Sbjct: 491 PARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRNKLFPATHEEIHPTAI 550
Query: 507 LSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTST 566
LSVVAN TPWSDHNQSPRNMYQCQMAKQTM F Q ++ R D K +HLQTPQTPIVRT+T
Sbjct: 551 LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTAT 610
Query: 567 YTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGS 626
Y+KY +DE+P+GTNAIVAVL+YTGYDMEDAMILNKS+V+RGMF G I+QTE +DL+ +
Sbjct: 611 YSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKS- 669
Query: 627 RSDPSSRMFRKSNIEK---SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSE 683
D + F KSN+ + + ++SDGLP +G+ I P+E Y S+ N T + +K KGSE
Sbjct: 670 -RDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSE 728
Query: 684 PVYVDYVAVDVKNKKD-LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
P +DYVAV+ N KD LQK NIR R RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF
Sbjct: 729 PAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSA 788
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
TGMRPDLIINPHAFPSRMTIAMLLES+AAK GSL G+F++ATPF SVK E+S
Sbjct: 789 NTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASSVK------ERSN 842
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
++D+LG ML GFNYHG E+LYSGV+G E+ CEIF+GPVYYQRLRHMVSDKFQVR+TG
Sbjct: 843 SIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTG 902
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
+DQ+TRQP FGEMERD+LLAHGA+YLLHDRLH+CSDYHIADVCS+CGS+
Sbjct: 903 RIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSL 962
Query: 923 LATSFI--QPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAM 980
L + I + QK +R++ GLP K PK C AC+TSKGMETVAMPYVFRYLA+E AAM
Sbjct: 963 LTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAM 1022
Query: 981 NIKMTLKLNN 990
NIK+ L+L+N
Sbjct: 1023 NIKLELRLSN 1032
>I1I530_BRADI (tr|I1I530) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI3G29917 PE=3 SV=1
Length = 1100
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/999 (61%), Positives = 752/999 (75%), Gaps = 60/999 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M VR +F +R GYTDKAVVIRCV+ DQ+S+TVKLYYL+N SARLGFW+ RE LLPVG
Sbjct: 145 MGMVRGAFEKRGPGYTDKAVVIRCVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVG 204
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
IVLKALIDTSD EI +L CY++KYE+GKG V Q + +RA++I++EV
Sbjct: 205 IVLKALIDTSDREIFASLTCCYSDKYERGKGVVSNQLIGERAQIILDEV----------- 253
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
A+AVLKDYV VHL +N KFNLLIFMLQKL++LVD T
Sbjct: 254 -----------------------AEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQT 290
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEIFVVKK 237
+ DNPD+LQ QE LLPG+LIT++LK++++DWL+ K E K+ +F+F ++K
Sbjct: 291 ASPDNPDALQYQEALLPGYLITVFLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRK 350
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
K + ++ +IE+++K GR + + LDL QR G ++QA+RLN+ R++SHFR+VHRG+
Sbjct: 351 FLCKH-STSVGRAIESLIKIGRANSQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGS 409
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
+FA +RTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMT CRI+S++ S+G++KD+ KI
Sbjct: 410 AFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKI 469
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
K +L LV GM L PK+ GPPEVL V LDGCIVG I S ++E++
Sbjct: 470 KDRLLAELVRGGMIPLSPKMEHTGPPEVLHVHLDGCIVGSIGSAKIEELT---------- 519
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
P+DLEVGYVPLS+GGAYPGLY FTSP+RFVRPV+N+ L + +I+LIG FEQ F
Sbjct: 520 ----PEDLEVGYVPLSIGGAYPGLYFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAF 575
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
MEIRCPDGGDGGRK SFPATHEEIHPT MLSVVAN TPWS+HNQSPRNMYQCQMAKQTM
Sbjct: 576 MEIRCPDGGDGGRKESFPATHEEIHPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMG 635
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
F Q ++ R D K +HLQTPQ+PIVRT+TY KY++DE+P+GTNAIVAVL+YTGYDMEDAM
Sbjct: 636 FCGQALKFRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAM 695
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHVG 654
ILNKS+V+RGMF G IYQTE +DL+ +R + +F KS++ + +DSDGLP VG
Sbjct: 696 ILNKSAVDRGMFRGDIYQTECIDLST--TRRGSVAEIFAKSSLSRDSSSVIDSDGLPRVG 753
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKK-DLQKVNIRFRHPRNP 713
+ I P+E Y S YN T + + KG+EP +DYVAV+ N K LQKVNIR R RNP
Sbjct: 754 ETIVPNEQYYSTYNTLTGAIRPTRLKGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNP 813
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 814 IIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAK 873
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
GSLHG FV+ATPF SVK+ +G K ++D++G ML GFNYHG+EVLYSG++G E
Sbjct: 874 AGSLHGNFVDATPFASSVKEGDGNPWKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTE 933
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
LTCEIFIGPVYYQRLRHMVSDKFQVR+TG +DQVTRQP FGEMERD+LLA
Sbjct: 934 LTCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLA 993
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI--QPQKLPRREIGGLPPRKAPKKVI 951
HGA+YLLHDRLH+CSDYHIADVCSLCGS+L + I + Q +R + G+ K PK +
Sbjct: 994 HGASYLLHDRLHSCSDYHIADVCSLCGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLA 1053
Query: 952 CHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
C ACQT+KGMETVAMPYVFRYLAAE AAMN+K+ L+L+N
Sbjct: 1054 CQACQTNKGMETVAMPYVFRYLAAELAAMNVKLDLRLSN 1092
>N1R3Z7_AEGTA (tr|N1R3Z7) DNA-directed RNA polymerase I subunit RPA2 OS=Aegilops
tauschii GN=F775_25117 PE=4 SV=1
Length = 1856
Score = 1182 bits (3059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/941 (60%), Positives = 713/941 (75%), Gaps = 36/941 (3%)
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
+ALIDTSD EI +L CY++K E+GKG V TQ + +R ++I++EVR LSLFTR QCL +
Sbjct: 243 EALIDTSDREIFASLTCCYSDKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQCLVH 302
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-DDNFDKFNLLIFMLQKLFSLVDGTSV 182
IG++F+ + + D Y+TVA+AV+KD++ VHL +DN KFNLLIFMLQKL++LVD T+
Sbjct: 303 IGKYFRSAMEGFEKDDYETVAEAVIKDHILVHLQNDNHAKFNLLIFMLQKLYALVDQTTS 362
Query: 183 LDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEIFVVKKCF 239
DNPD+LQ QE LLPGHLIT++LK++++DWLQ K E K+ +F+ + ++K
Sbjct: 363 PDNPDALQFQEALLPGHLITVFLKDRIQDWLQKSKRLIMEEITKNKSFELNNSLEIRKFL 422
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
K ++ +IE ++K GR + + LDL QR G T+QA+RLN+ R++SHFR+VHRG+SF
Sbjct: 423 SKY-TTSVGRAIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSSF 481
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMT CRI+S ++S+G+IKD+ KIK
Sbjct: 482 AKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIKD 541
Query: 360 SILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSA 419
+L LV GM L+PK+ GPPEVL V LDGCIVG I S ++E++V ++R LK+ +
Sbjct: 542 KLLVELVRGGMIPLLPKMEHTGPPEVLHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAHP 601
Query: 420 MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFME 479
P+DLEVGYVPLS+GGAYPGLYLFTSP+RFVRPV+N+ L + I+LIGPFEQ FME
Sbjct: 602 ATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGETRIELIGPFEQAFME 661
Query: 480 IRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFS 539
IRCPDGGDGGRK FPATHEEIHPT +LSVVAN TPWSDHNQSPRNMYQCQMAKQTM F
Sbjct: 662 IRCPDGGDGGRKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFC 721
Query: 540 SQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMIL 599
Q +++R D K +HLQTPQ+PIVRT+TY KY++DE+P+GTNAIVAVL+YTGYDMEDAMIL
Sbjct: 722 GQALKYRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMIL 781
Query: 600 NKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHVG-- 654
NKS+V+RGMF G I+QTE +DL+ + R++ +F KS + + +DSDGLP VG
Sbjct: 782 NKSAVDRGMFRGDIFQTECIDLSAK--RTENVPEIFAKSPLSRDTDNVIDSDGLPRVGER 839
Query: 655 ---------------------QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVD 693
Q + P E Y SIYN T + ++ KG+EP +DYVA++
Sbjct: 840 KEKWSSFFLRYCPYSEMYFCEQTVVPYEQYYSIYNTLTGAIRPVRLKGTEPAAIDYVALN 899
Query: 694 VKNKK-DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLII 752
N K LQKVNIR R RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLII
Sbjct: 900 GTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLII 959
Query: 753 NPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQML 812
NPHAFPSRMTIAML+ES+AAK GS+HG+F++ATPF SVK+D K ++D+LG ML
Sbjct: 960 NPHAFPSRMTIAMLIESIAAKAGSVHGKFIDATPFASSVKEDGENRCKYDSIVDELGPML 1019
Query: 813 REKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPX 872
GFN+HG EVLYSG++G EL EIFIGPVYYQRLRHMVSDKFQVR+TG +DQVT+QP
Sbjct: 1020 ASYGFNHHGTEVLYSGLFGTELQFEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQVTKQPI 1079
Query: 873 XXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQP-- 930
FGEMERD+LLAHGA+YLLHDRLHTCSDYH+ADVCSLCGS+L+ + I+
Sbjct: 1080 GGRKHGGGIRFGEMERDALLAHGASYLLHDRLHTCSDYHVADVCSLCGSLLSATVIKSDT 1139
Query: 931 QKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFR 971
QK +R + G+ + K C ACQT+KGMETVAMPYVFR
Sbjct: 1140 QKKSKRHLLGVNTVRPAKNFTCQACQTNKGMETVAMPYVFR 1180
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGF 48
M VR +F +R GYTDKAVV+RCV DQSS+TVKLYYL+N SARLGF
Sbjct: 118 MGMVRGAFIKRGAGYTDKAVVMRCVHHDQSSVTVKLYYLQNGSARLGF 165
>M7ZRZ1_TRIUA (tr|M7ZRZ1) Putative DNA-directed RNA polymerase I subunit RPA2
OS=Triticum urartu GN=TRIUR3_22611 PE=4 SV=1
Length = 1253
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/934 (60%), Positives = 707/934 (75%), Gaps = 14/934 (1%)
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRL-QCLN 122
+ALIDTSD EI +L CY++K E+GKG V TQ + +R ++I++E Q LF + L+
Sbjct: 165 EALIDTSDREIFASLTCCYSDKRERGKGVVSTQLIGERTQIILDEYLQALLFVDIVNDLS 224
Query: 123 YIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-DDNFDKFNLLIFMLQKLFSLVDGTS 181
G++F+ + + D Y+TVA+AV+KDY+ VHL +DN KFNLLIFMLQKL++LVD T+
Sbjct: 225 NAGKYFRSAMEGFEKDDYETVAEAVIKDYILVHLQNDNHAKFNLLIFMLQKLYALVDQTT 284
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEIFVVKKC 238
DNPD+LQ QE LLPGHLIT++LK++++DWLQ K E K+ +F + ++K
Sbjct: 285 SPDNPDALQFQEALLPGHLITVFLKDRIQDWLQKSKRLIMEEITKNKSFQLNNSLEIRKF 344
Query: 239 FDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGAS 298
K ++ +IE ++K GR + + LDL QR G T+QA+RLN+ R++SHFR+VHRG+S
Sbjct: 345 LSKYTT-SVGRAIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSS 403
Query: 299 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIK 358
FA +RTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMT CRI+S ++S+G+IKD+ KIK
Sbjct: 404 FAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIK 463
Query: 359 ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSS 418
+L LV GM L+PK+ GPPE+L V LDGCIVG I S ++E++V ++R LK+ +
Sbjct: 464 DKLLVELVRGGMIPLLPKMEHTGPPEILHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAH 523
Query: 419 AMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFM 478
P+DLEVGYVPLS+GGAYPGLYLFTSP+RFVRPV+N+ L + I+LIGPFEQ FM
Sbjct: 524 PATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGEPRIELIGPFEQAFM 583
Query: 479 EIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAF 538
EIRCPDGGDGGRK FPATHEEIHPT +LSVVAN TPWSDHNQSPRNMYQCQMAKQTM F
Sbjct: 584 EIRCPDGGDGGRKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF 643
Query: 539 SSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMI 598
Q +++R D K +HLQTPQ+PIVRT+TY KY++DE+P+GTNAIVAVL+YTGYDMEDAMI
Sbjct: 644 CGQALKYRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMI 703
Query: 599 LNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHVGQ 655
LNKS+V+RGMF G I+QTE +DL+ + + + P +F KS + + +DSDGLP VG+
Sbjct: 704 LNKSAVDRGMFRGDIFQTECIDLSAKRTENVPE--IFAKSPLSRDTNNVIDSDGLPRVGE 761
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKK-DLQKVNIRFRHPRNPV 714
+ P E Y SIYN T + ++ KG+EP +DYVA++ N K LQKVNIR R RNP+
Sbjct: 762 TVVPYEQYYSIYNTLTGAIRPVRLKGTEPAVIDYVALNGTNSKGSLQKVNIRLRRKRNPI 821
Query: 715 IGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 774
IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLIINPHAFPSRMTIAML+ES+AAK
Sbjct: 822 IGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLIESIAAKA 881
Query: 775 GSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKEL 834
GS HG+F++ATPF SVK+D K ++D+LG ML GFN+HG EVLYSG++G EL
Sbjct: 882 GSAHGKFIDATPFASSVKEDGENRCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTEL 941
Query: 835 TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAH 894
EIFIGPVYYQRLRHMVSDKFQVR+TG +DQVT+QP FGEMERD+LLAH
Sbjct: 942 QFEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQVTKQPIGGRKHGGGIRFGEMERDALLAH 1001
Query: 895 GAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQP--QKLPRREIGGLPPRKAPKKVIC 952
GA+YLLHDRLHTCSDYH+ADVCSLCGS+L+ + I QK +R + GL + K C
Sbjct: 1002 GASYLLHDRLHTCSDYHVADVCSLCGSLLSATVINSDTQKKSKRHMLGLNTVRPAKNFAC 1061
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
ACQT+KGMETVAMPYVFR + A + L
Sbjct: 1062 QACQTNKGMETVAMPYVFRSMICSLQAFKAMLRL 1095
>A9T5Q2_PHYPA (tr|A9T5Q2) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_191908 PE=3 SV=1
Length = 1199
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1014 (55%), Positives = 720/1014 (71%), Gaps = 49/1014 (4%)
Query: 5 RNSFSQRREGYTDKAVVI-RCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
R S+ R Y+DK V+I RCVR DQS++T+++YY+ SA LGF V+ +E+L+PVGI+L
Sbjct: 204 RTSYKNRGPSYSDKGVMISRCVRPDQSAVTMRMYYMNYGSASLGFSVRRQEFLIPVGIIL 263
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KALI++++ EI L S ++ + KGA+G+Q V RA++I+EEVRQLSLFTR CL +
Sbjct: 264 KALIESNEYEIYEQLMSIQSDS-KAMKGALGSQFVSQRAKIILEEVRQLSLFTRHDCLQF 322
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+G L +V + VL DY+ VHLD+ DKFNLL+FMLQKLF+LVDG +
Sbjct: 323 LGGLTCYFLL------VKSVGEQVLNDYILVHLDNPLDKFNLLVFMLQKLFALVDGMAAP 376
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSE-----IFV 234
DN D+LQN E+LLPGHL+T+ +K++++DWL + EMK K D + +
Sbjct: 377 DNADALQNHEILLPGHLLTIVVKDRIQDWLLRVQGQLLKEMKEKPAENDLQQPIDVTVKH 436
Query: 235 VKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
V+K F+K PA +S +E +L TG LV+ +GLDL Q G+T+ A++LN+LR+LSHFR+VH
Sbjct: 437 VQKVFEKVPASDVSKKVEYLLNTGNLVSQSGLDLNQVGGFTLVAEKLNFLRYLSHFRSVH 496
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA FA LRTTTVRKLLPESWGF+CPVHTPDG PCGLLNH+T C+I+S D++G+ KD
Sbjct: 497 RGAFFATLRTTTVRKLLPESWGFMCPVHTPDGSPCGLLNHLTAACQISSDLDARGNKKDP 556
Query: 355 FKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
I+ S+ ++V+ G+ ++PKL PPE LTVLLDGC++G + +G + I+ H+R LK
Sbjct: 557 LAIRKSVTKVMVNLGLVPVLPKLSNMAPPEYLTVLLDGCVIGHLATGAIPSIIEHLRRLK 616
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V + +P D+E+ Y+P + G+YPGLYL T+PSRF R V+ + + +++LIGP E
Sbjct: 617 VVDGSEVPADMEIAYIPCTSAGSYPGLYLATTPSRFTRTVKQMF----GDGSLELIGPLE 672
Query: 475 QVFMEIRCPDGGDGGRKSSFPA-THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV + CP GG + P THEEI+ T LSVVA+ TPWSDHNQSPRNMYQCQM K
Sbjct: 673 QV-NQFLCP----GGNEPIGPKPTHEEINATAFLSVVASLTPWSDHNQSPRNMYQCQMGK 727
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F +Q +Q RAD K+Y +QTPQ PI +T+ + KY+++++PTGTNAIVAVLAYTG+DM
Sbjct: 728 QTMGFPAQALQCRADNKMYRIQTPQMPIAQTNAWNKYHMNQFPTGTNAIVAVLAYTGFDM 787
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKS--------NIEKSK- 644
EDAMILNKSSVERG+ +GQ+Y++ET+DLTE R D + +F +S +KS
Sbjct: 788 EDAMILNKSSVERGLHYGQVYKSETIDLTELRQRGDGVTNVFARSGAMARFKEQADKSAN 847
Query: 645 -LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYV-AVDVKNKKDLQK 702
+D DGLP+VGQ + +PYCS+ N T + K KGSE VDYV A++ +K LQK
Sbjct: 848 FIDIDGLPYVGQTLTEGDPYCSVVNKMTGQSKISKLKGSEAAIVDYVAAINTGSKDPLQK 907
Query: 703 VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
V IR RHPR P IGDKFSSRHGQKGVCSQLWPDVDMPF TGMRPD+IINPHAFPSRMT
Sbjct: 908 VTIRTRHPRYPQIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDIIINPHAFPSRMT 967
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVK-----KDNGESEKSGLLLDDLGQMLREKGF 817
I MLLES+AAK G+L G+F+NATPF+ S K KD ++ + D LGQ + GF
Sbjct: 968 IGMLLESMAAKAGALDGKFMNATPFKKSSKEGGDGKDFAKTGGNDGTADLLGQQMNAHGF 1027
Query: 818 NYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXX 877
NYHG EV+YSGV G E CEI++G VYYQRLRHMVSDK+QVRS G V+ VTRQP
Sbjct: 1028 NYHGTEVMYSGVLGTEFVCEIYLGVVYYQRLRHMVSDKYQVRSMGPVNPVTRQPVKGRKV 1087
Query: 878 XXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRRE 937
FGEMERDSLLAHGAAYLLHDRLH CSDYH A+VC CGS+LAT P R
Sbjct: 1088 GGGIRFGEMERDSLLAHGAAYLLHDRLHACSDYHTANVCGFCGSLLATV---PLPTTRGS 1144
Query: 938 IG--GLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+G GL ++ KK IC C TSKG+ETVAMP+VFRYLAAE AAMNIK+T+ L+
Sbjct: 1145 LGSLGLGIQQGGKK-ICRVCNTSKGIETVAMPFVFRYLAAELAAMNIKLTMTLS 1197
>D8TFV8_SELML (tr|D8TFV8) DNA-directed RNA polymerase OS=Selaginella moellendorffii
GN=SELMODRAFT_270143 PE=3 SV=1
Length = 1172
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1002 (54%), Positives = 698/1002 (69%), Gaps = 56/1002 (5%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
RN+F R G++D +++RCVR DQ+ T+KLYYL + +ARLGF ++ +E+++PVGI+LK
Sbjct: 206 RNAFQNRGAGFSDIGLMMRCVRPDQTGSTIKLYYLHHGTARLGFVIRRQEFVIPVGIILK 265
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
A +DTSD EI L + + E+ KGAVG+Q + RAR+IIEE ++ TRL CL YI
Sbjct: 266 AFMDTSDREIFEQLSGIHVQGQEQSKGAVGSQLISQRARIIIEETQRQPCLTRLDCLRYI 325
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
+ VL+ +VFVHLD+ DKFNLLI ML KLF++VDG++ +D
Sbjct: 326 ED--------------------VLRRFVFVHLDNFRDKFNLLIHMLHKLFAVVDGSASID 365
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRK---SGTFDFSEIFVVKKCFDK 241
+ D+LQ+QE+LLPGHL+ +YLK++LEDWL K ++R+ FD S+ V K +K
Sbjct: 366 SSDTLQHQELLLPGHLMNIYLKDRLEDWLYRCKRLLQREMQLKEEFDLSDHAKVLKIVEK 425
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
A I IE +L TG + + + +DLQQ G++V A++LN+ RF+SHFR+VHRGA FA
Sbjct: 426 NNAVDIGKRIEYLLSTGNIQSQSHMDLQQANGFSVVAEKLNFFRFISHFRSVHRGAFFAR 485
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISI 361
RTT+VRKLLPESWGFLCPVHTPDGEPCGLL H++ C+I++ D KD I +I
Sbjct: 486 QRTTSVRKLLPESWGFLCPVHTPDGEPCGLLTHLSSLCKISTDLDQNNHPKDPKVIHRTI 545
Query: 362 LDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMI 421
+L GM + P L L GPP+ L VLLDGC++G +P G + + V+H+R LKV
Sbjct: 546 ATVLAQLGMVSISPLLALSGPPKYLAVLLDGCVLGYMPVGNIPQTVSHLRSLKV------ 599
Query: 422 PDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIR 481
P DLE+GYVP + GAYPGL+L+T+PSRF+RPV+ + + I+LI FEQ +MEI
Sbjct: 600 PIDLEIGYVPCTYAGAYPGLFLYTTPSRFLRPVKQL-----DTGAIELISAFEQAYMEIA 654
Query: 482 CPDGGDGGRK-SSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSS 540
CPDGG+ GR S+ PATH E+HPT MLSVVA+ TPWSDHNQSPRNMYQCQM KQT+ F+S
Sbjct: 655 CPDGGNCGRTPSAPPATHIELHPTAMLSVVASSTPWSDHNQSPRNMYQCQMGKQTLGFAS 714
Query: 541 QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILN 600
Q ++ R D K+Y+LQ PQ+P+ R Y KYN+DE+P GTNA+VAVLAYTG+DMEDAMI+N
Sbjct: 715 QALKFRTDHKMYNLQNPQSPVARNVNYKKYNMDEFPLGTNAVVAVLAYTGFDMEDAMIMN 774
Query: 601 KSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFR----KSNIEKSKLDSDGLPHVGQM 656
KSS+ERG+ HGQIY+TE VDL+ +SD +F K NI + LD DGLPH+GQ
Sbjct: 775 KSSMERGLAHGQIYKTEHVDLSLLQKKSDGIVNLFSRPTGKRNIH-NFLDVDGLPHIGQT 833
Query: 657 IRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVIG 716
+ +PYCS+ N T K K +E V +D V + LQK+ ++FRH RNPVIG
Sbjct: 834 MHNGDPYCSVLNTMTGDAKLHKLKAAENVVIDSVIAIGHGRDPLQKIAVKFRHDRNPVIG 893
Query: 717 DKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGS 776
DKFSSRHGQKG+ SQLWPD+DMPF TGMRPD+IINPHAFPSRMTI ML+ES+AAK G
Sbjct: 894 DKFSSRHGQKGILSQLWPDIDMPFSAVTGMRPDIIINPHAFPSRMTIGMLMESMAAKAGV 953
Query: 777 LHGEFVNATPFRGSVKKDNGESEKSGL----------LLDDLGQMLREKGFNYHGLEVLY 826
L GE+V++TPFR S + + K+G + + G+ L + GFNYHG EV+Y
Sbjct: 954 LRGEYVDSTPFRSSSAALDAKDGKTGSGYKGKDKHYPAISEFGEQLAQHGFNYHGTEVMY 1013
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG+ G ELTCEIFIG VYYQRLRHMVSDKFQVRS G ++ VTRQP FGEM
Sbjct: 1014 SGLLGTELTCEIFIGVVYYQRLRHMVSDKFQVRSLGAINPVTRQPVGGRKLGGGIRFGEM 1073
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERDSLLAHGAAYLLHDRLHT SDYH+ DVC+ CGS+L+T + P K P + R
Sbjct: 1074 ERDSLLAHGAAYLLHDRLHTSSDYHVGDVCTTCGSLLSTLMV-PSKQP-----AVGARNK 1127
Query: 947 PKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PKK C CQ++ G+ VAMP+VFRYLAAE AAMN+K+TLK+
Sbjct: 1128 PKKATCKVCQSNAGVVKVAMPFVFRYLAAELAAMNVKLTLKV 1169
>Q8LNU6_ORYSJ (tr|Q8LNU6) DNA-directed RNA polymerase (Fragment) OS=Oryza sativa
subsp. japonica GN=OSJNBa0041P03.1 PE=3 SV=1
Length = 855
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/888 (60%), Positives = 660/888 (74%), Gaps = 85/888 (9%)
Query: 143 VAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLDNPDSLQNQEVLLPGHLIT 202
VA+AVLKDY+FVHL +N DKFNLLIFMLQKL+++VD T+ D D+LQ QEVLLPGHLIT
Sbjct: 1 VAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADALQYQEVLLPGHLIT 60
Query: 203 LYLKEKLEDWLQSGKD---EMKRKSGTFDFSEI--FV----------------------- 234
++LK++L+DWL+ K E K+ +FD ++ F+
Sbjct: 61 VFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDFRDFILEGQVKGTSRVIETSSGKPCWLM 120
Query: 235 ------VKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLS 288
V+K KT A + +I++M+K G++ + +GLDL QR G T+ A+RLN+ R++S
Sbjct: 121 RIGAQEVRKFLSKTSA-YVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYIS 179
Query: 289 HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQ 348
HFR+VHRG+SFA +RTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT TCRI+S+++S+
Sbjct: 180 HFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSE 239
Query: 349 GSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
G+ KD+ KIK+S++ LV +GM QL+P++ GPPEVL V +DGCIVG I S ++E++
Sbjct: 240 GATKDFQKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEV-- 297
Query: 409 HIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
IP+DLEVGYVPLS GGAYPGLYLFT+P+RF+RP
Sbjct: 298 ------------IPEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPA-------------- 331
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
FMEIRCPDGGDGGR FPATHEEIHPT +LSVVAN TPWSDHNQSPRNMYQ
Sbjct: 332 --------FMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQ 383
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQMAKQTM F Q ++ R D K +HLQTPQTPIVRT+TY+KY +DE+P+GTNAIVAVL+Y
Sbjct: 384 CQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSY 443
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---SKL 645
TGYDMEDAMILNKS+V+RGMF G I+QTE +DL+ + D + F KSN+ + + +
Sbjct: 444 TGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKS--RDNVTEFFCKSNLSRDTTAAI 501
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-LQKVN 704
+SDGLP +G+ I P+E Y S+ N T + +K KGSEP +DYVAV+ N KD LQK N
Sbjct: 502 ESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKAN 561
Query: 705 IRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIA 764
IR R RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLIINPHAFPSRMTIA
Sbjct: 562 IRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIA 621
Query: 765 MLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEV 824
MLLES+AAK GSL G+F++ATPF SVK E+S ++D+LG ML GFNYHG E+
Sbjct: 622 MLLESIAAKAGSLKGKFIDATPFASSVK------ERSNSIVDELGPMLASYGFNYHGTEI 675
Query: 825 LYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFG 884
LYSGV+G E+ CEIF+GPVYYQRLRHMVSDKFQVR+TG +DQ+TRQP FG
Sbjct: 676 LYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFG 735
Query: 885 EMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI--QPQKLPRREIGGLP 942
EMERD+LLAHGA+YLLHDRLH+CSDYHIADVCS+CGS+L + I + QK +R++ GLP
Sbjct: 736 EMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLP 795
Query: 943 PRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
K PK C AC+TSKGMETVAMPYVFRYLA+E AAMNIK+ L+L+N
Sbjct: 796 TVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLSN 843
>F2EHB5_HORVD (tr|F2EHB5) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum PE=2 SV=1
Length = 978
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/795 (63%), Positives = 627/795 (78%), Gaps = 11/795 (1%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M VR +F +R GYTDKAVV+RCV DQSS+TVKLYYL+N SARLGFW GRE LLPVG
Sbjct: 179 MGMVRGAFIKRGAGYTDKAVVMRCVHHDQSSVTVKLYYLQNGSARLGFWFGGREILLPVG 238
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
I+LKALIDTSD EI +L CY++K E+GKG V TQ + +R ++I++EVR LSLFTR QC
Sbjct: 239 IILKALIDTSDREIFASLTCCYSDKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQC 298
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-DDNFDKFNLLIFMLQKLFSLVDG 179
L +IG++F+ + + D Y+TVA+AV+KDY+ VHL +DN KFNLLIFMLQKL++LVD
Sbjct: 299 LVHIGKYFRSAMEGFEKDDYETVAEAVIKDYILVHLQNDNHAKFNLLIFMLQKLYALVDQ 358
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSEIFVVK 236
T+ DNPD+LQ QE LLPGHLIT++LK++++DWLQ K E K+ +F+ + ++
Sbjct: 359 TTSPDNPDALQFQEALLPGHLITVFLKDRIQDWLQKSKRLIMEEITKNKSFELNSSLEIR 418
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K K ++ +IE ++K GR + + LDL QR G T+QA+RLN+ R++SHFR+VHRG
Sbjct: 419 KFLSKY-TTSVGRAIEALIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRG 477
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+SFA +RTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMT TCRI+S ++S+G+IKD+ K
Sbjct: 478 SSFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSCYNSEGAIKDFQK 537
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
IK +L LV GM L+PK+ GPPE++ V LDGCIVG I S ++E++V ++R LK+
Sbjct: 538 IKDKLLVELVRGGMIPLLPKMEHTGPPEIMHVHLDGCIVGSIASAKIEEVVNYLRRLKLL 597
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+ P+DLEVGYVPLS+GGAYPGLYLFTSP+RFVRPV+N+ L + +I+LIGPFEQ
Sbjct: 598 AHPATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGEPHIELIGPFEQA 657
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FMEIRCPDGGDGGRK FPATHEEIHPT +LSVVAN TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 658 FMEIRCPDGGDGGRKEKFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTM 717
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
F Q ++ R D K +HLQTPQ+PIVRT+TY KY++DE+P+GTNAIVAVL+YTGYDMEDA
Sbjct: 718 GFCGQALKFRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDA 777
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK---LDSDGLPHV 653
MILNKS+V+RGMF G I+QTE +DL+ + R++ +F KS + K +DSDGLP V
Sbjct: 778 MILNKSAVDRGMFRGDIFQTECIDLSAK--RTENVPEIFAKSPLSKGTGDVIDSDGLPRV 835
Query: 654 GQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKK-DLQKVNIRFRHPRN 712
G+ + P E Y S+YN T + ++ KG+EP +DYVA++ N K LQKVNIR R RN
Sbjct: 836 GETVVPYEQYYSVYNTLTGAIRPVRLKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKRN 895
Query: 713 PVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAA 772
P+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDLIINPHAFPSRMTIAMLLES+AA
Sbjct: 896 PIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAA 955
Query: 773 KGGSLHGEFVNATPF 787
K GS+HG+F++ATPF
Sbjct: 956 KAGSVHGKFIDATPF 970
>G7JR14_MEDTR (tr|G7JR14) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_4g124030 PE=3 SV=1
Length = 1341
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/635 (78%), Positives = 559/635 (88%), Gaps = 20/635 (3%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MSTVR+SFS+RREGYTDKAVVIRCVRADQ+SLTVKLY+LRN SARLGFW+ GREY+LPVG
Sbjct: 193 MSTVRSSFSERREGYTDKAVVIRCVRADQTSLTVKLYHLRNGSARLGFWIHGREYMLPVG 252
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSL-FTRLQ 119
I+LKALIDT+D EI NL SCY+EKYEKGKG VGTQ V +RA++I++EV ++S FTRL+
Sbjct: 253 ILLKALIDTTDREIYANLTSCYSEKYEKGKGVVGTQLVGERAKIILDEVCEVSKKFTRLE 312
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
CL YIGEHFQPI+ EL+N+S+ TVA VLK+Y+FVHL++NFDKFNLLIFMLQKLFSLVD
Sbjct: 313 CLEYIGEHFQPIMHELRNESHYTVADDVLKNYIFVHLENNFDKFNLLIFMLQKLFSLVDQ 372
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKE---------KLEDWLQSGK----DEMKR---- 222
TSV DNPDSLQNQEVLLPGHLIT+YLK KLE+WL GK DE+KR
Sbjct: 373 TSVPDNPDSLQNQEVLLPGHLITIYLKAGRHMLTGLAKLEEWLAKGKTLLLDEIKRGGKI 432
Query: 223 -KSG-TFDFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADR 280
K G FDF + VKK +K A + +IE+ML TGRL T+ LDL Q +G T+QA+R
Sbjct: 433 GKIGEKFDFRKFHHVKKVLEKNHASGVGKAIESMLTTGRLATSIPLDLPQTSGLTLQAER 492
Query: 281 LNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCR 340
LN+LRFLSHFR VHRGA FAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNHMT TCR
Sbjct: 493 LNFLRFLSHFRHVHRGALFAGLRTTTVRKLLPESWGFLCPVHTPDGGPCGLLNHMTHTCR 552
Query: 341 ITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPS 400
ITS++DSQG +K+Y+KIK+SIL+IL++ GMTQ +PK+ LPGPPEVLTVLLDGCIVG IPS
Sbjct: 553 ITSFYDSQGKVKNYYKIKLSILNILIEIGMTQSLPKIFLPGPPEVLTVLLDGCIVGYIPS 612
Query: 401 GEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISIL 460
EVEK+VAHIRELKVSS+A+IPDDLEVGYVPLSMGGAYPGLYLFTSPSRF+RPVRN+SI
Sbjct: 613 TEVEKVVAHIRELKVSSAAVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNLSIP 672
Query: 461 SNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHN 520
SN N+NI+LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVAN TPWSDHN
Sbjct: 673 SNGNENIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANLTPWSDHN 732
Query: 521 QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN 580
QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTS YT+YNIDE+PTGTN
Sbjct: 733 QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSAYTEYNIDEFPTGTN 792
Query: 581 AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQ 615
AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQ
Sbjct: 793 AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQ 827
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 292/384 (76%), Positives = 330/384 (85%), Gaps = 8/384 (2%)
Query: 613 IYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGLPHVGQMIRPDEPYCSIYNAS 670
+QTET+DLTE GS+++ SS +FRKSN++K +DSDGLPHVGQMI PDEPYCSIYN
Sbjct: 959 FWQTETIDLTELGSQAERSSTIFRKSNLDKGCHSIDSDGLPHVGQMIGPDEPYCSIYNEV 1018
Query: 671 TSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 730
T+ T ++KKG+EP Y+D VAVD+K K +K NIRFRHPRNP+IGDKFSSRHGQKGVCS
Sbjct: 1019 TNKTRLIRKKGTEPAYIDCVAVDLK--KHRRKANIRFRHPRNPIIGDKFSSRHGQKGVCS 1076
Query: 731 QLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGS 790
QLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHG+F +ATPFR S
Sbjct: 1077 QLWPDIDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPFRSS 1136
Query: 791 VKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRH 850
V+ + KS L+D+LG ML+EKGFNYHG EVLYSGVYG ELTCEIFIGPVYYQRLRH
Sbjct: 1137 VEPGS----KSASLVDELGDMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRLRH 1192
Query: 851 MVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDY 910
MVSDK+QVRSTGTVDQ+TRQP FGEMERDSLLAHGAAYLLHDRLHTCSDY
Sbjct: 1193 MVSDKYQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDY 1252
Query: 911 HIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVF 970
HIADVCS+CGSML+T+FI+PQK P R+I G+P R+AP+KV CHACQTSKGMETVAMPY+F
Sbjct: 1253 HIADVCSICGSMLSTTFIEPQKRPVRDIPGIPVRRAPRKVTCHACQTSKGMETVAMPYIF 1312
Query: 971 RYLAAEFAAMNIKMTLKLNNGASA 994
RYLAAE AAMNIKMTLKL+NGA+
Sbjct: 1313 RYLAAELAAMNIKMTLKLSNGANV 1336
>M0UYE0_HORVD (tr|M0UYE0) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum PE=3 SV=1
Length = 670
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/662 (64%), Positives = 522/662 (78%), Gaps = 8/662 (1%)
Query: 335 MTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCI 394
MT TCRI+S ++S+G+IKD+ KIK +L LV GM L+PK+ GPPE++ V LDGCI
Sbjct: 1 MTSTCRISSCYNSEGAIKDFQKIKDKLLVELVRGGMIPLLPKMEHTGPPEIMHVHLDGCI 60
Query: 395 VGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPV 454
VG I S ++E++V ++R LK+ + P+DLEVGYVPLS+GGAYPGLYLFTSP+RFVRPV
Sbjct: 61 VGSIASAKIEEVVNYLRRLKLLAHPATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPV 120
Query: 455 RNISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRT 514
+N+ L + +I+LIGPFEQ FMEIRCPDGGDGGRK FPATHEEIHPT +LSVVAN T
Sbjct: 121 KNLVSLPDGEPHIELIGPFEQAFMEIRCPDGGDGGRKEKFPATHEEIHPTAILSVVANLT 180
Query: 515 PWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDE 574
PWSDHNQSPRNMYQCQMAKQTM F Q ++ R D K +HLQTPQ+PIVRT+TY KY++DE
Sbjct: 181 PWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQSPIVRTATYKKYHMDE 240
Query: 575 YPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM 634
+P+GTNAIVAVL+YTGYDMEDAMILNKS+V+RGMF G I+QTE +DL+ + R++ +
Sbjct: 241 FPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIFQTECIDLSAK--RTENVPEI 298
Query: 635 FRKSNIEKSK---LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVA 691
F KS + K +DSDGLP VG+ + P E Y S+YN T + ++ KG+EP +DYVA
Sbjct: 299 FAKSPLSKGTGDVIDSDGLPRVGETVVPYEQYYSVYNTLTGAIRPVRLKGTEPAAIDYVA 358
Query: 692 VDVKNKK-DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDL 750
++ N K LQKVNIR R RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF TGMRPDL
Sbjct: 359 LNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDL 418
Query: 751 IINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQ 810
IINPHAFPSRMTIAMLLES+AAK GS+HG+F++ATPF SVK++ + K ++D+LG
Sbjct: 419 IINPHAFPSRMTIAMLLESIAAKAGSVHGKFIDATPFASSVKEEGEDRCKYDSIVDELGP 478
Query: 811 MLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQ 870
ML GFN+HG EV+YSG++G EL EIFIGPVYYQRLRHMVSDKFQVR+TG +DQVTRQ
Sbjct: 479 MLASYGFNHHGTEVMYSGLFGTELKFEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQVTRQ 538
Query: 871 PXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQP 930
P FGEMERD+LLAHGA+YLLHDRLHTCSDYH+ADVCSLCGS+L+ + I+
Sbjct: 539 PIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHTCSDYHVADVCSLCGSLLSATVIKS 598
Query: 931 --QKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
QK +R + G+ K K C ACQT+KGMETVAMPYVFRYLAAE AAMNIK+ L+L
Sbjct: 599 DTQKKSKRHMLGINTVKPTKNFACQACQTNKGMETVAMPYVFRYLAAELAAMNIKLDLRL 658
Query: 989 NN 990
+N
Sbjct: 659 SN 660
>Q0WLL1_ARATH (tr|Q0WLL1) DNA-directed RNA polymerase (Fragment) OS=Arabidopsis
thaliana GN=At1g29940 PE=2 SV=1
Length = 578
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/575 (73%), Positives = 490/575 (85%), Gaps = 7/575 (1%)
Query: 420 MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFME 479
+IP+DLEVGYVP SMGG+YPGLYL + P+RF+RPV+NISI S+ NI+LIGPFEQVFME
Sbjct: 1 LIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVFME 57
Query: 480 IRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFS 539
I CPDGG+GGR +S ATHEEIHPTGM+SVVAN TPWSDHNQSPRNMYQCQMAKQTMA+S
Sbjct: 58 ISCPDGGNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYS 117
Query: 540 SQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMIL 599
+Q +Q RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVLA+TG+DMEDAMIL
Sbjct: 118 TQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMIL 177
Query: 600 NKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSN--IEKSKLDSDGLPHVGQMI 657
NKSSVERGM HGQIYQTE +DL++Q SR D S+ FR+S E ++D+DGLP VGQ +
Sbjct: 178 NKSSVERGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRSTNKAEHFRIDADGLPSVGQKL 237
Query: 658 RPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVIGD 717
PDEPYCSIY+ T+ T +K+KG++PV VD+V+VD+K+KK Q+ NIRFRH RNP+IGD
Sbjct: 238 YPDEPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHPQRANIRFRHARNPIIGD 297
Query: 718 KFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSL 777
KFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAMLLES+AAKGGSL
Sbjct: 298 KFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL 357
Query: 778 HGEFVNATPFRGSVKKDNGESE-KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTC 836
HG+FV+ATPFR +VKK NGE E KS LL+DDLG ML+EKGFN++ E LYSG G EL C
Sbjct: 358 HGKFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYDTETLYSGYLGVELKC 417
Query: 837 EIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGA 896
EIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP FGEMERDSLLAHGA
Sbjct: 418 EIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA 477
Query: 897 AYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQ-PQKLPRREIGGLPPRKAPKKVICHAC 955
+YLLHDRLHT SD+HIADVCSLCGS+L +S + QK +EIG LPP + PKKV C++C
Sbjct: 478 SYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSC 537
Query: 956 QTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+TSKGMETVAMPYVFRYLAAE A+MNIKMTL+L++
Sbjct: 538 KTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 572
>I1C4E5_RHIO9 (tr|I1C4E5) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_08030 PE=3 SV=1
Length = 1150
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/999 (46%), Positives = 624/999 (62%), Gaps = 66/999 (6%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ VRNSF R Y+ IRC R DQ++LT ++YL + + F + +EYLLP +
Sbjct: 204 AIVRNSFQNRGPTYSTFGCAIRCARRDQTTLTNTIHYLTDGNVMFRFAWRKQEYLLPAML 263
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
V K+LID SD EI L C +G + DR +++ + +LFTR QCL
Sbjct: 264 VFKSLIDCSDKEIFDAL--C--------QGDTSNTFLTDRIELLLRSFKIYNLFTRDQCL 313
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
NYIGE F+ + ++ + + +A++K +FVHLD N DKFNLL FM++KL++LV G
Sbjct: 314 NYIGEKFRVTMGLDEDLTNKEIGEALVKKLIFVHLDSNRDKFNLLAFMIRKLYALVSGEC 373
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKK 237
V DNPD+ Q+QEVLL GHL T+ +KEK+ DWLQ+ K +++ DF +
Sbjct: 374 VADNPDAPQHQEVLLGGHLYTMIIKEKIYDWLQAVKMQVRTDLRINPAKVDFFNNTYFQN 433
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+ K + I + + L TG LV+ TGLDLQQ +G+T+ A++LN+ R+L+HFR +HRGA
Sbjct: 434 AYRKVNS-DIGSKLSYFLATGNLVSKTGLDLQQFSGFTIVAEKLNFFRYLAHFRCIHRGA 492
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH+ C++ I + I
Sbjct: 493 FFAELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHLAHKCKV---------INEPLDI 543
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
K +I +L G++Q L G P V+LDG IVG EK+ ++ +V+
Sbjct: 544 K-TIPRLLASLGISQSF--LHTIGRPGDNVVMLDGKIVGWCTPKTAEKVAQSLKVWRVNG 600
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
IP DLE+ +VP + GG YPGLYLF+SP+R +RPV+ + N D+IG FEQV+
Sbjct: 601 EKGIPLDLEIAHVPNTYGGEYPGLYLFSSPARMMRPVKYLG-----NGKTDMIGTFEQVY 655
Query: 478 MEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
M+I C D P TH+E PT +LS++AN+TP+SD NQSPRNMYQCQM KQT
Sbjct: 656 MDIACMD------DEVVPGVTTHQEFTPTNILSIIANQTPFSDFNQSPRNMYQCQMGKQT 709
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S HR D K+Y +Q+ QTP+VRT Y +Y +D +P G NAIVAV++YTGYDMED
Sbjct: 710 MGTPSTVFNHRTDNKMYRIQSSQTPVVRTELYNEYGLDGWPQGNNAIVAVISYTGYDMED 769
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE----KSKLDSDGLP 651
AMILNKS+ ERG +G +Y++E VDL + SR + + F I+ K+KL DGLP
Sbjct: 770 AMILNKSAHERGFGYGTVYKSEVVDLNQYRSRGEAITYRFGLDPIKGKKYKNKLGPDGLP 829
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRH 709
H+G + D+P C + ST K KG E YVD V V D +LQKV+I+ R
Sbjct: 830 HIGAHLVADDPLCCYIDESTGKDVIKKYKGPEDAYVDEVRVLGDDSGNGELQKVHIKLRI 889
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
R+PVIGDKFSSRHGQKGVCSQ +P +DMPF +GM+PD+IINPHAFPSRMTI M +ES
Sbjct: 890 TRSPVIGDKFSSRHGQKGVCSQKYPAIDMPFT-ESGMQPDVIINPHAFPSRMTIGMFVES 948
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K G+LHG ++TPF+ + D G+ L++ G+NYHG E +YSG+
Sbjct: 949 IAGKAGALHGIAQDSTPFK---------FNEQNTAADYFGEQLKKAGYNYHGNEAMYSGI 999
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G+E+ +I+IG VYYQRLRHMV+DKFQVR+TG V +T QP FGEMERD
Sbjct: 1000 TGEEMKMDIYIGVVYYQRLRHMVNDKFQVRTTGPVHNLTMQPVKGRKRHGGIRFGEMERD 1059
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKK 949
SLLAHG +YLL DRL CSDY A VC LCGS+ + + + + L R+ +
Sbjct: 1060 SLLAHGTSYLLQDRLMNCSDYSQAYVCRLCGSLAS-------PICTKIVSSLGNRRTYE- 1111
Query: 950 VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
C C TSKG++ +A+PYVFRYL E +M I++ L +
Sbjct: 1112 --CRTCNTSKGIDLIAIPYVFRYLTTELMSMGIRLNLGI 1148
>I1CPV4_RHIO9 (tr|I1CPV4) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_15195 PE=3 SV=1
Length = 1150
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/999 (46%), Positives = 625/999 (62%), Gaps = 66/999 (6%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +RNSF R Y+ IRC R DQ++LT ++YL + + F + +EYLLP +
Sbjct: 204 AIIRNSFQNRGPTYSTFGCAIRCARRDQTTLTNTIHYLTDGNVMFRFAWRKQEYLLPAML 263
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
V K+LID SD EI L C +G + DR +++ + +LFTR QCL
Sbjct: 264 VFKSLIDCSDKEIFDAL--C--------QGDTSNTFLTDRIELLLRSFKIYNLFTRDQCL 313
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
NYIGE F+ + ++ + + +A++K +FVHLD N DKFNLL FM++KL++LV G
Sbjct: 314 NYIGEKFRVTMGLDEDLTNKEIGEALVKKLIFVHLDSNRDKFNLLAFMIRKLYALVSGEC 373
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVKK 237
V DNPD+ Q+QEVLL GHL T+ +KEK+ DWLQ+ K +++ DF +
Sbjct: 374 VADNPDAPQHQEVLLGGHLYTMIIKEKIYDWLQAVKMQVRTDLRINPAKVDFFNNTYFQN 433
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+ K + I + + L TG LV+ TGLDLQQ +G+T+ A++LN+ R+L+HFR +HRGA
Sbjct: 434 AYRKVNS-DIGSKLSYFLATGNLVSKTGLDLQQFSGFTIVAEKLNFFRYLAHFRCIHRGA 492
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH+ C++ I + +
Sbjct: 493 FFAELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHLAHKCKV---------INEPLDV 543
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
K +I +L G++Q L G P V+LDG IVG EK+ ++ +V+
Sbjct: 544 K-AIPRLLASLGISQSF--LHTIGRPGDNVVMLDGKIVGWCTPKTAEKVAQSLKVWRVNG 600
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
IP DLE+ +VP + GG YPGLYLF+SP+R +RPV+ + N D+IG FEQV+
Sbjct: 601 EKGIPLDLEIAHVPNTYGGEYPGLYLFSSPARMMRPVKYLG-----NGKTDMIGTFEQVY 655
Query: 478 MEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
M+I C D P TH+E PT +LS++AN+TP+SD NQSPRNMYQCQM KQT
Sbjct: 656 MDIACMD------DEVVPGVTTHQEFTPTNILSIIANQTPFSDFNQSPRNMYQCQMGKQT 709
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S HR D K+Y +Q+ QTP+VRT Y +Y +D +P G NAIVAV++YTGYDMED
Sbjct: 710 MGTPSTVFNHRTDNKMYRIQSSQTPVVRTELYNEYGLDGWPQGNNAIVAVISYTGYDMED 769
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE----KSKLDSDGLP 651
AMILNKS+ ERG +G +Y++E VDL + SR + + F I+ K+KL DGLP
Sbjct: 770 AMILNKSAHERGFGYGTVYKSEVVDLNQYRSRGEAITYRFGLDPIKGKKYKNKLGPDGLP 829
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRH 709
H+G + D+P C + ST K KG E YVD V V D +LQKV+I+ R
Sbjct: 830 HIGAHLVADDPLCCYIDESTGKDVIKKYKGPEDAYVDEVRVLGDDSGNGELQKVHIKLRI 889
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
R+PVIGDKFSSRHGQKGVCSQ +P +DMPF +GM+PD+IINPHAFPSRMTI M +ES
Sbjct: 890 TRSPVIGDKFSSRHGQKGVCSQKYPAIDMPFT-ESGMQPDVIINPHAFPSRMTIGMFVES 948
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K G+LHG ++TPF+ + D G+ L++ G+NYHG E +YSG+
Sbjct: 949 IAGKAGALHGIAQDSTPFK---------FNEQNTAADYFGEQLKKAGYNYHGNEAMYSGI 999
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G+E+ +I+IG VYYQRLRHMV+DKFQVR+TG V +T QP FGEMERD
Sbjct: 1000 TGEEMKMDIYIGVVYYQRLRHMVNDKFQVRTTGPVHNLTMQPVKGRKRHGGIRFGEMERD 1059
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKK 949
SLLAHG +YLL DRL CSDY A VC LCGS+ + + + + L R+ +
Sbjct: 1060 SLLAHGTSYLLQDRLMNCSDYSQAYVCRLCGSLAS-------PICTKIVSSLGNRRTYE- 1111
Query: 950 VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
C +C TSKG++ +A+PYVFRYL E +M I++ L +
Sbjct: 1112 --CRSCNTSKGIDLIAIPYVFRYLTTELMSMGIRLNLGI 1148
>F4P3R2_BATDJ (tr|F4P3R2) DNA-directed RNA polymerase OS=Batrachochytrium
dendrobatidis (strain JAM81 / FGSC 10211)
GN=BATDEDRAFT_30022 PE=3 SV=1
Length = 1147
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/1014 (45%), Positives = 621/1014 (61%), Gaps = 80/1014 (7%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +R SF +R Y+ +++RCV DQS+ T+ ++Y + L F+ K EY++PV +
Sbjct: 187 AIIRPSFQKRGPTYSKFGIIMRCVLPDQSAQTITMHYCTDGEVTLRFFHKKIEYMVPVVL 246
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCL 121
V++AL +TSD EI + G + DR +++ R+ +++ Q L
Sbjct: 247 VMRALCNTSDFEIFERII----------MGVYTNTFLIDRVELLLRSFRRYAIYNSTQAL 296
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
YIG F +L ++ L+ + VHL D KF+LLI+MLQKL+SLV G +
Sbjct: 297 AYIGSKFAVMLDSPEDQLEVDAGLEFLRRMILVHLTDAKSKFDLLIYMLQKLYSLVSGDT 356
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFDFSEIFVVKK 237
DNPDSLQ QE LL GH+ + +KEKL DWL + K ++K++ DFS+ ++K
Sbjct: 357 APDNPDSLQFQETLLAGHMFSALIKEKLADWLLAIKTTINMDIKKQISKLDFSDKKYIQK 416
Query: 238 CFDKTPARA-ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
F KT + I IE L TG L++++ LDLQQ +GYT+ A++LN+ R++SHFR++HRG
Sbjct: 417 LFSKTSGMSDIGKKIEYFLATGNLISSSNLDLQQVSGYTIIAEKLNFYRYISHFRSIHRG 476
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ TC I + D K
Sbjct: 477 AFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHTCEI--FLD---------K 525
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
I +S + +V + + V+T+ LDG ++G + V I +R+ K+
Sbjct: 526 IDVSHIPSIVAAAEFDSRENI-------VMTIQLDGKVIGWGRTSVVRNIAQTLRDWKIR 578
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P LE+GYVP + GG YPGL+LF+SP+R +RPV+ ++ + D IGPFEQV
Sbjct: 579 GINNVPLKLEIGYVPPTKGGQYPGLFLFSSPARMIRPVKYLA-----TGDTDFIGPFEQV 633
Query: 477 FMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
+M+I C ++ P TH+E +PT MLSVVAN TP+SD NQSPRNMYQCQM KQ
Sbjct: 634 YMDIACM------KEDVVPGITTHQEFNPTDMLSVVANLTPFSDFNQSPRNMYQCQMGKQ 687
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
+M SQ++ HR D KLY LQT Q+PIVR + + Y +D YP G NA+V V++YTGYDME
Sbjct: 688 SMGTPSQSLHHRTDNKLYRLQTGQSPIVRPNLHNDYGLDGYPNGMNAVVCVISYTGYDME 747
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF-------RKSNIEKSKL-- 645
DA I+ KSS ERG +G +Y+ E VDL++ + D + F + N+ + L
Sbjct: 748 DASIIAKSSHERGYGYGTVYKGEWVDLSDFHRQGDIVTHYFGFVAWNESEPNLSEKALAR 807
Query: 646 -----DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKK 698
D DGLP +G + +P + + T + KG E YVD V + D KK
Sbjct: 808 ALQFIDLDGLPIIGVRLTRGDPMYAFVDDVTGKVTVKEYKGMEDAYVDQVRLIGDDSGKK 867
Query: 699 DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
LQK++IR R PR P+IGDKFSSRHGQKGV SQ WP +DMPF +G+ PD+IINPHAFP
Sbjct: 868 PLQKIHIRLRIPRPPLIGDKFSSRHGQKGVISQKWPSIDMPFS-ESGIIPDVIINPHAFP 926
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI M +ES+A K G+LHG +ATPF+ + E +G D G+ LR+ GFN
Sbjct: 927 SRMTIGMFIESLAGKAGALHGYAQDATPFKFN------EDHAAG---DFFGEELRQAGFN 977
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
YHG E +YSG+ G+E +I+IG VYYQRLRHMVSDK+QVR+TG V +T+QP
Sbjct: 978 YHGNEPMYSGITGQEFKADIYIGVVYYQRLRHMVSDKYQVRTTGPVHNLTQQPVKGRKRA 1037
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
FGEMERDSLLAHG +YLL DRL CSDY VCS+CGS+L Q+ R
Sbjct: 1038 GGIRFGEMERDSLLAHGVSYLLKDRLMNCSDYSQCHVCSICGSILGPI----QRRADRSD 1093
Query: 939 GGLPPRKAP--KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
G P R P + V C C T+KG+E +A+PYVFRYL E AMNI++ L + +
Sbjct: 1094 G--PERFEPIGRTVECLTCNTNKGIEVIAIPYVFRYLCTELVAMNIRLRLDIQH 1145
>C1MLF5_MICPC (tr|C1MLF5) DNA-directed RNA polymerase OS=Micromonas pusilla (strain
CCMP1545) GN=MICPUCDRAFT_55696 PE=3 SV=1
Length = 1198
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/1019 (45%), Positives = 629/1019 (61%), Gaps = 66/1019 (6%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R +F+ R YT A IRCV D+ S TV+L+YL SARL F + +EY LP+G+V
Sbjct: 215 RAAFTSRGYLYTPFATAIRCVSPDEHSCTVRLHYLTGGSARLAFIHRRQEYFLPLGLVFI 274
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL + SD E++ + S G GA +R M++EE+ L + TR Q L+Y+
Sbjct: 275 ALCEVSDKELQDVVCSGV-----PGPGA--HVFASERVAMVLEEIHTLGIQTRSQALSYL 327
Query: 125 GEHFQPILTELKNDSYDT---VAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTS 181
G F+ L DS++T + K +++D+VF+HL DKFNLL+ MLQKL++LV G
Sbjct: 328 GICFR---ERLNADSWETNIDIGKRIIRDHVFIHLATCSDKFNLLVLMLQKLYALVTGQC 384
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFDFSEIFVVKK 237
DNPDSL + EVLLPG L+ ++++E+L + L KD E + + T D ++ +
Sbjct: 385 SQDNPDSLMHHEVLLPGILLQMFMREQLSEALIKVKDTILREFEGQPQTMDLNDRERILS 444
Query: 238 CFDKTPARA-ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ R + E L TG LV+ TGL L Q +G+T+ AD+LNY+R+LSHFR++HRG
Sbjct: 445 LVVGSIGRIDLGRMAEYFLATGNLVSKTGLGLSQTSGFTIVADKLNYVRYLSHFRSIHRG 504
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTC--RITSYFDSQGSIKDY 354
A +A LRTTTVRKLLP+SWGFLCPVHTPDG PCGLLNH+T +C I+ + +
Sbjct: 505 AYYAELRTTTVRKLLPDSWGFLCPVHTPDGSPCGLLNHLTASCFVHISDGQNRGLEMAAI 564
Query: 355 FKIKISILDILVDSGM--TQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
F+I +S + +L+ +G + P +L+P V LDG +VG + + + K+VA +R
Sbjct: 565 FRI-LSSVGVLITTGRLRSTSAPHVLIP-------VTLDGVMVGFMRAADSAKVVATLRS 616
Query: 413 LKVSSSAMIPDDLEVGYVPLSM---GGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDL 469
KVS +P LEV Y+P + GGA+PGLYLFTS SR +RPVR ++ EN
Sbjct: 617 AKVSEPPKVPPSLEVVYIPTLVNRSGGAFPGLYLFTSSSRLMRPVRQLASGFIEN----- 671
Query: 470 IGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
I EQ FM I+CPDG GG + THEE + MLSV+A+ TPWSD+NQSPRNMYQC
Sbjct: 672 ISSLEQAFMSIKCPDGSSGGSEE-LVFTHEESNAKAMLSVIASCTPWSDYNQSPRNMYQC 730
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QMAKQTM +R D KLY LQ+PQ PI T +Y +Y+IDEYP GTNA++AVLAYT
Sbjct: 731 QMAKQTMGLPLHAFCYRPDTKLYRLQSPQRPIAVTESYDEYSIDEYPLGTNAVIAVLAYT 790
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSKLDSDG 649
GYDMEDAMI++K S+ERG H +Y+TET+ L GS R ++E + L+ DG
Sbjct: 791 GYDMEDAMIVSKGSMERGFSHATLYKTETLSLV-TGSGKVFGHFDLRSHSLEGT-LNIDG 848
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIR 706
P VG +I P S+ + T TH K KG++ VD V+V + K+ +
Sbjct: 849 SPSVGSIIEPGSALASVVDRITGQTHVHKAKGTDQAIVDRVSVIQTSLSRGIRSTKMALS 908
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R+ RNP+IGDKFSSRHGQKGV S LWP+ +P+ TG+RPD+IINPHAFPSRMTI ML
Sbjct: 909 LRYNRNPIIGDKFSSRHGQKGVLSFLWPEESLPYVERTGIRPDIIINPHAFPSRMTIGML 968
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A+K G+L G +NA+PF+ + K+ + + G+ LR+ G++Y G E +
Sbjct: 969 VESMASKSGALDGACINASPFKAAQKEKTYSPPAA-----EYGETLRKHGYDYCGSETMV 1023
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
+G+ G+ +I+IG VYYQRLRHMVSDKFQVRS G + +T+QP FGEM
Sbjct: 1024 NGLTGEAFGVDIYIGLVYYQRLRHMVSDKFQVRSVGPNNSLTQQPTKGRKSGGGIRFGEM 1083
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG-----GL 941
ERD+LLAHGAAYL+HDRLH CSD + VCS CGS+LA S KL +G G
Sbjct: 1084 ERDALLAHGAAYLIHDRLHACSDRFVTHVCSNCGSILAPSL----KLSVAGMGSGSALGC 1139
Query: 942 PPRKA--------PKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNNGA 992
K + + C C ++ V +P+VF+YLA+E AAMNI++ + + GA
Sbjct: 1140 SAGKTLHTSCDGESEGITCRVCNRRTKIDKVELPFVFKYLASELAAMNIRIGIGIQCGA 1198
>D8RUX1_SELML (tr|D8RUX1) DNA-directed RNA polymerase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_101823 PE=3 SV=1
Length = 692
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/731 (56%), Positives = 506/731 (69%), Gaps = 58/731 (7%)
Query: 273 GYTVQADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLL 332
G++V A++LN+ RF+SHFR+VHRGA FA RTT+VRKLLPESWGFLCPVHTPDGEPCGLL
Sbjct: 2 GFSVVAEKLNFFRFISHFRSVHRGAFFARQRTTSVRKLLPESWGFLCPVHTPDGEPCGLL 61
Query: 333 NHMTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDG 392
H++ C+I++ D KD I +I +L GM + P L L GPP+ L VLLDG
Sbjct: 62 THLSSLCKISTDLDQNNHPKDPKVIHRTIATVLAQLGMVSISPLLALSGPPKYLAVLLDG 121
Query: 393 CIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVR 452
C++G +P G + + V P DLE+GYVP + GAYPGL+L+T+PSRF+R
Sbjct: 122 CVLGYMPVGNIPQTV--------------PIDLEIGYVPCTYAGAYPGLFLYTTPSRFLR 167
Query: 453 PVRNISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRK-SSFPATHEEIHPTGMLSVVA 511
P +MEI CPDGG+ GR S+ PATH E+HPT MLSVVA
Sbjct: 168 PA----------------------YMEIACPDGGNCGRTPSAPPATHIELHPTAMLSVVA 205
Query: 512 NRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYN 571
+ TPWSDHNQSPRNMYQCQM KQT+ F+SQ ++ R D K+Y+LQ PQ+P+ R Y KYN
Sbjct: 206 SLTPWSDHNQSPRNMYQCQMGKQTLGFASQALKFRTDHKMYNLQNPQSPVARNVNYKKYN 265
Query: 572 IDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPS 631
+DE+P GTNA+VAVLAYTG+DMEDAMI+NKSS+ERG+ HGQIY+TE VDL+ +SD
Sbjct: 266 MDEFPLGTNAVVAVLAYTGFDMEDAMIMNKSSMERGLAHGQIYKTEHVDLSLLQKKSDGI 325
Query: 632 SRMFR----KSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYV 687
+F K NI + LD DGLPH+GQ + +PYCS+ N T K K +E V +
Sbjct: 326 VNLFSRPTGKRNIH-NFLDVDGLPHIGQTMHNGDPYCSVLNTMTGDAKLHKLKAAENVVI 384
Query: 688 DYVAVDVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMR 747
D V + LQK+ ++FRH RNPVIGDKFSSRHGQKG+ SQLWPD+DMPF TGMR
Sbjct: 385 DSVIAIGHGRDPLQKIAVKFRHDRNPVIGDKFSSRHGQKGILSQLWPDIDMPFSAVTGMR 444
Query: 748 PDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGL---- 803
PD+IINPHAFPSRMTI ML+ES+AAK G L GE+V++TPFR S + K+G
Sbjct: 445 PDIIINPHAFPSRMTIGMLMESMAAKAGVLRGEYVDSTPFRSSSAALEAKDGKTGSGYKG 504
Query: 804 ------LLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQ 857
+ + G+ L + GFNYHG EV+YSG+ G ELTCEIFIG VYYQRLRHMVSDKFQ
Sbjct: 505 KDKHYPAISEFGEQLAQHGFNYHGTEVMYSGLLGTELTCEIFIGVVYYQRLRHMVSDKFQ 564
Query: 858 VRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 917
VRS G ++ VTRQP FGEMERDSLLAHGAAYLLHDRLHT SDYH+ DVC+
Sbjct: 565 VRSLGAINPVTRQPVGGRKLGGGIRFGEMERDSLLAHGAAYLLHDRLHTSSDYHVGDVCT 624
Query: 918 LCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEF 977
CGS+L+T + P K P +G R PKK C CQ++ G+ VAMP+VFRYLAAE
Sbjct: 625 TCGSLLSTLMV-PSKQP--AVGA---RNKPKKATCKVCQSNAGVVKVAMPFVFRYLAAEL 678
Query: 978 AAMNIKMTLKL 988
AAMN+K+TLK+
Sbjct: 679 AAMNVKLTLKV 689
>K5XAJ1_PHACS (tr|K5XAJ1) DNA-directed RNA polymerase OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_115318 PE=3 SV=1
Length = 1224
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1050 (44%), Positives = 637/1050 (60%), Gaps = 106/1050 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SF+ R YT AV IRCVR DQ+S+T L+YL N SA L F + +EY++P+
Sbjct: 218 ISLIRPSFTNRGPSYTPHAVQIRCVRPDQTSVTNTLHYLSNGSATLRFSWRKQEYVIPIM 277
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + ++YE + DR M++ + SL+T QC
Sbjct: 278 LILKALVGVSDKEI---FEGVMMQEYED-------TFLTDRVEMLLRSFKAYSLYTGDQC 327
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G F+ +L ++ + + ++ V VHLD DKF +L+FML+KLF++V G+
Sbjct: 328 LEYLGNKFRVVLGMPEDWTNKALGTWLVDKLVLVHLDSPRDKFRMLLFMLRKLFAVVSGS 387
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLED----WLQSGKDEMKRKSGTFDFSEIFVVK 236
+DNPDS Q+QEVLLPG L + +KE+LE+ +++S + +++R + DF + +K
Sbjct: 388 CSVDNPDSPQHQEVLLPGALYGMIIKERLEEALNNFVRSIQIDVQRDEPSVDFFDKRYIK 447
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K K I + N L TG LV+ +GLDLQQ +G+T+ A++LN+LR++SHFR++HRG
Sbjct: 448 KMLQKI-NYEIGARMSNFLATGNLVSASGLDLQQASGFTIVAEKLNWLRYISHFRSIHRG 506
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI + + I
Sbjct: 507 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTQPLAVAHIPA--- 563
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+LV GMTQ L+ L + LDG ++G P +++ +R K
Sbjct: 564 -------LLVSHGMTQAFSTLV--DGRRNLCIQLDGRVIGWAPQNTAQRLATSLRIWKTE 614
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P DLE+GYVP S GG YPGLYLF+S SR +RPV+ +S N D IG FEQV
Sbjct: 615 GKHNVPLDLEIGYVPTSQGGQYPGLYLFSSRSRMMRPVKYLS-----NGRNDQIGSFEQV 669
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M I C P+ + G S H E PT LS++AN TP+SD NQSPRN+YQCQM KQ+
Sbjct: 670 YMNIACTPEEIEKGVFS-----HVEHKPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQS 724
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S T++HR D KLY LQT Q+P+VR + + Y +D +P GTNAIVAV++YTGYDMED
Sbjct: 725 MGTPSTTLRHRTDNKLYRLQTGQSPVVRPALHDTYGMDSFPNGTNAIVAVISYTGYDMED 784
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFR--------KSNIEKSK--- 644
AMILNKS+ ERG +G +Y+++ +DL + RS SS K+ +K+
Sbjct: 785 AMILNKSAHERGFGYGTVYKSQIIDLKDLQGRSASSSAPTLHFGFGYDIKTEGDKAHSCC 844
Query: 645 --LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--L 700
LD DGLP+VG + P +P + + +T T +K KG E YVD V + + D L
Sbjct: 845 EFLDLDGLPYVGTRLNPGDPIAAYIDDTTGRTRFVKYKGDETAYVDTVRLLGSDAGDQEL 904
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
QKV+I R R PVIGDKFSSRHGQKGVCSQ WP +DMPF +GM+PD+IINPHAFPSR
Sbjct: 905 QKVHITLRITRAPVIGDKFSSRHGQKGVCSQKWPMIDMPFT-ESGMQPDVIINPHAFPSR 963
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI ML+ES+A K G++HG +ATPF+ + ++D +D G L G+NY+
Sbjct: 964 MTIGMLVESMAGKAGAMHGLAQDATPFQFT-EEDTA--------VDYFGDQLLAAGYNYY 1014
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD VTRQP
Sbjct: 1015 GNEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTRQPVKGRKRAGG 1074
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--IQPQKLPRREI 938
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + + ++
Sbjct: 1075 IRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDVSLGEMVIGTS 1134
Query: 939 GGLPPRKAPKKVICHACQ--------------------------------------TSKG 960
G L P P C C+ +SKG
Sbjct: 1135 GKLKP-TGPGGEYCRVCRAAAEEEEERERKALATGQNASKQNGLKVAIASQQMLGPSSKG 1193
Query: 961 --METVAMPYVFRYLAAEFAAMNIKMTLKL 988
++ VA+PYVFRYL AE AAM I ++L++
Sbjct: 1194 GDLDIVAIPYVFRYLCAELAAMGINISLEV 1223
>C1FDM4_MICSR (tr|C1FDM4) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=ACR2 PE=3 SV=1
Length = 1192
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1032 (43%), Positives = 625/1032 (60%), Gaps = 72/1032 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M R ++S R YT A IRC D+ + TV+++Y + SARL F + +EY +P G
Sbjct: 188 MGMKRKAYSSRGPIYTHYATAIRCSANDEHTSTVRIHYTSDGSARLVFVHRRKEYFVPAG 247
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD-DRARMIIEEVRQLSLFTRLQ 119
I+L+AL + SD S +G +G Q +R R+I+ E + ++Q
Sbjct: 248 IILRALAEFSD--------SVVQAIVARGLTGLGAQVFAIERIRIILGEAATFGIHNKVQ 299
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+GEHF+ L ++ V K ++ +++F+HL + DKFNL++ M+QKL++LV G
Sbjct: 300 ALAYLGEHFRAQLDANPWETNFDVGKRLICEHIFIHLQSDEDKFNLVLLMMQKLYALVAG 359
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRK------SGTFDFSEIF 233
DNPDSL + E+LLPG L+ ++++EKL+D L K + R+ + D E +
Sbjct: 360 QCSADNPDSLMHHEILLPGILMQIFVREKLQDALHKAKIALNREFEENPNHASADDGE-W 418
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + + I E L TG L + TGL L Q +G+T+ AD+LNY+R++SHFR+V
Sbjct: 419 LSQVAIEAITKTNIGRLAEYFLATGNLSSRTGLGLTQTSGFTIVADKLNYMRYISHFRSV 478
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRGA FA LRTTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ +C I +S G +D
Sbjct: 479 HRGAYFAELRTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAASCYIHVACESTGEARD 538
Query: 354 YFKIKISILDILVDSGMTQLVPKLLL-PGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
+ + +L +L +G L L PP LTV+LDG I+G + + + +V+ +R
Sbjct: 539 --RARSQVLKVLSSAGALILHGSTSLGSAPPAHLTVMLDGLILGFVADSDAKVVVSALRA 596
Query: 413 LKVSSSAMIPDDLEVGYVPLS---MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDL 469
KVS S + LE+ ++PLS GGA+PGLYLF++ SR +RPV + +N+ +
Sbjct: 597 AKVSGSNGVSSHLEIAHIPLSSCGYGGAFPGLYLFSTSSRMMRPV-----IQQQNRITEN 651
Query: 470 IGPFEQVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
IG EQ FM IRCPDG +K + A HEE P +LSVVA+ TPWSD NQSPRNMY
Sbjct: 652 IGSLEQAFMSIRCPDGR---QKPTCIAEHAHEENGPGTILSVVASLTPWSDFNQSPRNMY 708
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQMAKQTM + +R D K+Y L TPQ P+ T Y KY +D YP GTNA+VAV+A
Sbjct: 709 QCQMAKQTMGMPLHSFCYRPDTKIYRLHTPQRPVAMTGQYDKYQMDNYPLGTNAVVAVIA 768
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSKL-- 645
+TGYDMEDAMI+NK ++ERG+ H +Y+TETV L S F + N+ + KL
Sbjct: 769 HTGYDMEDAMIVNKGAMERGLGHATLYKTETVTLVAG------SDENFGQCNVIQQKLGS 822
Query: 646 --------------DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVA 691
D+DG P G + + CS+ + ST K KGS+ V +D V+
Sbjct: 823 PIAFTEKHPFDPDIDTDGAPRPGSIKQAGSTLCSVVDRSTGRVRLHKIKGSDHVIIDRVS 882
Query: 692 VDVKNKKDLQ---KVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRP 748
+ Q K+++ R RNP+IGDKFSSRHGQKGV S L P+ D+P+ +G RP
Sbjct: 883 ISSGKASKGQTETKMSVTVRCDRNPIIGDKFSSRHGQKGVLSFLCPEEDLPYIEKSGSRP 942
Query: 749 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDL 808
D++INPHAFPSRMTI MLLES+A+K G+L G F++A+PF+ + + + S +
Sbjct: 943 DILINPHAFPSRMTIGMLLESMASKAGALDGRFIDASPFQAANDETHIISPTR-----EY 997
Query: 809 GQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVT 868
G+MLR+ G+NY G E + +G+ G+ +IF+G VYYQRLRHMVSDKFQVRS G + +T
Sbjct: 998 GEMLRKHGYNYSGSETMVNGLTGERFDVDIFVGLVYYQRLRHMVSDKFQVRSLGPNNPLT 1057
Query: 869 RQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLA-TSF 927
+QP FGEMERD+L+AHG++YL+HDRLH CSD H+ +C+ CGS+LA +
Sbjct: 1058 QQPIKGRKAGGGIRFGEMERDALIAHGSSYLIHDRLHACSDRHVTSLCTYCGSLLAPGAN 1117
Query: 928 IQPQKLPRREIGGLPPRKA---------PKKVICHACQTSKGMETVAMPYVFRYLAAEFA 978
IQ + G + P+KV C C T G+ VA+P+VF+YLAAE A
Sbjct: 1118 IQMAATHQVHASGAGNGQGRLHSFDDIFPRKVSCRVCNTGTGVHNVALPFVFKYLAAELA 1177
Query: 979 AMNIKMTLKLNN 990
AMNI++ L++ +
Sbjct: 1178 AMNIRIGLEVGD 1189
>R7T1L0_DICSQ (tr|R7T1L0) Beta and beta-prime subunits of DNA dependent
RNA-polymerase OS=Dichomitus squalens (strain LYAD-421)
GN=DICSQDRAFT_58947 PE=4 SV=1
Length = 1230
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1060 (44%), Positives = 635/1060 (59%), Gaps = 122/1060 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S VR SF R YT AV IRCVR DQ+ +T L+YL N SA L F + +EY++P+
Sbjct: 220 ISLVRPSFVNRGPSYTPYAVQIRCVRPDQTGVTNTLHYLSNGSAMLRFSWRKQEYVIPIM 279
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + + YE + DR +++ + SL+T QC
Sbjct: 280 LILKALVSASDKEI---FEGVMMQDYED-------TFLSDRVELLLRSFKMYSLYTGDQC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ ++ ++ + + ++ V VHL + DKF +L+FML+KLF+LV +
Sbjct: 330 LQYLGDKFRVVVNMPEDWTNQAIGVWLINKVVLVHLQNPRDKFRMLLFMLRKLFALVSKS 389
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFDFSEIFVVK 236
+DNPDS Q+QEVLLPG L + +KE+LE+ L S ++ +++ + DF + +K
Sbjct: 390 CSVDNPDSPQHQEVLLPGTLYGMIIKERLEEALNSFREGIALDVRNSNPAVDFFDKRYIK 449
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K +T + I + N L TG LV+ TGLDLQQ +G+T+ A++LN++R++SHFR++HRG
Sbjct: 450 KVLSRT-SYDIGAKMSNFLATGNLVSPTGLDLQQASGFTIVAEKLNWMRYISHFRSIHRG 508
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI +
Sbjct: 509 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTS-----------P 557
Query: 357 IKISILDILVDS-GMTQLVPKLLLPGPPEV-----LTVLLDGCIVGCIPSGEVEKIVAHI 410
+ ++ L L+ + GMTQ P V L V LDG ++G PS +++ +
Sbjct: 558 LAVAHLPALLAAHGMTQAFA-------PSVDGRRNLCVQLDGRLIGWAPSAVCKQLATSL 610
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R K +P DLE+G+VP+S GG YPGLYLF+S SR +RPV+ ++ N D +
Sbjct: 611 RIWKTEGKHSVPLDLEIGFVPVSKGGQYPGLYLFSSRSRMMRPVKYLA-----NGRDDQV 665
Query: 471 GPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
G FEQV+M+I C P + G +TH E PT LS++AN TP+SD NQSPRN+YQC
Sbjct: 666 GSFEQVYMDIACTPAEIEDGV-----STHVEHAPTNFLSILANLTPFSDFNQSPRNIYQC 720
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QM KQTM + +QHR D KLY LQT QTP+VR + + Y +D +P GTNAIVAV++YT
Sbjct: 721 QMGKQTMGTPATALQHRTDNKLYRLQTGQTPVVRPALHNTYGMDSFPNGTNAIVAVISYT 780
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTE-QGSRSD-----------PSSRMFRK 637
GYDMEDAMILNKS+ ERG +G +Y+ TVDL E GSR P RM
Sbjct: 781 GYDMEDAMILNKSAHERGFGYGTVYKAYTVDLQELTGSRRQTGPPTLHFGVGPEIRMEEG 840
Query: 638 SNIEKSK--LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVK 695
N + +D+DGLP VG + P +P + + +T T +K KG E YVD V +
Sbjct: 841 PNQHAAAKLVDADGLPIVGSRLNPGDPIAAYVDDTTGRTKFVKYKGDEVAYVDTVRLLGS 900
Query: 696 NKKD--LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIIN 753
+ D LQK+NI R R PVIGDKFSSRHGQKGVCSQ WP +DMPF +GM+PD+IIN
Sbjct: 901 DAGDQELQKINITLRITRAPVIGDKFSSRHGQKGVCSQKWPAIDMPFT-ESGMQPDVIIN 959
Query: 754 PHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLR 813
PHAFPSRMTI ML+ES+A K G++HG +ATPF+ + ++D +D G+ L
Sbjct: 960 PHAFPSRMTIGMLVESMAGKAGAMHGLAQDATPFQFT-EEDTA--------IDYFGEQLV 1010
Query: 814 EKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXX 873
G+NY+G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+ G VD VTRQP
Sbjct: 1011 AAGYNYYGNEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTIGPVDPVTRQPVK 1070
Query: 874 XXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKL 933
FGEMERD+L+AHG A+LL DRL CSDY A VC CGS+++ + L
Sbjct: 1071 GRKRAGGIRFGEMERDALIAHGTAFLLQDRLMNCSDYSTAWVCRTCGSLISLGY-DDVTL 1129
Query: 934 PRREIG--GLPPRKAPKKVICHACQ----------------------------------- 956
IG G+ P C C+
Sbjct: 1130 GEMVIGASGMLKPTGPGGEYCRVCRAAAEEEETRARQALATGQASATANGHADVRVQIPS 1189
Query: 957 ------TSKG--METVAMPYVFRYLAAEFAAMNIKMTLKL 988
SKG M+ +A+PYVFRYL AE A+M IK++L++
Sbjct: 1190 QHILGPASKGGDMDIIAVPYVFRYLCAELASMGIKVSLEV 1229
>J3PQ51_PUCT1 (tr|J3PQ51) DNA-directed RNA polymerase OS=Puccinia triticina
(isolate 1-1 / race 1 (BBBD)) GN=PTTG_01267 PE=3 SV=1
Length = 1213
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1037 (44%), Positives = 619/1037 (59%), Gaps = 98/1037 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SF R YT A IRCVR DQ+S T L+YL N + F + EY++PV
Sbjct: 221 ISLIRPSFVNRGNFYTTYATQIRCVRPDQTSQTNTLHYLSNGTITFRFSWRKNEYMIPVV 280
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
++LKAL SDLEI TNL ++ + + + DR +++ + SL T+
Sbjct: 281 MLLKALTGASDLEIFTNLAQNAFEDTFRT-----------DRIELMLRNFQHYSLPTQSA 329
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
CL+++G F+ +L+ + + + + +L+ V VHL D K+ LL+FM+QKL++LV G
Sbjct: 330 CLDFLGSKFKVVLSCPDDWGSEQIGRYLLQRIVLVHLKDPISKYRLLLFMIQKLYALVAG 389
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVV 235
DNPDS Q+QE+LLPGHL++ LKE+ E++L + +E+++ + FS+ V
Sbjct: 390 ECCADNPDSPQHQEILLPGHLVSAILKERFEEYLSGIQIQIANEVRKSTTGVTFSDNKFV 449
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
K K + I I L TG LV+ TGLDLQQ +G+T+ A++LN+ R++SHFR VHR
Sbjct: 450 TKAMGKVYSD-IGRRITFFLATGNLVSPTGLDLQQTSGFTIIAEKLNFYRYISHFRCVHR 508
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH C+I + S S+K+
Sbjct: 509 GAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHKCKILT---SAPSVKN-- 563
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
I +L+ GM+Q + P + ++V LDG I+G S ++ +R K
Sbjct: 564 -----IPPLLLSMGMSQPFDTTIHPS--KFVSVQLDGQIIGWASSSLCSRMATALRTWKT 616
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
IP +LE+G VP S GG YPGL+LF++P+R +RPV+ +S NK DL+G FEQ
Sbjct: 617 EGLESIPLELEIGLVPRSKGGQYPGLFLFSTPARMMRPVQLLS-----NKKTDLVGSFEQ 671
Query: 476 VFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V+M+I C P+ D G +TH EI PT +LS++AN TP+SD NQSPRNMYQCQM+KQ
Sbjct: 672 VYMDIACSPEEIDPGF-----STHVEISPTHVLSLLANLTPFSDFNQSPRNMYQCQMSKQ 726
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM S I HR D KLY LQT QTPIVR + + Y +D +P GTNA+VAV++YTGYDME
Sbjct: 727 TMGTPSGVIHHRTDNKLYRLQTGQTPIVRPALHDVYQMDHFPNGTNAVVAVISYTGYDME 786
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS----------K 644
DAMILNKS+ ERG HG +Y++ VDL +GSR ++ S K
Sbjct: 787 DAMILNKSAHERGFAHGTVYKSLIVDLAPEGSRMKTEKHFGIGNSFGSSETSAFSRMCEK 846
Query: 645 LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQK 702
LDSDG+ VG +R +P C+ + + T K KG E +V+ V + + K+ K
Sbjct: 847 LDSDGIVMVGSRVRSGDPLCAYVDRTNGKTSFEKYKGDEEAFVEEVRIIGGEVSSKECTK 906
Query: 703 VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
++ + R PR+PVIGDKFSSRHGQKGVCSQ WP +DMPF +G++PD+IINPHAFPSRMT
Sbjct: 907 IHFKLRVPRSPVIGDKFSSRHGQKGVCSQKWPSIDMPF-SESGIQPDVIINPHAFPSRMT 965
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGL 822
I M +ES+A K G++HG +ATPFR N + S G+ LR G+NYHG
Sbjct: 966 IGMFVESLAGKAGAMHGIAQDATPFRF-----NEQDTPSAY----FGEQLRAAGYNYHGN 1016
Query: 823 EVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXX 882
E +YSG+ GKE +I+IG VYYQRLRHMV DK+QVR+TG VD++TRQP
Sbjct: 1017 EPMYSGITGKEFKADIYIGLVYYQRLRHMVGDKWQVRTTGKVDKLTRQPVKGRKRGGGIR 1076
Query: 883 FGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF-------------IQ 929
FGEMERD+LLAHG ++LL DRL CSDY A +C CG + + + +Q
Sbjct: 1077 FGEMERDALLAHGTSFLLQDRLMNCSDYSTAWICKRCGLLSSLGYDLTDEAERTGSHHVQ 1136
Query: 930 PQKLPRREIGGLPPRKAPKKVICHAC-----------------------QTSKGMETVAM 966
+ P+ C C Q + M+ +A+
Sbjct: 1137 QAHQAEPTYSSSVKIRGPQGEYCRQCEPDFNLKLERPTQNGQSLESLPNQLANHMDIIAI 1196
Query: 967 PYVFRYLAAEFAAMNIK 983
PYVFRYL AE +M IK
Sbjct: 1197 PYVFRYLVAELMSMGIK 1213
>G4YQU6_PHYSP (tr|G4YQU6) DNA-directed RNA polymerase OS=Phytophthora sojae (strain
P6497) GN=PHYSODRAFT_538440 PE=3 SV=1
Length = 1179
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/1020 (45%), Positives = 630/1020 (61%), Gaps = 73/1020 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R +F+ R + YT+ AV ++CV+ DQS++TV L+YL++ +A + F VK +E+++P G
Sbjct: 198 MAVRRGAFANRGDLYTELAVTMKCVKRDQSAVTVTLHYLQDGNATVRFGVKKQEFMIPAG 257
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKG-KGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL +D EI YE+ +G + R +I+ E ++ SL+TR +
Sbjct: 258 LVLKALYPLTDREI-----------YERVLRGDHENTYLSARVELILREAKKFSLYTRDE 306
Query: 120 CLNYIGEHFQ---PILTELKNDSYDTVAKAVLKDYVFVHL----DDNFDKFNLLIFMLQK 172
L Y+G+HF+ P + E N S V +L DY+FVH+ K LL ML+K
Sbjct: 307 ALAYLGKHFRFAMPYVYE--NMSNVEVGSKLLDDYLFVHIPKGEKGRTQKVELLCLMLRK 364
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFD 228
L+ G DN DS+ N E+LLPGHL + LKEKL+D L + + E + K +
Sbjct: 365 LYGFAKGDVPEDNSDSVMNHELLLPGHLYLMLLKEKLQDSLVAMRMNILKETQNKEKSVV 424
Query: 229 FSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLS 288
++F+ +K +D+TP I ++ L TG L +++GLDL Q AGYT+ A++LNY R+ S
Sbjct: 425 MDQVFL-RKMWDRTPN--IGNAMTYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFS 481
Query: 289 HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQ 348
HFR+VHRG F ++TT VRKLLP+SWGFLCPVHTPDG PCGLLNH+ C + Y +
Sbjct: 482 HFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECELVCYPAHK 541
Query: 349 GSIKDYFKIKISILDILVDSGM--TQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
DY + ++ + L GM T L P L V+++G ++G P+ ++I
Sbjct: 542 AD--DYLQQEVKLARFLTSLGMIPTSGYADGALVVPYSYLPVMMNGKVLGGAPAEVCKRI 599
Query: 407 VAHIRELKVSSSAM------IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISIL 460
+ +R++K + S+ I +LEV + + GG +PGL+L +R RPV +
Sbjct: 600 ASVLRKVKSADSSEERDANGIVKNLEVCLILPTRGGPFPGLFLSADAARMSRPVMQM--- 656
Query: 461 SNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHN 520
+ K I+ IGP EQVFM+I C D R ++ TH EI PT MLS+VA+ TP+SD+N
Sbjct: 657 --DTKRIEYIGPMEQVFMDIACTK--DDIRPAT---THMEIKPTNMLSLVASLTPFSDYN 709
Query: 521 QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN 580
QSPRNMYQCQMAKQTM + +I HR D K+Y +Q+PQ PIV+ +Y +DEYP GTN
Sbjct: 710 QSPRNMYQCQMAKQTMGTPAHSIVHRTDNKMYRIQSPQIPIVQNERLREYQLDEYPLGTN 769
Query: 581 AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNI 640
A+VAV++YTG+DMEDAMILNKSS ERG H +Y+ TVD++ G + +S+ + SNI
Sbjct: 770 AVVAVISYTGFDMEDAMILNKSSYERGFAHASVYKQLTVDISSNGKQGSTTSKKYF-SNI 828
Query: 641 E--------KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV 692
+ +KLD DG PH+GQ++ +P S + +T K K SEP ++ V +
Sbjct: 829 KTDGSGEQCSTKLDRDGFPHIGQVVNYGDPIASWIDETTGQPSFQKHKESEPAIIEQVNM 888
Query: 693 --DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDL 750
+ K +I+ R RNP IGDKFSSRHGQKGV S LWP DMPF +G+ PD+
Sbjct: 889 IGSASQASEFTKASIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPF-SESGISPDV 947
Query: 751 IINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQ 810
IINPHAFPSRMTI ML+ES+AAK G+L G++++ATPF+ S +KD ++D G
Sbjct: 948 IINPHAFPSRMTIGMLIESMAAKTGALKGKYMDATPFKFS-EKDR--------VIDYFGS 998
Query: 811 MLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQ 870
L+E G+NY G E LYSG+ G + +I+IG VYYQRLRHMVSDK QVR+TG ++ +TRQ
Sbjct: 999 QLKEHGYNYMGSEPLYSGISGTVMQADIYIGVVYYQRLRHMVSDKSQVRATGPMNSLTRQ 1058
Query: 871 PXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML--ATSFI 928
P GEMERDSLLAHG A+L+ DRL CSD HIA VC+ CGS+L AT
Sbjct: 1059 PVKGRKKGGGIRLGEMERDSLLAHGCAFLVQDRLMNCSDKHIATVCTNCGSLLSNATQRS 1118
Query: 929 QPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ + EI KA + C CQT +G E VAMPYVFRYLA E AAMNIKM+L L
Sbjct: 1119 TVETAGQGEIA--IAMKAKTQWYCTVCQTGEGCEAVAMPYVFRYLANELAAMNIKMSLTL 1176
>B6K4L6_SCHJY (tr|B6K4L6) DNA-directed RNA polymerase OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=SJAG_03578 PE=3
SV=1
Length = 1170
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1043 (44%), Positives = 627/1043 (60%), Gaps = 122/1043 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF R YT + IRCVR DQSSLT L+YL N A F + EYL+P
Sbjct: 194 VALIRPSFGNRGTMYTQYGISIRCVRPDQSSLTNTLHYLSNGVAMFRFHWRKNEYLIPSM 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR----VDDRARMIIEEVRQLSLFT 116
++LKALI+TSD EI +G VG + + DR +++ + L T
Sbjct: 254 MILKALIETSDKEIF--------------EGIVGQETENTFLTDRVELMLRAYKSYGLST 299
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ Q L Y+G F+ +L ++ + V + +L+ V V+L DN DKF +L+FM++KL++L
Sbjct: 300 QTQSLQYLGSKFRVVLGLAEDLTDVEVGRTLLRRVVLVNLPDNRDKFRMLLFMIRKLYAL 359
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEI 232
V G DNPDS Q+QE+LL G L +KEK++DWL S + +++R + DFS+
Sbjct: 360 VAGECCADNPDSPQHQEILLGGFLFAQIIKEKIDDWLTSIRAQIQQDVRRGAAGIDFSDK 419
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
+ + F K + I T ++ L TG LV+NTGLDLQQ GYTV A++LN+ RFLSHFR
Sbjct: 420 KYLSRVFSKVNS-DIGTRLQYFLSTGNLVSNTGLDLQQATGYTVVAEKLNFYRFLSHFRM 478
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIK 352
VHRGA FA L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH+ C I + S
Sbjct: 479 VHRGAFFAELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHLASKCEIVT------SPI 532
Query: 353 DYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
D I +L + VD P + P+ ++V LDG IVG + + A +R+
Sbjct: 533 DVSNIPALLLSLGVD-------PPTAVVANPDWVSVQLDGKIVGWCTHKLAKHVAAVLRQ 585
Query: 413 LKV-------SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+KV + ++P LE+G VP S GG +PGL+LF+ +R VRPV+ ++
Sbjct: 586 MKVRGDLASDGKTPLVPLSLEIGLVPPSHGGQFPGLFLFSEQARMVRPVKYLA-----TG 640
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFP-------ATHEEIHPTGMLSVVANRTPWSD 518
+D +GPFEQV+M+I C FP TH E PT +LS+VAN TP+SD
Sbjct: 641 KLDNVGPFEQVYMDIAC-----------FPREIVPKITTHVEYSPTNVLSIVANMTPFSD 689
Query: 519 HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTG 578
NQSPRNMYQCQM KQTM I++R D K+Y LQT QTPIVR + Y +D YP G
Sbjct: 690 FNQSPRNMYQCQMGKQTMGTPGTAIRYRTDNKMYRLQTGQTPIVRPRLHDSYGLDHYPNG 749
Query: 579 TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF--- 635
NA+VAV++YTGYDMEDAMILNKS+ ERG +G +Y+++ +DL+E+ R +P F
Sbjct: 750 MNAVVAVISYTGYDMEDAMILNKSAHERGFGYGTVYKSQKIDLSEKRRRGEPVVHHFGFA 809
Query: 636 -----RKSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYV 690
R+ +EK LD DGLP++G + EP + Y+ ST G+EP +VD V
Sbjct: 810 PGSTPRREWLEK--LDMDGLPYIGTKVEDGEPIAAYYDESTGHNFVQTYHGTEPGFVDEV 867
Query: 691 AV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMR 747
V DV + + Q ++I+FR+ R+P+IGDKFSSRHGQKG+CSQ WP VDMPF +G++
Sbjct: 868 RVLGNDVGDS-ECQVLHIKFRNTRSPIIGDKFSSRHGQKGICSQKWPTVDMPFT-ESGIQ 925
Query: 748 PDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDD 807
PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF S E++ + D
Sbjct: 926 PDIIINPHAFPSRMTIGMFIESLAGKAGALHGMAQDSTPFVFS------ETQTAA---DY 976
Query: 808 LGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQV 867
G+ L + G+NYHG E +YSG+ GKEL +I+IG VYYQRLRHMVSDKFQVR+TG + +
Sbjct: 977 FGEQLVKAGYNYHGNEPMYSGITGKELHADIYIGVVYYQRLRHMVSDKFQVRTTGPIHNL 1036
Query: 868 TRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF 927
TRQP FGEMERD+++ HGA++L+ DRL CSDY + VC CGS+++
Sbjct: 1037 TRQPVKGRKRAGGIRFGEMERDAVIGHGASFLMQDRLMNCSDYAQSWVCRDCGSIIS--- 1093
Query: 928 IQPQKLPRREIGGLPPRKAPKKVICHAC-QTSKGMET---------------------VA 965
L + G +V C +C + + G+E +A
Sbjct: 1094 ----PLSTVNVSGA---ANSTEVRCRSCAKPATGLEDLSETWEDGLGQRFVGGANTTLIA 1146
Query: 966 MPYVFRYLAAEFAAMNIKMTLKL 988
+P VF YL AE AAMNIKM L++
Sbjct: 1147 LPSVFNYLTAELAAMNIKMMLEV 1169
>E3KL26_PUCGT (tr|E3KL26) DNA-directed RNA polymerase OS=Puccinia graminis f. sp.
tritici (strain CRL 75-36-700-3 / race SCCL)
GN=PGTG_11170 PE=3 SV=1
Length = 1224
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/1056 (44%), Positives = 628/1056 (59%), Gaps = 124/1056 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SF R YT A IRCVR DQ+S T L+YL N + F + E+++PV
Sbjct: 222 ISLIRPSFVNRGNFYTTYATQIRCVRPDQTSQTNTLHYLSNGTITFRFSWRKSEFMVPVV 281
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
++LKALI SD EI TNL ++ + + + DR +++ + SL T
Sbjct: 282 MLLKALIGASDQEIFTNLAQNAFEDTFRT-----------DRIELMLRNFQYYSLPTASA 330
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
CL+++G F+ +L + + + + +L+ V VHL D K+ LL+FM+QKL++LV G
Sbjct: 331 CLDFLGSKFKVVLGCPDDWGSEQIGRYLLQRIVLVHLKDPISKYRLLLFMIQKLYALVAG 390
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVV 235
DNPDS Q+QE+LLPGHL++ LKE+ E++L + E+++ + FS+ V
Sbjct: 391 ECCADNPDSPQHQEILLPGHLLSSILKERFEEYLGGIQAQITSEVRKSTTGVTFSDNKFV 450
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
K K + I + L TG LV+ TGLDLQQ +G+T+ A++LN+ R++SHFR VHR
Sbjct: 451 TKAIGKVYSD-IGRRVTFFLATGNLVSPTGLDLQQTSGFTIIAEKLNFYRYISHFRCVHR 509
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH C+I + S S+K+
Sbjct: 510 GAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHKCKILT---SAPSVKN-- 564
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
I +L+ GM+Q + P + ++V LDG I+G S ++ +R K
Sbjct: 565 -----IPSLLLSLGMSQPFDTTIHPS--KFVSVQLDGEIIGWASSSLCSRMATALRTWKT 617
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
IP +LE+G VP S GG YPGL+LF++P+R +RPV+ +S NK DL+G FEQ
Sbjct: 618 EGLENIPLELEIGLVPRSKGGQYPGLFLFSTPARMMRPVQLLS-----NKKTDLVGSFEQ 672
Query: 476 VFMEIRCP-DGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V+M+I C + D G +TH EI PT +LS++AN TP+SD NQSPRNMYQCQM+KQ
Sbjct: 673 VYMDIACSQEEIDPGF-----STHVEISPTHVLSLLANLTPFSDFNQSPRNMYQCQMSKQ 727
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM S I HR D KLY LQT QTPIVR + + Y +D +P GTNA+VAV++YTGYDME
Sbjct: 728 TMGTPSGVIHHRTDNKLYRLQTGQTPIVRPALHDVYQMDHFPNGTNAVVAVISYTGYDME 787
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS----------- 643
DAMILNKS+ ERG HG +Y++ VDL+ +GSR+ S + F I KS
Sbjct: 788 DAMILNKSAHERGFAHGMVYKSMIVDLSPEGSRTS-SEKHF---GIGKSFGGSESSAFNR 843
Query: 644 ---KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNK 697
KLDSDG+ VG +R +P C+ + +T T K KG E +V+ V + DV +
Sbjct: 844 MCDKLDSDGVALVGSRVRSGDPLCAYVDRTTGKTSFEKYKGDEEAFVEEVRMIGGDVPS- 902
Query: 698 KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAF 757
K+ K++ + R PR+PVIGDKFSSRHGQKGVCSQ WP +DMPF +G++PD+IINPHAF
Sbjct: 903 KECTKIHFKLRVPRSPVIGDKFSSRHGQKGVCSQKWPSIDMPF-SESGIQPDVIINPHAF 961
Query: 758 PSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGF 817
PSRMTI M +ES+A K G++HG +ATPFR N + S G+ LR G+
Sbjct: 962 PSRMTIGMFVESLAGKAGAMHGIAQDATPFRF-----NEQDTPSAY----FGEQLRAAGY 1012
Query: 818 NYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXX 877
NYHG E +YSG+ GKE +I+IG VYYQRLRHMV DK+QVR+TG VD++TRQP
Sbjct: 1013 NYHGNEPMYSGITGKEFEADIYIGLVYYQRLRHMVGDKWQVRTTGKVDKLTRQPVKGRKR 1072
Query: 878 XXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRRE 937
FGEMERD+LLAHG ++LL DRL CSDY A +C CG + + + L
Sbjct: 1073 GGGIRFGEMERDALLAHGTSFLLQDRLMNCSDYSTAWICKRCGLLSSLGYDTSDDL---- 1128
Query: 938 IGGLPPR-------------------KAPKKVICHAC----------------------- 955
GL P + P+ C C
Sbjct: 1129 --GLAPTSQHHQAHQAEPKFSSSVKMRGPRGEYCRQCEPDFPLKAAEHALPNTQNGQSLE 1186
Query: 956 ----QTSKGMETVAMPYVFRYLAAEFAAMNIKMTLK 987
Q + M+ +A+PYVFRYL AE AM IK+ L+
Sbjct: 1187 SLSGQLTNHMDVIAIPYVFRYLVAELMAMGIKIALQ 1222
>H3G5P5_PHYRM (tr|H3G5P5) DNA-directed RNA polymerase (Fragment) OS=Phytophthora
ramorum GN=gwEuk.163.5.1 PE=3 SV=1
Length = 1145
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/1025 (44%), Positives = 641/1025 (62%), Gaps = 83/1025 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R +F+ R + YT+ AV ++CV+ DQS++TV L+YL++ +A + F V+ +E+++PVG
Sbjct: 166 MAVRRGAFANRGDLYTELAVFMKCVKRDQSAVTVTLHYLQDGNATVRFGVRKQEFMIPVG 225
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKG-KGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL +D EI YE+ +G + R +I+ E ++ SL++R +
Sbjct: 226 LVLKALYPLTDREI-----------YERVLRGDHENTYLSARVELILREAKKFSLYSRDE 274
Query: 120 CLNYIGEHFQPILTELKNDSYDT-VAKAVLKDYVFVHL----DDNFDKFNLLIFMLQKLF 174
L Y+G+HF+ + + D + V +L +++FVH+ K LL ML+KL+
Sbjct: 275 ALAYLGKHFRFAMPYVYEDMSNVEVGSKLLDEFLFVHIPKGEKGRTQKVELLCLMLRKLY 334
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD------EMKRKSGTFD 228
+ G DN DS+ N E+LLPGHL + LKEKL++ L S ++ E K++S D
Sbjct: 335 AFAKGDVPEDNSDSVMNHELLLPGHLYLMILKEKLQESLASMRENILKATENKKRSVVMD 394
Query: 229 FSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLS 288
++F+ +K +D+TP I ++ L TG L +++GLDL Q AGYT+ A++LNY R+ S
Sbjct: 395 --QVFL-RKMWDRTPN--IGNAMSYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFS 449
Query: 289 HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY--FD 346
HFR+VHRG F ++TT VRKLLP+SWGFLCPVHTPDG PCGLLNH+ C++ SY F
Sbjct: 450 HFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVSYPAFK 509
Query: 347 SQGSIKDYFKIK--ISILDILVDSGMTQ---LVPKLLLPGPPEVLTVLLDGCIVGCIPSG 401
+ ++ K+ ++ L ++ SG +VP LP V+++G ++G P+
Sbjct: 510 ADDCLQQEVKLSRFLASLGMIPTSGYADGALIVPYSYLP-------VMMNGKVLGGAPAE 562
Query: 402 EVEKIVAHIRELKVSSSAMIPD------DLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVR 455
++I +R++K + S+ D +LEV + + GG +PGLYL +R RPV
Sbjct: 563 VCKRIANVLRKVKSAESSEERDANGIVVNLEVCLILPTRGGPFPGLYLSADAARMSRPVM 622
Query: 456 NISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTP 515
+ + K I+ IGP EQVFM+I C D R ++ TH EI PT MLS+VA+ TP
Sbjct: 623 QM-----DTKRIEYIGPMEQVFMDIACTK--DDIRPAT---THMEIKPTNMLSLVASLTP 672
Query: 516 WSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEY 575
+SD+NQSPRNMYQCQMAKQTM + +I HR+D K+Y +Q+PQ PIV+ +Y +DEY
Sbjct: 673 FSDYNQSPRNMYQCQMAKQTMGTPAHSIVHRSDNKMYRIQSPQIPIVQNERLREYQLDEY 732
Query: 576 PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF 635
P GTNA+VAV++YTG+DMEDAMILNKSS ERG H +Y+ TVD+ G + S++ +
Sbjct: 733 PLGTNAVVAVISYTGFDMEDAMILNKSSYERGFGHASVYKQLTVDIGPSGKQGGASTKKY 792
Query: 636 RKSNIE--------KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYV 687
SNI+ +KLD DG PH+GQM+ +P S + +T K K SEP +
Sbjct: 793 F-SNIKTDGSGEFCSTKLDRDGFPHIGQMVNYGDPIASWIDETTGLPSFQKHKESEPAII 851
Query: 688 DYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTG 745
+ V + + + QK +I+ R RNP IGDKFSSRHGQKGV S LWP DMPF TG
Sbjct: 852 EQVNMIGNSSQASEFQKASIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPF-SETG 910
Query: 746 MRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLL 805
+ PD+IINPHAFPSRMTI ML+ES+AAK G+L G++++ATPF+ S +KD ++
Sbjct: 911 ISPDIIINPHAFPSRMTIGMLIESMAAKTGALKGKYMDATPFKFS-EKDR--------VI 961
Query: 806 DDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD 865
D G L+E G+NY G E LYSG+ G + +I++G VYYQRLRHMVSDK QVR+TG ++
Sbjct: 962 DHFGSQLKEHGYNYMGSEPLYSGISGTVMQADIYMGVVYYQRLRHMVSDKSQVRATGPMN 1021
Query: 866 QVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML-- 923
+TRQP FGEMERDS+LAHG ++LL DRL CSD HIA VC+ CGS+L
Sbjct: 1022 SLTRQPVKGRKKGGGIRFGEMERDSILAHGCSFLLQDRLMNCSDKHIATVCTNCGSLLSN 1081
Query: 924 ATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIK 983
AT + + E+ K+ + C CQT + + VAMPYVFRYLA E AAMNIK
Sbjct: 1082 ATQRSTVETAGQGEVA--VALKSKTQWYCTVCQTGESCQAVAMPYVFRYLANELAAMNIK 1139
Query: 984 MTLKL 988
M+L L
Sbjct: 1140 MSLTL 1144
>M2RPJ9_CERSU (tr|M2RPJ9) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_148338 PE=3 SV=1
Length = 1228
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1057 (43%), Positives = 631/1057 (59%), Gaps = 118/1057 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR SF R YT AV IRCVR DQ+++T L+YL N SA L F + +EY++P+
Sbjct: 220 IALVRPSFVNRGPSYTPYAVQIRCVRPDQTAVTNTLHYLSNGSAMLRFSWRKQEYVIPIM 279
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + + YE + DR +++ + SL+T QC
Sbjct: 280 LILKALVSASDKEI---FEGVIMQDYED-------TFLTDRVELLLRSFKMYSLYTGDQC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ +L ++ + + +++ V VHL+ +KF +L+FML+KL+SLV +
Sbjct: 330 LEYLGDKFRVVLNMPEDWTNKALGAWIIQKLVLVHLESPREKFRMLLFMLRKLYSLVSHS 389
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
+DNPDS Q+QEVLLPG L + +KE+LE+ L + + ++ R + DF + VK
Sbjct: 390 CCVDNPDSPQHQEVLLPGSLYGMIIKERLEEALNNFRIAIQQDVNRGEPSVDFFDKRYVK 449
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K +T + + N L TG LV+ +GLDLQQ +G+T+ A++LN+ R++SHFR++HRG
Sbjct: 450 KILART-NFDVGARMSNFLATGNLVSPSGLDLQQASGFTIVAEKLNWQRYISHFRSIHRG 508
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI + S S+
Sbjct: 509 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVT---SPLSV----- 560
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEV-----LTVLLDGCIVGCIPSGEVEKIVAHIR 411
+ I +L GMTQ+ P V L V LDG ++G P + ++ +R
Sbjct: 561 --VHIPALLAAHGMTQVFA-------PSVDGRRNLCVQLDGRLIGWAPQAVLRQLATSLR 611
Query: 412 ELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
K +P DLE+G+VP+S GG YPGLYLF+S +R +RPV+ ++ N D IG
Sbjct: 612 IWKTEGKHSVPLDLEIGFVPVSKGGQYPGLYLFSSRARMMRPVKFVA-----NGRDDQIG 666
Query: 472 PFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
FEQV+M+I C P + G S H E PT LS++AN TP+SD NQSPRN+YQCQ
Sbjct: 667 SFEQVYMDIACTPAEIEDGVSS-----HVEHSPTNFLSILANLTPFSDFNQSPRNIYQCQ 721
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQ+M + I+HR D KLY LQT Q+P+VR + + Y +D +P GTNA+VAV++YTG
Sbjct: 722 MGKQSMGTPATAIRHRTDNKLYRLQTGQSPVVRPALHNTYGMDSFPNGTNAVVAVISYTG 781
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQ-GSR--SDPSSRMFRKSNIEKSK--- 644
YDMEDAMILNKS+ ERG +G +Y+ TVDL + G R S P+ I +
Sbjct: 782 YDMEDAMILNKSAHERGFGYGTVYKAYTVDLKDMPGVRTHSVPTLHFGLGYEIRTEEGPK 841
Query: 645 -------LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNK 697
LD DGLP VG + P +P + + +T T +K KG E YVD V + +
Sbjct: 842 QHWCCKFLDRDGLPFVGTRLNPGDPIAAYIDDTTGRTKFVKYKGDEIAYVDSVRLLGSDA 901
Query: 698 KD--LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPH 755
D LQK+N+ R R PVIGDKFSSRHGQKGVCSQ WP +DMPF +GM+PD+IINPH
Sbjct: 902 GDSELQKINLTLRITRAPVIGDKFSSRHGQKGVCSQKWPAIDMPFS-ESGMQPDVIINPH 960
Query: 756 AFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREK 815
AFPSRMTI ML+ES+A K G++HG +ATPF+ S +S +D G+ L
Sbjct: 961 AFPSRMTIGMLVESMAGKAGAMHGLAQDATPFQFS---------ESDTAVDYFGEQLLAA 1011
Query: 816 GFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXX 875
G+NY+G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD VTRQP
Sbjct: 1012 GYNYYGSEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTRQPVKGR 1071
Query: 876 XXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--IQPQKL 933
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + + ++
Sbjct: 1072 KRAGGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDVSLGEM 1131
Query: 934 PRREIGGLPPRKAPKKVICHAC-------------------------------------- 955
G L P P C C
Sbjct: 1132 TMGAHGQLKP-TGPGGEYCRVCRAAAEEDDERARQALANGQPAPPPIQGDVRVAIPAQNV 1190
Query: 956 --QTSKG--METVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ SKG ++ +A+PYVFRYL AE A+M I ++L++
Sbjct: 1191 LGRASKGGDLDIIAVPYVFRYLCAELASMGIAVSLEV 1227
>F0WZ84_9STRA (tr|F0WZ84) DNA-directed RNA polymerase OS=Albugo laibachii Nc14
GN=AlNc14C417G11490 PE=3 SV=1
Length = 1198
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1027 (43%), Positives = 631/1027 (61%), Gaps = 78/1027 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R +F+ R E YTD AV ++CVR DQSS+TV L+YL + SA + F V+ +E+++PV
Sbjct: 212 MAVRRGAFTNRGELYTDMAVFMKCVRRDQSSVTVTLHYLEDGSATVRFSVRKQEFMIPVV 271
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+VLKA+ +D EI + +G + R ++I++ + ++T+ +
Sbjct: 272 LVLKAMYSLTDREIYDRVL----------RGEHTNTFLALRMEVVIQQAKAFGVYTKEEA 321
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL----DDNFDKFNLLIFMLQKLFSL 176
L Y+G+HF+ +L + S+ V +++ ++VFVHL K LL ML+KL++
Sbjct: 322 LTYLGKHFRYVLQNSDDASHLQVGMSLIDEFVFVHLPKGEKGGSQKAELLCLMLRKLYAF 381
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEI 232
G DN DS+ NQE+LLPGHL LKEK+++ LQS + E +K+G D +
Sbjct: 382 AKGDICEDNSDSVMNQELLLPGHLYLNILKEKIQEGLQSLRIQILKECAKKTGVMDDA-- 439
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
+++ +D+TP I ++ L TG L +++GLDL Q AGYT+ A++LN+ R+LSHFR+
Sbjct: 440 -FMRRLWDRTPN--IGQAMMYFLNTGNLKSSSGLDLMQVAGYTIVAEKLNFYRYLSHFRS 496
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITS--YFDSQGS 350
VHRG F ++TT VRKLLP+SWGFLCPVHTPDG PCGLLNH+ C++ F++
Sbjct: 497 VHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLATECQVVCEPAFEATTI 556
Query: 351 IKDYFKIK--ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
+++ K+ +S L ++ +G + L++P L +L +G ++GC PS I
Sbjct: 557 LQNELKLARFLSSLGMIPSNGFSD--GALIMPS--SYLPILFNGKVIGCAPSDLCVTIQR 612
Query: 409 HIRELKVSSSAM-------IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILS 461
+R +K + S I +LE+ + ++GG +PGL+L +R RP++ +
Sbjct: 613 ALRSIKSTRSQADKRCEHGIIANLEICLILSTLGGPFPGLFLSADAARLTRPIKQL---- 668
Query: 462 NENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPAT-HEEIHPTGMLSVVANRTPWSDHN 520
+ + I+ IGP EQVFM I C + K PAT H EI PT MLS+VA+ TP+SD+N
Sbjct: 669 -DTEEIEWIGPMEQVFMNIACTE------KDIRPATTHIEIKPTNMLSLVASLTPFSDYN 721
Query: 521 QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN 580
QSPRNMYQCQMAKQTM ++ HR D K+Y +QTPQ+PIV+ +Y +DEYP GTN
Sbjct: 722 QSPRNMYQCQMAKQTMGTPCHSLSHRGDSKMYRIQTPQSPIVQNERLREYQLDEYPLGTN 781
Query: 581 AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDL----TEQGSRSDPSSRMFR 636
A+VAV++YTGYDMEDAMILNKSS ERG H +Y+ TVD+ +Q ++ SS+ +
Sbjct: 782 AVVAVISYTGYDMEDAMILNKSSYERGFAHASVYKHVTVDIGSDGKQQRTQKQDSSKAYF 841
Query: 637 KSNIEKS---------KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYV 687
+ I S +LD DG PHVG+ + +P + +T K K SEP V
Sbjct: 842 TNVISDSDSDLQFYSPELDYDGFPHVGKTVYQGDPLACWVDETTGKQSYQKHKESEPAVV 901
Query: 688 DYVAVDVKNKK--DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTG 745
+ V + K+ + D K N++ R RNPVIGDKFSSRHGQKGV S LWP DMPF +G
Sbjct: 902 EQVTLLGKSTQTCDFTKANLKLRFCRNPVIGDKFSSRHGQKGVLSILWPQTDMPFT-ESG 960
Query: 746 MRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLL 805
M PD+IINPHAFPSRMTI MLLES+AAK G+L GE+V+ATPF+ K ++
Sbjct: 961 MSPDIIINPHAFPSRMTIGMLLESMAAKAGALGGEYVDATPFKFDEKNR---------VV 1011
Query: 806 DDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD 865
D G+ L++ G+NY G E LYSG+ G + +I+IG VYYQRLRHMVSDK QVR+TG ++
Sbjct: 1012 DHFGEKLKQFGYNYMGTEPLYSGISGTIMQADIYIGVVYYQRLRHMVSDKSQVRATGPMN 1071
Query: 866 QVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML-- 923
+TRQP FGEMERDSLLAHG ++LL DRL CSD HIA VC+ C S+L
Sbjct: 1072 SLTRQPVKGRKKGGGIRFGEMERDSLLAHGCSFLLQDRLMNCSDKHIAIVCTNCESLLST 1131
Query: 924 ATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIK 983
AT + + EI + + + + C C T + + VAMPYVFRYL E AAMNIK
Sbjct: 1132 ATQRANVETTGQTEI-AVAMQISREHWFCRVCSTREHCQPVAMPYVFRYLVNELAAMNIK 1190
Query: 984 MTLKLNN 990
++L L +
Sbjct: 1191 LSLTLKS 1197
>J5SQ16_TRIAS (tr|J5SQ16) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC
7840 / NCYC 2677 / UAMH 7654) GN=A1Q1_04361 PE=3 SV=1
Length = 1197
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/1022 (45%), Positives = 624/1022 (61%), Gaps = 86/1022 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT IRCVR DQS+ T ++YL N A L F + EY++P+ ++LK
Sbjct: 223 RPSFAKRGVSYTPYGCQIRCVRPDQSACTNTIHYLSNGGATLRFAWRKVEYMIPLVLILK 282
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SDLEI L +G + DR +++ + +L T QCL+Y+
Sbjct: 283 ALVDASDLEIFEGLV----------QGEYDNTFLTDRVELLLRGQKSWNLQTGTQCLDYL 332
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
G+ F+ ++ + + V +LK V VHL +KF +L+FML+KL+S+V GTS D
Sbjct: 333 GDKFRVVMNCPDDWTNVQVGSYLLKKVVLVHLPQPREKFRMLLFMLRKLYSMVAGTSCPD 392
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK-----DEMKRKSGTFDFSEIF---VVK 236
NPDS Q+ EVLLPG L + +KE+ ++ L + K D + ++ +FD + F + K
Sbjct: 393 NPDSPQHHEVLLPGFLYAIIIKERFDESLNAVKAQINMDMRQGRAKSFDDPKYFPSVLTK 452
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
FD + + + L TG LV+ TGLDLQQ +G+TV A++LN+ R+LSHFR +HRG
Sbjct: 453 VNFD------VGSKLSYFLATGNLVSPTGLDLQQTSGFTVVAEKLNFYRYLSHFRCIHRG 506
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TT VRKLLPESWGFLCPVHTPDG PCGLLNH++ TC+I +K
Sbjct: 507 AFFAELKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHTCQIV--------VKPLDT 558
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
KI L L GMTQ+ + G V+ V LDG ++G + +++ +R+LK
Sbjct: 559 SKIPQL--LSAHGMTQVF-ATGIDGRTNVV-VQLDGRVIGWASPTKAKELADLLRKLKTE 614
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
A +P DLEVGYVP++ GG YPGLYLF S SR +RPV + EN +D +G FEQV
Sbjct: 615 GDARVPLDLEVGYVPVTKGGQYPGLYLFGSRSRMMRPVTYL-----ENDKMDHVGTFEQV 669
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M+I P+ + G +TH E+ PT MLSV+AN TP+SD NQSPRNMYQCQM KQT
Sbjct: 670 YMDIAIKPEEVEKGV-----STHVELDPTSMLSVLANLTPFSDFNQSPRNMYQCQMGKQT 724
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S +QHR D K Y +Q PQTPIVR S + Y D++P TNAI+AV++YTGYDMED
Sbjct: 725 MGTPSTALQHRTDNKFYRIQNPQTPIVRPSLHNDYGFDDFPNATNAILAVISYTGYDMED 784
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQG-SRSDPSSRMF------RKSNIEKSKLDSD 648
AMILNKSS ERG +G +Y+ + DL + SR+ + F + + + LD D
Sbjct: 785 AMILNKSSHERGFGYGTVYKADIFDLKDAARSRTAAPTLHFGLGRDVKPDSPWRQFLDQD 844
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIR 706
GLP +G ++ +P C+ + +T T K KG E Y+D V V + D LQK++I+
Sbjct: 845 GLPQLGTRVKSGDPLCAYIDDTTGRTKVHKYKGDETAYIDEVRVLGSDLGDSELQKIHIK 904
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R PR+PVIGDKFSSRHGQKGVCS + D+DMPF +GMRPD+IINPHAFPSRMTI M
Sbjct: 905 LRIPRSPVIGDKFSSRHGQKGVCSVKFKDIDMPF-SESGMRPDVIINPHAFPSRMTIGMF 963
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+E +AAK G++HG+ +ATPF+ S ++E ++ G+ LR+ G+NYHG E +Y
Sbjct: 964 VEMLAAKAGAVHGQCQDATPFKFS------DAEGP---VEFFGEQLRKAGYNYHGNEPMY 1014
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SGV G+E+ +IF+ P YQRLRH V+DK+Q RSTG VD +TRQP FGEM
Sbjct: 1015 SGVTGEEMRADIFLAPCAYQRLRHQVNDKYQARSTGPVDPLTRQPVKGRKRAGGIRFGEM 1074
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI---------QPQKLPR-- 935
ERD+L+AHG ++LL DRL CSDY A VC CGS+++ F +P++ R
Sbjct: 1075 ERDALIAHGTSFLLQDRLMNCSDYSTAWVCRGCGSLISLGFDDSVGPTNDGRPRQYCRIC 1134
Query: 936 ---REIGGLPPRKAPKKV------ICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
+ G L K V A S M+ +A+PYVFRYL AE A M I++ +
Sbjct: 1135 ERNEQPGALDGAVQDKSVGVVAKRESTATAASSKMDVIAVPYVFRYLCAEMACMGIRLNV 1194
Query: 987 KL 988
+
Sbjct: 1195 SV 1196
>D0MW98_PHYIT (tr|D0MW98) DNA-directed RNA polymerase OS=Phytophthora infestans
(strain T30-4) GN=PITG_02420 PE=3 SV=1
Length = 1179
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1018 (44%), Positives = 633/1018 (62%), Gaps = 69/1018 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R +F+ R + YT+ AV ++CV+ DQS++TV ++YL++ +A + F VK +E+++PVG
Sbjct: 198 MAVRRGAFANRGDLYTELAVFMKCVKRDQSAVTVTVHYLQDGNATVRFGVKKQEFMIPVG 257
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKG-KGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL +D EI YE+ +G + R +I+ E ++ SL+TR +
Sbjct: 258 LVLKALYPLTDREI-----------YERVLRGDHENTYLSARVELILREAKKFSLYTRDE 306
Query: 120 CLNYIGEHFQPILTELKNDSYDT-VAKAVLKDYVFVHL----DDNFDKFNLLIFMLQKLF 174
L Y+G+HF+ + + ++ + V +L D++FVH+ K LL ML+KL+
Sbjct: 307 ALAYLGKHFRFAMPYVYDNMNNVEVGSKLLDDFLFVHIPKGEKGRTQKVELLCLMLRKLY 366
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFS 230
+ G DN DS+ N E+LLPGHL + +KEKL++ L + + E + K
Sbjct: 367 AFAKGDVPEDNADSVMNHELLLPGHLYLMIMKEKLQESLVAMRANILKETQNKKRAVVMD 426
Query: 231 EIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
++F+ +K +++TP I ++ L TG L +++GLDL Q AGYT+ A++LNY R+ SHF
Sbjct: 427 QVFL-RKMWERTPN--IGNAMTYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFSHF 483
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
R+VHRG F ++TT VRKLLP+SWGFLCPVHTPDG PCGLLNH+ C + + +
Sbjct: 484 RSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECELVCHPAFKAD 543
Query: 351 IKDYFKIKISILDILVDSGM--TQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
DY + ++ + L GM T L P L V+++G ++G P+ ++I
Sbjct: 544 --DYLQQEVKLARFLASLGMIPTSGYADGALIVPYSYLPVMMNGKVLGGAPAEVCKRIAE 601
Query: 409 HIRELKVSSSAM------IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSN 462
+R++K + S+ I +LEV + + GG +PGLYL +R RPV+ +
Sbjct: 602 VLRKVKSAKSSEERDANGIVSNLEVCLILPTRGGPFPGLYLSADAARMSRPVKQM----- 656
Query: 463 ENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+ K I+ IGP EQVFM+I C D R ++ TH EI PT MLS+VA+ TP+SD+NQS
Sbjct: 657 DTKRIEYIGPMEQVFMDIACTK--DDIRPAT---THMEIKPTNMLSLVASLTPFSDYNQS 711
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQMAKQTM + +I HR+D K+Y +Q+PQ PIV+ +Y +DEYP GTNA+
Sbjct: 712 PRNMYQCQMAKQTMGTPAHSIVHRSDNKMYRIQSPQIPIVQNERLREYQLDEYPLGTNAV 771
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE- 641
VAV++YTG+DMEDAMILNKSS ERG H +Y+ TVD++ G + +S+ + SNI+
Sbjct: 772 VAVISYTGFDMEDAMILNKSSYERGFGHASVYKQLTVDISSNGKQGSATSKKYF-SNIKT 830
Query: 642 -------KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV-- 692
+KLD DG PH+GQ++ +P S + +T K K SEP ++ V +
Sbjct: 831 DGSGDYCSTKLDRDGFPHIGQVVNHGDPVASWIDETTGLPSVQKHKESEPAIIEQVNMIG 890
Query: 693 DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLII 752
+ + + K +I+ R RNP IGDKFSSRHGQKGV S LWP DMPF +G+ PD+II
Sbjct: 891 NSSSSSEFTKASIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPF-SESGISPDIII 949
Query: 753 NPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQML 812
NPHAFPSRMT+ ML+ES+AAK G+L G++++ATPF+ S +KD ++D G L
Sbjct: 950 NPHAFPSRMTVGMLIESMAAKTGALKGKYMDATPFQFS-EKDR--------VIDYFGSQL 1000
Query: 813 REKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPX 872
+E G+NY G E LYSG+ G + +I+IG VYYQRLRHMVSDK QVR+TG ++ +TRQP
Sbjct: 1001 KEHGYNYMGSEPLYSGISGTVMQADIYIGVVYYQRLRHMVSDKSQVRATGPMNSLTRQPV 1060
Query: 873 XXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML--ATSFIQP 930
GEMERDSLLAHG A+L+ DRL CSD HIA VC+ CGS+L AT
Sbjct: 1061 KGRKKGGGIRLGEMERDSLLAHGCAFLVQDRLLNCSDKHIATVCTNCGSLLSNATQRSTV 1120
Query: 931 QKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ + EI K+ + C CQT + + VAMPYVFRYLA E AAMNIKM+L L
Sbjct: 1121 ETAGQGEIA--VAMKSKTQWYCTVCQTGESCQPVAMPYVFRYLANELAAMNIKMSLTL 1176
>K9HZK2_AGABB (tr|K9HZK2) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_188567 PE=3 SV=1
Length = 1219
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1055 (42%), Positives = 630/1055 (59%), Gaps = 115/1055 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SF+ R YT AV IRCVR DQ+S T L+YL N SA L F + +EY++P+
Sbjct: 212 ISLIRPSFANRGLSYTQYAVQIRCVRPDQTSATNTLHYLSNGSAMLRFSWRKQEYVIPIM 271
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKA++ SD EI + YE + DR +++ + +L T QC
Sbjct: 272 LILKAMVGASDKEI---FEGVIMRDYE-------NTFLTDRVELLLRSFKVFTLNTGEQC 321
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L+Y+G+ F+ +L ++ + + K +++ + VHLD DKF +L+FML+KLF+LV +
Sbjct: 322 LDYLGDKFRVVLNLPEDWTNTAIGKWLVQKMILVHLDSPRDKFRMLLFMLRKLFALVSSS 381
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKK 237
DNPDS Q+QEVLLPG L + +KE++E+ L + + + R T DF + K+
Sbjct: 382 CCADNPDSPQHQEVLLPGTLYGMIIKERMEEILNNICNTVMLDVRNGATVDFHD----KR 437
Query: 238 CFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
F K ++ I + N L TG L++ TGLDLQQ +G+T+ A++LN+ R++SHFR +H
Sbjct: 438 YFTKVTSKVNFDIGARLANFLATGNLISPTGLDLQQASGFTIVAEKLNWQRYISHFRCIH 497
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI +
Sbjct: 498 RGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTS---------- 547
Query: 355 FKIKISILDILVDS-GMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
+ ++ L L+ S GMTQ+ + + ++V LDG I+G ++ ++R
Sbjct: 548 -PLAVAHLPSLLGSCGMTQVFTPSI--NGQKNISVQLDGRIIGWAQPSVASQLAKNLRVW 604
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
K +P DLE+G+VP S GG YPGL+LF + SR +RPV+ + N D IG F
Sbjct: 605 KTEGKNGVPLDLEIGFVPESDGGQYPGLFLFANRSRMMRPVKYLP-----NGKDDQIGSF 659
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQV+M + C P+ D +TH E +PT LS++AN TP+SD NQSPRN+YQCQM
Sbjct: 660 EQVYMNVACLPEEIDAN------STHVEHNPTNFLSILANLTPFSDFNQSPRNIYQCQMG 713
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQ+M S ++HR D KLY LQT Q+P+VR + Y +D YP GTNAIVAV++YTGYD
Sbjct: 714 KQSMGTPSTALKHRTDNKLYRLQTGQSPVVRPMLHNTYAMDSYPNGTNAIVAVISYTGYD 773
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIEKSK---- 644
MEDAMILNKS+ ERG +G +Y+++ VDL + S + PS ++
Sbjct: 774 MEDAMILNKSAHERGFAYGTVYKSQIVDLKDMRGANKSVTAPSLHFGLGPDVRLEGDRAH 833
Query: 645 -----LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD 699
LD DGLP++G ++ +P + + + T +K KG E YVD V + + D
Sbjct: 834 HCVDFLDLDGLPYIGTRLKAGDPIAAYIDETAGRTKFVKYKGDEMAYVDEVRLLASDSGD 893
Query: 700 --LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAF 757
LQK+++ R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAF
Sbjct: 894 TELQKMHVTLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFT-ESGMQPDVIINPHAF 952
Query: 758 PSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGF 817
PSRMTI ML+ES+A K G++HG +ATPF+ S +KD +D G+ L G+
Sbjct: 953 PSRMTIGMLVESMAGKAGAMHGLAQDATPFKFS-EKDTA--------IDYFGKQLSAAGY 1003
Query: 818 NYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXX 877
NY+G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD +TRQP
Sbjct: 1004 NYYGNEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPITRQPVKGRKR 1063
Query: 878 XXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF---------- 927
FGEMERD+L+AHGA++LL DRL CSDY A VC CGS+++ +
Sbjct: 1064 AGGIRFGEMERDALIAHGASFLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDISLGEVSL 1123
Query: 928 -----IQP-----------------------QKLPRREIGGLPPRK------APKKVICH 953
I+P Q L + PP+ + + V+
Sbjct: 1124 GTSGSIKPTGPSGEYCRVCRAAAEEEEEHERQALNTNQQSQRPPQNSVQVAISSQNVLGR 1183
Query: 954 ACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
A ++ VA+PYVFRYL AE A+M I ++L++
Sbjct: 1184 ASNKGGDLDVVAVPYVFRYLCAELASMGIAVSLEV 1218
>K5WWS6_AGABU (tr|K5WWS6) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_119994 PE=3 SV=1
Length = 1219
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1055 (42%), Positives = 630/1055 (59%), Gaps = 115/1055 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SF+ R YT AV IRCVR DQ+S T L+YL N SA L F + +EY++P+
Sbjct: 212 ISLIRPSFANRGLSYTQYAVQIRCVRPDQTSATNTLHYLSNGSAMLRFSWRKQEYVIPIM 271
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKA++ SD EI + YE + DR +++ + +L T QC
Sbjct: 272 LILKAMVGASDKEI---FEGVIMRDYEN-------TFLTDRVELLLRSFKVFTLNTGEQC 321
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L+Y+G+ F+ +L ++ + + K +++ + VHLD DKF +L+FML+KLF+LV +
Sbjct: 322 LDYLGDKFRVVLNLPEDWTNTAIGKWLVQKMILVHLDSPRDKFRMLLFMLRKLFALVSSS 381
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKK 237
DNPDS Q+QEVLLPG L + +KE++E+ L + + + R T DF + K+
Sbjct: 382 CCADNPDSPQHQEVLLPGTLYGMIIKERMEEILNNICNTVMLDVRNGATVDFHD----KR 437
Query: 238 CFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
F K ++ I + N L TG L++ TGLDLQQ +G+T+ A++LN+ R++SHFR +H
Sbjct: 438 YFTKVTSKVNFDIGARLANFLATGNLISPTGLDLQQASGFTIVAEKLNWQRYISHFRCIH 497
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI +
Sbjct: 498 RGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTS---------- 547
Query: 355 FKIKISILDILVDS-GMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
+ ++ L L+ S GMTQ+ + + ++V LDG I+G ++ ++R
Sbjct: 548 -PLAVAHLPSLLGSCGMTQVFTPSI--NGQKNISVQLDGRIIGWAQPSVASQLAKNLRVW 604
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
K +P DLE+G+VP S GG YPGL+LF + SR +RPV+ + N D IG F
Sbjct: 605 KTEGKNGVPLDLEIGFVPESDGGQYPGLFLFANRSRMMRPVKYLP-----NGKDDQIGSF 659
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQV+M + C P+ D +TH E +PT LS++AN TP+SD NQSPRN+YQCQM
Sbjct: 660 EQVYMNVACLPEEIDTN------STHVEHNPTNFLSILANLTPFSDFNQSPRNIYQCQMG 713
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQ+M S ++HR D KLY LQT Q+P+VR + Y +D YP GTNAIVAV++YTGYD
Sbjct: 714 KQSMGTPSTALKHRTDNKLYRLQTGQSPVVRPMLHNTYAMDSYPNGTNAIVAVISYTGYD 773
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIEKSK---- 644
MEDAMILNKS+ ERG +G +Y+++ VDL + S + PS ++
Sbjct: 774 MEDAMILNKSAHERGFAYGTVYKSQIVDLKDMRGANKSVTAPSLHFGLGPDVRLEGDRAH 833
Query: 645 -----LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD 699
LD DGLP++G ++ +P + + + T +K KG E YVD V + + D
Sbjct: 834 HCVDFLDLDGLPYIGTRLKAGDPIAAYIDETAGRTKFVKYKGDEMAYVDEVRLLASDSGD 893
Query: 700 --LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAF 757
LQK+++ R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAF
Sbjct: 894 TELQKMHVTLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFT-ESGMQPDVIINPHAF 952
Query: 758 PSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGF 817
PSRMTI ML+ES+A K G++HG +ATPF+ S +KD +D G+ L G+
Sbjct: 953 PSRMTIGMLVESMAGKAGAMHGLAQDATPFKFS-EKDTA--------IDYFGKQLSAAGY 1003
Query: 818 NYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXX 877
NY+G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD +TRQP
Sbjct: 1004 NYYGNEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPITRQPVKGRKR 1063
Query: 878 XXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF---------- 927
FGEMERD+L+AHGA++LL DRL CSDY A VC CGS+++ +
Sbjct: 1064 AGGIRFGEMERDALIAHGASFLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDISLGEVSL 1123
Query: 928 -----IQP-----------------------QKLPRREIGGLPPRK------APKKVICH 953
I+P Q L + PP+ + + V+
Sbjct: 1124 GTSGSIKPTGPSGEYCRVCRAAAEEEEEHERQALSTSQQSQRPPQNGVQVAISSQNVLGR 1183
Query: 954 ACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
A ++ VA+PYVFRYL AE A+M I ++L++
Sbjct: 1184 ASNKGGDLDVVAVPYVFRYLCAELASMGIAVSLEV 1218
>B0CXK3_LACBS (tr|B0CXK3) DNA-directed RNA polymerase OS=Laccaria bicolor (strain
S238N-H82 / ATCC MYA-4686) GN=LACBIDRAFT_246569 PE=3 SV=1
Length = 1179
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1028 (43%), Positives = 621/1028 (60%), Gaps = 97/1028 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SFS R YT AV +RCVR DQ+S+T L+YL N SA L F + +EY++P+
Sbjct: 208 ISLLRPSFSNRGPSYTQYAVQMRCVRPDQTSVTNTLHYLSNGSAMLRFSWRKQEYVIPIM 267
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+VLKAL+ SD EI + + YE + DR +++ + ++ T QC
Sbjct: 268 LVLKALVGASDKEI---FEGVIMQDYEN-------TFLTDRVELLLRSFKMFTMQTGEQC 317
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ +L ++ + +L+ + VHL+ +KF +L+FML+KL+SLV G+
Sbjct: 318 LEYLGDKFRVVLNLPEDWTNAAQGAWLLRKMILVHLETPREKFRMLLFMLRKLYSLVSGS 377
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS---GKDEMKRKSGTFDFSEIFVVKK 237
DNPDS Q+QEVLLPG L + +KE+LE+ L G R DF++ K+
Sbjct: 378 CCADNPDSPQHQEVLLPGSLYGMIIKERLEEILNGIRMGISMDVRNGVAVDFND----KR 433
Query: 238 CFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
F K ++ I + + N L TG LV+ TGLDLQQ +G+T+ A++LN+ R++SHFR +H
Sbjct: 434 YFQKVVSKVNFDIGSKLSNFLATGNLVSPTGLDLQQASGFTIVAEKLNWQRYISHFRCIH 493
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ +CRIT+ + I
Sbjct: 494 RGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRSCRITTTPLAVAHIPA- 552
Query: 355 FKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
+L GMTQ+ + + L+V LDG ++G ++ ++R K
Sbjct: 553 ---------LLAAHGMTQVFTPTI--DGRKNLSVQLDGRVIGWARPSVAAQLATNLRIWK 601
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
+P DLE+G VP+S GG YPGL+LF++ +R +RPV+ + N D +GPFE
Sbjct: 602 TEGKHEVPLDLEIGLVPVSNGGQYPGLFLFSTTARMMRPVKYLG-----NGRDDQVGPFE 656
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M I C P+ +TH E PT LS++AN TP+SD NQSPRN+YQCQM K
Sbjct: 657 QVYMNIACIPE-----EIEEAVSTHVEHEPTNFLSILANLTPFSDFNQSPRNIYQCQMGK 711
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
Q+M + +QHR D KLY LQT Q+P+VR + + Y +D +P GTNAIVAV++YTGYDM
Sbjct: 712 QSMGTPATALQHRTDNKLYRLQTGQSPVVRPALHNTYAMDSFPNGTNAIVAVISYTGYDM 771
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSD----PSSRMFRKSNIEKSK----- 644
EDAMILNKS+ ERG +G +Y+++ +DL E S P+ ++I +
Sbjct: 772 EDAMILNKSAHERGFGYGTVYKSQIIDLKEMRGASKLNSVPTLHFGLGNDIRTTGDKLHA 831
Query: 645 ----LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD- 699
LD DGLP +G + +P + + +T T ++ KG E Y+D V + + D
Sbjct: 832 CLEFLDLDGLPFIGARLSSGDPIAAYVDDTTGRTKFVRYKGDELGYIDEVRLLGFDAGDT 891
Query: 700 -LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
LQK++I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFP
Sbjct: 892 ELQKIHITLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHAFP 950
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI ML+ES+A K G++HG +ATPF+ S ++D ++ G+ L G+N
Sbjct: 951 SRMTIGMLVESMAGKAGAMHGLAQDATPFKFS-EEDTA--------INYFGEQLLAAGYN 1001
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
Y+G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD VTRQP
Sbjct: 1002 YYGNEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTRQPVKGRKRA 1061
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + K
Sbjct: 1062 GGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDTLK------ 1115
Query: 939 GGLPPRKAPKKVICHACQ----------------TSKG--METVAMPYVFRYLAAEFAAM 980
P C C+ SKG ++ VA+PYVFRYL AE A+M
Sbjct: 1116 -----PSGPGGEYCRVCRAASEEEDERERQALATASKGGDLDVVAVPYVFRYLCAELASM 1170
Query: 981 NIKMTLKL 988
I ++L++
Sbjct: 1171 GIAVSLEV 1178
>K3WI27_PYTUL (tr|K3WI27) DNA-directed RNA polymerase OS=Pythium ultimum
GN=PYU1_G004608 PE=3 SV=1
Length = 1182
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1017 (43%), Positives = 621/1017 (61%), Gaps = 69/1017 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R +F+ R + YT+ AV ++CVR DQS++TV +YL + +A + F VK +E+++PVG
Sbjct: 203 MAVRRGAFANRGDLYTELAVFMKCVRRDQSAVTVTCHYLEDGNATVRFGVKKQEFMIPVG 262
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKG-KGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL +D EI YE+ +G + R +I+ E ++ SL++R +
Sbjct: 263 LVLKALYPLTDREI-----------YERVLRGDHDNTYLSARVELILREAKKFSLYSREE 311
Query: 120 CLNYIGEHFQPILT-ELKNDSYDTVAKAVLKDYVFVHL----DDNFDKFNLLIFMLQKLF 174
L Y+G+HF+ ++ ++ S V +L +Y+FVH+ K LL ML+KL+
Sbjct: 312 ALAYLGKHFRHVMPYAYESMSNVEVGSKMLDEYLFVHIPKGEKGRAQKVELLCLMLRKLY 371
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGT----FDFS 230
+ G DN DS+ N E+LLPGHL + LKEKL++ L + + ++++ G+
Sbjct: 372 AFAKGEIREDNSDSVMNHELLLPGHLYLMILKEKLQEQLAAMRANIQKECGSSKKNIVMD 431
Query: 231 EIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
++F+ +K +++T I ++ L TG L +++GLDL Q AGYT+ A++LNY R+ SHF
Sbjct: 432 QVFL-RKMWERTAN--IGHAMTYFLNTGNLRSSSGLDLMQVAGYTIVAEKLNYYRYFSHF 488
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
R+VHRG F ++TT VRKLLP+SWGF+CPVHTPDG PCGLLNH+ C + SY +
Sbjct: 489 RSVHRGQFFTEMKTTAVRKLLPDSWGFMCPVHTPDGSPCGLLNHLAVECELVSYPAHKAD 548
Query: 351 IKDYFKIKISILDILVDSGM--TQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
DY ++ + L GM T L P L ++++G ++G P+ ++I
Sbjct: 549 --DYLAQEMKLARFLASLGMIPTSGYADGALVVPYSYLPIMMNGKVLGGAPAEVCKRIQQ 606
Query: 409 HIRELKVSSSAM------IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSN 462
+R++K + I +LEV + ++GG YPGLYL +R RPV +
Sbjct: 607 TLRQVKSAEDPAERTEHGIVANLEVCLILPTLGGTYPGLYLSADAARMSRPVVQM----- 661
Query: 463 ENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+ I+ IGP EQVFM+I D R ++ TH EI PT MLS+VA+ TP+SD+NQS
Sbjct: 662 DTHRIEYIGPMEQVFMDIAVTK--DDIRPAT---THMEIKPTNMLSLVASLTPFSDYNQS 716
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQMAKQTM + +I +R D K+Y +Q+PQ PIV+ +Y +DEYP GTNA+
Sbjct: 717 PRNMYQCQMAKQTMGTPAHSIVNRTDNKMYRIQSPQIPIVQNERLREYQLDEYPLGTNAV 776
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE- 641
VAV++YTGYDMEDAMILNKSS ERG H +Y+ VD+ G + S + F SN++
Sbjct: 777 VAVISYTGYDMEDAMILNKSSYERGFAHASVYKQINVDIGSDGKQGGASKKYF--SNVKP 834
Query: 642 ------KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--D 693
S LD DG PH+GQ++ +P + +T K K SEP ++ + + +
Sbjct: 835 SSGEQCSSSLDRDGFPHIGQVVNYGDPIACWIDETTGEPQFQKHKESEPAIIEQINMIGN 894
Query: 694 VKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIIN 753
+ K I+ R RNP IGDKFSSRHGQKGV S LWP DMPF +GM PD+IIN
Sbjct: 895 SSQASEHTKAGIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPF-AESGMSPDIIIN 953
Query: 754 PHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLR 813
PHAFPSRMTI ML+ES+AAK G+L G++++ATPF+ S +KD ++D G L+
Sbjct: 954 PHAFPSRMTIGMLIESMAAKTGALKGKYMDATPFQFS-EKDR--------VIDYFGSQLK 1004
Query: 814 EKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXX 873
E G+NY G E LYSG+ G + +I++G VYYQRLRHMVSDK QVR+TG ++ +TRQP
Sbjct: 1005 EHGYNYMGSEPLYSGISGTVMQADIYMGVVYYQRLRHMVSDKSQVRATGPMNSLTRQPVK 1064
Query: 874 XXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML--ATSFIQPQ 931
FGEMERDSLLAHG A+LL DRL CSD HIA VC+ CGS+L AT +
Sbjct: 1065 GRKKGGGIRFGEMERDSLLAHGCAFLLQDRLLNCSDKHIATVCTNCGSLLSNATQRASVE 1124
Query: 932 KLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ EI KA + C CQ+ + VAMPYVFRYLA E AAMNIKM+L L
Sbjct: 1125 TAGQGEIA--VAMKAKTQWYCTVCQSGANCQAVAMPYVFRYLANELAAMNIKMSLSL 1179
>M4B3C6_HYAAE (tr|M4B3C6) DNA-directed RNA polymerase OS=Hyaloperonospora
arabidopsidis (strain Emoy2) PE=3 SV=1
Length = 1148
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1021 (43%), Positives = 631/1021 (61%), Gaps = 71/1021 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R +F+ R + YT+ AV ++CV+ DQ+++TV ++YL + +A + F V+ +E+++PVG
Sbjct: 167 MAVRRGAFANRGDLYTELAVFMKCVKRDQTAVTVTVHYLEDGNATVRFGVRKQEFMIPVG 226
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKG-KGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL +D EI YE+ +G + R +I+ E ++ SL++R +
Sbjct: 227 LVLKALYPLTDREI-----------YERVLRGDHENTYLSARVELILREAKKFSLYSRDE 275
Query: 120 CLNYIGEHFQPILTEL-KNDSYDTVAKAVLKDYVFVHL----DDNFDKFNLLIFMLQKLF 174
L Y+G+HF+ + + N S V +L +++FVH+ K LL ML+KL+
Sbjct: 276 ALAYLGKHFRFAMPYVYDNMSNVEVGSKLLDEFLFVHIPKGEKGRTQKVELLCLMLRKLY 335
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFS 230
+ G DN DS+ N E+LLPGHL + +KEKL++ L + + E + K +
Sbjct: 336 AFAKGDIPEDNSDSVMNHELLLPGHLYLMIMKEKLQESLAAIRANILKETQNKKKSVVMD 395
Query: 231 EIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
++F+ +K +D+ P I ++ L TG L + +GLDL Q AGYT+ A++LNY R+ SHF
Sbjct: 396 QVFL-RKMWDRCPN--IGNAMTYFLNTGNLRSTSGLDLLQIAGYTIVAEKLNYYRYFSHF 452
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
R+VHRG F ++TT VRKLLP+SWGFLCPVHTPDG PCGLLNH+ C++ + Q
Sbjct: 453 RSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVCHPAFQAD 512
Query: 351 IKDYFKIKISILDILVDSGM--TQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
++ + ++ + +L GM T L P L V+++G ++G P+ ++I
Sbjct: 513 --NFLQQEVKLCRLLASLGMIPTSGYADGALIVPYSYLPVMMNGKVLGGAPADVCKRIAG 570
Query: 409 HIRELKVSSSA-------MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILS 461
+R++K + S+ ++P+ LEV + + GG +PGLYL +R RPV +
Sbjct: 571 VLRKIKSAESSDERDANGIVPN-LEVCLILPTRGGPFPGLYLSADAARMSRPVVQM---- 625
Query: 462 NENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQ 521
+ I+ IGP EQVFM+I C + D R ++ TH EI PT MLS+VA+ TP+SD+NQ
Sbjct: 626 -DTNRIEYIGPMEQVFMDIACTN--DDVRPAT---THMEIKPTNMLSLVASLTPFSDYNQ 679
Query: 522 SPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA 581
SPRNMYQCQMAKQTM + +I HR+D K+Y +Q+PQ PIV+ +Y +DEYP GTNA
Sbjct: 680 SPRNMYQCQMAKQTMGTPAHSIVHRSDNKMYRIQSPQIPIVQNERLREYQLDEYPLGTNA 739
Query: 582 IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE 641
+VAV++YTG+DMEDAMILNKSS ERG H +Y+ VD++ G + +S+ + SNI+
Sbjct: 740 VVAVISYTGFDMEDAMILNKSSYERGFGHASVYKQLVVDISSGGKQGSTTSKKYF-SNIK 798
Query: 642 --------KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV- 692
+KLD DG PHVGQ++ +P S + +T K K +EP +D + +
Sbjct: 799 TDGSGEFCSTKLDRDGFPHVGQVVNNGDPIASWIDETTGLPSFQKHKETEPAIIDQINMI 858
Query: 693 -DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLI 751
+ K +I+ R RNP IGDKFSSRHGQKGV S LWP DMPF +G+ PD+I
Sbjct: 859 GSSSQASEFTKASIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPF-SESGLSPDII 917
Query: 752 INPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQM 811
INPHAFPSRMTI ML+ES+AAK G+L G++++ATPF+ S +KD ++D G
Sbjct: 918 INPHAFPSRMTIGMLIESMAAKTGALKGKYMDATPFQFS-EKDR--------VIDYFGSQ 968
Query: 812 LREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQP 871
L+E G+NY G E LYSG+ G + +I+IG VYYQRLRHMVSDK QVR+TG ++ +TRQP
Sbjct: 969 LKEHGYNYMGSEPLYSGISGTIMQADIYIGVVYYQRLRHMVSDKSQVRATGPMNSLTRQP 1028
Query: 872 XXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML--ATSFIQ 929
FGEMERDS+LAHG A+LL DRL CSD HIA VC+ CGS+L AT
Sbjct: 1029 VKGRKKGGGIRFGEMERDSMLAHGCAFLLQDRLMNCSDKHIATVCTNCGSLLSNATQRAT 1088
Query: 930 PQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+ + EI K+ + C CQT + + VAMPYVFRYLA E AAMNIKM L L
Sbjct: 1089 VETAGQGEIA--IAMKSKTQWYCIVCQTGESCQPVAMPYVFRYLANELAAMNIKMNLTLR 1146
Query: 990 N 990
+
Sbjct: 1147 S 1147
>Q5KEV8_CRYNJ (tr|Q5KEV8) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CNF04080 PE=3 SV=1
Length = 1193
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1019 (43%), Positives = 611/1019 (59%), Gaps = 87/1019 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT IRCVR D+++ T ++YL N A L F + EY++P+ ++LK
Sbjct: 226 RPSFAKRGASYTPYGCQIRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILK 285
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SD EI L +G + DR +++ + L T QCL+Y+
Sbjct: 286 ALVDASDKEIFEGLI----------QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYL 335
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
GE F+ +L + S V +L+ V VHL DKF +L+FML+KL+S V G + D
Sbjct: 336 GEKFRVVLNVPDDWSNVQVGGYLLRKVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCPD 395
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKKCFDK 241
NPDS Q+ EVLLPG L + +KE+ +D L + K +++ R F + K
Sbjct: 396 NPDSPQHHEVLLPGFLYGMIIKERFDDCLNAVKSQIQLDLRDGKARSFMDPKYFTSVLSK 455
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
T I + + L TG LV+ TGLDLQQ +G+T+ A++LN+ R+LSHFR +HRGA FA
Sbjct: 456 T-NWDIGSKLSYFLATGNLVSPTGLDLQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAE 514
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYFDSQGSIKDYFKIKIS 360
L+TTTVRKL+PESWGFLCPVHTPDG PCGLLNH++ TC+I TS D
Sbjct: 515 LKTTTVRKLMPESWGFLCPVHTPDGSPCGLLNHLSHTCQIVTSSLDVS-----------H 563
Query: 361 ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAM 420
I +L GMTQ+ + ++ + LDG ++G + +++ +R+LK + +
Sbjct: 564 IPALLSAQGMTQVFASSI--DGRRMVCIQLDGKVIGYASPMKAKQLANRLRKLKTEADSK 621
Query: 421 IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEI 480
+P DLE+GYVP++ GG YPGLYLF S SR +RPV + EN +D +G FEQV+M++
Sbjct: 622 VPLDLEIGYVPVTKGGQYPGLYLFASRSRMMRPVTYL-----ENGKLDHLGSFEQVYMDV 676
Query: 481 RCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSS 540
++H E+ PT MLSV+AN TP+SD NQSPRNMYQCQM KQ+M S
Sbjct: 677 AITKE----EIEKGVSSHVELDPTSMLSVIANMTPFSDFNQSPRNMYQCQMGKQSMGTPS 732
Query: 541 QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILN 600
I R D K+Y LQ+ QTP+VR + +Y D +P GTNAIVAV++YTGYDMEDAMILN
Sbjct: 733 TAISKRTDNKMYRLQSGQTPVVRPDLHNQYGFDNFPNGTNAIVAVISYTGYDMEDAMILN 792
Query: 601 KSSVERGMFHGQIYQTETVDL--TEQGSRSDPSSRMF------RKSNIEKSKLDSDGLPH 652
KS+ ERG +G +Y+ + DL SRS + F ++ + ++ + DGLP
Sbjct: 793 KSAHERGFGYGTVYKADIFDLKGVPGASRSAKPTLHFGLGRDVKEDHDARNIISQDGLPI 852
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHP 710
+G ++ +P C+ + +T T K KG E ++D V V + D LQK++I+ R P
Sbjct: 853 IGTRVKAGDPLCAYIDDTTGRTKFHKYKGDETAFIDEVRVLGSDAGDAELQKIHIKLRIP 912
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
R+PVIGDKFSSRHGQKGVCSQ +P +DMPF +GM+PD+IINPHAFPSRMTI M +ES+
Sbjct: 913 RSPVIGDKFSSRHGQKGVCSQKFPAIDMPFS-ESGMQPDVIINPHAFPSRMTIGMFVESM 971
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K G+LHG +ATPF+ S K +D G+ LR G+NY+G E +YSG+
Sbjct: 972 AGKAGALHGLAQDATPFKFSDKDRP---------VDYFGEQLRAAGYNYYGNEPMYSGIT 1022
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G+E +I++G VYYQRLRHMV+DKFQVR+TG VD +TRQP FGEMERD+
Sbjct: 1023 GEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGEMERDA 1082
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKV 950
L+AHG ++LL DRL CSDY A VC CGS+++ F E+GG + +
Sbjct: 1083 LIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGF--------EEVGGAQGMQEYCR- 1133
Query: 951 IC------HACQTSKG---------------METVAMPYVFRYLAAEFAAMNIKMTLKL 988
IC HA + SK M+ V +PYVFRYL AE A M IK+ + +
Sbjct: 1134 ICDGHKHEHAEEMSKENGVGVVMRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV 1192
>F5HHB3_CRYNB (tr|F5HHB3) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBF0780
PE=3 SV=1
Length = 1193
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1019 (43%), Positives = 611/1019 (59%), Gaps = 87/1019 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT IRCVR D+++ T ++YL N A L F + EY++P+ ++LK
Sbjct: 226 RPSFAKRGASYTPYGCQIRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILK 285
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SD EI L +G + DR +++ + L T QCL+Y+
Sbjct: 286 ALVDASDKEIFEGLI----------QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYL 335
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
GE F+ +L + S V +L+ V VHL DKF +L+FML+KL+S V G + D
Sbjct: 336 GEKFRVVLNVPDDWSNVQVGGYLLRKVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCPD 395
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKKCFDK 241
NPDS Q+ EVLLPG L + +KE+ +D L + K +++ R F + K
Sbjct: 396 NPDSPQHHEVLLPGFLYGMIIKERFDDCLNAVKSQIQLDLRDGKARSFMDPKYFTSVLSK 455
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
T I + + L TG LV+ TGLDLQQ +G+T+ A++LN+ R+LSHFR +HRGA FA
Sbjct: 456 T-NWDIGSKLSYFLATGNLVSPTGLDLQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAE 514
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYFDSQGSIKDYFKIKIS 360
L+TTTVRKL+PESWGFLCPVHTPDG PCGLLNH++ TC+I TS D
Sbjct: 515 LKTTTVRKLMPESWGFLCPVHTPDGSPCGLLNHLSHTCQIVTSSLDVS-----------H 563
Query: 361 ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAM 420
I +L GMTQ+ + ++ + LDG ++G + +++ +R+LK + +
Sbjct: 564 IPALLSAQGMTQVFASSI--DGRRMVCIQLDGKVIGYASPMKAKQLANRLRKLKTEADSK 621
Query: 421 IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEI 480
+P DLE+GYVP++ GG YPGLYLF S SR +RPV + EN +D +G FEQV+M++
Sbjct: 622 VPLDLEIGYVPVTKGGQYPGLYLFASRSRMMRPVTYL-----ENGKLDHLGSFEQVYMDV 676
Query: 481 RCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSS 540
++H E+ PT MLSV+AN TP+SD NQSPRNMYQCQM KQ+M S
Sbjct: 677 AITKE----EIEKGVSSHVELDPTSMLSVIANMTPFSDFNQSPRNMYQCQMGKQSMGTPS 732
Query: 541 QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILN 600
I R D K+Y LQ+ QTP+VR + +Y D +P GTNAIVAV++YTGYDMEDAMILN
Sbjct: 733 TAISKRTDNKMYRLQSGQTPVVRPDLHNQYGFDNFPNGTNAIVAVISYTGYDMEDAMILN 792
Query: 601 KSSVERGMFHGQIYQTETVDL--TEQGSRSDPSSRMF------RKSNIEKSKLDSDGLPH 652
KS+ ERG +G +Y+ + DL SRS + F ++ + ++ + DGLP
Sbjct: 793 KSAHERGFGYGTVYKADIFDLKGVPGASRSAKPTLHFGLGRDVKEDHDARNIISQDGLPI 852
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHP 710
+G ++ +P C+ + +T T K KG E ++D V V + D LQK++I+ R P
Sbjct: 853 IGTRVKAGDPLCAYIDDTTGRTKFHKYKGDETAFIDEVRVLGSDAGDAELQKIHIKLRIP 912
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
R+PVIGDKFSSRHGQKGVCSQ +P +DMPF +GM+PD+IINPHAFPSRMTI M +ES+
Sbjct: 913 RSPVIGDKFSSRHGQKGVCSQKFPAIDMPFS-ESGMQPDVIINPHAFPSRMTIGMFVESM 971
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K G+LHG +ATPF+ S K +D G+ LR G+NY+G E +YSG+
Sbjct: 972 AGKAGALHGLAQDATPFKFSDKDRP---------VDYFGEQLRAAGYNYYGNEPMYSGIT 1022
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G+E +I++G VYYQRLRHMV+DKFQVR+TG VD +TRQP FGEMERD+
Sbjct: 1023 GEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGEMERDA 1082
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKV 950
L+AHG ++LL DRL CSDY A VC CGS+++ F E+GG + +
Sbjct: 1083 LIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGF--------EEVGGAQGMQEYCR- 1133
Query: 951 IC------HACQTSKG---------------METVAMPYVFRYLAAEFAAMNIKMTLKL 988
IC HA + SK M+ V +PYVFRYL AE A M IK+ + +
Sbjct: 1134 ICDGHKHEHAEEMSKENGVGVVMRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV 1192
>E6ZTI0_SPORE (tr|E6ZTI0) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr12433 PE=3 SV=1
Length = 1290
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1062 (42%), Positives = 616/1062 (58%), Gaps = 117/1062 (11%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQ-SSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
R SF +R Y++KA+VIRC+ D S+T ++YL N L F + +EY++PV +VL
Sbjct: 268 RPSFEKRGPSYSNKAIVIRCLHKDDLISVTNAVHYLHNGGLTLRFSWRKQEYMVPVVMVL 327
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KAL+D +D EI ++ +G + DR +++ +Q SL++ QCL Y
Sbjct: 328 KALVDATDKEIFASIV----------QGDFENTFLTDRVELLLRNFKQYSLWSGHQCLEY 377
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+G F+ +L ++ + V ++ VHLD +KF +LIFM+QKL+SLV G S
Sbjct: 378 LGSKFRVVLGCPEDWNDAQVGSELIHRIFLVHLDSPREKFKMLIFMIQKLYSLVAGESCA 437
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR----KSGTFDFSEIFVVKKCF 239
DN DS Q+ E+L+PG L+ +KE++++ + + + ++ R K DF + VKK
Sbjct: 438 DNADSPQHHEILMPGFLVGQIIKERIDEAVGNIRAQIARDVRMKVKGLDFYDTRYVKKTV 497
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
K I I + L TG L + +GLDLQQ +G+T+ A++LN+ R+L+HFR+VHRGA F
Sbjct: 498 SKVNID-IGVKIASFLATGNLSSPSGLDLQQTSGFTIMAEKLNFARYLAHFRSVHRGAFF 556
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH + TCR+T+ Q +
Sbjct: 557 AELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHFSHTCRMTT---RQPDVSH------ 607
Query: 360 SILDILVDSGMTQLVPKLLLP-----------GPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
I +L GMT+ + V+ V LDG I+G + +
Sbjct: 608 -IHALLSGLGMTEAAFAVGAVGAAAQKSSGANASDNVVVVQLDGAILGYTTPALAKHMAT 666
Query: 409 HIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R K +P DLE+G+VP S G YPGLYLF++ +R +RPVR + N ID
Sbjct: 667 ALRIWKTEGLHHVPLDLEIGFVPTSRAGQYPGLYLFSNRARMLRPVRLL-----HNNRID 721
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
L+GPFEQV+++I C D +TH E+ PT +LSV+AN TP+SD+NQSPRN+YQ
Sbjct: 722 LVGPFEQVYLDIAC----DPSEIIPGISTHVELAPTSILSVLANLTPFSDYNQSPRNVYQ 777
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
QM KQTM +S ++ R D KLY +QTPQTP+VR Y KY D+YP GTNA+VAV++Y
Sbjct: 778 AQMMKQTMGTASTSVSRRTDNKLYRIQTPQTPVVRNELYNKYGFDDYPNGTNAVVAVISY 837
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS---------RMFRKSN 639
TGYDMEDAMILNKS+ ERG +G +Y++ETVDL + ++ SS R +
Sbjct: 838 TGYDMEDAMILNKSAHERGFGYGTVYKSETVDLRDLKGKASSSSVPTLHFGFAPNSRPTE 897
Query: 640 IEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV------D 693
+++ LD DGLP+VGQ + EP C+ ++ + T K KG E YVD V +
Sbjct: 898 AQRAILDQDGLPYVGQKVLAGEPICAYWDEVSGKTMFKKFKGDEYAYVDTVRLLGSDAGS 957
Query: 694 VKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIIN 753
+ QKV I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IIN
Sbjct: 958 GGGDSECQKVQIMLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIIN 1016
Query: 754 PHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLR 813
PHAFPSRMTI ML+ES+A K G++HG ++TPF + +D +E G+ L+
Sbjct: 1017 PHAFPSRMTIGMLIESIAGKAGAMHGIAQDSTPF--TFSEDFTPTEF-------FGEQLK 1067
Query: 814 EKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXX 873
G+N+ G E +YSG+ G+EL +I++G VYYQRLRHMV+DKFQVR+TG V +TRQP
Sbjct: 1068 AAGYNHVGNEPMYSGITGQELRADIYLGVVYYQRLRHMVNDKFQVRTTGPVHALTRQPIK 1127
Query: 874 XXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKL 933
FGEMERD+LLAHG +Y+L DRL CSDY + VC CGS+L+ F
Sbjct: 1128 GRKRAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDASAAS 1187
Query: 934 P-------RREIGGLPPRKAPKKVICHACQ------------------------------ 956
R G P P C C+
Sbjct: 1188 HGGAVSSIDRTTQGTTPILGPNGEFCRVCRAEDEVRRQQGLEPLRGKRLPVGGVEAHIGI 1247
Query: 957 ---------TSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
T ++ VA+PYV +YL AE AAM IKM+ ++
Sbjct: 1248 PHSNVISNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGVS 1289
>M9MBL9_9BASI (tr|M9MBL9) RNA polymerase I, second largest subunit OS=Pseudozyma
antarctica T-34 GN=PANT_7d00204 PE=4 SV=1
Length = 1282
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1056 (42%), Positives = 618/1056 (58%), Gaps = 112/1056 (10%)
Query: 5 RNSFSQRREGYTDKAVVIRCV-RADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
R SF +R Y++KA+VIRC+ R D S+T ++YL N L F + +EY++PV +VL
Sbjct: 267 RPSFEKRGPSYSNKAIVIRCLHRDDLISVTNAVHYLHNGGLTLRFSWRKQEYMVPVVMVL 326
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KAL+D +D EI ++ +G + DR +++ +Q +L++ QCL Y
Sbjct: 327 KALVDATDKEIFASIV----------QGDFDNTFLTDRVELLLRNFKQYTLWSGHQCLEY 376
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+G F+ +L ++ + V ++ VHLD +K+ +LIFM+QKL+SLV G S
Sbjct: 377 LGSKFRVVLGCPEDWTDAQVGSELIHRIFLVHLDSPREKYKMLIFMIQKLYSLVAGESCA 436
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR----KSGTFDFSEIFVVKKCF 239
DN DS Q+ E+L+PG L+ +KE++++ + + + ++ R K DF + +KK
Sbjct: 437 DNADSPQHHEILMPGFLVGQIVKERIDEAVGNIRAQIARDVRMKLKGVDFYDARYIKKSV 496
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
K I I + L TG L + +GLDLQQ +G+T+ A++LN+ R+L+HFR+VHRGA F
Sbjct: 497 AKVNID-IGVKIASFLATGNLSSPSGLDLQQTSGFTIMAEKLNFARYLAHFRSVHRGAFF 555
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH + TCR+T+ + +
Sbjct: 556 AELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHFSHTCRMTTR-----------QPDV 604
Query: 360 SILDILVDS-GMTQLVPKL----LLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
S L L+ S GMT+ + + V LDG I+G + I +R K
Sbjct: 605 SHLHALLTSLGMTEAAFSVGGGSAHGANKNNIVVQLDGAILGYTTPALAKHIATALRIWK 664
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
+P DLE+G+VP S G YPGLYLF++ SR +RPVR + N IDL+GP+E
Sbjct: 665 TEGLHNVPLDLEIGFVPTSKSGQYPGLYLFSNRSRMIRPVRLL-----HNNKIDLVGPYE 719
Query: 475 QVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
QV+++I C D ++H E+ PT +LSV+AN TP+SD+NQSPRN+YQ QM KQ
Sbjct: 720 QVYLDIAC----DPSEIIQGVSSHVELAPTSILSVLANLTPFSDYNQSPRNVYQTQMMKQ 775
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM +S I R D KLY +Q+PQTP+VR Y KY D+YP GTNAIVAV++YTGYDME
Sbjct: 776 TMGTASTAISRRTDNKLYRIQSPQTPVVRPELYNKYGFDDYPNGTNAIVAVISYTGYDME 835
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRM-----FRKSNIEKSKL 645
DAMILNKS+ ERG +G +Y++ETVDL + S S P+ +R S +++ L
Sbjct: 836 DAMILNKSAHERGFGYGTVYKSETVDLRDLRGKAASASVPTLHFGFAPNYRASEAQRAIL 895
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV------DVKNKKD 699
D DGLP++GQ + EP C+ ++ + T K KG E YVD V + +
Sbjct: 896 DQDGLPYIGQKVMAGEPICAYWDEVSGKTSFKKFKGDEYAYVDTVRLLGADGGSGGGDSE 955
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
QKV I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFPS
Sbjct: 956 CQKVQIMLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHAFPS 1014
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K G++HG ++TPF + +D ++ G+ L+ G+N+
Sbjct: 1015 RMTIGMLIESIAGKAGAMHGLAQDSTPF--TFSEDFTPTQF-------FGEQLKAAGYNH 1065
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
G E +YSG+ G+EL +I++G VYYQRLRHMV+DKFQVR+TG V +TRQP
Sbjct: 1066 VGNEPMYSGITGQELRADIYLGVVYYQRLRHMVNDKFQVRTTGPVHALTRQPIKGRKRAG 1125
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
FGEMERD+LLAHG +Y+L DRL CSDY + VC CGS+L+ F +
Sbjct: 1126 GIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDHSHSGAGGAMS 1185
Query: 940 -------GLPPRKAPKKVICHACQ------------------------------------ 956
G P P C C+
Sbjct: 1186 TIDVTTQGTTPVLGPNGEFCRVCRAEDEVRRQQGLEPLRGKRQPIGGAEATIGIPAHNVI 1245
Query: 957 ---TSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
T ++ VA+PYV +YL AE AAM IKM+ L+
Sbjct: 1246 NNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFALS 1281
>Q4PFI0_USTMA (tr|Q4PFI0) DNA-directed RNA polymerase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=UM01133.1 PE=3 SV=1
Length = 1289
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1062 (41%), Positives = 624/1062 (58%), Gaps = 118/1062 (11%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQ-SSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
R SF +R Y++KA+VIRC+ D S+T ++YL N + F + +EY++PV +VL
Sbjct: 268 RPSFEKRGPSYSNKAIVIRCLHKDDLISVTNAVHYLHNGGLTMRFSWRKQEYMVPVVMVL 327
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KAL+D +D EI ++ +G + DR +++ +Q SL++ QCL Y
Sbjct: 328 KALVDATDKEIFASIV----------QGDFENTFLTDRVELLLRNFKQYSLWSGHQCLEY 377
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+G F+ +L ++ + V ++ + VHLD DK+ +LIFM+QKL+SLV G S
Sbjct: 378 LGSKFRVVLGCPEDYTDAQVGTELISRILLVHLDSPRDKYKMLIFMIQKLYSLVAGESCA 437
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR----KSGTFDFSEIFVVKKCF 239
DN DS Q+ E+L+PG L+ +KE++++ + + + ++ R K DF + +KK
Sbjct: 438 DNADSPQHHEILMPGFLVGQIIKERIDEAVGNIRAQIARDVRMKVKGLDFFDSKYIKKTV 497
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
K I I + L TG L + +GLDLQQ +G+T+ A++LN+ R+L+HFR+VHRGA F
Sbjct: 498 SKVNID-IGVKIASFLATGNLSSPSGLDLQQTSGFTIMAEKLNFARYLAHFRSVHRGAFF 556
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH + TCR+T+ Q +
Sbjct: 557 AELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHFSHTCRMTT---RQPDVS------- 606
Query: 360 SILDILVDSGMTQLVPKLLLPGPP---------EVLTVLLDGCIVGCIPSGEVEKIVAHI 410
I +L GMT+ + G ++ V LDG I+G + + +
Sbjct: 607 HIHALLSGLGMTEAAFAIGAVGAASQRDTDARDNMVVVQLDGAILGYTTPALAKHMATAL 666
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R K +P DLE+G+VP S G YPGLYLF++ +R +RPVR + N ID++
Sbjct: 667 RIWKTEGLHHVPLDLEIGFVPTSRAGQYPGLYLFSNRARMMRPVRLL-----HNNKIDMV 721
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
GPFEQV+++I C D +TH E+ PT +LSV+AN TP+SD+NQSPRN YQ Q
Sbjct: 722 GPFEQVYLDIAC----DPQEVVPGVSTHVELAPTSILSVLANLTPFSDYNQSPRNCYQAQ 777
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQTM +S + R D KLY +QTPQTP+VR Y KY D+YP GTNAIVAV++YTG
Sbjct: 778 MMKQTMGTASTAVSRRTDNKLYRIQTPQTPVVRPELYNKYGFDDYPNGTNAIVAVISYTG 837
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF--------RKSNIEK 642
YDMEDAMILNKS+ ERG +G +Y++ET+DL + +S S R + ++
Sbjct: 838 YDMEDAMILNKSAHERGFGYGTVYKSETIDLRDLKGKSSSSVPTLHFGFAPNSRPTEAQR 897
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV------DVKN 696
+ LD DGLP++GQ + EP C+ ++ + T K KG E YVD V +
Sbjct: 898 AILDQDGLPYIGQKVMAGEPICAYWDEVSGKTMFKKFKGDEYAYVDTVRLLGSDAGSGGG 957
Query: 697 KKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHA 756
+ QKV I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHA
Sbjct: 958 DSECQKVQIMLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHA 1016
Query: 757 FPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKG 816
FPSRMTI ML+ES+A K G++HG ++TPF + +D +E G+ L+ G
Sbjct: 1017 FPSRMTIGMLIESIAGKAGAMHGIAQDSTPF--TFSEDFTPTEF-------FGEQLKAAG 1067
Query: 817 FNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXX 876
+N+ G E +YSG+ G+EL +I++G VYYQRLRHMV+DKFQVR+TG V +TRQP
Sbjct: 1068 YNHVGNEPMYSGITGQELRADIYLGVVYYQRLRHMVNDKFQVRTTGPVHALTRQPIKGRK 1127
Query: 877 XXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--------- 927
FGEMERD+LLAHG +Y+L DRL CSDY + VC CGS+L+ F
Sbjct: 1128 RAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDTSASSRHG 1187
Query: 928 ---------------------------------------IQPQKLPRREIGGLPPRKA-P 947
++P + R+ IGG+ A P
Sbjct: 1188 GGAISTIDVTTQGTTPILGPNGEFCRVCRAEDEVRHQQGLEPLRGKRQPIGGVEATIAIP 1247
Query: 948 KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+ + ++ + ++ VA+PYV +YL AE AAM IKM+ ++
Sbjct: 1248 QSNVINSL-SGGDLDVVAVPYVLKYLVAELAAMGIKMSFGVS 1288
>E7RA98_PICAD (tr|E7RA98) DNA-directed RNA polymerase OS=Pichia angusta (strain
ATCC 26012 / NRRL Y-7560 / DL-1) GN=HPODL_3521 PE=3 SV=1
Length = 1166
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1012 (43%), Positives = 613/1012 (60%), Gaps = 74/1012 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 195 MAIIRPSFANRGTSYSHFGVQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLIPVV 254
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGA-VGTQRVDDRARMIIEEVRQLSLFTRLQ 119
++LKALI+T+D EI ++ GA G + DR +++ + +L+++ +
Sbjct: 255 MILKALIETNDREI-----------FDGVVGADTGNSFLTDRLELLLRTYKNYNLYSQKE 303
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+G+ F+ + + S +V + V+K V VHL++N DKF +L+FM++KL+SLV G
Sbjct: 304 TLAYLGDKFRVVFGATPDMSDISVGEEVIKRIVLVHLENNEDKFRMLLFMIRKLYSLVAG 363
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVK 236
DNPD+ Q+QE+LL G L + LKEK+E++LQ+ + +++ + +FS+ +
Sbjct: 364 DCSPDNPDATQHQEILLGGFLYGMILKEKIEEYLQNIRLQVQSDINRGIAVNFSDRKYMS 423
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 424 RVFLRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMVHRG 482
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TT VRKLLPESWGFLCPVHTPDG PCGLLNH+ CRIT+ D K
Sbjct: 483 SFFAQLKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRITT------KASDVTK 536
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+ +L G++ + + GP V V LDG I+G + + + +R KV
Sbjct: 537 VP----KLLHKLGVSPTASAINISGP-NVCCVQLDGRIIGWCSHKQGKIVADTLRFWKVE 591
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP DLE+GYVP S GG YPGLYLF SR VRPVR + L E D++GPFEQV
Sbjct: 592 GHHDIPLDLEIGYVPPSSGGQYPGLYLFAGASRMVRPVRYLP-LDKE----DIVGPFEQV 646
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FM + + TH E PT +LS++AN TP+SD NQSPRNMYQCQM KQTM
Sbjct: 647 FMNVAVIPS----EIENNIHTHVEFAPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTM 702
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
+ HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV++YTGYDM+DA
Sbjct: 703 GTPGVALCHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYDMDDA 762
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDGLP 651
MI+NKS+ ERG +G +Y+ E VDL+ R DP ++ F + E K KLD+DGLP
Sbjct: 763 MIINKSADERGFGYGVVYKVEKVDLSLNRKRGDPITQHFGFGSDEWPESWKEKLDNDGLP 822
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRH 709
H+G + +P C+ Y+ T SEP +++ V + D + Q ++I++R
Sbjct: 823 HIGVHVEEGDPICAYYDDILGKTKVKTYHSSEPAFIEEVKLLGDDNGTSEFQTLSIKYRI 882
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
R P+IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI M +ES
Sbjct: 883 TRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFS-ETGIQPDVIINPHAFPSRMTIGMFVES 941
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K G+LHG +ATP++ S ES+ D G+ L+ G+NYHG E LYSGV
Sbjct: 942 LAGKAGALHGIAQDATPWKFS------ESDTPA---DYFGEQLQRAGYNYHGNEPLYSGV 992
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEMERD
Sbjct: 993 TGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTLQPVKGRKRHGGIRVGEMERD 1052
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKK 949
+L+ HG ++LL DRL CSDY +C CGS+L+T +PR + K
Sbjct: 1053 ALIGHGTSFLLQDRLLNCSDYTQTAICRSCGSLLSTQM----SVPRIGTQATTRCRRCAK 1108
Query: 950 VICHACQTSKGME-----------------TVAMPYVFRYLAAEFAAMNIKM 984
I Q + M+ TVA+P+V +YL +E +AM I+M
Sbjct: 1109 KIDRVLQNTDEMDIWEDGQGTKFIGGGDTTTVAIPFVLKYLDSELSAMGIRM 1160
>E6R7Q5_CRYGW (tr|E6R7Q5) DNA-directed RNA polymerase OS=Cryptococcus gattii
serotype B (strain WM276 / ATCC MYA-4071) GN=CGB_F1160C
PE=3 SV=1
Length = 1192
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1009 (43%), Positives = 607/1009 (60%), Gaps = 68/1009 (6%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT IRCVR D+++ T ++YL N A L F + EY++P+ ++LK
Sbjct: 226 RPSFAKRGASYTPYGCQIRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILK 285
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SD EI L +G + DR +++ + L T QCL+Y+
Sbjct: 286 ALVDASDKEIFEGLI----------QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYL 335
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
GE F+ +L + S V +L+ V VHL DKF +L+FML+KL+S V G + D
Sbjct: 336 GEKFRVVLNVPDDWSNVQVGGYLLRKVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCPD 395
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKKCFDK 241
NPDS Q+ EVLLPG L + +KE+ +D L + K +++ R F + K
Sbjct: 396 NPDSPQHHEVLLPGFLYGMIIKERFDDCLNAVKSQIQLDLRDGKARSFMDPKYFTSVLSK 455
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
T I + + L TG LV+ TGLDLQQ +G+T+ A++LN+ R+LSHFR +HRGA FA
Sbjct: 456 T-NWDIGSKLSYFLATGNLVSPTGLDLQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAE 514
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYFDSQGSIKDYFKIKIS 360
L+TTTVRKL+PESWGFLCPVHTPDG PCGLLNH++ TC+I TS D
Sbjct: 515 LKTTTVRKLMPESWGFLCPVHTPDGSPCGLLNHLSHTCQIVTSSLDVS-----------H 563
Query: 361 ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAM 420
I +L GMTQ+ + ++ + LDG ++G + +++ +R+LK +
Sbjct: 564 IPALLSAQGMTQVFASSI--DGRRMVCIQLDGKVIGYASPMKAKQLANRLRKLKTEADPK 621
Query: 421 IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEI 480
+P DLE+GYVP++ GG YPGLYLF+S SR +RPV + EN +D +G FEQV+M++
Sbjct: 622 VPLDLEIGYVPVTKGGQYPGLYLFSSRSRMMRPVTYL-----ENGKLDHLGSFEQVYMDV 676
Query: 481 RCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSS 540
++H E+ PT MLSV+AN TP+SD NQSPRNMYQCQM KQ+M S
Sbjct: 677 AITKE----EIEKGVSSHLELDPTSMLSVIANLTPFSDFNQSPRNMYQCQMGKQSMGTPS 732
Query: 541 QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILN 600
I R D K+Y LQ+ QTP+VR + Y D +P GTNAIVAV++YTGYDMEDAMILN
Sbjct: 733 TAISKRTDNKMYRLQSGQTPVVRPDLHNHYGFDNFPNGTNAIVAVISYTGYDMEDAMILN 792
Query: 601 KSSVERGMFHGQIYQTETVDL--TEQGSRSDPSSRMF------RKSNIEKSKLDSDGLPH 652
KS+ ERG +G +Y+ + DL SRS + F ++ + ++ + DGLP
Sbjct: 793 KSAHERGFGYGTVYKADIFDLKGVPGASRSAKPTLHFGLGRDVKEDHDARNIISQDGLPI 852
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHP 710
+G ++ +P C+ + +T T K KG E ++D V V + D LQK++I+ R P
Sbjct: 853 IGTKVKTGDPLCAYIDDTTGRTKFHKYKGDETAFIDEVRVLGSDAGDAELQKIHIKLRIP 912
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
R+PVIGDKFSSRHGQKGVCSQ +P +DMPF +GM+PD+IINPHAFPSRMTI M +ES+
Sbjct: 913 RSPVIGDKFSSRHGQKGVCSQKFPAIDMPFS-ESGMQPDVIINPHAFPSRMTIGMFVESM 971
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K G+LHG +ATPF+ S K +D G+ LR G+NY+G E +YSG+
Sbjct: 972 AGKAGALHGVAQDATPFKFSDKDRP---------VDYFGEQLRAAGYNYYGNEPMYSGIT 1022
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G+E +I++G VYYQRLRHMV+DKFQVR+TG VD +TRQP FGEMERD+
Sbjct: 1023 GEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGEMERDA 1082
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQP------QKLPRREIGGLPPR 944
L+AHG ++LL DRL CSDY A VC CGS+++ F + Q+ R G P
Sbjct: 1083 LIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGGGQGMQEYCRICDGHEPEH 1142
Query: 945 KAPKK-----VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
K V+ + M+ V +PYVFRYL AE A M I++ + +
Sbjct: 1143 GEESKENGVGVVMRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTV 1191
>R9P797_9BASI (tr|R9P797) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_004712 PE=4 SV=1
Length = 1288
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1061 (41%), Positives = 626/1061 (59%), Gaps = 117/1061 (11%)
Query: 5 RNSFSQRREGYTDKAVVIRCV-RADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
R SF +R Y++KA+VIRC+ + D S+T ++YL N + F + +EY++PV +VL
Sbjct: 268 RPSFEKRGPSYSNKAIVIRCLHKEDLISVTNAVHYLHNGGLTMRFSWRKQEYMVPVVMVL 327
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KAL+D +D EI ++ +G + DR +++ +Q SL++ QCL Y
Sbjct: 328 KALVDATDKEIFASIV----------QGDFENTFLTDRVELLLRNFKQYSLWSGHQCLEY 377
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+G F+ +L ++ + V ++ + VHLD +K+ +LIFM+QKL+SLV G S
Sbjct: 378 LGSKFRVVLGCPEDYTDAQVGTELINRILLVHLDSPREKYKMLIFMIQKLYSLVAGESCA 437
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR----KSGTFDFSEIFVVKKCF 239
DN DS Q+ E+L+PG L+ +KE++++ + + + ++ R K DF + +KK
Sbjct: 438 DNADSSQHHEILMPGFLVGQIIKERIDEAVSNVRAQIARDVRMKVKGVDFFDSRYIKKTV 497
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
K I I + L TG L + +GLDLQQ +G+T+ A++LN+ R+L+HFR+VHRGA F
Sbjct: 498 SKVNID-IGVKIASFLATGNLSSPSGLDLQQTSGFTIMAEKLNFARYLAHFRSVHRGAFF 556
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH + TCR+T+ Q +
Sbjct: 557 AELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHFSHTCRMTT---RQPDVSH------ 607
Query: 360 SILDILVDSGMTQLVPKLLLPG---------PPEVLTVLLDGCIVGCIPSGEVEKIVAHI 410
I +L GMT+ + G +++ V LDG I+G G + + +
Sbjct: 608 -IHALLSGLGMTEAAFAVGAVGAASQKNANVSKDIVVVQLDGAILGYTTPGLAKHMATAL 666
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R K +P DLE+G+VP S G YPGLYLF++ +R +RPVR + N ID++
Sbjct: 667 RIWKTEGLHHVPLDLEIGFVPTSRAGQYPGLYLFSNRARMMRPVRLL-----HNNKIDMV 721
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
GPFEQV+++I C D ++H E+ PT +LSV+AN TP+SD+NQSPRN YQ Q
Sbjct: 722 GPFEQVYLDIAC----DPQEVVPGVSSHVELAPTSILSVLANLTPFSDYNQSPRNCYQAQ 777
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQTM +S + R D KLY +QTPQTP+VR Y KY D+YP GTNAIVAV++YTG
Sbjct: 778 MMKQTMGTASTAVSRRTDNKLYRIQTPQTPVVRPELYNKYGFDDYPNGTNAIVAVISYTG 837
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF--------RKSNIEK 642
YDMEDAMILNKS+ ERG +G +Y++ET+DL + +S S R + ++
Sbjct: 838 YDMEDAMILNKSAHERGFGYGTVYKSETIDLRDLKGKSSSSVPTLHFGFAPNSRPTEAQR 897
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV------DVKN 696
+ LD DGLP+VGQ + EP C+ ++ + T K KG E YVD V +
Sbjct: 898 AILDQDGLPYVGQKVLAGEPICAYWDEVSGKTMFKKFKGDEYAYVDTVRLLGSDAGSGGG 957
Query: 697 KKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHA 756
+ QKV I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHA
Sbjct: 958 DSECQKVQIMLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHA 1016
Query: 757 FPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKG 816
FPSRMTI ML+ES+A K G++HG ++TPF + +D +E G+ L+ G
Sbjct: 1017 FPSRMTIGMLIESIAGKAGAMHGIAQDSTPF--TFSEDFTPTEF-------FGEQLKAAG 1067
Query: 817 FNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXX 876
+N+ G E +YSG+ G+EL +I++G VYYQRLRHMV+DKFQVR+TG V +TRQP
Sbjct: 1068 YNHVGNEPMYSGITGQELRADIYLGVVYYQRLRHMVNDKFQVRTTGPVHALTRQPIKGRK 1127
Query: 877 XXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--------- 927
FGEMERD+LLAHG +Y+L DRL CSDY + VC CGS+L+ F
Sbjct: 1128 RAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDTSTSSGHG 1187
Query: 928 --------------------------------------IQPQKLPRREIGGLPPRKA-PK 948
++P + R+ IGG+ P+
Sbjct: 1188 GSISTIDMSTQGTTPILGPNGEFCRVCRAEDEVRRQQGLEPLRGKRQPIGGVEATIGIPQ 1247
Query: 949 KVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+ ++ T ++ VA+PYV +YL AE AAM IKM+ ++
Sbjct: 1248 SNVINSL-TGGDLDVVAVPYVLKYLVAELAAMGIKMSFGVS 1287
>J9VN76_CRYNH (tr|J9VN76) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_06611 PE=3 SV=1
Length = 1176
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1018 (43%), Positives = 608/1018 (59%), Gaps = 85/1018 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT IRCVR D+++ T ++YL N A L F + EY++P+ ++LK
Sbjct: 209 RPSFAKRGASYTPYGCQIRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILK 268
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SD EI L +G + DR +++ + L T QCL+Y+
Sbjct: 269 ALVDASDKEIFEGLI----------QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYL 318
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
GE F+ +L + S V +L+ V VHL DKF +L+FML+KL+S V G + D
Sbjct: 319 GEKFRVVLNVPDDWSNVQVGGHLLRKVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCPD 378
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKKCFDK 241
NPDS Q+ EVLLPG L + +KE+ +D L + K +++ R F + K
Sbjct: 379 NPDSPQHHEVLLPGFLYGMIIKERFDDCLNAVKSQIQLDLRDGKARSFMDPKYFTSVLSK 438
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
T I + + L TG LV+ TGLDLQQ +G+T+ A++LN+ R+LSHFR +HRGA FA
Sbjct: 439 T-NWDIGSKLSYFLATGNLVSPTGLDLQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAE 497
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYFDSQGSIKDYFKIKIS 360
L+TTTVRKL+PESWGFLCPVHTPDG PCGLLNH++ TC+I TS D
Sbjct: 498 LKTTTVRKLMPESWGFLCPVHTPDGSPCGLLNHLSHTCQIVTSSLDVS-----------H 546
Query: 361 ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAM 420
I +L GMTQ+ + ++ + LDG ++G + +++ +R+LK +
Sbjct: 547 IPALLSAQGMTQVFASSI--DGRRMVCIQLDGKVIGYASPMKAKQLANRLRKLKTEVDSK 604
Query: 421 IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEI 480
+P DLE+GYVP++ GG YPGLYLF+S SR +RPV + EN +D +G FEQV+M++
Sbjct: 605 VPLDLEIGYVPVTKGGQYPGLYLFSSRSRMMRPVTYL-----ENGKLDHLGSFEQVYMDV 659
Query: 481 RCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSS 540
++H E+ PT MLSV+AN TP+SD NQSPRNMYQCQM KQ+M S
Sbjct: 660 AITKE----EIEKGVSSHVELDPTSMLSVIANLTPFSDFNQSPRNMYQCQMGKQSMGTPS 715
Query: 541 QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILN 600
I R D K+Y LQ+ QTP+VR + Y D +P GTNAIVAV++YTGYDMEDAMILN
Sbjct: 716 TAISKRTDNKMYRLQSGQTPVVRPDLHNHYGFDNFPNGTNAIVAVISYTGYDMEDAMILN 775
Query: 601 KSSVERGMFHGQIYQTETVDL--TEQGSRSDPSSRMF------RKSNIEKSKLDSDGLPH 652
KS+ ERG +G +Y+ + DL SRS + F ++ + ++ + DGLP
Sbjct: 776 KSAHERGFGYGTVYKADIFDLKGVPGASRSAKPTLHFGLGRDVKEDHDARNIISQDGLPI 835
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHP 710
+G ++ +P C+ + +T T K KG E ++D V V + D LQK++I+ R P
Sbjct: 836 IGTKVKTGDPLCAYIDDTTGRTKFHKYKGDETAFIDEVRVLGSDAGDAELQKIHIKLRIP 895
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
R+PVIGDKFSSRHGQKGVCSQ +P +DMPF +GM+PD+IINPHAFPSRMTI M +ES+
Sbjct: 896 RSPVIGDKFSSRHGQKGVCSQKFPAIDMPFS-ESGMQPDVIINPHAFPSRMTIGMFVESM 954
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K G+LHG +ATPF+ S K +D G+ LR G+NY+G E +YSG+
Sbjct: 955 AGKAGALHGVAQDATPFKFSDKDRP---------VDYFGEQLRAAGYNYYGNEPMYSGIT 1005
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G+E +I++G VYYQRLRHMV+DKFQVR+TG VD +TRQP FGEMERD+
Sbjct: 1006 GEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGEMERDA 1065
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG---------- 940
L+AHG ++LL DRL CSDY A VC CGS+++ F E+GG
Sbjct: 1066 LIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGF--------EEVGGGQGMQEYCRI 1117
Query: 941 -------LPPRKAPKK---VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
K+ +K V+ + M+ V +PYVFRYL AE A M IK+ + +
Sbjct: 1118 CDEHKHEHAEEKSKEKGVGVVMRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTV 1175
>L5LWG5_MYODS (tr|L5LWG5) DNA-directed RNA polymerase OS=Myotis davidii
GN=MDA_GLEAN10004132 PE=3 SV=1
Length = 1137
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1003 (45%), Positives = 594/1003 (59%), Gaps = 74/1003 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 193 IAMIRPKWKARGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYQKELFFLPLG 252
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V RM++EE T+
Sbjct: 253 FALKALVSFSDYQIFQELI--------KGKEDNSFLRNSVTQMLRMVMEE----GCSTQK 300
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L+ S + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 301 QVLNYLGERFRVKLSLPDWYSNEQAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFALAK 360
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKC 238
G + +NPDSL NQEVL PG L ++LKEK+E WL S K M +K+ + S + +
Sbjct: 361 GECMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSVKIGMDKKAQKTNMS---INSEN 417
Query: 239 FDKTPARAISTS--IENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K + I + E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRG
Sbjct: 418 LMKILSLGIDLTKPFEYLLATGNLRSKTGLGFLQNSGLCVVADKLNFIRYLSHFRCVHRG 477
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 478 ADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFVYTASIPA--- 534
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
+L + G+T P P P E VLLDG +VG + + A +R K
Sbjct: 535 -------LLCNLGVT---PVDGTPHRPYAECYPVLLDGVMVGWVDKELAAGVAASLRHFK 584
Query: 415 VSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
V IP +EV VP++ + YPGLYLFT+P R VRPVRN+ + E LIG
Sbjct: 585 VLREKRIPPWMEVALVPMTGKPSLYPGLYLFTTPCRLVRPVRNLELGKEE-----LIGTM 639
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQ+FM I D G TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM
Sbjct: 640 EQLFMNIAIFEDEVFAGL-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMG 694
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYD
Sbjct: 695 KQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPCMYDHYDMDNYPIGTNAIVAVISYTGYD 754
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGL 650
MEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K ++ KLD DGL
Sbjct: 755 MEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRTVQKLDEDGL 814
Query: 651 PHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFR 708
P +G ++ +PY S N +T + + K E VD + V + + V I R
Sbjct: 815 PFIGAQLQYGDPYYSYVNLNTGESSVMFYKSKENCIVDNIKVCSNDSGSGKFKCVCITMR 874
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+E
Sbjct: 875 IPRNPTIGDKFASRHGQKGILSRLWPTEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIE 933
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG
Sbjct: 934 SMAGKSAALHGLCHDATPFTFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSG 984
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMER
Sbjct: 985 ISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMER 1044
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP- 947
D+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1045 DALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAM 1093
Query: 948 --KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1094 RNRKYNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1136
>G1P3I0_MYOLU (tr|G1P3I0) DNA-directed RNA polymerase (Fragment) OS=Myotis
lucifugus PE=3 SV=1
Length = 1137
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1003 (45%), Positives = 596/1003 (59%), Gaps = 74/1003 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 193 IAMIRPKWKARGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYQKELFFLPLG 252
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V RM+++E T+
Sbjct: 253 FALKALVSFSDYQIFQELI--------KGKEDNSFFRNSVTQMLRMVMDE----GCSTQK 300
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L+ S + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 301 QVLNYLGERFRVKLSLPDWYSNEQAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFALAK 360
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKC 238
G + +NPDSL NQEVL PG L ++LKEK+E WL S K M +K+ + S + +
Sbjct: 361 GECMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSVKIGMDKKAQKTNMS---INSEN 417
Query: 239 FDKTPARAISTS--IENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K + I + E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRG
Sbjct: 418 LMKILSLGIDLTKPFEYLLATGNLRSKTGLGFLQNSGLCVVADKLNFIRYLSHFRCVHRG 477
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 478 ADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFVYTASIPA--- 534
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
+L + G+T P P P E VLLDG +VG + + A +R K
Sbjct: 535 -------LLCNLGVT---PVDGTPHRPYAECYPVLLDGVMVGWVDKELAASVAASLRHFK 584
Query: 415 VSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
V IP +EV VP++ + YPGLYLFT+P R VRPVRN+ + E LIG
Sbjct: 585 VLREKRIPPWMEVALVPMTGKPSLYPGLYLFTTPCRLVRPVRNLELGKEE-----LIGTM 639
Query: 474 EQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
EQ+FM I + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM K
Sbjct: 640 EQLFMNIAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGK 695
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDM
Sbjct: 696 QTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPCMYDHYDMDNYPIGTNAIVAVISYTGYDM 755
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGLP 651
EDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K ++ KLD DGLP
Sbjct: 756 EDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRTVQKLDEDGLP 815
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFR 708
+G ++ +PY S N +T + + K E VD + V D + K + V I R
Sbjct: 816 FIGAQLQYGDPYYSYVNLNTGESSVMFYKSKENCIVDNIKVCSNDTGSGK-FKCVCITMR 874
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+E
Sbjct: 875 IPRNPTIGDKFASRHGQKGILSRLWPTEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIE 933
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG
Sbjct: 934 SMAGKSAALHGLCHDATPFTFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSG 984
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMER
Sbjct: 985 ISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMER 1044
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP- 947
D+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1045 DALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAM 1093
Query: 948 --KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1094 RNRKYNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1136
>I2G6C2_USTH4 (tr|I2G6C2) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_01716 PE=3 SV=1
Length = 1289
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1061 (42%), Positives = 617/1061 (58%), Gaps = 116/1061 (10%)
Query: 5 RNSFSQRREGYTDKAVVIRCV-RADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
R SF +R Y++KA+VIRC+ + D S+T ++YL N L F + +EY++PV +VL
Sbjct: 268 RPSFEKRGPSYSNKAIVIRCLHKEDLISVTNAVHYLHNGGLTLRFSWRKQEYMVPVVMVL 327
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
KAL+D +D EI ++ +G + DR +++ +Q SL++ QCL Y
Sbjct: 328 KALVDATDKEIFASIV----------QGDFENTFLTDRVELLLRNFKQYSLWSGHQCLEY 377
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+G F+ +L ++ + V ++ VHLD +K+ +LIFM+QKL+SLV G S
Sbjct: 378 LGSKFRVVLGCPEDWTDAQVGSELIHRIFLVHLDSPREKYKMLIFMVQKLYSLVAGESCA 437
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR----KSGTFDFSEIFVVKKCF 239
DN DS Q+ E+L+PG L+ +KE++++ + + + ++ R K DF + +KK
Sbjct: 438 DNADSPQHHEILMPGFLVGQIIKERIDEAVGNIRSQIARDVRMKLKGVDFYDSRYIKKTI 497
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
K I I + L TG L + +GLDLQQ +G+T+ A++LN+ R+L+HFR+VHRGA F
Sbjct: 498 AKVNID-IGVKIASFLATGNLSSPSGLDLQQTSGFTIMAEKLNFARYLAHFRSVHRGAFF 556
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A L+TT+VRKLLPE+WGFLCPVHTPDG PCGLLNH + TCR+T+ Q +
Sbjct: 557 AELKTTSVRKLLPEAWGFLCPVHTPDGSPCGLLNHFSHTCRMTT---RQPGVS------- 606
Query: 360 SILDILVDSGMTQLVPKLLLPGPP---------EVLTVLLDGCIVGCIPSGEVEKIVAHI 410
I +L GMT+ + G ++ V LDG ++G + + +
Sbjct: 607 HIHALLSGLGMTEAAFAVGAVGAVGQKHAGVRDNIVVVQLDGAVLGYTTPALAKHMATAL 666
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R K +P DLE+G+VP S G YPGLYLF+S +R +RPVR + N ID++
Sbjct: 667 RIWKTEGLHHVPLDLEIGFVPTSRAGQYPGLYLFSSRARMMRPVRLL-----HNNKIDMV 721
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
GPFEQV+++I C D +TH E+ PT +LSV+AN TP+SD+NQSPRN YQ Q
Sbjct: 722 GPFEQVYLDIAC----DPAEIVPGVSTHVELAPTSILSVLANLTPFSDYNQSPRNCYQAQ 777
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQTM +S + R D KLY +QTPQTP+VR Y KY D+YP GTNAIVAV++YTG
Sbjct: 778 MMKQTMGTASTAVGRRTDNKLYRIQTPQTPVVRPELYNKYAFDDYPNGTNAIVAVISYTG 837
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPS--------SRMFRKSNIEK 642
YDMEDAMILNKS+ ERG +G +Y++ET+DL + +S S + ++ S ++
Sbjct: 838 YDMEDAMILNKSAHERGFGYGTVYKSETIDLRDLKGKSSSSVPTLHFGFAPNYKASEAQR 897
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYV------AVDVKN 696
+ LD DGLP+VGQ + EP C+ ++ + T K KG E YVD V A
Sbjct: 898 NILDQDGLPYVGQKVLAGEPICAYWDEVSGKTQFKKFKGDEYAYVDTVRLLGSDAGMGGG 957
Query: 697 KKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHA 756
+ QKV I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHA
Sbjct: 958 DGECQKVQIMLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHA 1016
Query: 757 FPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKG 816
FPSRMTI ML+ES+A K G++HG ++TPF + +D +E G+ L+ G
Sbjct: 1017 FPSRMTIGMLIESIAGKAGAMHGIAQDSTPF--TFSEDYTPTEF-------FGEQLKAAG 1067
Query: 817 FNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXX 876
+N+ G E +YSG+ G+EL +I++G VYYQRLRHMV+DKFQVR+TG V +TRQP
Sbjct: 1068 YNHVGNEPMYSGITGQELRADIYLGVVYYQRLRHMVNDKFQVRTTGPVHALTRQPIKGRK 1127
Query: 877 XXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRR 936
FGEMERD+LLAHG +Y+L DRL CSDY + VC CGS+L+ F Q
Sbjct: 1128 RAGGIRFGEMERDALLAHGTSYMLQDRLMNCSDYSTSYVCRTCGSLLSVGFDNSQSQSNG 1187
Query: 937 ---------EIGGLPPRKAPKKVICHACQ------------------------------- 956
G P P C C+
Sbjct: 1188 GGAITTIDITTQGTTPILGPNGEYCRVCRAEDEVRRQQGLEPLRGKRMPVGGVEGYIGIS 1247
Query: 957 --------TSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
T ++ VA+PYV +YL AE AAM IKM+ ++
Sbjct: 1248 QSNVINNVTGGDLDVVAVPYVLKYLVAELAAMGIKMSFGVS 1288
>A1CTA9_ASPCL (tr|A1CTA9) DNA-directed RNA polymerase OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=ACLA_082370 PE=3 SV=1
Length = 1234
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/1069 (42%), Positives = 614/1069 (57%), Gaps = 131/1069 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VRNSF +R YT + IR VR DQ+S T L+YL + + F + EYL+P
Sbjct: 216 MAIVRNSFVRRGHTYTKYGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKSEYLVPAM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + K V V DR +++ + +L +R C
Sbjct: 276 MILKALVETNDREIFEGIVGSASSK------GVSNTFVTDRVELLLRTYKGYNLHSRSSC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPADMSNEDAGTEFLRKVVLPHLGNQNVTGTQDYDKFKLVMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R SG F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFGPILRDWSNRNSGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPAFERDFLSRVVRRTNENIGGALEYFLSTGNLVSPTGLDLQQTSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGF CPVHTPDG PCGLLNH+ C I++
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFFCPVHTPDGAPCGLLNHLAHKCFIST--- 565
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLP---------GPPEVLTVLLDGCIVGC 397
D ++QL PKLL+ E +TV LDG I+G
Sbjct: 566 -------------------SDVNVSQL-PKLLVQLGVRSESSVSLEESVTVQLDGRIIGY 605
Query: 398 IPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNI 457
+ +I +R KV + IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ +
Sbjct: 606 CSPKQARQIADTVRHWKVQGTNNIPRELEIGYVPNSNGGQYPGVYMFSQAARMYRPVKYL 665
Query: 458 SILSNENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPW 516
+ +D +GPFEQ FMEI C PD G +TH E PT +LS+VAN TP+
Sbjct: 666 PL-----DKLDYVGPFEQPFMEIACLPDDLVAG-----VSTHIEFTPTNILSIVANMTPF 715
Query: 517 SDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYP 576
SD+NQSPRNMYQCQM+KQTM IQ+R D KLY LQT QTPIVR Y Y +D +P
Sbjct: 716 SDYNQSPRNMYQCQMSKQTMGTPGTAIQYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFP 775
Query: 577 TGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFR 636
GTNA+VA+++YTGYDM+DAMI+NKSS ERG HG IY+T+ L ++ SR S R
Sbjct: 776 NGTNAVVAIISYTGYDMDDAMIINKSSHERGFGHGTIYKTKIHSLDDKDSRRSKSRREIT 835
Query: 637 K-------SNIE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------TH 675
K I ++ LD DGLPHVG ++ + Y+AS+ S TH
Sbjct: 836 KLFGFAPGGEIRAEWRTTLDEDGLPHVGARVKEGSLVAAWHTVRYDASSDSYVNVDGITH 895
Query: 676 TLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLW 733
+K K +E Y+D + + + Q +++++R PR P+IGDKFSSRHGQKGVCSQLW
Sbjct: 896 FVKYKDAEEGYIDSIRIMGAETGLEPCQALSVKYRVPRKPIIGDKFSSRHGQKGVCSQLW 955
Query: 734 PDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKK 793
P VDMPF +G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S
Sbjct: 956 PAVDMPFS-ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS--- 1011
Query: 794 DNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVS 853
+ D GQ LR+ G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+
Sbjct: 1012 ------EENTAADYFGQQLRKAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVN 1065
Query: 854 DKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIA 913
DKFQVR+TG V+ +T QP GEMERDSL+AHGAA++L DRL CSD A
Sbjct: 1066 DKFQVRTTGPVNPLTAQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDSQRA 1125
Query: 914 DVCSLCGSMLATSF-----------IQPQKLPRREIGGLPPRKAPKKVICHACQTSKGME 962
+C CGS L+T I K + G P A V C C E
Sbjct: 1126 WICRDCGSFLSTQVAVSSAGSSKARIAATKNASSQHSGAPG-GASGIVRCRRCAREAVFE 1184
Query: 963 ----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLN 989
VA+P V RYL E AAM I+M +++
Sbjct: 1185 DSRAIVWEDGDGRRYVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFRVD 1233
>D8LXL2_BLAHO (tr|D8LXL2) DNA-directed RNA polymerase OS=Blastocystis hominis
GN=GSBLH_T00000670001 PE=3 SV=1
Length = 1151
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1007 (43%), Positives = 608/1007 (60%), Gaps = 82/1007 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT ++CVR D SS+TV L+YLR+ L ++++ +E+L+PV ++LK
Sbjct: 195 RPSFTKRGPEYTSLGCQMKCVREDMSSMTVTLHYLRDGRCTLRWFIRKQEFLVPVVLILK 254
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL D SD EI L +G + DR +++ E + + L TR +CL Y+
Sbjct: 255 ALKDCSDREIYEQLM----------RGDSNNTFLSDRLELLLRESKNMHLTTRRECLAYL 304
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
G F+ +L S V + +LK Y+ VHL N KF LL+ M+ KL+ L + D
Sbjct: 305 GSRFRILLYMSSRYSDVEVGEELLKRYILVHLKSNEAKFALLLEMISKLYKLANKEIPPD 364
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWL----QSGKDEMKRKSGTFDFSEIFVVKKCFD 240
N DSL N E+LL GHL+ ++LKEKLE++L Q+ E+ R D + +KK D
Sbjct: 365 NADSLMNHELLLGGHLMCMFLKEKLEEFLIGVRQNIAREVDRHKEKIDLYDTAWIKKALD 424
Query: 241 KTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFA 300
+ I +L TG ++++TGLDLQQ AGYT+ A++LN+ R+LSHFR+VHRG F
Sbjct: 425 RQ--SDIGKKAYYLLATGNIISSTGLDLQQAAGYTIVAEKLNHWRYLSHFRSVHRGQFFT 482
Query: 301 GLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKIS 360
++TT RKLLP+SWGFLC VHTPDG PCGLLNH+T TC IT+
Sbjct: 483 EMKTTQPRKLLPDSWGFLCCVHTPDGAPCGLLNHLTATCSITT----------------- 525
Query: 361 ILDILVDSGMTQLVPKL-LLPGPPEVL------TVLLDGCIVGCIPSGEVEKIVAHIREL 413
D++ + +L L L+P ++ V +G ++G + + + +R L
Sbjct: 526 --DVVPAPQLARLCQALGLVPADSPLVYGNHYVPVFFNGQLLGRVLAAQAAAFCDQLRLL 583
Query: 414 KVSSSAMIPDDLEVGYVPL-SMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGP 472
K+ A +P LE+ VP GG +P +YL T +R RPVR++ E IGP
Sbjct: 584 KLDG-AKLPACLEIVCVPAGEQGGPWPCVYLSTDAARMQRPVRHLGTGKTE-----WIGP 637
Query: 473 FEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQV++EI C + + RK TH E+ P MLS++A+ TP+SD NQSPRNMYQCQM
Sbjct: 638 LEQVYLEIACVE--EDIRKGV--TTHIEVSPANMLSLIASLTPFSDFNQSPRNMYQCQMG 693
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR D K+Y LQTPQ PIV + Y ++ D YP G N++VAV++YTGYD
Sbjct: 694 KQTMGTPGLSWTHRTDTKMYRLQTPQAPIVHNALYREFLFDSYPQGMNSVVAVISYTGYD 753
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSR--MFRK--------SNIEK 642
+EDAMILNKSS ERG H +Y++ +DL + DP+++ +F++ SN
Sbjct: 754 LEDAMILNKSSFERGFAHASVYKSHDIDLVDP---KDPATKSLIFKRPPREAIASSNPSA 810
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV-DVKNKKDLQ 701
+LD DGLP +G ++ + C++YN T T SEP YVD V + D +Q
Sbjct: 811 LRLDPDGLPPIGLFVQKGDAICAVYNTETGKTSLRFHDSSEPAYVDEVRILDGDPALGVQ 870
Query: 702 KVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRM 761
+VNI+FR+ RNPV+GDKFSSRHGQKGV S LWP +DMPF +G+ PD IINP+AFPSRM
Sbjct: 871 RVNIKFRYNRNPVVGDKFSSRHGQKGVLSVLWPQIDMPFTA-SGITPDCIINPNAFPSRM 929
Query: 762 TIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHG 821
TI ML+ES+A K G+LHG++++ATPF+ S K+ +D G+ L+ GFNY+G
Sbjct: 930 TIGMLIESMAGKSGALHGQYMDATPFQFSEKQ---------CAVDFFGEQLKAAGFNYYG 980
Query: 822 LEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 881
E LYSG++G L +I+IG VYYQRLRHMVSDK QVR+ G ++Q+TRQP
Sbjct: 981 SEPLYSGIWGDLLEADIYIGVVYYQRLRHMVSDKSQVRANGPINQLTRQPLKGRKRHGGI 1040
Query: 882 XFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGL 941
FGEMERDS++AHGA++LLH+RL SD H+A +C CGSML+ + + + ++E L
Sbjct: 1041 RFGEMERDSIIAHGASFLLHERLLNSSDRHLAVICDKCGSMLSAT---AKPMTQQEAATL 1097
Query: 942 PPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
R K++CH C+TS V MPYV RYL E AAMNIK+ +
Sbjct: 1098 SSRVP--KMVCHVCKTSTTCHLVPMPYVTRYLVNELAAMNIKVAFDV 1142
>Q4WMY3_ASPFU (tr|Q4WMY3) DNA-directed RNA polymerase OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_6G08300 PE=3 SV=1
Length = 1235
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/1062 (43%), Positives = 611/1062 (57%), Gaps = 114/1062 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR+SF +R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRSSFVRRGHTYTKFGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++KAL++T+D EI + K V V DR +++ + +L TR C
Sbjct: 276 MIMKALVETNDREIFEGIVGSATSK------GVNNTFVTDRVELLLRTYKAYNLHTRSSC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPADMSNEDAGTEFLRKIVLPHLGNQNVTEIQDYDKFKLIMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKEQLEEWMRSFGPILRDWSNRNGGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R I +E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPAFERDFLSKIVKRTNENIGGKLEYFLSTGNLVSPTGLDLQQVSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I +
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAHKCLIATS-- 566
Query: 347 SQGSIKDYFKIKISIL-DILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
+ +S L +LV G+ L + +TV LDG IVG +
Sbjct: 567 ---------DVNVSHLPKLLVQLGVRSESSVAL----EDSVTVQLDGRIVGYCSPKQARM 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KVS + IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 614 IADTVRHWKVSGTHNIPRELEIGYVPNSNGGQYPGIYMFSQAARMYRPVKYLPL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C PD G +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPDDLVAG-----VSTHIEYTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM S I++R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPSTAIEYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIHSLDDKDSRRSKSRREITKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------THTLKKKGSE 683
I ++ LD DGLPHVG ++ + Y+A++ S TH +K K +E
Sbjct: 844 GEIRAEWRTTLDEDGLPHVGARVKEGSLIAAWHTVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D + + + Q +++++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSIRIMGAETGLEPCQALSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D GQ LR+ G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGQQLRKAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+Q+T QP GEMERDSL+AHGAA++L DRL CSD A +C CGS
Sbjct: 1074 GPVNQLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDSQRAWICRDCGS 1133
Query: 922 MLATSFIQPQKLPRREIGGLPPRK-----------APKKVICHACQTSKGME-------- 962
L+T + AP V C C E
Sbjct: 1134 FLSTQVAVSSAGSSKARLAASAAAAAKNAFAQQSGAPGIVRCRRCAREAVFEDSRAVVWE 1193
Query: 963 --------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
VA+P V RYL E AAM I+M ++N
Sbjct: 1194 DGDGRRYVGGDNVTIVAVPGVLRYLDVELAAMGIRMKFWVDN 1235
>H3CAK8_TETNG (tr|H3CAK8) DNA-directed RNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=POLR1B PE=3 SV=1
Length = 1134
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/998 (44%), Positives = 602/998 (60%), Gaps = 74/998 (7%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + +RCV+ D +++ + L+YL N + L F + + LP+G LK
Sbjct: 196 RPKWKSRGQGYTQYGISMRCVKEDHTAVNMTLHYLDNGTVMLNFIYQKELFFLPLGFALK 255
Query: 65 ALIDTSDLEIRTNLKSCY--NEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLN 122
AL+D +D +I L N Y+K V + R+++E TR Q L+
Sbjct: 256 ALVDFTDFQIYQELIKGREDNSFYKKC--------VTEMLRLVME-----GCVTRSQVLS 302
Query: 123 YIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSV 182
++GE F+ + + ++ A +L+D + +HL + +KFNLL M +KLF+ +
Sbjct: 303 FLGERFRVKMNLPEWYTHQQCATILLEDCICIHLKSDAEKFNLLCLMTRKLFTFAKQECM 362
Query: 183 LDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCFDK 241
+NPDS+ QEVL PG L ++LKE++ WL S K ++K+ + S V K F+
Sbjct: 363 EENPDSITFQEVLTPGQLYLMFLKERMAAWLVSVKLACEKKATRLNLSWSADSVMKIFNM 422
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
A IS S E +L TG L + +GL + Q G V AD+LN++R+LSHFR VHRGA+FA
Sbjct: 423 --ATDISKSFEYLLATGNLSSKSGLGMLQSTGLCVVADKLNFIRYLSHFRCVHRGAAFAK 480
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISI 361
+RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I + S +S+
Sbjct: 481 MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTANCEIVAQTAS----------TVSL 530
Query: 362 LDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSA 419
+L G+T P PG + V+LDG +VG + S +V +R KV
Sbjct: 531 PALLCSLGVT---PVDGSPGQAYSDCYPVVLDGAVVGWVESDLAPAVVDALRRFKVLREK 587
Query: 420 MIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFM 478
IP E+ VP + + YP L LFT+P R +RPV+N+++ E LIG FEQ++M
Sbjct: 588 KIPPWTEIVLVPKTGKPSLYPALLLFTTPCRMMRPVQNLTLGKQE-----LIGTFEQLYM 642
Query: 479 EIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAF 538
+ G + TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM KQTM F
Sbjct: 643 NV----GVFAAEVQAGVTTHQELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGF 698
Query: 539 SSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMI 598
T R+D KLY LQTPQ+P+VR S Y Y++D YP+GTNA+VAV++YTGYDMEDAMI
Sbjct: 699 PLHTFADRSDNKLYRLQTPQSPLVRPSMYDHYSLDNYPSGTNAVVAVISYTGYDMEDAMI 758
Query: 599 LNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE---KSKLDSDGLPHVGQ 655
+NK+S ERG HG IY+TE VDL E+ D S +F + + + KLD+DGLPH+G
Sbjct: 759 VNKASWERGFAHGSIYKTEVVDLAERVKGDD--SVVFGTTPGDPRVEDKLDADGLPHIGS 816
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNP 713
++R +P+ S + +T + + E VD + V + + V I R PRNP
Sbjct: 817 VLRYGDPFYSYVDLNTGQSSVSYYRSQEACVVDNIKVCSNDSGAGRFKHVCITTRVPRNP 876
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K
Sbjct: 877 TIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMCPDILFNPHGFPSRMTIGMLIESMAGK 935
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
G+LHG +ATPF + +D L+ G+MLR G+NY+G E LYSG+ G+E
Sbjct: 936 SGALHGLSHDATPF--TFSEDTSA-------LEYFGEMLRAGGYNYYGTERLYSGLSGQE 986
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
L +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLA
Sbjct: 987 LEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVQGGIRFGEMERDALLA 1046
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKV 950
HG+++LLHDRL CSD +A VC CGS+L+ +P PP + +K
Sbjct: 1047 HGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLLEKP-----------PPYWSATRHRKT 1095
Query: 951 ICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+C C S + ++++PYVFRY AE AAMNIK+ L++
Sbjct: 1096 VCMLCGRSDSIASLSVPYVFRYFVAELAAMNIKVKLEV 1133
>F8PR90_SERL3 (tr|F8PR90) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_86669 PE=3 SV=1
Length = 1229
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1053 (42%), Positives = 622/1053 (59%), Gaps = 109/1053 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SFS R YT AV IRCVR DQSS T L+YL N SA L F + +EY++P+
Sbjct: 220 ISLIRPSFSNRGPSYTQYAVQIRCVRPDQSSATNSLHYLSNGSATLRFSWRKQEYVIPIM 279
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + + Y+ + DR +++ + +L+T QC
Sbjct: 280 LILKALVGASDKEI---FEGVMMQDYDN-------TFLTDRVELLLRSFKMYNLYTGDQC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ +L ++ + + +++ + VHL+ +KF +L+FML+KL+++V +
Sbjct: 330 LEYLGDKFRVVLGMPEDWTNQALGVWLIQKMILVHLETPREKFRMLLFMLRKLYAVVSSS 389
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM----KRKSGTFDFSEIFVVK 236
DNPDS Q+QEVLLPG L + +KE+LE+ L ++++ +R DF + +
Sbjct: 390 CCSDNPDSPQHQEVLLPGSLYGMIIKERLEEALNQVRNQIATDVRRAEPPPDFLDKRYIT 449
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K ++ I + N L TG L + +GLDLQQ +G+T+ A++LN+ R++SHFR +HRG
Sbjct: 450 KIINRV-NWDIGAKMSNFLATGNLTSPSGLDLQQASGFTIVAEKLNWQRYISHFRCIHRG 508
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI + + I
Sbjct: 509 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTSPLAVAHIPA--- 565
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+LV GMT+ + L V LDG ++G ++ H+R K
Sbjct: 566 -------LLVGHGMTRAFSSSI--DGRRNLCVQLDGRVIGWAKPAVARQLANHLRTWKTE 616
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P DLE+GYVP S GG YPGL+LF+S +R +RPV+ ++ N D IGPFEQV
Sbjct: 617 GRHKVPLDLEIGYVPESKGGQYPGLFLFSSRARMMRPVKYLA-----NGKDDQIGPFEQV 671
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M I P+ + G S H E PT LS++AN TP+SD NQSPRN+YQCQM KQT
Sbjct: 672 YMNIAVKPEEIEEGVSS-----HVEHAPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQT 726
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S ++HR D KLY LQT Q+P+VR + Y +D +P GTNAIVAV++YTGYDMED
Sbjct: 727 MGTPSTALKHRTDNKLYKLQTGQSPVVRPRLHNTYAMDSFPNGTNAIVAVISYTGYDMED 786
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIEKSK------- 644
AMILNKS+ ERG +G +Y+++ VDL + S + P+ +I +
Sbjct: 787 AMILNKSAHERGFGYGTVYKSQIVDLKDMRGASKSTTAPTLHFGLGDDIRTEEGSRQHAC 846
Query: 645 ---LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-- 699
LD DGLP++G + +P + + +T T +K KG E VD V + + D
Sbjct: 847 CHFLDRDGLPYIGTKLDSGDPIAAYVDDTTGRTKFVKYKGDEQALVDEVRLLGGDAGDTE 906
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQK++I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFPS
Sbjct: 907 LQKLHITLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFT-ESGMQPDVIINPHAFPS 965
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K G++HG +ATPF+ S ++D +D G+ L G+NY
Sbjct: 966 RMTIGMLVESMAGKAGAMHGLAQDATPFQFS-EEDTA--------VDYFGEQLLAAGYNY 1016
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E +YSG+ GKE +I+IG VYYQRLRHMV DKFQVR+TG VD VT QP
Sbjct: 1017 YGNEPMYSGITGKEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTHQPVKGRKRAG 1076
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--IQPQKLPRRE 937
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + I ++
Sbjct: 1077 GIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDISLGEMSVGS 1136
Query: 938 IGGLPPRKAPKKVICHAC----------------------------------------QT 957
GG+ P C C ++
Sbjct: 1137 SGGI-RSTGPGGEYCRVCRATAEEEEDRARQALATGQNPRHGTHSDITVAISSQNVLGRS 1195
Query: 958 SKG--METVAMPYVFRYLAAEFAAMNIKMTLKL 988
+KG ++ VA+PYVFRYL AE A+M I ++L++
Sbjct: 1196 TKGGDLDVVAVPYVFRYLCAELASMGIAISLEV 1228
>F8NP09_SERL9 (tr|F8NP09) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_447311 PE=3 SV=1
Length = 1229
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1053 (42%), Positives = 622/1053 (59%), Gaps = 109/1053 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SFS R YT AV IRCVR DQSS T L+YL N SA L F + +EY++P+
Sbjct: 220 ISLIRPSFSNRGPSYTQYAVQIRCVRPDQSSATNSLHYLSNGSATLRFSWRKQEYVIPIM 279
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + + Y+ + DR +++ + +L+T QC
Sbjct: 280 LILKALVGASDKEI---FEGVMMQDYDN-------TFLTDRVELLLRSFKMYNLYTGDQC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ +L ++ + + +++ + VHL+ +KF +L+FML+KL+++V +
Sbjct: 330 LEYLGDKFRVVLGMPEDWTNQALGVWLIQKMILVHLETPREKFRMLLFMLRKLYAVVSSS 389
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM----KRKSGTFDFSEIFVVK 236
DNPDS Q+QEVLLPG L + +KE+LE+ L ++++ +R DF + +
Sbjct: 390 CCSDNPDSPQHQEVLLPGSLYGMIIKERLEEALNQVRNQIATDVRRAEPPPDFLDKRYIT 449
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K ++ I + N L TG L + +GLDLQQ +G+T+ A++LN+ R++SHFR +HRG
Sbjct: 450 KIINRV-NWDIGAKMSNFLATGNLTSPSGLDLQQASGFTIVAEKLNWQRYISHFRCIHRG 508
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI + + I
Sbjct: 509 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTSPLAVAHIPA--- 565
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+LV GMT+ + L V LDG ++G ++ H+R K
Sbjct: 566 -------LLVGHGMTRAFSSSI--DGRRNLCVQLDGRVIGWAKPAVARQLANHLRTWKTE 616
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P DLE+GYVP S GG YPGL+LF+S +R +RPV+ ++ N D IGPFEQV
Sbjct: 617 GRHKVPLDLEIGYVPESKGGQYPGLFLFSSRARMMRPVKYLA-----NGKDDQIGPFEQV 671
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M I P+ + G S H E PT LS++AN TP+SD NQSPRN+YQCQM KQT
Sbjct: 672 YMNIAVKPEEIEEGVSS-----HVEHAPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQT 726
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S ++HR D KLY LQT Q+P+VR + Y +D +P GTNAIVAV++YTGYDMED
Sbjct: 727 MGTPSTALKHRTDNKLYKLQTGQSPVVRPRLHNTYAMDSFPNGTNAIVAVISYTGYDMED 786
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIEKSK------- 644
AMILNKS+ ERG +G +Y+++ VDL + S + P+ +I +
Sbjct: 787 AMILNKSAHERGFGYGTVYKSQIVDLKDMRGASKSTTAPTLHFGLGDDIRTEEGSRQHAC 846
Query: 645 ---LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-- 699
LD DGLP++G + +P + + +T T +K KG E VD V + + D
Sbjct: 847 CHFLDRDGLPYIGTKLDSGDPIAAYVDDTTGRTKFVKYKGDEQALVDEVRLLGGDAGDTE 906
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQK++I R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFPS
Sbjct: 907 LQKLHITLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFT-ESGMQPDVIINPHAFPS 965
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K G++HG +ATPF+ S ++D +D G+ L G+NY
Sbjct: 966 RMTIGMLVESMAGKAGAMHGLAQDATPFQFS-EEDTA--------VDYFGEQLLAAGYNY 1016
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E +YSG+ GKE +I+IG VYYQRLRHMV DKFQVR+TG VD VT QP
Sbjct: 1017 YGNEPMYSGITGKEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTHQPVKGRKRAG 1076
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--IQPQKLPRRE 937
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + I ++
Sbjct: 1077 GIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDISLGEMSVGS 1136
Query: 938 IGGLPPRKAPKKVICHAC----------------------------------------QT 957
GG+ P C C ++
Sbjct: 1137 SGGI-RSTGPGGEYCRVCRATAEEEEDRARQALATGQNPRHGTHSDITVAISSQNVLGRS 1195
Query: 958 SKG--METVAMPYVFRYLAAEFAAMNIKMTLKL 988
+KG ++ VA+PYVFRYL AE A+M I ++L++
Sbjct: 1196 TKGGDLDVVAVPYVFRYLCAELASMGIAISLEV 1228
>A1DMM7_NEOFI (tr|A1DMM7) DNA-directed RNA polymerase OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=NFIA_053940 PE=3 SV=1
Length = 1232
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/1059 (43%), Positives = 611/1059 (57%), Gaps = 111/1059 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR SF +R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRGSFVRRGHTYTKFGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++K L++T+D EI + K V V DR +++ + +L TR C
Sbjct: 276 MIMKGLVETNDREIFEGIVGSATSK------GVNNTFVTDRVELLLRTYKAYNLHTRSSC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPADMSNEDAGTEFLRKIVLPHLGNQNVTETQDYDKFKLIMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKEQLEEWMRSFGPILRDWSNRNGGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R I +E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPAFERDFLSKIVKRTNENIGGKLEYFLSTGNLVSPTGLDLQQVSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I +
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAHKCLIATS-- 566
Query: 347 SQGSIKDYFKIKISIL-DILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
+ +S L +LV G+ L + +TV LDG IVG +
Sbjct: 567 ---------DVNVSHLPKLLVQLGVRSESSVAL----EDSVTVQLDGRIVGYCSPKQARM 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KVS + IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 614 IADTVRHWKVSGTHNIPRELEIGYVPNSNGGQYPGVYMFSQAARMYRPVKYLPL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C PD G +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPDDLVAG-----VSTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM I++R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTAIEYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIHSLDDKDSRRSKSRREITKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------THTLKKKGSE 683
I ++ LD DGLPHVG ++ + Y+A++ S TH +K K +E
Sbjct: 844 GEIRAEWRTTLDEDGLPHVGARVKEGSLIAAWHTVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D + + + Q +++++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSIRIMGAETGLEPCQALSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D GQ LR+ G+NY+G E LYSGV GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGQQLRKAGYNYYGNEPLYSGVTGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+Q+T QP GEMERDSL+AHGAA++L DRL CSD A +C CGS
Sbjct: 1074 GPVNQLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDSQRAWICRDCGS 1133
Query: 922 MLATSFI------QPQKLPRREIGGLPPRK--APKKVICHACQTSKGME----------- 962
L+T +L ++ AP V C C E
Sbjct: 1134 FLSTQVAVSSAGSSKARLAASAAKNAFAQQSGAPGIVRCRRCAREAVFEDSRAIVWEDGD 1193
Query: 963 -----------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
VA+P V RYL E AAM I+M ++N
Sbjct: 1194 GRRYVGGDNVTIVAVPGVLRYLDVELAAMGIRMKFWVDN 1232
>Q6C6G0_YARLI (tr|Q6C6G0) DNA-directed RNA polymerase OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=YALI0E09845g PE=3 SV=1
Length = 1165
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1017 (43%), Positives = 617/1017 (60%), Gaps = 76/1017 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF++R YT V IR VR DQSS T L+YL + + F + EYL+PV
Sbjct: 196 LAIIRKSFTKRGSNYTTFGVQIRSVRPDQSSQTNVLHYLSDGGITMRFSWRKNEYLVPVM 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + +G + T DR +++ + L ++ +
Sbjct: 256 MILKALVETNDREIFDGIVA------SEGSNSFLT----DRLELLLRNYKSYKLTSKQEN 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L ++GE F+ ++ K+ S + V + +LK + VHL DN DKF +L+FM++KL++LV
Sbjct: 306 LAFLGEKFRIVMDAPKDMSNEDVGRLMLKRVILVHLQDNTDKFRMLLFMIRKLYALVASE 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQ----SGKDEMKRKSGTFDFSEIFVVK 236
DNPD++Q+QEVLL G L + +KE++E++L + + E+++K + + +++
Sbjct: 366 CSPDNPDAVQHQEVLLGGFLYGMIIKERMEEYLSNFCATVRTELQKKKQSLHLDDPKIMQ 425
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ + I + L TG LV++TGLDLQQ GYTV +++N+ RF++HFR +HRG
Sbjct: 426 RICPRI-NEDIGRKLHYFLSTGNLVSHTGLDLQQTTGYTVIVEKINFHRFIAHFRMIHRG 484
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TT VRKLLPESWGFLCPVHTPDG PCGLLNH+ C I S+K
Sbjct: 485 SFFAELKTTDVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLI--------SVK---- 532
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
K + DI DS + QL P L P+ V+LDG I+G ++ IR+ K
Sbjct: 533 -KSDVGDI--DSVLNQLGISPAGALANTPQKSVVMLDGKIIGWCTHEIAQQAANTIRQWK 589
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V+ A +P DLEVG VP S GG YPGLYLF SRF+RPV++++ + D++GPFE
Sbjct: 590 VTGDARLPQDLEVGLVPPSRGGQYPGLYLFAEASRFMRPVKHLA-----TEKEDIVGPFE 644
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV++ + PD + + +H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 645 QVYLNVAVTPD------EITNVHSHVEYSPTNILSILANMTPFSDFNQSPRNMYQCQMGK 698
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
Q M + + HR+D K+Y LQT Q+PIVR + +Y +D +P G NA+VAV++YTGYDM
Sbjct: 699 QAMG-TPGVLTHRSDNKMYRLQTGQSPIVRAGLFDEYGLDNFPNGMNAVVAVISYTGYDM 757
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPS--SRMFRKSNIEKS---KLDSD 648
+DAMI+NKS+ ERG HG IY+TE VDLTE+ DP+ F N + LD D
Sbjct: 758 DDAMIINKSAHERGFGHGTIYKTEKVDLTEKQKPGDPTLLHFGFGPDNWPREWTQTLDVD 817
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNK-KDLQKVNIRF 707
GLP VG + +P + Y+++++ T LK K E +V+ V + + +LQK+ ++
Sbjct: 818 GLPLVGAKLSNGDPIAAYYDSNSNKTMCLKYKSGETGFVEEVKLLGDDSLGELQKITVKL 877
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R PR+PVIGDKFSSRHGQKGVCSQ WP DMPF +G++PD+IINPHAFPSRMTI M +
Sbjct: 878 RIPRSPVIGDKFSSRHGQKGVCSQKWPTYDMPFS-ESGIQPDVIINPHAFPSRMTIGMFV 936
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+AAK G+LHG +ATP++ S E G+ L + G+NYHG E +YS
Sbjct: 937 ESLAAKSGALHGMAQDATPWQFSETNTAAEY---------FGEQLLKAGYNYHGNEPMYS 987
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
GV G+EL C+I++G V+YQRLRHMV+DKFQVRSTG V+ +T QP GEME
Sbjct: 988 GVTGQELRCDIYVGVVFYQRLRHMVNDKFQVRSTGPVNPLTMQPVKGRKRSGGIRVGEME 1047
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI--------- 938
RD+L+ HG +YLL DRL CSDY +C CGS+ AT Q RR +
Sbjct: 1048 RDALIGHGTSYLLQDRLLNCSDYTQTSMCRTCGSLTATQEAQSTTGHRRGVKCRRCATQL 1107
Query: 939 ------GGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
PP + I + TVA+P+V +YL +E +AM IKM ++
Sbjct: 1108 EKDSFSWDSPPEGMWQDAIGNCFVGGDDTTTVAIPFVLKYLNSELSAMGIKMKYNID 1164
>B0Y7L8_ASPFC (tr|B0Y7L8) DNA-directed RNA polymerase OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_074260
PE=3 SV=1
Length = 1235
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1062 (43%), Positives = 610/1062 (57%), Gaps = 114/1062 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR+SF +R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRSSFVRRGHTYTKFGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++KAL++T+D EI + K V V DR +++ + +L TR C
Sbjct: 276 MIMKALVETNDREIFEGIVGSATSK------GVNNTFVTDRVELLLRTYKAYNLHTRSSC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPADMSNEDAGTEFLRKIVLPHLGNQNVTEIQDYDKFKLIMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKEQLEEWMRSFGPILRDWSNRNGGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R I +E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPAFERDFLSKIVKRTNENIGGKLEYFLSTGNLVSPTGLDLQQVSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I +
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAHKCLIATS-- 566
Query: 347 SQGSIKDYFKIKISIL-DILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
+ +S L +LV G+ L + +TV LDG IVG +
Sbjct: 567 ---------DVNVSHLPKLLVQLGVRSESSVAL----EDSVTVQLDGRIVGYCSPKQARM 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KVS + IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 614 IADTVRHWKVSGTHNIPRELEIGYVPNSNGGQYPGIYMFSQAARMYRPVKYLPL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C PD G +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPDDLVAG-----VSTHIEYTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM I++R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTAIEYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIHSLDDKDSRRSKSRREITKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------THTLKKKGSE 683
I ++ LD DGLPHVG ++ + Y+A++ S TH +K K +E
Sbjct: 844 GEIRAEWRTTLDEDGLPHVGARVKEGSLIAAWHTVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D + + + Q +++++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSIRIMGAETGLEPCQALSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D GQ LR+ G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGQQLRKAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+Q+T QP GEMERDSL+AHGAA++L DRL CSD A +C CGS
Sbjct: 1074 GPVNQLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDSQRAWICRDCGS 1133
Query: 922 MLATSFIQPQKLPRREIGGLPPRK-----------APKKVICHACQTSKGME-------- 962
L+T + AP V C C E
Sbjct: 1134 FLSTQVAVSSAGSSKARLAASAAAAAKNAFAQQSGAPGIVRCRRCAREAVFEDSRAVVWE 1193
Query: 963 --------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
VA+P V RYL E AAM I+M ++N
Sbjct: 1194 DGDGRRYVGGDNVTIVAVPGVLRYLDVELAAMGIRMKFWVDN 1235
>H2SUR9_TAKRU (tr|H2SUR9) DNA-directed RNA polymerase OS=Takifugu rubripes
GN=LOC101069107 PE=3 SV=1
Length = 1134
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/999 (44%), Positives = 599/999 (59%), Gaps = 75/999 (7%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + +RCV+ D +++ + L+YL N + L F + + LP+G LK
Sbjct: 195 RPKWKSRGQGYTQYGMAMRCVKDDHTAINMTLHYLDNGTVMLNFIYQKELFFLPLGFALK 254
Query: 65 ALIDTSDLEIRTNLKSCY--NEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLN 122
AL+D SD I L N Y+K V + R+++EE T+ + LN
Sbjct: 255 ALVDFSDFHIYQELVKGREDNSFYKKC--------VTEMLRLVMEE----GCITQSKVLN 302
Query: 123 YIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSV 182
++GE F+ + + + + A +L + V +HL N +KF +L M +KLF+ +
Sbjct: 303 FLGERFRVKMNLPEWYTNEQCAHILLDECVCIHLKTNVEKFYMLCLMTRKLFTFAKQECM 362
Query: 183 LDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCFDK 241
+NPDS+ QEVL PG L ++LKE++ WL S K ++K+ + S V K F+
Sbjct: 363 EENPDSITFQEVLTPGQLYLMFLKERMAAWLVSVKLAFEKKAARLNLSWNAENVMKIFNM 422
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
IS S E +L TG L + +GL + Q G V AD+LN++R+LSHFR VHRGA+FA
Sbjct: 423 --GADISKSFEYLLATGNLSSKSGLGMLQATGLCVVADKLNFIRYLSHFRCVHRGAAFAK 480
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISI 361
+RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I + S S+
Sbjct: 481 MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTANCEIVAQAVSTTSLPA-------- 532
Query: 362 LDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSA 419
+L G+T P PG + VLLDG +VG + S +V +R KV
Sbjct: 533 --LLCSLGVT---PVDGAPGQAYSDCYPVLLDGAVVGWVESELAPAVVDSLRRFKVLKEK 587
Query: 420 MIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFM 478
IP E+ VP + + YP L LFT+P R +RPV+N+S+ E LIG FEQ++M
Sbjct: 588 KIPAWTEIVLVPKTGKPSLYPALLLFTTPCRLMRPVQNLSVGRQE-----LIGTFEQLYM 642
Query: 479 EIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAF 538
+ G + TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM KQTM F
Sbjct: 643 NV----GIFEDEVTPGVTTHQELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGF 698
Query: 539 SSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMI 598
T R+D KLY LQTPQ+P+VR S Y Y++D YP+GTNAIVAV++YTGYDMEDAMI
Sbjct: 699 PLHTFLDRSDNKLYRLQTPQSPLVRPSMYDHYDLDNYPSGTNAIVAVISYTGYDMEDAMI 758
Query: 599 LNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKS----NIEKSKLDSDGLPHVG 654
+NK+S ERG HG IY+TE VDL E+ D S +F +E KLD+DGLPH+G
Sbjct: 759 VNKASWERGFAHGSIYKTEVVDLAERVKGDD--SVVFGTGPGGPGVE-DKLDADGLPHIG 815
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHPRN 712
++R +P S N +T + + E VD + + + ++V I R PRN
Sbjct: 816 SVLRHGDPLYSYINLNTGQSVICYYRSQEACVVDNIKICSNDNGSGRFKRVCITTRVPRN 875
Query: 713 PVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAA 772
P IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A
Sbjct: 876 PTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMCPDILFNPHGFPSRMTIGMLIESMAG 934
Query: 773 KGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
K G+LHG +ATPF + +DN L+ G+MLR G+NY+G E LYSG+ G+
Sbjct: 935 KSGALHGLSHDATPF--TFSEDNSA-------LEHFGEMLRAGGYNYYGTERLYSGLSGE 985
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LL
Sbjct: 986 ELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVEGGIRFGEMERDALL 1045
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KK 949
AHG+++LLHDRL CSD +A VC CGS+L+ +P PP + +K
Sbjct: 1046 AHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLLEKP-----------PPYWSATRHRK 1094
Query: 950 VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+C C S+ + +V++PYVFRY AE AAMNIK+ L++
Sbjct: 1095 TVCVLCGKSESVASVSVPYVFRYFVAELAAMNIKVKLEV 1133
>K1WS88_TRIAC (tr|K1WS88) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain CBS 8904) GN=A1Q2_01872 PE=3 SV=1
Length = 1212
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/941 (46%), Positives = 591/941 (62%), Gaps = 66/941 (7%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF++R YT IRCVR DQS+ T ++YL N A L F + EY++P+ ++LK
Sbjct: 223 RPSFAKRGVSYTPYGCQIRCVRPDQSACTNTIHYLSNGGAMLRFAWRKVEYMIPLVLILK 282
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SDLEI L +G + DR +++ + +L T QCL+Y+
Sbjct: 283 ALVDASDLEIFEGLV----------QGEYDNTFLTDRVELLLRGQKSWNLQTGTQCLDYL 332
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
G+ F+ ++ + + V +LK V VHL +KF +L+FML+KL+S+V GTS D
Sbjct: 333 GDKFRVVMNCPDDWTNVQVGSYLLKKVVLVHLPQPREKFRMLLFMLRKLYSMVAGTSCPD 392
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK-----DEMKRKSGTFDFSEIF---VVK 236
NPDS Q+ EVLLPG L + +KE+ ++ L + K D + ++ +FD + F + K
Sbjct: 393 NPDSPQHHEVLLPGFLYAMIIKERFDESLNAVKAQINMDMRQGRAKSFDDPKYFPSVLTK 452
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
FD + + + L TG LV+ TGLDLQQ +G+TV A++LN+ R+LSHFR +HRG
Sbjct: 453 VNFD------VGSKLSYFLATGNLVSPTGLDLQQTSGFTVVAEKLNFYRYLSHFRCIHRG 506
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TT VRKLLPESWGFLCPVHTPDG PCGLLNH++ TC+I +K
Sbjct: 507 AFFAELKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHTCQIV--------VKPLDT 558
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
KI L L GMTQ+ + G V+ V LDG ++G + +++ +R+LK
Sbjct: 559 SKIPQL--LSAHGMTQVF-ATGIDGRTNVV-VQLDGRVIGWASPTKAKELADLLRKLKTE 614
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
A +P DLEVGYVP++ GG YPGLYLF S SR +RPV + EN +D +G FEQV
Sbjct: 615 GDARVPLDLEVGYVPVTKGGQYPGLYLFGSRSRMMRPVTYL-----ENDKMDHVGTFEQV 669
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M+I P+ + G +TH E+ PT MLSV+AN TP+SD NQSPRNMYQCQM KQT
Sbjct: 670 YMDIAIKPEEVEKGV-----STHVELDPTSMLSVLANLTPFSDFNQSPRNMYQCQMGKQT 724
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S +QHR D K Y +Q PQTPIVR S + Y D++P TNAI+AV++YTGYDMED
Sbjct: 725 MGTPSTALQHRTDNKFYRIQNPQTPIVRPSLHNDYGFDDFPNATNAILAVISYTGYDMED 784
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQG-SRSDPSSRMF------RKSNIEKSKLDSD 648
AMILNKSS ERG +G +Y+ + DL + SR+ + F + + + LD D
Sbjct: 785 AMILNKSSHERGFGYGTVYKADIFDLKDAARSRTAAPTLHFGLGRDVKPDSPWRQFLDQD 844
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIR 706
GLP +G ++ +P C+ + +T T K KG E Y+D V V + D LQK++I+
Sbjct: 845 GLPQLGTRVKSGDPLCAYIDDTTGRTKVHKYKGDETAYIDEVRVLGSDLGDSELQKIHIK 904
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R PR+PVIGDKFSSRHGQKGVCS + D+DMPF +GMRPD+IINPHAFPSRMTI M
Sbjct: 905 LRIPRSPVIGDKFSSRHGQKGVCSVKFKDIDMPFS-ESGMRPDVIINPHAFPSRMTIGMF 963
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+E +AAK G++HG+ +ATPF+ S ++E ++ G+ LR+ G+NYHG E +Y
Sbjct: 964 VEMLAAKAGAVHGQCQDATPFKFS------DAEGP---VEFFGEQLRKAGYNYHGNEPMY 1014
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SGV G+E+ +IF+ P YQRLRH V+DK+Q RSTG VD +TRQP FGEM
Sbjct: 1015 SGVTGEEMRADIFLAPCAYQRLRHQVNDKYQARSTGPVDPLTRQPVKGRKRAGGIRFGEM 1074
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF 927
ERD+L+AHG ++LL DRL CSDY A VC CGS+++ F
Sbjct: 1075 ERDALIAHGTSFLLQDRLMNCSDYSTAWVCRGCGSLISLGF 1115
>C5MG45_CANTT (tr|C5MG45) DNA-directed RNA polymerase OS=Candida tropicalis (strain
ATCC MYA-3404 / T1) GN=CTRG_05038 PE=3 SV=1
Length = 1166
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1023 (43%), Positives = 605/1023 (59%), Gaps = 98/1023 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IRCVR DQ+S T L+YL + + F + EYL+PV
Sbjct: 196 MALIRPSFGNRGASYTKYGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVT 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + G + DR +++ ++ +L ++ +
Sbjct: 256 MILKALVETNDREIFDGIVG----------NDTGNSFLTDRLELLLRTYKKYNLNSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL DN DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGATPDMSDIDVGKEVLKRIVLVHLPDNTDKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ R G +F + +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDINRGVG-INFDDRKYMT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIATVASDVSQ------ 537
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
V +TQL +P P++ V LDG IVG + + + +R K
Sbjct: 538 ---------VPKALTQLGVLPADSFAAGPDLCCVQLDGKIVGWTTHKQGKIVADTLRFWK 588
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V S +P DLE+GYVP S G YPGLYLF SR +RPV+ + + D++GPFE
Sbjct: 589 VEGSHGLPLDLEIGYVPPSNKGQYPGLYLFGGHSRMMRPVKYLPL-----DKQDILGPFE 643
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 644 QVYMNVAVTPEEIENNVHS-----HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGK 698
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM
Sbjct: 699 QTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDM 758
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+TE +DL++ R DP ++ F E K KLD+D
Sbjct: 759 DDAMIINKSADERGFGYGTVYKTEKIDLSQSRRRGDPITQHFGFGTDEWPEAWKEKLDAD 818
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + Y+ + T SEP Y++ V + D + ++ Q++ I+
Sbjct: 819 GLPMIGVKVEAGDPIVAYYDDTLGKTKVKTYHSSEPGYIEEVKLLGDETSDQEGQQLTIK 878
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M
Sbjct: 879 YRITRAPLIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMF 937
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP+ K N + + D G+ L + G+NYHG E +Y
Sbjct: 938 VESLAGKAGALHGIAQDSTPW-----KFNEQDTPA----DYFGEQLLKAGYNYHGNEPMY 988
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 989 SGATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1048
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD+L+ HG ++LL DRL CSDY VC CGS+L T P+ IG +
Sbjct: 1049 ERDALIGHGTSFLLQDRLLNCSDYTQTPVCRSCGSILTTQTTVPR------IGSM----- 1097
Query: 947 PKKVICHACQTS-----------------------KGMET--VAMPYVFRYLAAEFAAMN 981
+ C C S G +T VA+P+V +YL +E +AM
Sbjct: 1098 -ATIRCRRCAVSLDKYDGYAADADIWEDGQGKKFVGGDDTTAVAIPFVLKYLDSELSAMG 1156
Query: 982 IKM 984
IKM
Sbjct: 1157 IKM 1159
>G1QM83_NOMLE (tr|G1QM83) DNA-directed RNA polymerase (Fragment) OS=Nomascus
leucogenys GN=POLR1B PE=3 SV=1
Length = 1155
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1008 (44%), Positives = 590/1008 (58%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 211 IAMIRPKWKTRGPGYTQYGVSVHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 270
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 271 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 318
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 319 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 378
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 379 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMR 438
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 439 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 490
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 491 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 550
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L + G+T P P P E VLLDG +VG + I
Sbjct: 551 PA----------LLCNLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKEIAPGIADS 597
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 598 LRRFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLEMGKEE----- 652
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQ
Sbjct: 653 LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQ 708
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++Y
Sbjct: 709 CQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISY 768
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLD 646
TGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD
Sbjct: 769 TGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLD 828
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G ++ +PY S N +T + + K E VD + V D + K + V
Sbjct: 829 DDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCV 887
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 888 CITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTI 946
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N+HG E
Sbjct: 947 GMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFHGTE 997
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 998 RLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRF 1057
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 1058 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PP 1106
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1107 SWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1154
>F4RYP7_MELLP (tr|F4RYP7) DNA-directed RNA polymerase OS=Melampsora larici-populina
(strain 98AG31 / pathotype 3-4-7) GN=MELLADRAFT_49804
PE=3 SV=1
Length = 1214
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1032 (43%), Positives = 607/1032 (58%), Gaps = 88/1032 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF R YT A +RCVR DQSS TV L+YL N + F + EYL+PV
Sbjct: 223 IALIRPSFCNRGNFYTPFACQMRCVRPDQSSQTVTLHYLSNGNVTFRFSWRKNEYLIPVV 282
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
++LKALI SD EI L ++ +++ + DR +++ + L T
Sbjct: 283 MLLKALIGASDQEIFAGLAQNAFDDTFRT-----------DRIELLLRSFKNYHLPTSAL 331
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
CL+++G F+ +L + S + V + +L V VHL++ K+ LL+FM+QKL++LV G
Sbjct: 332 CLHFLGSKFRIVLNCPDDWSDERVGRFLLDRVVLVHLNNATSKYRLLLFMIQKLYALVGG 391
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM----KRKSGTFDFSEIFVV 235
DNPDS Q+QE+L+PGHL++ LKE+ E+++ +++M +R + +F + V
Sbjct: 392 ECCADNPDSPQHQEILMPGHLLSSILKERFEEYIGGIRNQMASDVRRGVASANFRDPKYV 451
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
+K + A I L TG LV+ TGLDLQQ +G+T+ A++LN+ R++SHFR VHR
Sbjct: 452 QKTMARVDCDA-GKRITYFLATGNLVSPTGLDLQQMSGFTLIAEKLNFYRYISHFRCVHR 510
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH C+I S +
Sbjct: 511 GAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHQCQILSSPSPSSHVPA-- 568
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+L GM+Q + + V LDG ++G K+ +R K
Sbjct: 569 --------LLTSLGMSQPFDSAV--DVKNYVCVQLDGEVIGWASLSLCFKMATALRLWKT 618
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
IP LEVG+VP GG YPGL+LF++P+R +RPV+ IS N +LIGPFEQ
Sbjct: 619 EGLEKIPPGLEVGFVPRVTGGQYPGLFLFSTPARMMRPVQLIS-----NGKTELIGPFEQ 673
Query: 476 VFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
V+++I C + +TH EI PT +LS++AN TP+SD NQSPRNMYQCQM+KQT
Sbjct: 674 VYLDIACTES----EIEKGISTHVEISPTHILSLLANLTPFSDFNQSPRNMYQCQMSKQT 729
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S HR D KLY LQT QTPIVR + + Y++D +P GTNA+VAV++YTGYDMED
Sbjct: 730 MGTPSSAFNHRTDNKLYRLQTGQTPIVRPALHDHYHMDHFPNGTNAVVAVISYTGYDMED 789
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK-----LDSDGL 650
AMILNKS ERG HG IY+++ VDL R S R F + K K L +DG+
Sbjct: 790 AMILNKSGHERGFGHGTIYKSQIVDLQPDRGRGS-SERHFGLGDDHKLKDMAQHLGADGI 848
Query: 651 PHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFR 708
+G ++ +P C+ + T K KG E +V+ + + + + + K++ + R
Sbjct: 849 AMIGSRLKRGDPLCAYVDRVTGKGGWEKYKGDEEAFVEEIRLIGNDSSTTECTKIHFKLR 908
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PR+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFPSRMTI M +E
Sbjct: 909 IPRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFT-ESGMQPDVIINPHAFPSRMTIGMFVE 967
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K G++HG +ATPFR + K E G L GFNYHG E +YSG
Sbjct: 968 SLAGKAGAMHGIAQDATPFRFNEKDTPSEY---------FGTQLLASGFNYHGNEPMYSG 1018
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G+E +I+IG VYYQRLRHMV DK+QVR+TG V++ T QP FGEMER
Sbjct: 1019 ITGEEFVADIYIGLVYYQRLRHMVGDKWQVRTTGQVEKTTHQPIKGRKRGGGIRFGEMER 1078
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQ--PQKLPRREIGGLPPR-- 944
D+LLAHG ++LL DRL CSDY A +C CG + + + ++L + GG+ +
Sbjct: 1079 DALLAHGTSFLLQDRLMNCSDYSTAWICRKCGILSSIGYENRLQEELEGIDQGGIGLQPD 1138
Query: 945 --------KAPKKVICHACQTS----------------KGMET----VAMPYVFRYLAAE 976
PK C C+ S KG+E+ + +P+VFRYL AE
Sbjct: 1139 SYSNLMKVNGPKGEFCRFCRGSEDGLGNQMGMGLEGIVKGLESHMDVIEIPFVFRYLIAE 1198
Query: 977 FAAMNIKMTLKL 988
AM IK+ LK+
Sbjct: 1199 LMAMGIKIALKV 1210
>Q6BKD3_DEBHA (tr|Q6BKD3) DNA-directed RNA polymerase OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC
2968) GN=DEHA2F22902g PE=3 SV=1
Length = 1167
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/1016 (43%), Positives = 613/1016 (60%), Gaps = 81/1016 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IRCVR DQ+S T L+YL + + F K EYL+P
Sbjct: 194 MAIIRPSFGNRGASYTKFGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWKKNEYLVPAM 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGA-VGTQRVDDRARMIIEEVRQLSLFTRLQ 119
++LKALI+T+D EI ++ GA + DR +++ +Q +L+++ +
Sbjct: 254 MILKALIETNDREI-----------FDGIIGADTSNSFLTDRLELLLRTYKQYNLYSKQE 302
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+G+ F+ + + S V K VL+ V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 303 TLAYLGDKFRIVFGSAPDVSDIEVGKEVLQRIVLVHLPNNLDKFRMLLFMIRKLYSLVAG 362
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK++++LQ+ K +++ + +F++ +
Sbjct: 363 DCCPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNIKLQIQSDINRGIAINFNDRKYMS 422
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 423 RVFLRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 481
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I + D +
Sbjct: 482 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCQIAT------EASDVSQ 535
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELKV 415
+ +++ + V P P + V LDG ++G + E KIVA +R KV
Sbjct: 536 VPVALAQLGVS-------PAHSFAAGPNLCCVQLDGKVMGWT-THEHGKIVADTLRYWKV 587
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ +P DLEVGYVP S G YPGLYLF SR +RP + + + NK D++GPFEQ
Sbjct: 588 EGNHGLPLDLEVGYVPPSTKGQYPGLYLFGGHSRMMRPTKYLPL----NKT-DILGPFEQ 642
Query: 476 VFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
V+M++ + TH E PT +LS++AN TP+SD NQSPRNMYQCQM KQT
Sbjct: 643 VYMDVAVTPA----EIENNIHTHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQT 698
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M + HR+D KLY LQT QTPIV+ S Y Y +D +P G NA+VAV++YTGYDM+D
Sbjct: 699 MGTPGVALNHRSDNKLYRLQTGQTPIVKASLYDDYGMDNFPNGMNAVVAVISYTGYDMDD 758
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDGL 650
AMI+NKS+ ERG +G +Y+ E VDL++ R DP ++ F E + KLD+DGL
Sbjct: 759 AMIINKSADERGFGYGTVYKVEKVDLSQSRRRGDPITQHFGFGTDEWPESWREKLDADGL 818
Query: 651 PHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFR 708
P +G + +P + Y+ + T +EP Y++ V + D ++ Q++ I++R
Sbjct: 819 PLIGVKVDEGDPIVAYYDDTLGRTKVKTYHSTEPAYIEEVKLLGDDSGDQEGQQITIKYR 878
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
R P+IGDKFSSRHGQKGVCS+ WP VDMPF TG++PD+IINPHAFPSRMTI M +E
Sbjct: 879 ITRQPLIGDKFSSRHGQKGVCSRKWPQVDMPFS-ETGIQPDVIINPHAFPSRMTIGMFVE 937
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K G+LHG +ATP++ S +D+ + D G+ L + G+NYHG E +YSG
Sbjct: 938 SLAGKAGALHGIAQDATPWKFS--EDDTPA-------DFFGEQLSKAGYNYHGNEPMYSG 988
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEMER
Sbjct: 989 ATGEELRADIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEMER 1048
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPR-REIGGLPPRKAP 947
D+L+ HG A+LL DRL CSDY VC CGS+L T +PR + R+
Sbjct: 1049 DALIGHGTAFLLQDRLLNCSDYTQTSVCRSCGSLLNTQ----TSVPRIGTAASIRCRRCS 1104
Query: 948 KKVICHACQ-------------------TSKGMETVAMPYVFRYLAAEFAAMNIKM 984
K+ ++ Q + TVA+P+V +YL +E AAM IKM
Sbjct: 1105 VKIESYSQQGEYVNESEIWQDGQGKKFVGGENTTTVAIPFVLKYLDSELAAMGIKM 1160
>H2R8N5_PANTR (tr|H2R8N5) DNA-directed RNA polymerase OS=Pan troglodytes GN=POLR1B
PE=2 SV=1
Length = 1135
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1011 (44%), Positives = 591/1011 (58%), Gaps = 90/1011 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCLTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T + +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMK 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGI 574
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 575 ADSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-- 632
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRN
Sbjct: 633 ---LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRN 685
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV
Sbjct: 686 MYQCQMGKQTMGFPILTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAV 745
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--S 643
++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 746 ISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQ 805
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDL 700
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 806 KLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-F 864
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSR
Sbjct: 865 KCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSR 923
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++
Sbjct: 924 MTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFY 974
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 975 GTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGG 1034
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1035 IRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP---------- 1084
Query: 941 LPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1085 -PPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>A2QVK7_ASPNC (tr|A2QVK7) DNA-directed RNA polymerase OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=An11g01770 PE=3 SV=1
Length = 1213
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1049 (42%), Positives = 612/1049 (58%), Gaps = 110/1049 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIIRGSFVRRGHTYTKYGVQIRSVRPDQTSQTNVLHYLTDGNLTFRFSWRKAEYLVPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + + + V DR +++ + + +R C
Sbjct: 276 MILKALVETNDREIFEGIVGSASSE------GIKNTFVTDRVELLLRVYKAYNTHSRAAC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF +++FM++KL
Sbjct: 330 RAYLGEKFRPVLGVPADMSNEDAGTEFLRKVVLPHLGNQNVTENQDYDKFKMILFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFS 230
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S + ++ ++G F+
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFQPILRDWSNRNGGAKFT 449
Query: 231 EIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFL 287
+ + K R+ + ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF+
Sbjct: 450 DPAFERDFLAKVVKRSNENLGGALEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRFI 509
Query: 288 SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDS 347
SHFR +HRG+ FA L+TTTVRKLLPESWGF CPVHTPDG PCGLLNH+ C I +
Sbjct: 510 SHFRMIHRGSFFAQLKTTTVRKLLPESWGFFCPVHTPDGSPCGLLNHLAHKCLIAT---- 565
Query: 348 QGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIV 407
S D I +++ + V S + V E +TV LDG I+G + I
Sbjct: 566 --SDVDTTHIPKALVQLGVRSDSSVSVT--------ESVTVQLDGRIIGYCSPKQASAIA 615
Query: 408 AHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV S IP +LE+GY+P + GG YPG+Y+F+ +R RPV+++ + +
Sbjct: 616 NTLRRWKVMGSDKIPRELEIGYIPNTNGGQYPGIYMFSQAARMYRPVKHLGL-----DKL 670
Query: 468 DLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNM 526
D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQSPRNM
Sbjct: 671 DYVGPFEQPFMEIACLPQDLISG-----VSTHIEFTPTNILSIVANMTPFSDQNQSPRNM 725
Query: 527 YQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL 586
YQCQM+KQTM IQ+R D KLY LQT QTPIVR Y Y +D +P GTNA+VA++
Sbjct: 726 YQCQMSKQTMGTPGTAIQYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVAII 785
Query: 587 AYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK-------SN 639
+YTGYDM+DAMI+NKSS ERG +G IY+T+ L E+ SR S R K
Sbjct: 786 SYTGYDMDDAMIINKSSHERGFGYGTIYKTKIHSLDEKDSRRGKSRREVTKLFGFAPGGE 845
Query: 640 IE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------THTLKKKGSEPV 685
I ++ LD DGLPH+G ++ + Y+A++ S TH +K K +E
Sbjct: 846 IRADWRATLDEDGLPHIGARVKEGSLVAAWHTVRYDAASDSYVNVDGITHFVKYKDAEEG 905
Query: 686 YVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGT 743
Y+D V + + Q +++++R PR P+IGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 906 YIDSVRILGAESGVEPGQALSVKYRIPRKPIIGDKFSSRHGQKGVCSQLWPAVDMPFS-E 964
Query: 744 TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGL 803
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 965 SGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EENT 1015
Query: 804 LLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT 863
D G LR+ G+NY G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+TG
Sbjct: 1016 AADYFGHQLRKAGYNYFGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTTGP 1075
Query: 864 VDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 923
V+Q+T QP GEMERDSL+AHGAA++L DRL CSD + +C CGS L
Sbjct: 1076 VNQLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAHILQDRLMNCSDATRSWICRDCGSFL 1135
Query: 924 ATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKGME--------------------- 962
+T ++ GG AP V C C E
Sbjct: 1136 ST------QVAVSSAGG-----APSIVRCRRCAREAVFEDSRADVWEDGDGRRYVGGDNV 1184
Query: 963 -TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
VA+P V RYL E AAM I+M ++N
Sbjct: 1185 TVVAVPGVLRYLDVELAAMGIRMKFWVDN 1213
>G7E0U6_MIXOS (tr|G7E0U6) DNA-directed RNA polymerase OS=Mixia osmundae (strain CBS
9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo03123 PE=3
SV=1
Length = 1236
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1040 (42%), Positives = 610/1040 (58%), Gaps = 99/1040 (9%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF R + YT V IR VR DQS LT L+YL+N L F + EY++P+ ++LK
Sbjct: 239 RPSFGNRGKLYTAYGVQIRSVRPDQSGLTSTLHYLKNGCLHLRFSWRKNEYMIPLMMILK 298
Query: 65 ALID--TSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLN 122
AL+D SD I + + DRA +++ + L + QC
Sbjct: 299 ALLDDEASDKNIYAGIM----------QNDFANTYYSDRAELLLRTFKDYGLRSGRQCRA 348
Query: 123 YIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSV 182
Y+G+ F+ +L ++ S + V + +L+ V VHLD+ DKF +L+FM++KL++LV G
Sbjct: 349 YLGKSFRIVLGCPEDWSNERVGRFLLERIVLVHLDEPADKFRMLLFMVRKLYALVAGDCC 408
Query: 183 LDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDFSEIFVVKKC 238
DNPDS Q+QE+L+PG L +KEKL ++L + + +M+R++ F + V+
Sbjct: 409 ADNPDSPQHQEILMPGFLYATIIKEKLSEYLDAIATQFRIDMRRQAVGATFEDTKWVRSI 468
Query: 239 FDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGAS 298
F K I T I L TG LV+++GLDLQQ +G+T+ A++LN+LRF+SHFR VHRGA
Sbjct: 469 FAKVSPN-IGTKISTFLATGNLVSSSGLDLQQASGFTIVAEKLNFLRFISHFRCVHRGAF 527
Query: 299 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIK 358
FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH C + S + D+
Sbjct: 528 FAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHKCLLVS----SAAKTDH---- 579
Query: 359 ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSS 418
+ +L GMTQ + + G V V LDG I+G E+I +R K
Sbjct: 580 --LAGLLSSMGMTQPFERRI-SGKTNV-CVQLDGRIIGWATPDTCERIAIALRRFKTEGR 635
Query: 419 AMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFM 478
+P DLEVG VP S GG YPGL+LF++ +R +RPVR ++ N + IGPFEQV++
Sbjct: 636 HKVPRDLEVGLVPPSSGGQYPGLFLFSTRARMMRPVRLLA-----NGQEEHIGPFEQVYL 690
Query: 479 EIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
I C D + G S H E T +LSV+AN TP+SD+NQSPRNMYQCQM KQTM
Sbjct: 691 NIACTADEIEAGVHS-----HVEFAATNVLSVLANLTPFSDYNQSPRNMYQCQMGKQTMG 745
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
S + HR D KLY +QT QTPIVR + + Y D YP G NA+VAV++YTGYDMEDAM
Sbjct: 746 TPSTALTHRTDNKLYRIQTGQTPIVRPALHDTYGFDGYPNGFNAVVAVISYTGYDMEDAM 805
Query: 598 ILNKSSVERGMFHGQIYQTETVDL-TEQGSRSDPSSR----MFR------KSNIEKSKLD 646
I+NKS+ ERG HG +Y++ T++L + +G+ +R +F S+ + +LD
Sbjct: 806 IINKSAYERGFGHGSVYKSHTLELASAKGAEGSAPNRGQNLIFGFGADVPASHTARQRLD 865
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV----DVKNKKDLQK 702
G+PH G ++R + Y + YN +T TH K + E Y+D V + N+ L K
Sbjct: 866 GRGIPHPGMLVRRGDIYAAYYNTTTKRTHYDKYESDEEAYIDTVRLIAGNIASNEGKLIK 925
Query: 703 VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
+++ R R P IGDKFSSRHGQKGVCSQ +P +D+PF +GM+PD+IINPHAFPSRMT
Sbjct: 926 LHLMLRIVRRPEIGDKFSSRHGQKGVCSQRFPAIDLPFS-ESGMQPDVIINPHAFPSRMT 984
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGL 822
I ML+ES+A K G+LHG +ATPF S + D ++ G+ L+ G+NYHG
Sbjct: 985 IGMLIESLAGKAGALHGFAQDATPFCYS-EDDTPQAY--------FGEQLKAAGYNYHGN 1035
Query: 823 EVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXX 882
E +YSG+ G+E +I++G VYYQRLRHMVSDK+QVR+TG VD+VTRQP
Sbjct: 1036 EPMYSGITGEEFKADIYLGMVYYQRLRHMVSDKYQVRTTGPVDKVTRQPVKGRKKGGGIR 1095
Query: 883 FGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLP 942
FGEMERD+LLAHG ++LL DRL CSDY A VC CGS+++ + + G
Sbjct: 1096 FGEMERDALLAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDQSYGTEVGLSGDL 1155
Query: 943 PRKAPKKVICHACQT--------------------------SKG--------METVAMPY 968
P C C+ KG M+ +A+P+
Sbjct: 1156 HESGPNGQYCRVCRAEEIKQKNAWLDEQPKLPLVQHRVTAIGKGKVVERRGQMDLIAVPF 1215
Query: 969 VFRYLAAEFAAMNIKMTLKL 988
VFRYL AE AAM I +++ +
Sbjct: 1216 VFRYLCAELAAMGISLSIDV 1235
>I3JW02_ORENI (tr|I3JW02) DNA-directed RNA polymerase OS=Oreochromis niloticus
GN=polr1b PE=3 SV=1
Length = 1134
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/996 (44%), Positives = 598/996 (60%), Gaps = 69/996 (6%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + +RCVR + +++ + L+YL N + L F + + LP+G LK
Sbjct: 195 RPKWKNRGQGYTQYGISMRCVREEHTAINMNLHYLENGTVMLNFIYQKELFFLPLGFALK 254
Query: 65 ALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
AL+D +D +I L K + + K V + R++ EE + TR + LNY
Sbjct: 255 ALVDFTDFQIYQELIKGREDNSFYK-------TCVSEMLRIVTEE----NCTTRSKVLNY 303
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+GE F+ + + + + A +L + + +HL + +KF LL M +KLF+ +
Sbjct: 304 LGERFRVKMNLPEWYTNEQCANFLLNECICIHLKSDVEKFYLLCLMTRKLFTFAKQECME 363
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSG--TFDFSEIFVVKKCFDK 241
+NPDS+ QEVL PG L ++LKE+L WL S K ++ T +S ++K
Sbjct: 364 ENPDSIVCQEVLTPGQLYLMFLKERLTAWLVSVKLSFDKRGSKVTGGWSSEMMIKMLNMG 423
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
T ++ S E +L TG L + TGL + Q G V AD+LN++R+LSHFR VHRGA+FA
Sbjct: 424 T---DLTRSFEYLLATGNLQSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK 480
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISI 361
+RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT +C I + S S+
Sbjct: 481 MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVALTLSTTSLPG-------- 532
Query: 362 LDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSA 419
+L G+T P PG + V+LDG +VG + + +V +R KV
Sbjct: 533 --LLCSLGVT---PVDGTPGRAFADCYPVVLDGAVVGWVEADLAPVVVESLRRFKVLREK 587
Query: 420 MIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFM 478
IP E+ VP + + YPGL+LFT+P R VRPV+N++ E LIG FEQ+++
Sbjct: 588 KIPPWTEIVLVPKTGKASLYPGLFLFTTPCRMVRPVQNLAFGKQE-----LIGTFEQLYI 642
Query: 479 EIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAF 538
+ + R + TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM KQTM F
Sbjct: 643 NVGILENEIEPRVT----THQELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGF 698
Query: 539 SSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMI 598
+ R+D KLY LQTPQ+P+VR Y Y +D YP+GTNAIVAV++YTGYDMEDAMI
Sbjct: 699 PLHSFMDRSDNKLYRLQTPQSPLVRPYMYDHYGLDNYPSGTNAIVAVISYTGYDMEDAMI 758
Query: 599 LNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-KSKLDSDGLPHVGQMI 657
+NKSS ERG HG IY+TE VDL E+ D + + + K KLD+DGLP +G ++
Sbjct: 759 VNKSSWERGFAHGSIYKTELVDLAEKVKGEDGVVFGTKPGDPKVKEKLDADGLPFIGSVL 818
Query: 658 RPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHPRNPVI 715
+ +P+ S N +T T K E VD + V + ++V I R PRNP I
Sbjct: 819 QYGDPFYSYINLNTGQTFISYYKSQEACIVDNIKVCSNDGGSGRFKRVCITVRVPRNPTI 878
Query: 716 GDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGG 775
GDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K G
Sbjct: 879 GDKFASRHGQKGILSRLWPAEDMPFT-ESGMTPDILFNPHGFPSRMTIGMLIESMAGKSG 937
Query: 776 SLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELT 835
+LHG +ATPF S E S LD G++LR G+NY+G E LYSG+ G+EL
Sbjct: 938 ALHGLGHDATPFTFS-------EENSA--LDYFGELLRAGGYNYYGTERLYSGLSGQELE 988
Query: 836 CEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHG 895
+IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLAHG
Sbjct: 989 ADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVQGGIRFGEMERDALLAHG 1048
Query: 896 AAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKVIC 952
+++LLHDRL CSD +A VC CGS+L+ +P PP + +K +C
Sbjct: 1049 SSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLLEKP-----------PPYWSSMRHRKTVC 1097
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
C S +++V++PYVFRY AE AAMNIK+ L++
Sbjct: 1098 TLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLEV 1133
>G8B918_CANPC (tr|G8B918) DNA-directed RNA polymerase OS=Candida parapsilosis
(strain CDC 317 / ATCC MYA-4646) GN=CPAR2_301060 PE=3
SV=1
Length = 1166
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1016 (43%), Positives = 607/1016 (59%), Gaps = 84/1016 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT + IR VR DQ+S T L+YL + + F K EYL+PV
Sbjct: 196 MAIIRPSFANRGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWKKNEYLVPVV 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + V + DR +++ + L ++ +
Sbjct: 256 MILKALVETNDREIFDGIVG----------HDVENSFLTDRLELLLRTFKSYHLHSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VL+ V VHL DN DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGATPDVSDIDVGKEVLQRIVLVHLPDNKDKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK++++LQ+ K ++ R G +FS+ +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNFKLQVQSDINRGVGV-NFSDRKYIT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C I + S D +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCIIAT------SATDVSQ 537
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELKV 415
+ ++ + V P P + V LDG IVG + E KIVA +R KV
Sbjct: 538 VPAALAQLGVS-------PASAFAAGPNLCCVQLDGKIVGWT-THEQGKIVADTLRFWKV 589
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ +P DLE+GYVP S G YPGLYLF SR +RPV+ + L E D++GPFEQ
Sbjct: 590 EGTHGLPLDLEIGYVPPSSKGQYPGLYLFGGHSRMMRPVKYLP-LGKE----DIVGPFEQ 644
Query: 476 VFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM KQ
Sbjct: 645 VYMNVAVTPEEIENNVHS-----HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQ 699
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM+
Sbjct: 700 TMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDMD 759
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDG 649
DAMI+NKSS ERG +G +Y+ E +DL++ R DP ++ F + E K+KLD DG
Sbjct: 760 DAMIINKSSDERGFGYGTVYKVEKIDLSQSRRRGDPITQHFGFGDDEWPEAWKTKLDDDG 819
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRF 707
P +G + +P + Y+ + T SEP Y++ V + D + Q+V I++
Sbjct: 820 FPVIGVKVEEGDPILAYYDDTLGKTKVKTYHSSEPAYIEEVKLLGDDAGDNEGQQVTIKY 879
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M +
Sbjct: 880 RITRQPIIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMFV 938
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K G+LHG +ATP++ S +S D G+ L + G+N+HG E +YS
Sbjct: 939 ESLAGKAGALHGVAQDATPWKFS---------ESDTPADYFGEQLLKAGYNFHGNEPMYS 989
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
G G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEME
Sbjct: 990 GATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEME 1049
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+L+ HG A+LL DRL CSDY +C CGS+L T +PR IG + +
Sbjct: 1050 RDALIGHGTAFLLQDRLLNCSDYTQTSICKSCGSILTTQ----TSVPR--IGSMASIRCR 1103
Query: 948 KKVI-----------------CHACQTSKG--METVAMPYVFRYLAAEFAAMNIKM 984
+ I H + G TVA+P+V +YL +E +AM IKM
Sbjct: 1104 RCSIRLDKYDSFAEDSDIWEDGHGVKFVGGDNTTTVAIPFVLKYLDSELSAMGIKM 1159
>M5GH01_DACSP (tr|M5GH01) DNA-directed RNA polymerase I polypeptide 2
OS=Dacryopinax sp. (strain DJM 731) GN=DACRYDRAFT_92403
PE=4 SV=1
Length = 1209
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/1054 (43%), Positives = 606/1054 (57%), Gaps = 117/1054 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS +R S++ R YT AV +RCVR DQ+SLT L+YL N +A L F + +EY +P+
Sbjct: 206 MSLIRPSYTNRGASYTQYAVTMRCVRPDQTSLTNSLHYLVNGTAMLRFSWRKQEYTIPIM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LK L+ SD E+ + G + DR +++ + SL T QC
Sbjct: 266 LILKCLMGASDKEVFEGIV----------MGDYQNTFLLDRVELLLRSFKNYSLPTSQQC 315
Query: 121 LNYIGEHFQPILTELKNDSYDT-VAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+G F+ +L L +D D V ++ + VHL +KF +L+FML+KL+SLV G
Sbjct: 316 LEYLGHKFRVVLN-LPDDWEDVHVGSWLINKVILVHLPAAREKFRMLLFMLRKLYSLVSG 374
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM---KRKSGTFDFSEIFVVK 236
S DNPDS QNQE+LLPG L + +KE+LED L ++ + +R+ DF +
Sbjct: 375 ASCADNPDSPQNQEILLPGSLYAMAIKERLEDALNQIRNMVTLDQRQGVPIDFHNKKYLN 434
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F K + + N L TG L++ TGLDLQQ AG+TV A++LN+ R++SHFR VHRG
Sbjct: 435 RLFKKI-NFDVGARMANFLATGNLISPTGLDLQQAAGFTVVAEKLNWYRYISHFRCVHRG 493
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH++ +C I + S I
Sbjct: 494 AFFAELKTTTVRKLLPESWGFVCPVHTPDGAPCGLLNHLSRSCLIVTSTPSVSHIPA--- 550
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+L GMT+ + + L V LDG ++G ++ +R K
Sbjct: 551 -------LLSSLGMTEAFSTHV--DGRQNLCVQLDGRVIGWASPTIAGQLAIALRLWKTE 601
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+ +P DLE+G VP S GG YPGL+LF+ +R +RPV+ + N ID IG FEQV
Sbjct: 602 AKHNVPLDLEIGLVPESKGGQYPGLFLFSQKARMMRPVKYLP-----NDRIDHIGSFEQV 656
Query: 477 FMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
+M+I + P +TH E+ PT LS++AN TP+S+ NQSPRN+YQCQM KQ
Sbjct: 657 YMDIAIEP------QEIIPNVSTHVELSPTNFLSILANLTPFSNFNQSPRNIYQCQMGKQ 710
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
+M S + R D KLY LQT Q+P+VR + Y +D +P GTNAIVAV++YTGYDME
Sbjct: 711 SMGTPSTALSRRTDNKLYRLQTGQSPVVRPELHNTYGMDHFPNGTNAIVAVISYTGYDME 770
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTE-QGS--RSDPSSRMF------RKSNIEKSKL 645
DAMI+NKS+ ERG HG IY+T +DLTE +GS RS + F R + + +
Sbjct: 771 DAMIINKSAHERGFGHGTIYKTHVLDLTEVRGSQKRSATPNIHFGIGTDIRPDDKRREFV 830
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKV 703
D DGLP VG + +P + + +T T K KG E YVD V + + D QK+
Sbjct: 831 DWDGLPFVGTRLLEGDPMGAHIDDTTGRTVFDKYKGIEVAYVDTVRLLGGDAGDTEAQKM 890
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
+ R PR PVIGDKFSSRHGQKGVCSQ WP +DMPF +GM+PD+IINPHAFPSRMTI
Sbjct: 891 QVTLRIPRPPVIGDKFSSRHGQKGVCSQKWPAIDMPFS-ESGMQPDVIINPHAFPSRMTI 949
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
M +ES+A K G+LHG +ATPF+ S + +D G+ L G+NY+G E
Sbjct: 950 GMFVESMAGKAGALHGLAQDATPFKFS---------EENTAVDFFGKQLSAAGYNYYGHE 1000
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
+YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD VTRQP F
Sbjct: 1001 SMYSGITGQEFAADIYIGVVYYQRLRHMVDDKFQVRTTGPVDPVTRQPVKGRKRAGGIRF 1060
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM---------LATSFIQPQKLP 934
GEMERD+L+AHG ++LL DRL CSDY A VC CGS+ L S + +
Sbjct: 1061 GEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDIALGESIMAGRGFS 1120
Query: 935 RREIGGLPPRKAPKKVICHAC--------------------------------------- 955
R++ G P C C
Sbjct: 1121 SRKVSG------PSGEYCRVCRGREEEKERRERAALDAPQAQAQAQARVDLTFALPNGNV 1174
Query: 956 -QTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ S M+ VA+PYVFRYL AE AAM I ++L++
Sbjct: 1175 LKKSGDMDVVAVPYVFRYLCAELAAMGIAVSLEV 1208
>A6QLS0_BOVIN (tr|A6QLS0) DNA-directed RNA polymerase OS=Bos taurus GN=POLR1B PE=2
SV=1
Length = 1135
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/1009 (44%), Positives = 590/1009 (58%), Gaps = 86/1009 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMVRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFFRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L+ + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGERFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-------E 231
G + +NPDSL NQEVL PG L ++LKEKLE WL S K + +KS + S +
Sbjct: 359 GECMEENPDSLMNQEVLTPGQLFLMFLKEKLEAWLVSIKIAIDKKSQKTNVSLNSENLMK 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF + ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR
Sbjct: 419 IFSL--------GIDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQSVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L + G+T P P P E VLLDG ++G I
Sbjct: 531 PA----------LLCNLGVT---PVDGTPHRPYSECYPVLLDGVMIGWADKEIAPGIADS 577
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGLYLFT+P R VRPV+N+ + E
Sbjct: 578 LRHFKVLREKRIPPWMEVALIPMTGKPSLYPGLYLFTTPCRLVRPVQNLELGKEE----- 632
Query: 469 LIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
LIG EQ+FM + D G TH+E+ P +LSV+AN P+SDHNQSPRNMY
Sbjct: 633 LIGTMEQIFMNVAIFEDEVLAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMY 687
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++
Sbjct: 688 QCQMGKQTMGFPLLTFQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVIS 747
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKL 645
YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KL
Sbjct: 748 YTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSERIKQGDDSLVFGVKPGDPRVLQKL 807
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQK 702
D+DGLP +G ++ +PY S N +T + K E VD + V D K +
Sbjct: 808 DNDGLPFIGAQLKYGDPYYSYLNLNTGEGFVMYYKSKENCIVDNIKVCSNDTGTGK-FKC 866
Query: 703 VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMT
Sbjct: 867 VCITMRVPRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMT 925
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGL 822
I ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+NY+G
Sbjct: 926 IGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNYYGT 976
Query: 823 EVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXX 882
E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 977 ERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIR 1036
Query: 883 FGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLP 942
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P P
Sbjct: 1037 FGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------P 1085
Query: 943 PRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
P + +K IC C S ++T+++PYVFRY AE AAMNIK+ L +
Sbjct: 1086 PSWSALRNRKYICALCNRSDTIDTISLPYVFRYFVAELAAMNIKVKLDI 1134
>G1SQ88_RABIT (tr|G1SQ88) DNA-directed RNA polymerase OS=Oryctolagus cuniculus
GN=POLR1B PE=3 SV=1
Length = 1135
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/1002 (45%), Positives = 587/1002 (58%), Gaps = 72/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMVRPKWRSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK A R V R++ EE FT+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEADSFFRNSVSQMLRIVAEE----GCFTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF LL M +KLF+L
Sbjct: 299 QVLNYLGECFRVKLNLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYLLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
G + +NPDSL NQEVL PG L ++LKEK+E WL S K + +K+ + S + K
Sbjct: 359 GECMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLTSIKIALDKKAQKTNISINTENLLK 418
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA
Sbjct: 419 VFSM--GADLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGA 476
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 477 DFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFVYTTSIPP---- 532
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+L G+T P P P E VLLDG +VG + I +R KV
Sbjct: 533 ------LLCSLGVT---PIDGAPHRPYSECYPVLLDGVMVGWVDKELAPGIADSLRLFKV 583
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV VP++ YPGLYLFT+P R VRPV+N+ + E LIG E
Sbjct: 584 LREKRIPPWMEVALVPMTGKPSLYPGLYLFTTPCRLVRPVQNLELGKEE-----LIGTME 638
Query: 475 QVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
Q+F+ + + + TH+E+ P MLSV+AN P+SDHNQSPRNMYQCQM KQ
Sbjct: 639 QLFLNVAIFED----EVLAGVTTHQELFPHSMLSVIANFIPFSDHNQSPRNMYQCQMGKQ 694
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV +YTGYDME
Sbjct: 695 TMGFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVTSYTGYDME 754
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPH 652
DAMI+NK+S ERG HG +Y+TE +DL+E+ + D S K + +LD DGLP
Sbjct: 755 DAMIVNKASWERGFAHGSVYKTEFIDLSEKIKQGDDSLVFGVKPGDPRILQRLDDDGLPF 814
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRH 709
+G ++ +PY N +T + + K E VD + V D + K + + I R
Sbjct: 815 IGTKLQYGDPYYGYLNLNTGESFVVYYKSKENCIVDNIKVCSNDTGSGK-FKCICITMRV 873
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES
Sbjct: 874 PRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIES 932
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K +LHG +ATPF S + LD G+ML+ G+N++G E LYSG+
Sbjct: 933 MAGKSAALHGLCHDATPFTFSEQNSA---------LDHFGEMLKAAGYNFYGTERLYSGI 983
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD
Sbjct: 984 SGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERD 1043
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP-- 947
+LLAHG ++LLHDRL CSD IA VC CGS+L+ +P PP +
Sbjct: 1044 ALLAHGTSFLLHDRLFNCSDRSIAHVCVECGSLLSPLLEKP-----------PPSWSAMR 1092
Query: 948 -KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1093 NRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>K9INS3_DESRO (tr|K9INS3) DNA-directed RNA polymerase OS=Desmodus rotundus PE=2
SV=1
Length = 1135
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1001 (44%), Positives = 592/1001 (59%), Gaps = 70/1001 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKARGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYQKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R++++E T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDNSFFRNSVSQMLRIVMDE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q L+Y+GE F+ L S + AK + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLDYLGERFRVKLGLPDWYSDEQAAKCLFDQCICIHLKSNTEKFYILCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKC 238
G + DNPDSL NQEVL PG L ++LKEK+E WL S K + +K+ + S I
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIGLDKKAQKTNMS-INTENLM 417
Query: 239 FDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGAS 298
++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA
Sbjct: 418 KILNLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFVRYLSHFRCVHRGAD 477
Query: 299 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIK 358
FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T TC + + F S
Sbjct: 478 FAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTATCEVVTQFVYTASSPA----- 532
Query: 359 ISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+L + G+T P P P E VLLDG ++G + + A +R KV
Sbjct: 533 -----LLCNLGVT---PVDGTPHRPHAECYPVLLDGVMIGWVDKELAPSVAASLRHFKVL 584
Query: 417 SSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
IP +EV VP++ + YPGL+LFT+P R VRPV+N+ + E LIG EQ
Sbjct: 585 REKRIPPWMEVALVPITGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LIGTMEQ 639
Query: 476 VFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+FM I + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQT
Sbjct: 640 LFMNIAVFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQT 695
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNA+VAV++YTGYDMED
Sbjct: 696 MGFPLLTYQDRSDNKLYRLQTPQSPLVRPCMYDHYDMDNYPIGTNAVVAVISYTGYDMED 755
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGLPHV 653
AMI+NK+S ERG HG +Y++E +DL+E+ + D S K ++ KLD DGLP +
Sbjct: 756 AMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRTVQKLDGDGLPFI 815
Query: 654 GQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHP 710
G ++ +PY S N +T + + K E VD + V D + K + V I R P
Sbjct: 816 GAQLQYGDPYYSYVNLNTGESSVMFYKSKENCIVDNIKVCSNDTGSGK-FKCVCITVRIP 874
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
RNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+
Sbjct: 875 RNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMAPDILFNPHGFPSRMTIGMLIESM 933
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K +LHG +ATPF S E S L+ G+ML+ G+NY+G E LYSG+
Sbjct: 934 AGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNYYGTERLYSGIS 984
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+
Sbjct: 985 GLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDA 1044
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP--- 947
LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1045 LLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRN 1093
Query: 948 KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1094 RKYNCTVCNRSDTVDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>L8GRD1_ACACA (tr|L8GRD1) DNA-directed RNA polymerase OS=Acanthamoeba castellanii
str. Neff GN=ACA1_125550 PE=3 SV=1
Length = 1139
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1014 (42%), Positives = 599/1014 (59%), Gaps = 88/1014 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R S++ + YT V IR VR DQS+ + L+YL N S L V +EY +P ++LK
Sbjct: 183 RPSWAGKGNYYTQHGVQIRSVRKDQSNQNMTLHYLSNGSCSLRISVFKQEYFIPGILILK 242
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQL-SLFTRLQCLNY 123
ALI T+D EI +L +G V + DR +I+ E + ++ T+ QCL Y
Sbjct: 243 ALISTTDREIYNSLV----------RGDVENTFLTDRVEVILREAKSYENMETKEQCLAY 292
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD--DNFDKFNLLIFMLQKLFSLVDGTS 181
+G F+ L + + V + +L Y+FVHL+ N KF+LL FM++KL+SL G
Sbjct: 293 LGSSFRIALRVPERMTDIEVGQFLLDRYIFVHLNPQKNKQKFDLLAFMIRKLYSLASGEI 352
Query: 182 VLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR-------KSG-TFDFSEIF 233
DN DS N E+LLPGH+ ++LKEK+++WL K + + K+G T++
Sbjct: 353 GPDNADSPMNFELLLPGHVYLMFLKEKMQEWLVGVKLILNKLHAMPSAKAGLTWESDPEG 412
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
++K +K + ++ L TG L+++TG+ L Q GY V A++LN+LR+ SHFR V
Sbjct: 413 YLRKAMEKN--FDLGKKVDYFLATGNLISSTGMGLMQLNGYVVVAEKLNWLRYFSHFRCV 470
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRGA FA ++TT VRKL+PESWGF CPVHTPDG PCGL+NH+T CR+ ++ Q +
Sbjct: 471 HRGAFFATMKTTAVRKLMPESWGFFCPVHTPDGAPCGLINHLTAVCRLITH---QADTR- 526
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
+ +LV G++ +L P + L V LDG ++G IP ++V +R L
Sbjct: 527 ------RMASLLVSLGVSPASQSILFPSD-QYLDVFLDGELMGFIPHAAAPQLVEKLRYL 579
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
KV IP LE+G VP + YPGLY++T+PSR +RPV+ ++ +I+ IG F
Sbjct: 580 KVKKLEDIPWTLELGLVPAGVSKQYPGLYMWTTPSRMMRPVKYLA-----TGDIEYIGSF 634
Query: 474 EQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
EQV+M I D RK TH+EI P MLSVVA TP+ D NQSPRNMYQCQMAK
Sbjct: 635 EQVYMNIAVLDED---RKDKDIFTHQEIRPMNMLSVVAGLTPFCDMNQSPRNMYQCQMAK 691
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
Q++A + QHR D K+Y +Q PQ P+ RT+ Y +Y +D+YP G NAIVAVL+YTGYDM
Sbjct: 692 QSIATPCHSFQHRTDNKIYRIQNPQAPVSRTNVYDEYELDDYPIGANAIVAVLSYTGYDM 751
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDP------------SSRMFRKSNIE 641
EDAMI+NK++ +RG H +Y+ E VD + + D + + ++
Sbjct: 752 EDAMIINKAAYQRGFGHASVYKNELVDFARKEKKGDAPKYIANPLVEDKDQQAMDEDGMQ 811
Query: 642 KSK------LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYV-AVDV 694
+K L+ DGLP G + P+ + T H + K E VD V V
Sbjct: 812 PAKKRFCEELEEDGLPAPGTRLEAGSPFYVTVDGGTGKPHLHRYKSKEEAVVDEVRVVGT 871
Query: 695 KNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINP 754
+K +Q+V+I+ R RNPVIGDKF+SRHGQKGV SQLWP +MPF +GM PD+IINP
Sbjct: 872 SSKGLIQRVSIKLRLNRNPVIGDKFASRHGQKGVMSQLWPQENMPF-SESGMSPDVIINP 930
Query: 755 HAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLRE 814
HAFPSRMTIAML+ES+A+K G+LHG F +ATPFR K +D GQ L
Sbjct: 931 HAFPSRMTIAMLIESMASKSGALHGMFQDATPFRFDEKHT---------AVDYFGQQLLA 981
Query: 815 KGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXX 874
G+NY+G E +YSG+ G EL +I++G VYYQRLRHMV DK+QVRSTG V Q+T+QP
Sbjct: 982 AGYNYYGNEPMYSGILGCELRADIYLGVVYYQRLRHMVKDKYQVRSTGPVHQLTQQPIKG 1041
Query: 875 XXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLP 934
FGEMERD LLAHG ++LL DRL CSDY + C CGS+++
Sbjct: 1042 RQKGGGIRFGEMERDCLLAHGTSFLLQDRLFKCSDYSRSWACKGCGSIIS---------- 1091
Query: 935 RREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
P +KV+C C++ G+ + +PYVFRYL E AAMNI++T+ +
Sbjct: 1092 -------PVNTKDRKVMCTFCESKDGVTAITIPYVFRYLVNELAAMNIRITMNI 1138
>K7DPC4_PANTR (tr|K7DPC4) DNA-directed RNA polymerase OS=Pan troglodytes GN=POLR1B
PE=2 SV=1
Length = 1135
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1012 (44%), Positives = 590/1012 (58%), Gaps = 92/1012 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCLTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T + +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMK 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGI 574
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 575 ADSLRHFKVLREKRIPSREEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-- 632
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
LIG EQ+FM + D G TH+E+ P +LSV+AN P+SDHNQSPR
Sbjct: 633 ---LIGTMEQIFMNVAIFEDEVFAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPR 684
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVA
Sbjct: 685 NMYQCQMGKQTMGFPILTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVA 744
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-- 642
V++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 745 VISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVL 804
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKD 699
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 805 QKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK- 863
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPS
Sbjct: 864 FKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPS 922
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N+
Sbjct: 923 RMTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNF 973
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 974 YGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQG 1033
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1034 GIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP--------- 1084
Query: 940 GLPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1085 --PPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>B7Z1W6_HUMAN (tr|B7Z1W6) DNA-directed RNA polymerase OS=Homo sapiens PE=2 SV=1
Length = 996
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1011 (44%), Positives = 591/1011 (58%), Gaps = 90/1011 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 52 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 111
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 112 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 159
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 160 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 219
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 220 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMR 279
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 280 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 331
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 332 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 391
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 392 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGI 435
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+++ E
Sbjct: 436 ADSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLALGKEE-- 493
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRN
Sbjct: 494 ---LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRN 546
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV
Sbjct: 547 MYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAV 606
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--S 643
++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 607 ISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQ 666
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDL 700
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 667 KLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-F 725
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSR
Sbjct: 726 KCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSR 784
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++
Sbjct: 785 MTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFY 835
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 836 GTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGG 895
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 896 IRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP---------- 945
Query: 941 LPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 946 -PPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 995
>G7XAW2_ASPKW (tr|G7XAW2) DNA-directed RNA polymerase OS=Aspergillus kawachii
(strain NBRC 4308) GN=AKAW_02160 PE=3 SV=1
Length = 1236
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1063 (42%), Positives = 610/1063 (57%), Gaps = 115/1063 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR SF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRGSFVRRGHTYTKYGVQIRSVRPDQTSQTNVLHYLTDGNLTFRFSWRKAEYLVPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + + + V DR +++ + + +R C
Sbjct: 276 MILKALVETNDREIFEGIVGSASSE------GIKNTFVTDRVELLLRVYKAYNTHSRAAC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF +L+FM++KL
Sbjct: 330 RAYLGEKFRPVLGVPADMSNEDAGTEFLRKVVLPHLGNQNVTENQDYDKFKMLLFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSG-TFD 228
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R +G TF
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFQPILRDWSNRNAGATFT 449
Query: 229 ---FSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F F+ K K I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ R
Sbjct: 450 DPAFERDFLAKVV--KRSNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYR 507
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
F+SHFR +HRG+ FA L+TTTVRKLLPESWGF CPVHTPDG PCGLLNH+ C I +
Sbjct: 508 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFFCPVHTPDGSPCGLLNHLAHKCLIAT-- 565
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
S D I +++ + V S + V E +TV LDG I+G +
Sbjct: 566 ----SDVDTTHIPKALVQLGVRSDSSVSVT--------ESVTVQLDGRIIGYCSPKQASA 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV S IP +LE+GY+P + GG YPG+Y+F+ +R RPV+++ +
Sbjct: 614 IANTLRRWKVMGSDKIPRELEIGYIPNTNGGQYPGIYMFSQAARMYRPVKHLGL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPQDLISG-----VSTHIEFTPTNILSIVANMTPFSDQNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM IQ+R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTAIQYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG +G IY+T+ L E+ SR S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIHSLDEKDSRRGKSRREVTKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------THTLKKKGSE 683
I ++ LD DGLPH+G ++ + Y+A++ S TH +K K +E
Sbjct: 844 GEIRADWRATLDEDGLPHIGARVKEGSLVAAWHTVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D V + + Q +++++R PR P+IGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSVRILGAESGVEPGQALSVKYRIPRKPIIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D G LR+ G+NY G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGHQLRKAGYNYFGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+Q+T QP GEMERDSL+AHGAA++L DRL CSD + +C CGS
Sbjct: 1074 GPVNQLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAHILQDRLMNCSDATRSWICRDCGS 1133
Query: 922 MLATSFI------------QPQKLPRREIGGLPPRKAPKKVICHACQTSKGME------- 962
L+T + + G AP V C C E
Sbjct: 1134 FLSTQVAVSSAGSSKARIAAAKAASNQHSGANAISGAPSIVRCRRCAREAVFEDSRADVW 1193
Query: 963 ---------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
VA+P V RYL E AAM I+M ++N
Sbjct: 1194 EDGDGRRYVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFWVDN 1236
>F5GZX4_HUMAN (tr|F5GZX4) DNA-directed RNA polymerase OS=Homo sapiens GN=POLR1B
PE=2 SV=1
Length = 1173
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1011 (44%), Positives = 591/1011 (58%), Gaps = 90/1011 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 229 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 288
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 289 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 336
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 337 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 396
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 397 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMR 456
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 457 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 508
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 509 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 568
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 569 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGI 612
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+++ E
Sbjct: 613 ADSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLALGKEE-- 670
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRN
Sbjct: 671 ---LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRN 723
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV
Sbjct: 724 MYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAV 783
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--S 643
++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 784 ISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQ 843
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDL 700
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 844 KLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-F 902
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSR
Sbjct: 903 KCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSR 961
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++
Sbjct: 962 MTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFY 1012
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 1013 GTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGG 1072
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1073 IRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP---------- 1122
Query: 941 LPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1123 -PPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1172
>H8XAX6_CANO9 (tr|H8XAX6) DNA-directed RNA polymerase OS=Candida orthopsilosis
(strain 90-125) GN=CORT_0H01080 PE=3 SV=1
Length = 1166
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1016 (43%), Positives = 608/1016 (59%), Gaps = 84/1016 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT + IR VR DQ+S T L+YL + + F K EYL+PV
Sbjct: 196 MAIIRPSFANRGASYTKYGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWKKNEYLVPVV 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + V + DR +++ + +L ++ +
Sbjct: 256 MILKALVETNDREIFDGIVGH----------DVENSFLTDRLELLLRTFKSYNLHSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VL+ V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGATPDVSDIDVGKEVLRRIVLVHLPNNEDKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK++++LQ+ K ++ R G +FS+ +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNFKLQVQSDINRGVGV-NFSDRKYIT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C I + + D +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCIIAT------TASDVSQ 537
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELKV 415
+ ++ + V P P++ V LDG IVG + E KIVA +R KV
Sbjct: 538 VPAALAQLGVS-------PANAFAAGPDLCCVQLDGKIVGWT-THEQGKIVADTLRFWKV 589
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ +P DLE+GYVP S G YPGLYLF SR +RPV+ + L E D++GPFEQ
Sbjct: 590 EGTHGLPLDLEIGYVPPSSKGQYPGLYLFGGHSRMMRPVKYLP-LGKE----DIVGPFEQ 644
Query: 476 VFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM KQ
Sbjct: 645 VYMNVAVTPEEIENNIHS-----HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQ 699
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM+
Sbjct: 700 TMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDMD 759
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDG 649
DAMI+NKS+ ERG +G +Y+ E +DL++ R DP ++ F E K+KLD DG
Sbjct: 760 DAMIINKSADERGFGYGTVYKVEKIDLSQSRRRGDPITQHFGFGEDEWPETWKTKLDDDG 819
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRF 707
P +G + +P + Y+ + T SEP Y++ V + D + Q+V I++
Sbjct: 820 FPLIGVKVEEGDPILAYYDDTLGKTKVKTYHSSEPAYIEEVKLLGDDAGDNEGQQVTIKY 879
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M +
Sbjct: 880 RITRQPIIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMFV 938
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K G+LHG +ATP++ S +S D G+ L + G+N+HG E +YS
Sbjct: 939 ESLAGKAGALHGVAQDATPWKFS---------ESDTPADYFGEQLLKAGYNFHGNEPMYS 989
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
G G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEME
Sbjct: 990 GATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEME 1049
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+L+ HG AYLL DRL CSDY +C CGS+L T +PR IG + +
Sbjct: 1050 RDALIGHGTAYLLQDRLLNCSDYTQTSICKSCGSILTTQ----TSVPR--IGSMASIRCR 1103
Query: 948 KKVI-----------------CHACQTSKG--METVAMPYVFRYLAAEFAAMNIKM 984
+ I H + G TVA+P+V +YL +E +AM IKM
Sbjct: 1104 RCSIRLDKYDGYAEDADIWEDGHGVKFVGGDNTTTVAIPFVLKYLDSELSAMGIKM 1159
>L0P9P7_PNEJ8 (tr|L0P9P7) DNA-directed RNA polymerase OS=Pneumocystis jiroveci
(strain SE8) GN=PNEJI1_003258-RB PE=3 SV=1
Length = 1198
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1028 (43%), Positives = 623/1028 (60%), Gaps = 95/1028 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR+SF + YT IRCVR D++S T L+YL + + F + EYL+PV
Sbjct: 197 MALVRSSFLNKGTHYTKFGTQIRCVRPDETSHTNTLHYLSDGNCIFRFSWRKNEYLVPVV 256
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQLSLFT 116
++LKALI+T+D EI ++ VG + D D +++ + L+
Sbjct: 257 MILKALINTNDKEIFDSI--------------VGKDKKDTILVDHVEILLRTYKNYELYN 302
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ Q L Y+GE F+ +L ++ +++ V + +LK V VHLD+N+DKF +LIFM++KL+SL
Sbjct: 303 QKQTLQYLGEKFRVVLNVDEDLTHERVGQELLKKIVLVHLDNNYDKFRMLIFMIRKLYSL 362
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFDFSEI 232
V G DNPDS QNQE+LL G L + +KEK+ED+L S ++ ++++ + + +F +
Sbjct: 363 VFGQCCPDNPDSAQNQEILLGGFLYGMIIKEKIEDYLLSLRNTVIQDLRKPNNSVNFFDK 422
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
+ K F + P I + ++ L TG LV++TGLDLQQ G+T+ A++LN+ R+LSHFR
Sbjct: 423 KYISKLFQRVP-NDIGSKLQYFLSTGNLVSSTGLDLQQTTGFTIIAEKLNFYRYLSHFRT 481
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIK 352
VHRGA FA +++ TVRKLLPE+WGF+CPVHTPDG PCGLLNH+T C+I + + SI
Sbjct: 482 VHRGAFFADVKSVTVRKLLPEAWGFICPVHTPDGAPCGLLNHLTSKCKIVTSNINVDSIP 541
Query: 353 DYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVG-CIPSGEVEKIVAHI- 410
Y +K+ VD L E TV L+G I+G C+ EV +AH+
Sbjct: 542 -YLLVKLG-----VDPTSNML--------GTEYSTVQLNGKIIGYCMH--EVASRIAHLL 585
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R K S IP +LE+G +P S GG Y GLY+F+S SR +RPV+ + + NK D +
Sbjct: 586 RYWKTEKSHNIPLELEIGLIPKSEGGQYHGLYIFSSKSRMIRPVKYLPL----NKE-DFV 640
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
G FEQV++ I G + + +H EI+ + M S++A+ TP+SD NQSPRNMYQCQ
Sbjct: 641 GSFEQVYLNISLGSHFSKGVDTQY--SHSEINTSNMFSILASLTPFSDFNQSPRNMYQCQ 698
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
MAKQTM + ++++R D KLY LQT QTPIVR+ TY Y +D +P GTNAIVAV++YTG
Sbjct: 699 MAKQTMGTPASSLRYRTDNKLYLLQTGQTPIVRSKTYDLYGLDNFPNGTNAIVAVISYTG 758
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKL 645
YDMEDA+++NKSS ERG + IY++E VDL ++ + + F N + KL
Sbjct: 759 YDMEDALVINKSSYERGFAYATIYKSEKVDLGQKRKKGEQIIYHFGFGNDKLHPKWLEKL 818
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDL--QKV 703
D+DGLP +G + +P + +N +T T + G+E V+V+ V + + D+ Q +
Sbjct: 819 DADGLPMIGVKLEEGDPLAAYFNETTGKTIIQEYHGTEDVFVEEVRLLGNDSGDMECQCI 878
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
+I+ R R IGDKFSSRHGQKGVCSQ WP DMPF +G++PD+IINPHAFPSRMTI
Sbjct: 879 HIKLRIARPITIGDKFSSRHGQKGVCSQKWPAADMPF-SESGIQPDIIINPHAFPSRMTI 937
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
M +ES+A K G+LHG ++TPF ++N + D G+ L + G+ Y+G E
Sbjct: 938 GMFIESMAGKAGALHGLIEDSTPF--IFNEENTAA-------DYFGKQLIKAGYAYNGSE 988
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
YSG+ G + EIF+G VYYQRLRHMVSDKFQVR+TG V +T QP F
Sbjct: 989 TFYSGITGDIMEVEIFVGIVYYQRLRHMVSDKFQVRTTGPVHSLTHQPVKGRKRAGGIRF 1048
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERDS++AHG AY+L DRL CSDY + +C +CGS+L S I IG
Sbjct: 1049 GEMERDSIIAHGTAYILQDRLMNCSDYTQSWICKICGSIL--SLISSIT----TIG--TG 1100
Query: 944 RKAPKKVICHAC--------------QTSKG--------METVAMPYVFRYLAAEFAAMN 981
V C+ C Q S G + +A+PYVF+YLA E A+MN
Sbjct: 1101 NTFNSNVRCYLCALEATGFENDSDIWQDSTGRKFKGGDNIAVIALPYVFKYLATELASMN 1160
Query: 982 IKMTLKLN 989
+K+ L L+
Sbjct: 1161 VKLKLNLH 1168
>H0VU26_CAVPO (tr|H0VU26) DNA-directed RNA polymerase OS=Cavia porcellus GN=POLR1B
PE=3 SV=1
Length = 1135
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/999 (44%), Positives = 591/999 (59%), Gaps = 66/999 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V I CVR D S++ + L+YL N + L F + + LP+G
Sbjct: 191 IALVRPKWKSRGPGYTQFGVSIHCVRGDHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L K + + V R+++EE T+ Q
Sbjct: 251 FALKALVSFSDYQIFQELIK------GKEEDSFFRNSVSQMLRIVMEEGGS----TQKQV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L+ S + A+ + + +HL N +KF+LL FM +KLF+L G
Sbjct: 301 LNYLGECFRIKLSLPDWYSNEQAAEFLFNQCICIHLKSNTEKFHLLCFMTRKLFALAKGE 360
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ +NPDSL NQE+L PG L ++LKEK+E WL S K + +++ + S + K F
Sbjct: 361 CLEENPDSLVNQEILTPGQLFLMFLKEKMEAWLVSVKIALDKRAQKTNVSINTENLMKIF 420
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRG F
Sbjct: 421 SM--GGDLTRPFEYLLATGNLRSKTGLGFMQDSGLCVVADKLNFIRYLSHFRCVHRGGDF 478
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVR+LLPESWGFLCPV+TPDG PCGL+NH+T C + + F
Sbjct: 479 AKMRTTTVRRLLPESWGFLCPVNTPDGAPCGLMNHLTAICEVVTQF----------AYTT 528
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
SI +L G+T P P P E VLLDG +VG + + +R KV
Sbjct: 529 SIPALLCSLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGVADSLRRFKVLR 585
Query: 418 SAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP +EV +P++ + YPGL+LFT+P R VRPV+N+ + E LIG EQ+
Sbjct: 586 EKRIPPWMEVALIPITGKPSLYPGLFLFTTPCRLVRPVQNLELGREE-----LIGTMEQL 640
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FM I + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM+KQTM
Sbjct: 641 FMNIAILED----EVCAGITTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMSKQTM 696
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDMEDA
Sbjct: 697 GFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDA 756
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVG 654
MI+NK+S ERG HG +Y+TE ++L+E+ + D S K + KLD DGLP +G
Sbjct: 757 MIVNKASWERGFAHGSVYKTEFINLSEKIKQGDDSLVFGVKPGDPRVMQKLDDDGLPFIG 816
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRN 712
++ +PY N +T ++ + K E VD + V + + + I R PRN
Sbjct: 817 AKLQYGDPYYGYLNLNTGESYVMYYKSKENCIVDNIKVCSNESGSGKFKCICITMRVPRN 876
Query: 713 PVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAA 772
P IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A
Sbjct: 877 PTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMMPDILFNPHGFPSRMTIGMLIESMAG 935
Query: 773 KGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
K +LHG +ATPF S ++N SE G+ML+ G+N++G E LYSG+ G
Sbjct: 936 KSAALHGLCHDATPFIFS--EENSASEY-------FGEMLKAAGYNFYGTERLYSGISGV 986
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LL
Sbjct: 987 ELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALL 1046
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KK 949
AHG ++LLHDRL CSD +A VC CGS+L+ +P PP + +K
Sbjct: 1047 AHGTSFLLHDRLFNCSDRSVAHVCVECGSLLSPLLEKP-----------PPSWSAMRNRK 1095
Query: 950 VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1096 YNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>Q5B697_EMENI (tr|Q5B697) DNA-directed RNA polymerase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN3933.2 PE=3 SV=1
Length = 1231
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1063 (41%), Positives = 615/1063 (57%), Gaps = 120/1063 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VRN+F+ R Y+ + IR VR DQ+S T L+YL + + F + EY++PV
Sbjct: 216 MAIVRNTFTNRGHAYSKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYIIPVV 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + + + V DR +++ + L +R +C
Sbjct: 276 MILKALVETNDREIFEGIVGSASSE------GINNTFVTDRVELLLRTYKAYKLHSRSEC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
+IGE F+P+L + + L+ V HL + ++DKF +L+FM++KL
Sbjct: 330 RAFIGEKFKPVLGVPADTPNEEAGTEFLRKVVLPHLGNQNVTETQDYDKFKMLMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+L++W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMLLKERLDEWVRSFGPILRDWSNRNHGA-RF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPAFERDFVSKVIRRSNENIGGAMEYFLSTGNLVSPTGLDLQQTSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C + +
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLVAT--- 565
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
S + K+ + L + +S ++ E +TV LDG I+G + I
Sbjct: 566 SDTDVSHLPKLLVQ-LGVRNESSVSL----------DESVTVQLDGRIIGYCSPKQARVI 614
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
+ +R KVS + +P LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 615 ASTLRHWKVSGTNNVPLGLEIGYVPNSNGGQYPGIYMFSQAARMYRPVKYLPL-----DK 669
Query: 467 IDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD+NQSPRN
Sbjct: 670 LDYVGPFEQPFMEIACLPSDLVKGL-----STHIEFTPTNILSIVANMTPFSDYNQSPRN 724
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM+KQTM I +R D KLY LQT QTPIVR Y Y +D +P GTNA+VA+
Sbjct: 725 MYQCQMSKQTMGTPGTAIDYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVAI 784
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK-------S 638
++YTGYDM+DAMI+NKSS ERG +G +Y+T+ L E+ SR S + +K S
Sbjct: 785 ISYTGYDMDDAMIINKSSHERGFGYGTVYKTKVHSLDEKDSRRTKSKQAVQKLFGFAPGS 844
Query: 639 NIE---KSKLDSDGLPHVGQMIRPDE---PYCSI-YNASTSS-------THTLKKKGSEP 684
I ++ LD DG PH+G I+ Y ++ Y+A++ S TH +K K SE
Sbjct: 845 EIRAEWRATLDEDGFPHIGAEIKEGSIVAAYHTVRYDATSDSYINVDGITHFVKYKDSER 904
Query: 685 VYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
Y+D + + + Q +++++R PR P+IGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 905 AYIDSIRIMGSETGTEPAQAISVKYRIPRKPIIGDKFSSRHGQKGVCSQLWPAVDMPFS- 963
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG + TPF+ S +
Sbjct: 964 ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDCTPFQFS---------EEY 1014
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
D G+ LR G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+TG
Sbjct: 1015 TATDYFGEQLRRAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTTG 1074
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V+ +T QP GEMERDSL+AHGAAY+L DRL CSD A +C CGS
Sbjct: 1075 PVNNLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAYILQDRLMNCSDSQRAWICRDCGSF 1134
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKK-------------VICHACQTSK---------- 959
L+T ++ G R A K V C C
Sbjct: 1135 LST------QVAVSSAGSSKARMAAKNSSGSAALGGNAGIVRCRRCAREAVFDDSRAVVW 1188
Query: 960 ------------GMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V RYL E AAM I+M +++N
Sbjct: 1189 EDGEGRRFVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFRVDN 1231
>L8IVA2_BOSMU (tr|L8IVA2) DNA-directed RNA polymerase OS=Bos grunniens mutus
GN=M91_19267 PE=3 SV=1
Length = 1135
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1008 (44%), Positives = 589/1008 (58%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMVRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFFRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L+ + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGERFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-------E 231
G + +NPDSL NQEVL PG L ++LKEKLE WL S K + +KS + S +
Sbjct: 359 GECMEENPDSLMNQEVLTPGQLFLMFLKEKLEAWLVSIKIAIDKKSQKTNVSLNNENLMK 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF + ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR
Sbjct: 419 IFSL--------GIDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQSVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L + G+T P P P E VLLDG ++G I
Sbjct: 531 PA----------LLCNLGVT---PVDGTPHRPYSECYPVLLDGVMIGWADKEIAPGIADS 577
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGLYLFT+P R VRPV+N+ + E
Sbjct: 578 LRHFKVLREKRIPPWMEVALIPMTGKPSLYPGLYLFTTPCRLVRPVQNLELGKEE----- 632
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQ
Sbjct: 633 LIGTMEQIFMNVAIFED----EVLAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQ 688
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++Y
Sbjct: 689 CQMGKQTMGFPLLTFQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISY 748
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLD 646
TGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD
Sbjct: 749 TGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSERIKQGDDSLVFGVKPGDPRVLQKLD 808
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G ++ +PY S N +T + K E VD + V D N K + V
Sbjct: 809 DDGLPFIGAQLKYGDPYYSYLNLNTGEGFVMYYKSKENCIVDNIKVCSNDTGNGK-FKCV 867
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 868 CITMRVPRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTI 926
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+NY+G E
Sbjct: 927 GMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNYYGTE 977
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 978 RLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRF 1037
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 1038 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PP 1086
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++T+++PYVFRY AE AAMNIK+ L +
Sbjct: 1087 SWSALRNRKYNCALCNRSDTIDTISLPYVFRYFVAELAAMNIKVKLDI 1134
>D2HUR1_AILME (tr|D2HUR1) DNA-directed RNA polymerase (Fragment) OS=Ailuropoda
melanoleuca GN=POLR1B PE=3 SV=1
Length = 1135
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1007 (44%), Positives = 590/1007 (58%), Gaps = 82/1007 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 VAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L K + + V R+++EE T+ Q
Sbjct: 251 FALKALVSFSDYQIFQELIK------GKEEDSFFRNSVSQMLRIVMEE----GCSTQKQV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L+ + A+ + + +HL N +KF +L M +KLF+L G
Sbjct: 301 LNYLGECFRVKLSLPDWYPNEQAAEFLFDQCICIHLKSNTEKFYMLCLMTRKLFALAKGE 360
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSEIF 233
+ DNPDSL NQEVL PG L ++LKEK+E WL S K + ++S T + +IF
Sbjct: 361 CMEDNPDSLVNQEVLTPGQLFLMFLKEKMESWLVSIKIALDKRSQKTNVSINTENLMKIF 420
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR V
Sbjct: 421 SL--------GTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCV 472
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F S+
Sbjct: 473 HRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASVPA 532
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIR 411
+L G+T P P P E VLLDG +VG + I +R
Sbjct: 533 ----------LLCSLGVT---PVDGAPHRPYAECYPVLLDGVMVGWVDKELAPSIADSLR 579
Query: 412 ELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E LI
Sbjct: 580 HFKVLREKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LI 634
Query: 471 GPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
G EQ+FM I D G TH+E+ P +LSV+AN P+SDHNQSPRNMYQC
Sbjct: 635 GTMEQIFMNIAIFEDEVLAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQC 689
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QM KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YT
Sbjct: 690 QMGKQTMGFPLLTYQARSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYT 749
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDS 647
GYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD
Sbjct: 750 GYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRILQKLDD 809
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVN 704
DGLP +G ++ +PY S N +T + + K E VD + V D + K + +
Sbjct: 810 DGLPFIGAQLQYGDPYYSYLNLNTGESFVMYYKSKENCIVDNIKVCSNDTGSGK-FKCIC 868
Query: 705 IRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIA 764
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 869 ITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIG 927
Query: 765 MLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEV 824
ML+ES+A K +LHG +ATPF S E S L+ G++L+ G+N++G E
Sbjct: 928 MLIESMAGKSAALHGLCHDATPFTFS-------EENSA--LEYFGELLKAAGYNFYGTER 978
Query: 825 LYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFG 884
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FG
Sbjct: 979 LYSGISGIELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFG 1038
Query: 885 EMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPR 944
EMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 1039 EMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPS 1087
Query: 945 KAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1088 WSAMRNRKYNCTLCDRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>E9CI32_CAPO3 (tr|E9CI32) DNA-directed RNA polymerase OS=Capsaspora owczarzaki
(strain ATCC 30864) GN=CAOG_07802 PE=3 SV=1
Length = 1126
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/1010 (42%), Positives = 606/1010 (60%), Gaps = 83/1010 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF +R YT +IRC R DQ+S T+ +++L++ + + F + EYL+P
Sbjct: 177 MALDRPSFRKRGPEYTTFGTMIRCTRLDQTSQTITVHFLQDGNCMVRFSYRKNEYLVPAV 236
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQLSLFT 116
++LKAL+ T+D EI +E+ VG+ ++D DR +++ + +
Sbjct: 237 LILKALVTTTDQEI-----------FER---IVGSSKLDSFLTDRVELMLRSATDMHVHN 282
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
Q ++GE F+ L ++ S + V + +L+ + +HLD++ DKF+LL+FM+QKL+ +
Sbjct: 283 SKQARVFLGERFRIALDVPEDMSDEDVGRLLLRKLMLIHLDNDQDKFDLLVFMIQKLYKV 342
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFS-- 230
V G +N DS N E+L G L ++LKEK+E++L + K +++R FS
Sbjct: 343 VSGDCCTENADSPMNHEILTSGQLYLMFLKEKMEEYLTACKAVVAQDLRRNPEQVSFSAG 402
Query: 231 -EIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ F K K P I +E ++ TG L + TGLDLQQ +G+TV AD+LN+LR+LSH
Sbjct: 403 SQYFT--KSLSKNPV-DIGRRLEYLMATGNLASATGLDLQQVSGFTVVADKLNFLRYLSH 459
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR +HRGA FA ++TTTVRKLLPE+WGF+CPVHTPDG PCGLLNH+ C +
Sbjct: 460 FRCIHRGAFFAEMKTTTVRKLLPEAWGFVCPVHTPDGAPCGLLNHLAAKCLVVD------ 513
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ D ++ +L++ GM + K+ P + L VLLDG I+G + +I AH
Sbjct: 514 EVADASRVPA----MLIELGMAPIDHKIHYPS--DYLNVLLDGRIIGKLAPENAAQITAH 567
Query: 410 IRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDL 469
R K +P +E V S G +PGL++FTS R VRPV+N+ ++N ++
Sbjct: 568 FRYRKAQGHKDLPRYMESALVLPSERGQFPGLFIFTSLCRMVRPVQNL--IAN---TVEY 622
Query: 470 IGPFEQVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
IG FEQV+M+I + P TH E+ PT MLSV A TP+SDHNQSPRNMY
Sbjct: 623 IGSFEQVYMDIAVLEA------DIVPGVTTHHELSPTAMLSVNALMTPYSDHNQSPRNMY 676
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + +QHR+D KLY + PQ +VR Y Y D YP+GTNA++A ++
Sbjct: 677 QCQMGKQTMGTPAHALQHRSDNKLYRVMNPQASLVRPQGYEDYKCDNYPSGTNAVIAFVS 736
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLT--EQGSRSDPSSRMF-----RKSNI 640
YTGYDMEDAMI+NK S +RG + IY+T+ VDL + G+R + ++ + +
Sbjct: 737 YTGYDMEDAMIINKGSYDRGFGYATIYKTQIVDLAKLKPGNRENSKPTLYFGTVRNQREV 796
Query: 641 EKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD- 699
+ ++++DG P + +++ P CS + +T+ +K K SE Y+ + + D
Sbjct: 797 TEKQVEADGFPPLETVLKNGAPICSYVDETTNMAQVVKYKSSEEGYLHEIKLIAGEGSDQ 856
Query: 700 -LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
Q+ IRFR RNPVIGDKF+SRHGQKGVCSQLWP MPFC +GM PD++ NPH FP
Sbjct: 857 RAQRAIIRFRLRRNPVIGDKFASRHGQKGVCSQLWPSEGMPFC-ESGMVPDILFNPHGFP 915
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI M +E++A K +LHG +A+PF +EKS +D G+ L + G+N
Sbjct: 916 SRMTIGMWIETMAGKSAALHGVVHDASPFVF--------NEKSR-AVDYFGEQLAKAGYN 966
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
Y+G E +YSGV GKE EIF+G VYYQRLRHMV DK+QVR+TG V +T QP
Sbjct: 967 YYGSERMYSGVTGKEFDAEIFMGVVYYQRLRHMVLDKYQVRTTGPVHNLTHQPIKGRKRA 1026
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
FGEMERDSLLAHG A+LLHDRL CSDY + VC CGS+L+ Q ++
Sbjct: 1027 GGIRFGEMERDSLLAHGTAFLLHDRLMNCSDYSYSYVCKACGSILSPMLEQATQI----- 1081
Query: 939 GGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ V C +CQ+SK +E +A+PYVFRYL +E AMNI++TL +
Sbjct: 1082 ------SGKRNVKCRSCQSSKNVEIIAVPYVFRYLLSELLAMNIRVTLDV 1125
>I2JVC9_DEKBR (tr|I2JVC9) DNA-directed RNA polymerase OS=Dekkera bruxellensis
AWRI1499 GN=AWRI1499_3186 PE=3 SV=1
Length = 1168
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1016 (43%), Positives = 606/1016 (59%), Gaps = 81/1016 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR+SFS R Y+ V IRCVR DQ++LT L+YL + + F + EYL+PV
Sbjct: 195 MAIVRSSFSNRGASYSSYGVQIRCVRPDQTALTNVLHYLNDGNVTFRFSWRKNEYLVPVV 254
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++L+ALI+++D EI + V + DR +++ + L ++ +
Sbjct: 255 MILRALIESNDREIFDGIVGS----------DVENSFLTDRLELLLRTYKHYKLNSKKEA 304
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L YIG F+ + + + V + VL+ V VHL DN DKF +L+FM++KL++LV G
Sbjct: 305 LAYIGNKFRVVFAATPDRTDVDVGEEVLRRIVLVHLSDNRDKFRMLLFMVRKLYALVAGD 364
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKK 237
+NPDS QN E+LL G L + +KEK++++LQS + +++ + +F + + +
Sbjct: 365 CTPENPDSTQNHEILLGGFLYGMIIKEKIDEYLQSIRTQIQVDINRGVAVNFKDPRYMHR 424
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
+ I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RFL+HFR VHRGA
Sbjct: 425 VLMRV-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFLAHFRMVHRGA 483
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITS-YFDSQGSIKDYFK 356
FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C++T+ D+ + +K
Sbjct: 484 FFASLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAYKCQVTTEQLDTSAIPEAVYK 543
Query: 357 IKIS-ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+ +S L SG P V V LDG I+G + + + +R KV
Sbjct: 544 LGVSPTLSAAAISG-------------PNVCCVQLDGRIIGWCSHKQGKYVADTLRFWKV 590
Query: 416 SSSAM-IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
SS IP +LE+GYVP S G YPGLYLF SR +RPV+ + + NK D++GPFE
Sbjct: 591 ESSEHGIPLELEIGYVPESQNGQYPGLYLFGGRSRMIRPVKYLPL----NKK-DIVGPFE 645
Query: 475 QVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
QV+M I + TH E PT +LS +AN TP+SD NQSPRNMYQCQM KQ
Sbjct: 646 QVYMNIAV----EPNEIEKNVHTHVEFSPTYILSTLANLTPFSDFNQSPRNMYQCQMGKQ 701
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM + HR+D KLY LQ ++PIV+ Y + +D +P GTNA+VAV+AYTGYDM+
Sbjct: 702 TMGTPGVALCHRSDNKLYRLQCGESPIVKAGLYDDFGMDNFPNGTNAVVAVIAYTGYDMD 761
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF-----RKSNIEKSKLDSDG 649
DAMILNKS+ ERG +G +Y+TE +DL R DP ++ F + +LD DG
Sbjct: 762 DAMILNKSTEERGFAYGSMYKTEKIDLGMDRRRGDPITQHFGFGEDHWPEEWRERLDEDG 821
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRF 707
+P++G I+ +P C+ Y+ T KGSE ++D V + D K+ Q I+F
Sbjct: 822 MPYIGSFIKEGDPICAFYDDVLGRTRIKHFKGSESGFIDEVKLLGDDNAAKECQIATIKF 881
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI ML+
Sbjct: 882 RMRRGPIIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDIIINPHAFPSRMTIGMLI 940
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K G+LHG ++TP++ S ++ L G L+ G+NY+G E +YS
Sbjct: 941 ESMAGKAGALHGIAQDSTPWQFS---------ENDTPLKYFGDQLKSAGYNYYGNEPMYS 991
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
GV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEME
Sbjct: 992 GVTGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGGIRIGEME 1051
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG---GLPPR 944
RD+L+ HG+A+LL DRL CSDY VC CGS+L+T ++ IG G+ R
Sbjct: 1052 RDALIGHGSAFLLQDRLLNCSDYTQCSVCKECGSILST------QMSVSRIGTAAGIRCR 1105
Query: 945 KAPKKV-----------ICHACQTSK-----GMETVAMPYVFRYLAAEFAAMNIKM 984
+ KKV + Q +K TV +P+V +YL +E AM I+M
Sbjct: 1106 RCAKKVDSTTVSKDDLDVWEDGQGNKYVGGENTTTVGIPFVLKYLDSELNAMGIRM 1161
>F6Y6Q9_CALJA (tr|F6Y6Q9) DNA-directed RNA polymerase OS=Callithrix jacchus
GN=POLR1B PE=3 SV=1
Length = 1079
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1002 (44%), Positives = 592/1002 (59%), Gaps = 72/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CV+ + S++ + L+YL N + L F + + LP+G
Sbjct: 135 IAMIRPKWKTRGPGYTQYGVSMHCVKEEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 194
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R+++EE T+
Sbjct: 195 FALKALVSFSDYQIFQELI--------KGKEDDSFFRNSVSQMLRIVMEE----GCSTQK 242
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 243 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 302
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ + S + K
Sbjct: 303 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIVFDKKAQKTNLSMNTDNLMK 362
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F T ++ E +L TG L + TGL L Q +G V AD+LN++R+LSHFR VHRG+
Sbjct: 363 IF--TMGLDLTKPFEYLLATGNLRSKTGLGLLQASGLCVVADKLNFIRYLSHFRCVHRGS 420
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 421 DFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPA---- 476
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+L + G+T P P P E VLLDG +VG + I +R KV
Sbjct: 477 ------LLCNLGVT---PVDGAPHQPYSECYPVLLDGVMVGWVDKELALGIADSLRHFKV 527
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV +P++ YPGL+LFT+P R +RPV+N+ + E LIG E
Sbjct: 528 LREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLIRPVQNLELGKEE-----LIGTME 582
Query: 475 QVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
Q+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQ
Sbjct: 583 QIFMNVAIYED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQ 638
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++YTGYDME
Sbjct: 639 TMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDME 698
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPH 652
DAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD DGLP
Sbjct: 699 DAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPF 758
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRH 709
+G ++ +PY S N +T + + K E VD + V D + K + V I R
Sbjct: 759 IGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCVCITMRV 817
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES
Sbjct: 818 PRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIES 876
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG+
Sbjct: 877 MAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGI 927
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD
Sbjct: 928 SGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERD 987
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP-- 947
+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 988 ALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMR 1036
Query: 948 -KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1037 NRKYNCTLCHRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1078
>B9WJL4_CANDC (tr|B9WJL4) DNA-directed RNA polymerase OS=Candida dubliniensis
(strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=CD36_70090 PE=3 SV=1
Length = 1166
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1023 (43%), Positives = 604/1023 (59%), Gaps = 98/1023 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 196 MAIIRPSFGNRGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVV 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI + E + DR +++ + +L+++ +
Sbjct: 256 MILKALIETNDREIFDGIVGNDTE----------NSFLTDRLELLLRTYKTYNLYSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNTDKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ R G +F + +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDINRGVG-INFDDRKYMT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCKIATEASDVSQ------ 537
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
V +TQL +P P + V LDG IVG + + +R K
Sbjct: 538 ---------VPKALTQLGVLPADSFAAGPNLCCVQLDGRIVGWTTHEQGRIVADTLRYWK 588
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V+ +P DLE+GYVP S G YPGLY+F SR +RPVR + L E D++GPFE
Sbjct: 589 VNGGHGLPLDLEIGYVPPSNKGQYPGLYIFGGRSRMMRPVRYLP-LDKE----DIVGPFE 643
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 644 QVYMNVAVTPEEIENNIHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMGK 698
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM
Sbjct: 699 QTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDM 758
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+TE VDL++ R DP ++ F E K KLD+D
Sbjct: 759 DDAMIINKSADERGFGYGTVYKTEKVDLSQSRRRGDPITQHFGFGTDEWPEAWKEKLDAD 818
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + Y+ + T SEP Y++ V + D N+++ Q++ I+
Sbjct: 819 GLPLIGVKVEEGDPIVAYYDDTLGKTKVKTYHSSEPGYIEEVKLLGDDSNEQEGQQITIK 878
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M
Sbjct: 879 YRITRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMF 937
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP+ K N + + D G+ L + G+NYHG E +Y
Sbjct: 938 VESLAGKAGALHGIAQDSTPW-----KFNEQDTPA----DYFGEQLLKAGYNYHGNEPMY 988
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 989 SGATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1048
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD+L+ HG ++LL DRL CSDY VC CGS+L T +PR IG +
Sbjct: 1049 ERDALIGHGTSFLLQDRLLNCSDYTQTPVCRSCGSILTTQ----TSVPR--IGSM----- 1097
Query: 947 PKKVICHACQTS-------------------------KGMETVAMPYVFRYLAAEFAAMN 981
+ C C S TVA+P+V +YL +E +AM
Sbjct: 1098 -ASIRCRRCAVSLDKYEGYAADSDIWEDGHGKKFVGGDDTTTVAIPFVLKYLDSELSAMG 1156
Query: 982 IKM 984
IKM
Sbjct: 1157 IKM 1159
>G3NF51_GASAC (tr|G3NF51) DNA-directed RNA polymerase OS=Gasterosteus aculeatus
GN=POLR1B PE=3 SV=1
Length = 1136
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1004 (44%), Positives = 602/1004 (59%), Gaps = 83/1004 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + + CV+ + +++ + L+YL N + L F + + LP+G LK
Sbjct: 195 RPKWKTRGQGYTQYGISMHCVKEEHTAINMNLHYLENGTVMLNFIYQKELFFLPLGFALK 254
Query: 65 ALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
AL+D +D +I L K + + K + + R+++EE TR + LNY
Sbjct: 255 ALVDFTDFQIYQELIKGREDNSFYKSCAS-------EMLRVVMEE----GCITRSKVLNY 303
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+GE F+ L + + + AK ++++ V +HL + +KF LL + +KLF+ +
Sbjct: 304 LGERFRVKLNLPEWYTNEQCAKFLIEECVCIHLKSDTEKFYLLCMITRKLFTYAKQECME 363
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM----KRKSGTFDFSEIFVVKK-- 237
+N DS+ QEVL PG +++KE+L WL S K KR G+ + FV+K
Sbjct: 364 ENLDSITFQEVLTPGKFYLMFMKERLAAWLSSVKLSFEKRGKRLKGSINHE--FVMKMFN 421
Query: 238 -CFDKTPARAISTSIENMLKTGRLV--TNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
C D IS S E +L TG LV T+TGL + Q G+ V AD+LN++R+LSHFR VH
Sbjct: 422 MCTD------ISKSFEYLLATGNLVSKTDTGLGIMQNTGFCVLADKLNFIRYLSHFRCVH 475
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA+FA +RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I + S+
Sbjct: 476 RGAAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVT-----ASMA-- 528
Query: 355 FKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
++ +L G+T P PG E V+L+G +VG + + +V +R
Sbjct: 529 ---TTTLTALLCSLGVT---PVDGTPGQAFSECYPVVLNGEVVGWVETELAHGVVDSLRR 582
Query: 413 LKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
KV IP E+ VP + + YPGLYLFT+P R VRPVRN+++ E LIG
Sbjct: 583 FKVLREKRIPPWTEIVLVPKTGKASLYPGLYLFTTPCRMVRPVRNLALGKQE-----LIG 637
Query: 472 PFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
FEQ+++ + G TH+E+ P MLSVVA+ P+SDHNQSPRNMYQCQM
Sbjct: 638 TFEQLYVNV----GIAEDEIEPGVTTHQELFPHSMLSVVASFIPYSDHNQSPRNMYQCQM 693
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
+KQTM F + + R+D KLY LQTPQ+P+VR TY YN+D YP+GTNAIVAV++YTGY
Sbjct: 694 SKQTMGFPLHSFKERSDNKLYRLQTPQSPLVRPYTYDHYNLDNYPSGTNAIVAVISYTGY 753
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDG 649
DMEDAMI+NKSS ERG HG IY+TE VDL ++ R D S K +LD DG
Sbjct: 754 DMEDAMIVNKSSWERGFAHGSIYKTELVDLADK-VRGDDSVVFGTTPGDPKVNGQLDDDG 812
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNK--KDLQKVNIRF 707
LPH+G ++ +P+ S N +T + K E VD V V + ++V I
Sbjct: 813 LPHIGTTLKYGDPFYSYINLNTGQSFVTYYKNQEACVVDNVKVCSSDNGLGRFKRVCITM 872
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+
Sbjct: 873 RVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMSPDILFNPHGFPSRMTIGMLI 931
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K G+LHG +ATPF S E ++ L+ G+MLR G+NY+G E LYS
Sbjct: 932 ESMAGKSGALHGLSHDATPFTFS------EENRA---LEYFGKMLRAGGYNYYGTERLYS 982
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
GV G+EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEME
Sbjct: 983 GVSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVQGGIRFGEME 1042
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+LLAHG+++LLHDRL CSD + VC CGS+L+ +P PP +
Sbjct: 1043 RDALLAHGSSFLLHDRLFNCSDRSVTQVCVDCGSLLSPLLEKP-----------PPYWSA 1091
Query: 948 ---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K +C C S +++V++PYVFRY AE AAMNIK+ L +
Sbjct: 1092 MRHRKTVCVLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLDI 1135
>M5EP99_MALSM (tr|M5EP99) Genomic scaffold, msy_sf_10 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_2236 PE=4 SV=1
Length = 1240
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1041 (42%), Positives = 620/1041 (59%), Gaps = 98/1041 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCV-RADQSSLTVKLYYLRNDSARLGFWVKGREYLLPV 59
M+ R+SF++R Y++KAV IRCV R D S+T ++YL N A L F + +EY++P+
Sbjct: 243 MAIERSSFTRRGPSYSNKAVSIRCVGRHDLISVTNSVHYLENGGATLRFSWRKQEYMVPI 302
Query: 60 GIVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL+ +D EI T++ + + DR +++ + +L+T Q
Sbjct: 303 VMVLKALVSATDKEIFTSIVQTDTDN----------TFLTDRVELLLRGFHRYALWTGEQ 352
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
CL Y+G+ F+ ++ ++ S V + ++ V HL+ DK+ +L+FML+KL++ V G
Sbjct: 353 CLEYLGDKFRVVMRAPEDWSNAQVGEDLINRLVLTHLEMPRDKYRMLVFMLRKLYAFVAG 412
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKR--KSGT--FDFSEIFVV 235
DNPDS Q+Q+VL+PG L ++E+L+++L + + ++ R ++G DF + +
Sbjct: 413 ECCADNPDSPQHQDVLMPGFLYGAIIQERLDEYLINVRAQLARDVRAGAPGCDFFDRRYI 472
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
++ K + + + + L TG L + +GLDLQQ G+T+ A++LN+ RFLSHFR+VHR
Sbjct: 473 QRTLGKVNS-DVGARLSSFLATGNLSSPSGLDLQQVGGFTIVAEKLNFYRFLSHFRSVHR 531
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH C++T+ +D
Sbjct: 532 GAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHACQLTT--------RDLD 583
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
++ L L GMT++V + P +TV L+G ++G + +R K
Sbjct: 584 VSQVPAL--LASLGMTEVVAAHV--SPRTHVTVQLNGTLLGYATPALARHMATVLRVWKT 639
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+P DLEVG+VP S+GG YPGLYLF +R VRPV + N D +GPFEQ
Sbjct: 640 EGRHGVPLDLEVGFVPTSLGGQYPGLYLFGGRARMVRPVTYLF-----NGREDHVGPFEQ 694
Query: 476 VFMEIRCPDGGDGGRKSSFPA---THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
V+++I C R+ A TH E+ PT +LSVVAN TP+SD NQSPRNMYQCQM
Sbjct: 695 VYLDIAC-------RRPEIEAGVSTHVEVSPTHVLSVVANLTPFSDFNQSPRNMYQCQMG 747
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM S I R D KLY LQ+ QTP+VR + + +Y +D++P GTNAIVAV++YTGYD
Sbjct: 748 KQTMGTPSGAISRRTDNKLYRLQSGQTPVVRPALHHRYAMDDFPNGTNAIVAVISYTGYD 807
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRKSNIEKSKL 645
MEDAMILNKS+ ERG +G +Y++E V L + G + R + +++L
Sbjct: 808 MEDAMILNKSAHERGFGYGTVYKSEVVHLRDAGGGRGGGQALLLGWGPDIRADDPRRAQL 867
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKV 703
D DGLP VG + P C+ YN ++ T + KG E YVD V V + D Q+V
Sbjct: 868 DVDGLPRVGTPMTKGTPLCAYYNEASGRTRLQRYKGDEAAYVDTVRVIGTDTGDGPCQRV 927
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I FR PR PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFPSRMTI
Sbjct: 928 QITFRVPRAPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHAFPSRMTI 986
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K G++HG +ATP+ + +D+ E G+ LR G+NY G E
Sbjct: 987 GMLIESMAGKAGAMHGLAQDATPW--TFGEDDTPVEY-------FGEQLRAAGYNYLGNE 1037
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
+YSG+ G+EL +I++G V+YQRLRHMV+DKFQVR+TG V +TRQP F
Sbjct: 1038 PMYSGITGQELRADIYLGVVFYQRLRHMVNDKFQVRTTGPVHALTRQPVKGRKRAGGIRF 1097
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LL DRL CSD A VC CGS+L+ ++ + +G +
Sbjct: 1098 GEMERDALLAHGTSFLLQDRLFHCSDATTAYVCRTCGSLLSVAYDDAAGISVPGLGTVQA 1157
Query: 944 ------RKA---PKKVICHAC---------------------------QTSKGMETVAMP 967
R A P+ C C + + ++ VA+P
Sbjct: 1158 IEKSAHRTAPLGPRGEYCRVCRRAAEAGAPPPAAAPEHRVPVPRHCVVRRTGDLDVVAVP 1217
Query: 968 YVFRYLAAEFAAMNIKMTLKL 988
YV +YL AE AAM ++M+ +
Sbjct: 1218 YVLKYLVAELAAMGLRMSFAV 1238
>Q5AFK6_CANAL (tr|Q5AFK6) DNA-directed RNA polymerase OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RPA135 PE=3 SV=1
Length = 1166
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/1011 (43%), Positives = 604/1011 (59%), Gaps = 74/1011 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 196 MAIIRPSFGNRGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVV 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI + E + DR +++ + +L+++ +
Sbjct: 256 MILKALIETNDREIFDGIVGNDTE----------NSFLTDRLELLLRTYKTYNLYSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNADKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ R G +F + +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDINRGVG-INFDDRKYMT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCKIATEASDVSQ------ 537
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
V +TQL +P P + V LDG IVG + + +R K
Sbjct: 538 ---------VPKALTQLGVLPADSFAAGPNLCCVQLDGKIVGWTTHEQGRIVADTLRYWK 588
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V+ +P DLE+GYVP S G YPGLY+F SR +RPV+ + L E D++GPFE
Sbjct: 589 VNGGHGLPLDLEIGYVPPSNKGQYPGLYIFGGHSRMMRPVKYLP-LDKE----DIVGPFE 643
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 644 QVYMNVAVTPEEIENNIHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMGK 698
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM
Sbjct: 699 QTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDM 758
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+TE VDL++ R DP ++ F + E K KLD+D
Sbjct: 759 DDAMIINKSADERGFGYGTVYKTEKVDLSQSRRRGDPITQHFGFGSDEWPEAWKEKLDAD 818
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + Y+ + T SEP Y++ V + D N+++ Q++ I+
Sbjct: 819 GLPLIGVKVEEGDPIVAYYDDTLGKTKVKTYHSSEPAYIEEVKLLGDDSNEQEGQQITIK 878
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M
Sbjct: 879 YRITRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMF 937
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP++ + + D G+ L + G+NYHG E +Y
Sbjct: 938 VESLAGKAGALHGIAQDSTPWKFNEQDTPA---------DYFGEQLLKAGYNYHGNEPMY 988
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 989 SGATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1048
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLP------RREIGG 940
ERD+L+ HG ++LL DRL CSDY VC CGS+L T P+ RR G
Sbjct: 1049 ERDALIGHGTSFLLQDRLLNCSDYTQTPVCRSCGSILTTQTSVPRIGSMASIRCRRCAVG 1108
Query: 941 LPPRK--APKKVICHACQTSK-----GMETVAMPYVFRYLAAEFAAMNIKM 984
L + A I K TVA+P+V +YL +E +AM IKM
Sbjct: 1109 LDKYEGYAADSDIWEDGHGKKFVGGDDTTTVAIPFVLKYLDSELSAMGIKM 1159
>G1UA20_CANAX (tr|G1UA20) DNA-directed RNA polymerase OS=Candida albicans
GN=CaJ7.0071 PE=3 SV=1
Length = 1166
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/1011 (43%), Positives = 604/1011 (59%), Gaps = 74/1011 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 196 MAIIRPSFGNRGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVV 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI + E + DR +++ + +L+++ +
Sbjct: 256 MILKALIETNDREIFDGIVGNDTE----------NSFLTDRLELLLRTYKTYNLYSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNADKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ R G +F + +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDINRGVG-INFDDRKYMT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCKIATEASDVSQ------ 537
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
V +TQL +P P + V LDG IVG + + +R K
Sbjct: 538 ---------VPKALTQLGVLPADSFAAGPNLCCVQLDGKIVGWTTHEQGRIVADTLRYWK 588
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V+ +P DLE+GYVP S G YPGLY+F SR +RPV+ + L E D++GPFE
Sbjct: 589 VNGGHGLPLDLEIGYVPPSNKGQYPGLYIFGGHSRMMRPVKYLP-LDKE----DIVGPFE 643
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 644 QVYMNVAVTPEEIENNIHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMGK 698
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM
Sbjct: 699 QTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDM 758
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+TE VDL++ R DP ++ F + E K KLD+D
Sbjct: 759 DDAMIINKSADERGFGYGTVYKTEKVDLSQSRRRGDPITQHFGFGSDEWPEAWKEKLDAD 818
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + Y+ + T SEP Y++ V + D N+++ Q++ I+
Sbjct: 819 GLPLIGVKVEEGDPIVAYYDDTLGKTKVKTYHSSEPAYIEEVKLLGDDSNEQEGQQITIK 878
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M
Sbjct: 879 YRITRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMF 937
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP++ + + D G+ L + G+NYHG E +Y
Sbjct: 938 VESLAGKAGALHGIAQDSTPWKFNEQDTPA---------DYFGEQLLKAGYNYHGNEPMY 988
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 989 SGATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1048
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLP------RREIGG 940
ERD+L+ HG ++LL DRL CSDY VC CGS+L T P+ RR G
Sbjct: 1049 ERDALIGHGTSFLLQDRLLNCSDYTQTPVCRSCGSILTTQTSVPRIGSMASIRCRRCAVG 1108
Query: 941 LPPRK--APKKVICHACQTSK-----GMETVAMPYVFRYLAAEFAAMNIKM 984
L + A I K TVA+P+V +YL +E +AM IKM
Sbjct: 1109 LDKYEGYAADSDIWEDGHGKKFVGGDDTTTVAIPFVLKYLDSELSAMGIKM 1159
>G3AV19_SPAPN (tr|G3AV19) DNA-directed RNA polymerase OS=Spathaspora passalidarum
(strain NRRL Y-27907 / 11-Y1) GN=SPAPADRAFT_144076 PE=3
SV=1
Length = 1165
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1017 (43%), Positives = 610/1017 (59%), Gaps = 86/1017 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IRCVR DQ+S T L+YL + + F + EYL+PV
Sbjct: 195 MALIRPSFGNRGASYTKYGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVT 254
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + V + DR +++ + +L+++ +
Sbjct: 255 MILKALVETNDREIFDGIVG----------NDVDNSFLTDRLELLLRTYKSYNLYSKQET 304
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 305 LAYLGDKFRVVFGATPDVSDIDVGKEVLKRIVLVHLPNNTDKFRMLLFMIRKLYSLVAGD 364
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKK 237
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ + +F++ + +
Sbjct: 365 CSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQITSDINRGVAINFNDRKYMTR 424
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG+
Sbjct: 425 VFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRGS 483
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I + DS S
Sbjct: 484 FFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIATE-DSDVS------- 535
Query: 358 KISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELK 414
V S + QL P P + V LDG IVG + E KIVA +R K
Sbjct: 536 -------QVTSALAQLGISPADSFAAGPNLCCVQLDGKIVGWT-THEQGKIVADTLRFWK 587
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V S +P DLE+GYVP S G YPGL++F SR +RPV+ + + NK D++GPFE
Sbjct: 588 VEGSHGLPLDLEIGYVPPSTKGQYPGLFIFGGRSRMMRPVKYLPL----NKQ-DILGPFE 642
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 643 QVYMNVAVTPEEIENNIHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMGK 697
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++YTGYDM
Sbjct: 698 QTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAVVAVISYTGYDM 757
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+ E VDL + R DP ++ F + E K KLD D
Sbjct: 758 DDAMIINKSADERGFGYGTVYKVEKVDLGQSRRRGDPITQHFGFGDDEWPETWKEKLDDD 817
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + Y+ + T SEP Y++ V + D ++ Q + I+
Sbjct: 818 GLPLIGVKVEEGDPIVAYYDDTLGKTKVKTYHSSEPAYIEEVKLLGDDTGDQEGQMLTIK 877
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI M
Sbjct: 878 YRITRAPLIGDKFSSRHGQKGVCSRKWPQIDMPFS-ETGIQPDVIINPHAFPSRMTIGMF 936
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP++ S +D+ + D G+ LR+ G+NYHG E +Y
Sbjct: 937 VESLAGKAGALHGIAQDSTPWKFS--EDDTPA-------DYFGEQLRQAGYNYHGNEPMY 987
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 988 SGATGEELRADIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1047
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP--- 943
ERD+L+ HG A+LL DRL CSDY +C CGS+L T P+ IG +
Sbjct: 1048 ERDALIGHGTAFLLQDRLLNCSDYTQTPICRSCGSILTTQTTVPR------IGTMASVRC 1101
Query: 944 RKAPKKV-----------ICHACQTSK-----GMETVAMPYVFRYLAAEFAAMNIKM 984
R+ K+ I Q K TVA+P+V +YL +E +AM IKM
Sbjct: 1102 RRCAVKLDSYQGFAADADIWEDGQGKKFVGGDDTTTVAIPFVLKYLDSELSAMGIKM 1158
>M7NQS3_9ASCO (tr|M7NQS3) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_02400 PE=4 SV=1
Length = 1163
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1031 (42%), Positives = 622/1031 (60%), Gaps = 101/1031 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M +R+SF+ R YT IRCVR D++S T L+YL + + F + EYL+PV
Sbjct: 190 MGLIRSSFTNRGAHYTHFGTQIRCVRPDETSQTNTLHYLSDGNCIFRFSWRKNEYLVPVI 249
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQLSLFT 116
++LKALI+T+D EI ++ +G+ R + D+ +++ + L+T
Sbjct: 250 MILKALINTNDKEIFDSI--------------IGSDRENTVLIDQVEILLRTYKNYELYT 295
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ Q L Y+GE F+ IL ++ ++ ++ + +LK V VHL++N+DKF +LIFM+QKL+SL
Sbjct: 296 QEQTLQYLGEKFRIILNLDEDLTHVSIGEKLLKKVVLVHLENNYDKFRMLIFMIQKLYSL 355
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFDFSEI 232
V G D+PDSLQ+QE+LL G L + +KEK+ED+L S K+ ++++ + + +F E
Sbjct: 356 VSGDCCQDDPDSLQHQEILLGGFLYGMIIKEKIEDYLYSLKNTILQDLRKPNNSVNFFEK 415
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
+ K F + P I + ++ L TG LV+++GLDLQQ G+T+ A++LN+ R+LSHFR
Sbjct: 416 KYISKLFQRVP-NDIGSKLQYFLSTGNLVSSSGLDLQQTTGFTIVAEKLNFYRYLSHFRM 474
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIK 352
VHRGA FA ++TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH+T C+I +
Sbjct: 475 VHRGAFFADIKTTTVRKLLPEAWGFLCPVHTPDGAPCGLLNHLTSKCKIVTS-------- 526
Query: 353 DYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLT----VLLDGCIVGCIPSGEVEKIVA 408
+I +DS LV + P V T V L+G I+G + I
Sbjct: 527 ----------NINIDSIPCLLVSLGVNPTSNIVSTEYSCVQLNGKIIGYCTNKLASHIAQ 576
Query: 409 HIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV +S +P LE+G +P S GG Y GLY+F+S SR RPV+ +++ NK D
Sbjct: 577 LLRHWKVENSHNVPLQLELGLIPKSSGGQYKGLYIFSSRSRMTRPVKYLAL----NKE-D 631
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
+IG FEQV++ I G S + +H E++ + + S++A+ TP+SD NQSPRNMYQ
Sbjct: 632 IIGSFEQVYLNIDIDSHFSGKIDSQY--SHSELNTSNIFSIIASLTPFSDFNQSPRNMYQ 689
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQMAKQTM + ++++R D +LY LQT Q PIVR+ TY Y +D +P GTNA+VAV++Y
Sbjct: 690 CQMAKQTMGTPASSLRYRTDDRLYLLQTGQAPIVRSKTYDLYGLDNFPNGTNAVVAVISY 749
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSN-------IE 641
TGYDMEDA+++NKSS ERG + IY++E V+LT++ + + F N IE
Sbjct: 750 TGYDMEDAIVINKSSYERGFAYSTIYKSEKVNLTQKRQKGEKIIYHFGFGNDKLHPKWIE 809
Query: 642 KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDL- 700
KLD+DGLP +G + +P + ++ +T T + G E V+V+ V + + D+
Sbjct: 810 --KLDADGLPIIGIKLEDGDPLAAYFDETTGKTMIHEYHGIEDVFVEEVRLLGNDSGDME 867
Query: 701 -QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
Q ++I+ R R IGDKFSSRHGQKGVCSQ WP DMPF +G++PD+IINPHAFP+
Sbjct: 868 CQCIHIKLRISRPATIGDKFSSRHGQKGVCSQKWPAADMPF-SESGIQPDIIINPHAFPT 926
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TPF + K +D G+ L + G+ Y
Sbjct: 927 RMTIGMFIESMAGKAGALHGLVEDSTPFTFNEKNT---------AVDYFGKQLIKAGYGY 977
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E YSG+ G + EIF G VYYQRLRHMVSDKFQVRSTG V +T QP
Sbjct: 978 NGNETFYSGITGDIMEAEIFTGIVYYQRLRHMVSDKFQVRSTGPVHSLTHQPVKGRKRAG 1037
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
FGEMERDS++AHG AY+L DRL CSDY +C CGS+L+ + P +
Sbjct: 1038 GIRFGEMERDSIIAHGTAYILQDRLMNCSDYTRTWICRPCGSILSLT-------PTMTMA 1090
Query: 940 G--------LPPRKAPKKVI-----CHACQTSKG--------METVAMPYVFRYLAAEFA 978
G + R +V C Q S G + +A+PYVF+YLA E A
Sbjct: 1091 GTGNSFSSNIRCRLCASEVTGFENDCDIWQDSTGKKFRGGDNIAIIALPYVFKYLATELA 1150
Query: 979 AMNIKMTLKLN 989
+MNI++ L +N
Sbjct: 1151 SMNIRLKLNIN 1161
>A3LWA8_PICST (tr|A3LWA8) DNA-directed RNA polymerase OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RPA135 PE=3 SV=2
Length = 1167
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1027 (42%), Positives = 603/1027 (58%), Gaps = 103/1027 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 194 MAIIRPSFGNRGAAYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQLSLFT 116
++LKALI+T+D EI G VG + DR +++ +Q +L++
Sbjct: 254 MILKALIETNDREIF--------------DGIVGADSANSFLTDRLELLLRTYKQYNLYS 299
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ + L Y+G+ F+ + + S V K VL+ V VHL DN DKF +L+FM++KL+SL
Sbjct: 300 KQETLAYLGDKFRVVFGATPDVSDIEVGKEVLRRIVLVHLPDNADKFRMLLFMIRKLYSL 359
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIF 233
V G DNPD+ Q+QEVLL G L + +KEK+E++LQ+ +++ + +F++
Sbjct: 360 VAGDCSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNINLQIQSDINRGVAINFNDRK 419
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 420 YMSRVFMRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMV 478
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ CRI + D
Sbjct: 479 HRGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRIAT------EASD 532
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRE 412
++ ++ + V P P + V LDG IVG + E KIVA +R
Sbjct: 533 VSQVPKTLAQLGVS-------PAHTFAAGPNLCCVQLDGKIVGWT-THEQGKIVADTLRF 584
Query: 413 LKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGP 472
KV +P DLE+GYVP S G YPGLY+F SR +RP + + + D++GP
Sbjct: 585 WKVEGGHGLPLDLEIGYVPPSAKGQYPGLYIFGGHSRMMRPAKYLPL-----DKPDVLGP 639
Query: 473 FEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
FEQV+M + G TH E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 640 FEQVYMNVAVTPAEIEGNVH----THVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMG 695
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++YTGYD
Sbjct: 696 KQTMGTPGVALMHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAVVAVISYTGYD 755
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDS 647
M+DAMI+NKS+ ERG +G +Y+ E VDL++ R DP ++ F + E + KLD+
Sbjct: 756 MDDAMIINKSADERGFGYGTVYKVEKVDLSQSRRRGDPITQHFGFGDDEWPETWREKLDA 815
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNI 705
DGLP +G + +P + ++ ++ T SEP Y++ V + D ++ Q++ I
Sbjct: 816 DGLPLIGVKVEEGDPIVAFFDETSGKTKVKTYHSSEPAYIEEVKLLGDDSGDQEGQQITI 875
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI M
Sbjct: 876 KYRITRQPNIGDKFSSRHGQKGVCSRKWPQIDMPFS-ETGIQPDVIINPHAFPSRMTIGM 934
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
+ES+A K G+LHG ++TP++ S +D+ + D G+ LR G+NYHG E +
Sbjct: 935 FVESLAGKAGALHGIAQDSTPWKFS--EDDTPA-------DYFGEQLRSAGYNYHGNEPM 985
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GE
Sbjct: 986 YSGATGEELRADIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGE 1045
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+L+ HG A++L DRL CSDY +C CGS+L T P+ IG L
Sbjct: 1046 MERDALIGHGTAFMLQDRLLNCSDYTQTSLCRSCGSILTTQTTVPR------IGSL---- 1095
Query: 946 APKKVICHACQT----------------------------SKGMETVAMPYVFRYLAAEF 977
+ C C T TVA+P+V +YL +E
Sbjct: 1096 --ATIRCRRCSTKLDSYVQKFGYANDSDIWEDGQGKKFVGGDDTTTVAIPFVLKYLDSEL 1153
Query: 978 AAMNIKM 984
+AM IKM
Sbjct: 1154 SAMGIKM 1160
>G3YC52_ASPNA (tr|G3YC52) DNA-directed RNA polymerase OS=Aspergillus niger (strain
ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC
3858a / NRRL 328 / USDA 3528.7) GN=ASPNIDRAFT_55936 PE=3
SV=1
Length = 1236
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1061 (42%), Positives = 611/1061 (57%), Gaps = 111/1061 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIIRGSFVRRGHTYTKYGVQIRSVRPDQTSQTNVLHYLTDGNLTFRFSWRKAEYLVPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + + + V DR +++ + + +R C
Sbjct: 276 MILKALVETNDREIFEGIVGSASSE------GIKNTFVTDRVELLLRVYKAYNTHSRAAC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF +++FM++KL
Sbjct: 330 RAYLGEKFRPVLGVPADMSNEDAGTEFLRKVVLPHLGNQNVTENQDYDKFKMILFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFS 230
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S + ++ ++G F+
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFQPILRDWSNRNGGAKFT 449
Query: 231 EIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFL 287
+ + K R+ + ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF+
Sbjct: 450 DPAFERDFLAKVVKRSNENLGGALEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRFI 509
Query: 288 SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDS 347
SHFR +HRG+ FA L+TTTVRKLLPESWGF CPVHTPDG PCGLLNH+ C I +
Sbjct: 510 SHFRMIHRGSFFAQLKTTTVRKLLPESWGFFCPVHTPDGSPCGLLNHLAHKCLIAT---- 565
Query: 348 QGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIV 407
S D I +++ + V S + V E +TV LDG I+G + I
Sbjct: 566 --SDVDTTHIPKALVQLGVRSDSSVSVT--------ESVTVQLDGRIIGYCSPKQASAIA 615
Query: 408 AHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV S IP +LE+GY+P + GG YPG+Y+F+ +R RPV+++ + +
Sbjct: 616 NTLRRWKVMGSDKIPRELEIGYIPNTNGGQYPGIYMFSQAARMYRPVKHLGL-----DKL 670
Query: 468 DLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNM 526
D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQSPRNM
Sbjct: 671 DYVGPFEQPFMEIACLPQDLISG-----VSTHIEFTPTNILSIVANMTPFSDQNQSPRNM 725
Query: 527 YQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL 586
YQCQM+KQTM IQ+R D KLY LQT QTPIVR Y Y +D +P GTNA+VA++
Sbjct: 726 YQCQMSKQTMGTPGTAIQYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVAII 785
Query: 587 AYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK-------SN 639
+YTGYDM+DAMI+NKSS ERG +G IY+T+ L E+ SR S R K
Sbjct: 786 SYTGYDMDDAMIINKSSHERGFGYGTIYKTKIHSLDEKDSRRGKSRREVTKLFGFAPGGE 845
Query: 640 IE---KSKLDSDGLPHVGQMIRPDEPYCSI----YNASTSS-------THTLKKKGSEPV 685
I ++ LD DGLPH+G ++ + Y+A++ S TH +K K +E
Sbjct: 846 IRADWRATLDEDGLPHIGARVKEGSLVAAWHTVRYDAASDSYVNVDGITHFVKYKDAEEG 905
Query: 686 YVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGT 743
Y+D V + + Q +++++R PR P+IGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 906 YIDSVRILGAESGVEPGQALSVKYRIPRKPIIGDKFSSRHGQKGVCSQLWPAVDMPFS-E 964
Query: 744 TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGL 803
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 965 SGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EENT 1015
Query: 804 LLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT 863
D G LR+ G+NY G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+TG
Sbjct: 1016 AADYFGHQLRKAGYNYFGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTTGP 1075
Query: 864 VDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 923
V+Q+T QP GEMERDSL+AHGAA++L DRL CSD + +C CGS L
Sbjct: 1076 VNQLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAHILQDRLMNCSDATRSWICRDCGSFL 1135
Query: 924 ATSFI------------QPQKLPRREIGGLPPRKAPKKVICHACQTSKGME--------- 962
+T + + G AP V C C E
Sbjct: 1136 STQVAVSSAGSSKARIAAAKAASNQHSGANAISGAPSIVRCRRCAREAVFEDSRADVWED 1195
Query: 963 -------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
VA+P V RYL E AAM I+M ++N
Sbjct: 1196 GDGRRYVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFWVDN 1236
>C4YTC6_CANAW (tr|C4YTC6) DNA-directed RNA polymerase OS=Candida albicans (strain
WO-1) GN=CAWG_05413 PE=3 SV=1
Length = 1166
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1011 (43%), Positives = 605/1011 (59%), Gaps = 74/1011 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 196 MAIIRPSFGNRGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVV 255
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI + E + DR +++ + +L+++ +
Sbjct: 256 MILKALIETNDREIFDGIVGNDTE----------NSFLTDRLELLLRTYKTYNLYSQQET 305
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 306 LAYLGDKFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNADKFRMLLFMIRKLYSLVAGD 365
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ R G +F + +
Sbjct: 366 CAPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDINRGVG-INFDDRKYMT 424
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 425 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 483
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I +
Sbjct: 484 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCKIATEASDVSQ------ 537
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
V +TQL +P P + V LDG IVG + + +R K
Sbjct: 538 ---------VPKALTQLGVLPADSFAAGPNLCCVQLDGKIVGWTTHEQGRIVADTLRYWK 588
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
V+ +P DLE+GYVP S G YPGLY+F SR +RPV+ + L E D++GPFE
Sbjct: 589 VNGGHGLPLDLEIGYVPPSNKGQYPGLYIFGGHSRMMRPVKYLP-LDKE----DIVGPFE 643
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M + P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 644 QVYMNVAVTPEEIENNIHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMGK 698
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM
Sbjct: 699 QTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDM 758
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+TE VDL++ R DP ++ F + E K KLD+D
Sbjct: 759 DDAMIINKSADERGFGYGTVYKTEKVDLSQSRRRGDPITQHFGFGSDEWPEAWKEKLDAD 818
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + Y+ + T SEP Y++ V + D N+++ Q++ I+
Sbjct: 819 GLPLIGVKVEEGDPIVAYYDDTLGKTKVKTYHSSEPAYIEEVKLLGDDSNEQEGQQITIK 878
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M
Sbjct: 879 YRITRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGMF 937
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP+ K N + + D G+ L + G+NYHG E +Y
Sbjct: 938 VESLAGKAGALHGIAQDSTPW-----KFNEQDTPA----DYFGEQLLKAGYNYHGNEPMY 988
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 989 SGATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1048
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLP------RREIGG 940
ERD+L+ HG ++LL DRL CSDY VC CGS+L T P+ RR G
Sbjct: 1049 ERDALIGHGTSFLLQDRLLNCSDYTQTPVCRSCGSILTTQTSVPRIGSMASIRCRRCAVG 1108
Query: 941 LPPRK--APKKVICHACQTSK-----GMETVAMPYVFRYLAAEFAAMNIKM 984
L + A I K TVA+P+V +YL +E +AM IKM
Sbjct: 1109 LDKYEGYAADSDIWEDGHGKKFVGGDDTTTVAIPFVLKYLDSELSAMGIKM 1159
>F7A8N0_MACMU (tr|F7A8N0) DNA-directed RNA polymerase OS=Macaca mulatta
GN=LOC719938 PE=2 SV=1
Length = 1079
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1008 (44%), Positives = 589/1008 (58%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 135 IAMIRPKWKTRGPGYTQYGISMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 194
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 195 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 242
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+G F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 243 QVLNYLGGCFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 302
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 303 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMR 362
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 363 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQNSGLCVVADKLNFIRYLSHFR 414
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 415 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 474
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L + G+T P P P E VLLDG +VG + I
Sbjct: 475 PA----------LLCNLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGIADS 521
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 522 LRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE----- 576
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQ
Sbjct: 577 LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQ 632
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++Y
Sbjct: 633 CQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISY 692
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLD 646
TGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD
Sbjct: 693 TGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRILQKLD 752
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G ++ +PY S N +T + + K E VD + V D + K + V
Sbjct: 753 DDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCV 811
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 812 CITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTI 870
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E
Sbjct: 871 GMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTE 921
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 922 RLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRF 981
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 982 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PP 1030
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1031 SWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1078
>H2P5F5_PONAB (tr|H2P5F5) DNA-directed RNA polymerase OS=Pongo abelii GN=POLR1B
PE=3 SV=1
Length = 1135
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1012 (44%), Positives = 589/1012 (58%), Gaps = 92/1012 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMVRPKWKTRGPGYTHYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICMHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMR 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKELAPGI 574
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 575 ADSLRHFKVLREKRIPPWTEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-- 632
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
LIG EQ+FM + D G TH+E+ P +LSV+AN P+SDHNQSPR
Sbjct: 633 ---LIGTMEQIFMNVAIFEDEVFAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPR 684
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVA
Sbjct: 685 NMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVA 744
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-- 642
V++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 745 VISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGMKPGDPRIL 804
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKD 699
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 805 QKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK- 863
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPS
Sbjct: 864 FKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPS 922
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N+
Sbjct: 923 RMTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNF 973
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 974 YGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQG 1033
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1034 GIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP--------- 1084
Query: 940 GLPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1085 --PPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>B7Z823_HUMAN (tr|B7Z823) DNA-directed RNA polymerase OS=Homo sapiens PE=2 SV=1
Length = 1173
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1011 (44%), Positives = 591/1011 (58%), Gaps = 90/1011 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 229 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 288
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 289 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 336
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 337 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 396
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 397 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMR 456
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 457 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 508
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 509 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 568
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 569 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGI 612
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP +EV +P++ + YPGL+LFT+P R VRPV+N+++ E
Sbjct: 613 ADSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLALGKEE-- 670
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRN
Sbjct: 671 ---LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRN 723
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV
Sbjct: 724 MYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAV 783
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--S 643
++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 784 ISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQ 843
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDL 700
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 844 KLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-F 902
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSR
Sbjct: 903 KCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSR 961
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++
Sbjct: 962 MTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFY 1012
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 1013 GTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGG 1072
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
FG MERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1073 IRFGGMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP---------- 1122
Query: 941 LPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1123 -PPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1172
>G7PMZ1_MACFA (tr|G7PMZ1) DNA-directed RNA polymerase OS=Macaca fascicularis
GN=EGM_05119 PE=3 SV=1
Length = 1135
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1008 (44%), Positives = 589/1008 (58%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTQYGISMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+G F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGGCFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMR 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQNSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L + G+T P P P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGIADS 577
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 578 LRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE----- 632
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQ
Sbjct: 633 LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQ 688
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++Y
Sbjct: 689 CQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISY 748
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLD 646
TGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD
Sbjct: 749 TGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRILQKLD 808
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G ++ +PY S N +T + + K E VD + V D + K + V
Sbjct: 809 DDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCV 867
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 868 CITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTI 926
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E
Sbjct: 927 GMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTE 977
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 978 RLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRF 1037
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 1038 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PP 1086
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1087 SWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>F7A8N8_MACMU (tr|F7A8N8) DNA-directed RNA polymerase OS=Macaca mulatta
GN=LOC719938 PE=2 SV=1
Length = 1135
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1008 (44%), Positives = 589/1008 (58%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTQYGISMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+G F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGGCFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMR 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQNSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L + G+T P P P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGIADS 577
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 578 LRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE----- 632
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQ
Sbjct: 633 LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQ 688
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++Y
Sbjct: 689 CQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISY 748
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLD 646
TGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD
Sbjct: 749 TGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRILQKLD 808
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G ++ +PY S N +T + + K E VD + V D + K + V
Sbjct: 809 DDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCV 867
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 868 CITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTI 926
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E
Sbjct: 927 GMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTE 977
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 978 RLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRF 1037
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 1038 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PP 1086
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1087 SWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>R4XFN0_9ASCO (tr|R4XFN0) Uncharacterized protein OS=Taphrina deformans PYCC 5710
GN=TAPDE_004946 PE=4 SV=1
Length = 1205
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1035 (43%), Positives = 605/1035 (58%), Gaps = 88/1035 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +RNSF R YT+ IRCVR DQ+S T ++YL + + L F + EYL+P
Sbjct: 205 IALIRNSFQNRGGSYTEFGTQIRCVRPDQTSQTNTVHYLSDGNCILRFSWQKNEYLVPAV 264
Query: 61 IVLKALIDTSDLE-----IRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLF 115
+VLKAL+ +SD + I ++ K+ + + DR +++ +Q SL
Sbjct: 265 MVLKALMSSSDRDLFDAIIGSDTKNTF---------------LTDRVELLLRSFKQYSLH 309
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFS 175
+ L Y+G F+ ++ ++++ V + VL V VHL DN DKF LLIFM++KL+S
Sbjct: 310 NQESTLEYLGAKFRIVMGAPEDETDVAVGRRVLDRIVLVHLKDNKDKFRLLIFMIRKLYS 369
Query: 176 LVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK--RKSGTFDFSEIF 233
LV G DNPDS +QE++L G L +KEKLED L+ K ++ + T F
Sbjct: 370 LVAGDCSPDNPDSPAHQEIMLGGFLYGQIIKEKLEDVLKGIKAQINIDLRRPTTSAGVDF 429
Query: 234 VVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
V K KT A+ I + + L TG LV+NTGLDLQQ GY V A++LN+ R+LSHF
Sbjct: 430 VKKTYLTKTVAKVNSDIGSKLAYFLSTGNLVSNTGLDLQQTTGYVVVAEKLNFYRYLSHF 489
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
R VHRG+ FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH+ C I + S +
Sbjct: 490 RMVHRGSFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLAHKCEIVT---SAIT 546
Query: 351 IKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHI 410
KD ++ +L + +D + + G TV LDG I+G I +
Sbjct: 547 AKDTSRLTDLLLAMGIDDAQS------VSGGGANRSTVQLDGRIIGSCTHKLAAAIAKDL 600
Query: 411 RELKVS-----------------SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRP 453
R+ KV+ + IP DLE+G VP S GG YPG+Y+F +R +RP
Sbjct: 601 RKWKVTRKIKSKELEAKDNFDQLQNYHIPLDLEIGLVPPSKGGQYPGIYIFGGIARMMRP 660
Query: 454 VR-----NISILSNENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGML 507
V+ + S + K+ D +G FEQV+M+I C PD TH E PT ML
Sbjct: 661 VKYLHKVDASGQQKKRKDEDCVGSFEQVYMDIACMPD-----EIIDKVTTHIEHAPTNML 715
Query: 508 SVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTY 567
S+VAN TP+SD NQSPRNMYQCQM KQTM + ++HR D KLY +QT QTPIVR + +
Sbjct: 716 SIVANLTPFSDFNQSPRNMYQCQMGKQTMGTPATALRHRTDNKLYRIQTGQTPIVRPALH 775
Query: 568 TKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSR 627
Y ID +P GTNAIVAV++YTGYDMEDAMILNKSS ERG +G IY++E VDL ++ +
Sbjct: 776 DTYGIDNFPNGTNAIVAVISYTGYDMEDAMILNKSSHERGFGYGTIYKSEKVDLKDKMRK 835
Query: 628 SDPSSRMFRKSNIEKSK-----LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGS 682
+ + F N + + LD DG +G + +P + Y+ T ++ GS
Sbjct: 836 GESNHLHFGFGNFPRPRRCETHLDDDGFAFIGAKLTDGDPMAAYYDDITGKCTVVEYHGS 895
Query: 683 EPVYVDYVAVDVKNKKD--LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E VD V + + D QKV + R R+P+IGDKFSSRHGQKGVCSQ WP +DMPF
Sbjct: 896 ETAIVDEVRILGNDAGDSECQKVQYQLRVTRSPIIGDKFSSRHGQKGVCSQKWPSIDMPF 955
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+GM+PD+IINPHAFPSRMTI M +ES+A K G+L G +ATPF + +
Sbjct: 956 -SESGMQPDVIINPHAFPSRMTIGMFVESIAGKAGALRGHAQDATPFTYT---------E 1005
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ L ++GFNYHG E +YSGV G+E +I+IG VYYQRLRHMVSDK QVR+
Sbjct: 1006 QATAADFFGEQLAQQGFNYHGNEPMYSGVTGQEFKADIYIGCVYYQRLRHMVSDKVQVRT 1065
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ +T QP FGEMERDS++AHG A++L DRL+ CSDY ++ VC CG
Sbjct: 1066 TGPVNPLTHQPVKGRKRGGGIRFGEMERDSIIAHGTAFILQDRLNNCSDYDLSWVCRTCG 1125
Query: 921 SMLATSFIQPQKLPR---------REIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFR 971
S+L+ + + ++ GL ++ + VA+P+VFR
Sbjct: 1126 SILSILQVTAAEDGESSAKCLNCAKKANGLEYGDEVWQLNDRKYTGGDHVAKVAIPFVFR 1185
Query: 972 YLAAEFAAMNIKMTL 986
YL+AE AAMNIKM+L
Sbjct: 1186 YLSAELAAMNIKMSL 1200
>D8PQK3_SCHCM (tr|D8PQK3) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_80314 PE=3 SV=1
Length = 1226
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1052 (42%), Positives = 612/1052 (58%), Gaps = 108/1052 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SF+ R YT AV IRCVR DQ+S+T L+YL N A L F + +EY++P+
Sbjct: 218 ISLLRPSFANRGPSYTPHAVQIRCVRPDQTSVTNTLHYLSNGMAMLRFSWRKQEYVIPIM 277
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + + +E + DR +++ + ++ T QC
Sbjct: 278 LILKALVGASDKEI---FEGVVMQDFEN-------TFLTDRVELLLRSFKAYTMRTGNQC 327
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ +L ++ + V ++ V VHL +K+N+L+FML+KL++LV G
Sbjct: 328 LEYLGDRFRVVLNLPEDWTNLAVGTWLVNKMVLVHLPTPREKYNMLLFMLRKLYALVSGE 387
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL---QSGKDEMKRKSGTFDFSEIFVVKK 237
DNPDS Q+QEVLLPG L + +KE+ E+ L ++G R DF++ + K
Sbjct: 388 CCADNPDSPQHQEVLLPGTLYGMIIKERCEEVLNGIRAGIMSDVRNGVVVDFNDKRYMTK 447
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
K + I + N L TG LV+ TGLDLQQ +G+T+ A++LN+ R++SHFR +HRGA
Sbjct: 448 VMSKV-SFDIGAKLSNFLATGNLVSPTGLDLQQASGFTIVAEKLNWQRYISHFRCIHRGA 506
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRIT+ I
Sbjct: 507 FFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRITTTP----------LI 556
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
I +L GMTQ P + V LDG ++G +++ ++R K
Sbjct: 557 VAHIPALLAAHGMTQ--PFAGRINGRTNICVQLDGRVIGWARPAVAQQLANNLRIWKTEG 614
Query: 418 SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
+P DLE+G V S GG YPGL+LF+S SRF+RPV+ + N D +G FEQV+
Sbjct: 615 MHEVPMDLEIGLVLESKGGQYPGLFLFSSRSRFMRPVKYLP-----NGRDDQVGSFEQVY 669
Query: 478 MEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
M I C P+ + G S H E +PT LS++AN TP+SD NQSPRN+YQCQM KQTM
Sbjct: 670 MNIACLPEEIEPGVTS-----HVEHNPTNFLSILANMTPFSDFNQSPRNIYQCQMGKQTM 724
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
S I HR D KLY LQT Q+PIVR + + Y +D +P GTNAIVAV++YTGYDMEDA
Sbjct: 725 GTPSTAINHRTDNKLYRLQTGQSPIVRPALHNTYAMDAFPNGTNAIVAVISYTGYDMEDA 784
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS-------------RMFRKSNIEKS 643
MILNKS+ ERG +G +Y++ +DL +Q + SS R K++
Sbjct: 785 MILNKSAHERGFGYGTVYKSAIIDLKDQKGATKSSSAPTLHFGLGKDIRRTGDKAHACTE 844
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQ 701
+ DGLP VG + +P + N T T K KG E YVD V + + D LQ
Sbjct: 845 FVGEDGLPLVGVKLTAGDPMAAFINDVTGRTQFQKYKGDETAYVDQVRLLGGDNGDTELQ 904
Query: 702 KVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRM 761
K+ + R R+PVIGDKFSSRHGQKGVCSQ WP VDMPF +GM+PD+IINPHAFPSRM
Sbjct: 905 KIQVTLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGMQPDVIINPHAFPSRM 963
Query: 762 TIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHG 821
TI ML+ES+A K G++HG +ATPF+ S ++D +D G+ L G+NY+G
Sbjct: 964 TIGMLVESMAGKAGAMHGLAQDATPFKFS-EEDTA--------VDYFGKQLLAAGYNYYG 1014
Query: 822 LEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 881
E +YSG+ G+E +I++G VYYQRLRHMV DKFQVR+TG VD +TRQP
Sbjct: 1015 NEPMYSGITGQEFAADIYLGVVYYQRLRHMVLDKFQVRTTGQVDPLTRQPVKGRKRGGGI 1074
Query: 882 XFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG-- 939
GEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + L R +G
Sbjct: 1075 RLGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGY-DDVALGERVLGKD 1133
Query: 940 ------------------------------------GLPPRKA-------PKKVICHACQ 956
P R A P + + +
Sbjct: 1134 ASFRPSGPGGEYCRVCRKAAEEEEERARQNAAAPTDDAPRRPAADVRVAIPSQNVLGTAK 1193
Query: 957 TSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
++ VA+PYVFRYL AE A+M I ++L++
Sbjct: 1194 KGGDLDVVAVPYVFRYLCAELASMGIGVSLEV 1225
>G1XG79_ARTOA (tr|G1XG79) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00083g9 PE=3 SV=1
Length = 1189
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/1030 (43%), Positives = 602/1030 (58%), Gaps = 101/1030 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R+S+++R YT+ V IRCVR DQS +T ++YL + + F + REYL+PV
Sbjct: 209 MAVIRSSYAKRGPSYTNMGVQIRCVRPDQSCMTNVIHYLSDGNITFRFSWRKREYLVPVM 268
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVG-TQRVD----DRARMIIEEVRQLSLF 115
++LKAL+DT+D EI YE G VG QR D DR +++ + +L+
Sbjct: 269 MILKALVDTNDREI-----------YE---GIVGLDQREDTFLTDRVELLLRTYKAYNLY 314
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFS 175
+R + L Y+G+ F+ ++ + S V K LK V V+L+D+ DK L+FM++KL+S
Sbjct: 315 SRHETLAYLGDKFRIVMQVSPDVSDVEVGKLFLKRIVLVYLNDDGDKQRQLLFMIKKLYS 374
Query: 176 LVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRK---SGTFDFSEI 232
LV GT DN D+ Q+ EVLL G L LKEK E++L + + +++ +F
Sbjct: 375 LVAGTCAADNVDAAQHHEVLLGGFLYGQILKEKFEEYLLNIRSQVRSDLMGGAKVEFGSP 434
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
++K K R I S+ L TG L + +GLDLQQ G+TV A++LN+ R++SHFR
Sbjct: 435 QYIRKMLGKVNER-IGESLHYFLSTGNLSSPSGLDLQQTTGFTVVAEKLNFYRYISHFRM 493
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIK 352
VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ CRI +
Sbjct: 494 VHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRIATI------TS 547
Query: 353 DYFKIKISILDILVDSGMTQLVPKLLLPGPPEV-LTVLLDGCIVGCIPSGEVEKIVAHIR 411
D ++ +L + V S +LP P + L+V LDG I+G + ++ +R
Sbjct: 548 DTSQVGPLVLTLGVHSAK-------VLPVPTDATLSVQLDGRILGWCSPRDARRVAESLR 600
Query: 412 ELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
KVS + +P DLE+GYVP S GG YPG+YLF+ +R +RPV+ + L E D +G
Sbjct: 601 FYKVSGTHNVPLDLEIGYVPTSNGGQYPGVYLFSQEARMIRPVKYLP-LDKE----DFVG 655
Query: 472 PFEQVFMEIRCPD----GGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
PFEQ F+ I D GD +H E PT +LS+VAN TP+SD NQSPRNMY
Sbjct: 656 PFEQPFLNIAVTDPEIKSGD---------SHVEFDPTNILSIVANMTPFSDFNQSPRNMY 706
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM I+HR D K+Y LQT Q+P+VR Y Y +D +P G NA+VAV+A
Sbjct: 707 QCQMGKQTMGTPGTAIRHRTDNKMYRLQTGQSPVVRAPLYNTYGLDNFPNGMNAVVAVIA 766
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDP-------------SSRM 634
YTGYDM+DAMI+NKS+ ERG +G +Y+TE DL E+ P +
Sbjct: 767 YTGYDMDDAMIINKSAHERGFGYGTVYKTEKYDLAEKSKSKSPVLAFGWGWAAIGADAAA 826
Query: 635 FRKSNIEKSKL-----DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDY 689
K K K D DGLP VGQ I +P +N T T K KGSE Y++
Sbjct: 827 LAKYKAMKDKYSETLDDMDGLPMVGQKIVEGQPVAVYHNMGTGETFFFKYKGSEDAYIEE 886
Query: 690 VAVDVKNKKD--LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMR 747
V + + D Q ++++FR R+P+IGDKFSSRHGQKGVCSQ WP VDMPF +G++
Sbjct: 887 VRLLGNDVGDSICQAISVKFRITRSPLIGDKFSSRHGQKGVCSQKWPAVDMPFS-ESGIQ 945
Query: 748 PDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDD 807
PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ GE + D
Sbjct: 946 PDVIINPHAFPSRMTIGMFVESMAGKAGTLHGFAQDSTPFK------FGEQHTA---FDY 996
Query: 808 LGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQV 867
G+ L+ G+NY+G E +YSG+ G+E +I++G VYYQRLRHMV+DK+QVRSTG VD
Sbjct: 997 FGEQLKSAGYNYYGNEPMYSGITGQEFHADIYLGVVYYQRLRHMVNDKYQVRSTGPVDSR 1056
Query: 868 TRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF 927
TRQP GEMERDSLLAHG A+L+ DRL CSDYH VC CGS L+T+
Sbjct: 1057 TRQPVKGRKRMGGLRIGEMERDSLLAHGTAFLVQDRLLNCSDYHQTWVCRGCGSFLSTT- 1115
Query: 928 IQPQKLPRREIGGLPPRKAPKKV---ICHACQTSKGM----------ETVAMPYVFRYLA 974
P R R A K I G+ V +PYV +YL
Sbjct: 1116 --PTAAGERRAEVRCRRCANKATEFDIGKKGYWEDGLGNRFIGGEDTTVVVIPYVLKYLD 1173
Query: 975 AEFAAMNIKM 984
E AM I+M
Sbjct: 1174 VELLAMGIQM 1183
>E2REX8_CANFA (tr|E2REX8) DNA-directed RNA polymerase OS=Canis familiaris GN=POLR1B
PE=3 SV=2
Length = 1135
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1001 (44%), Positives = 588/1001 (58%), Gaps = 70/1001 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L K + + V R+++EE T+ Q
Sbjct: 251 FALKALVSFSDYQIFQELIK------GKEEDSFFRNSVSQMLRIVMEE----GCSTQKQV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L+ + A+ + + +HL N +KF +L M +KLF+L G
Sbjct: 301 LNYLGERFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE 360
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ DNPDSL NQEVL PG L ++LKEK+E WL S K + ++S + S + + F
Sbjct: 361 CMEDNPDSLVNQEVLTPGQLFLMFLKEKMESWLVSIKIALDKRSQKTNVSINTENLMRIF 420
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA F
Sbjct: 421 NL--GTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADF 478
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + S+
Sbjct: 479 AKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQCVYTASVPT------ 532
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+L G+T P P P E VLLDG +VG + I +R KV
Sbjct: 533 ----LLCSLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPSIAESLRHFKVLK 585
Query: 418 SAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E LIG EQ+
Sbjct: 586 EKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LIGTMEQI 640
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
FM I D G TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQT
Sbjct: 641 FMNIAIFEDEVLAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQT 695
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDMED
Sbjct: 696 MGFPLLTYQARSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMED 755
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHV 653
AMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD DGLP +
Sbjct: 756 AMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFI 815
Query: 654 GQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHP 710
G ++ +PY S N +T + K E VD + V D N + + V I R P
Sbjct: 816 GARLQYGDPYYSYLNLNTGESFVTYYKSKENCIVDNIKVCSNDTGNGR-FKCVCITMRVP 874
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
RNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+
Sbjct: 875 RNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESM 933
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K +LHG +ATPF S E S L+ G++L+ G+N++G E LYSG+
Sbjct: 934 AGKSAALHGLCHDATPFTFS-------EENSA--LEYFGELLKAAGYNFYGTERLYSGIS 984
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+
Sbjct: 985 GIELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDA 1044
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP--- 947
LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1045 LLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRN 1093
Query: 948 KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1094 RKYNCTLCDRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>C0NSE6_AJECG (tr|C0NSE6) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)
GN=HCBG_06076 PE=3 SV=1
Length = 1242
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1071 (42%), Positives = 610/1071 (56%), Gaps = 124/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R+SF++R + YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRSSFTKRGQTYTKYGIQIRSVRIDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L +G + V DR +++ + L+ R
Sbjct: 275 MILKALVETNDREIFERLVG------REGSEGIKNSFVTDRVELLLRTYKGYKLYGRDDT 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+P+L + D V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRPVLGMPADIPDDMVGAEFLRKVVLPHLGNQNVTESQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL++ +D R
Sbjct: 388 LYTLVAGECAPDNPDAVSNQEVLLGGSLYGMLLKERLEEWLRAFGPIARDWSFRNQNA-R 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
FS+ K+ + +R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ R
Sbjct: 447 FSDPRFEKEFLSRIVSRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVIAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCEIATSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G + ++ D G+T L E + V LDG I+G +
Sbjct: 567 LDVSG-----------VPQVISDLGVTYESSVSL----DESVAVQLDGRILGYCSPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV+ + +P +LE+GY+P S G YPG+Y+F+ +R +RPV+ + +
Sbjct: 612 MISDTLRYWKVAGNKSLPVELEIGYIPNSNRGQYPGIYIFSQCARMMRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQSP
Sbjct: 667 DKLDYVGPFEQPFMEIACVPSDIMSG-----ISTHVEFDPTHILSIVANMTPFSDFNQSP 721
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM+KQ M +I++R D KLY LQT QTP+VRT Y Y +D +P G NA+V
Sbjct: 722 RNMYQCQMSKQAMGTPGASIEYRTDNKLYRLQTGQTPVVRTPLYNSYGLDNFPNGMNAVV 781
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FR 636
AVL+YTGYDM+DAMI+NKS+ +RG G IY+T+ L ++ SR +R F
Sbjct: 782 AVLSYTGYDMDDAMIINKSAHDRGFGWGTIYKTKIYSLDDKESRGRGKARREVSKLFGFA 841
Query: 637 KSNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKG 681
++ K + LD DGLPH+G + +P + Y TH LK K
Sbjct: 842 PGSLIKGEWRHALDEDGLPHIGARVTEGSIVAAWHTVRFDPVSNSYTNIDGQTHLLKYKD 901
Query: 682 SEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMP 739
+E Y+D V + Q ++++FR PR PVIGDKFSSRHGQKGVCSQLWP DMP
Sbjct: 902 TEEGYIDNVRIFGSETGGDPCQAISVKFRVPRKPVIGDKFSSRHGQKGVCSQLWPATDMP 961
Query: 740 FCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE 799
F TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR S +
Sbjct: 962 FS-ETGIQPDIIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDSTPFRFSEEHTAS--- 1017
Query: 800 KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVR 859
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKFQVR
Sbjct: 1018 ------DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKFQVR 1071
Query: 860 STGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 919
+TG V+ +T QP GEMERDSLLAHGAA+LL DRL CSD + +C C
Sbjct: 1072 TTGPVNALTGQPVKGRAKGGGIRVGEMERDSLLAHGAAFLLQDRLMNCSDTTRSWICRTC 1131
Query: 920 GSMLATS-----FIQPQKLPR------------REIGGLPPRKAPKKVI-CHACQTSKGM 961
GS L+T F+ P K P R G + V+ C C
Sbjct: 1132 GSFLSTQVAVSKFMAPSKNPAMAAVAKSSSGLGRPGGAMGALDGGAGVVRCRRCAKEAVF 1191
Query: 962 E----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V +YL E A M +KMT K+NN
Sbjct: 1192 DDPRAEVWEDGEGRRFVGGDDTTVVAVPGVLKYLDVELATMGVKMTFKVNN 1242
>L9JM71_TUPCH (tr|L9JM71) DNA-directed RNA polymerase OS=Tupaia chinensis
GN=TREES_T100021681 PE=3 SV=1
Length = 1135
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1000 (44%), Positives = 593/1000 (59%), Gaps = 68/1000 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMVRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL++ SD +I L K + + V R+++EE T+ Q
Sbjct: 251 FALKALVNFSDYQIFQELIK------GKEEDSFFRNSVSQMLRIVVEE----GCSTQKQV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L S + A+ + + +HL + +KF +L M +KLF+L G
Sbjct: 301 LNYLGECFRVKLNLTDWYSNEQAAEFLFDQCICIHLKSSTEKFYVLCLMTRKLFALAKGE 360
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ +NPDSL NQEVL PG L ++LKEK+E WL S K + +++ + S + + F
Sbjct: 361 CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKRAQKTNVSINTENLMRIF 420
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA F
Sbjct: 421 NL--GTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFVRYLSHFRCVHRGADF 478
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 479 AKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFVYTTSIPA------ 532
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+L + G+T P P P E VLLDG +VG + + +R KV
Sbjct: 533 ----LLCNLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGVADSLRHFKVLR 585
Query: 418 SAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP +EV +P++ + YPGL+LFT+P R VRPV+N+ + E LIG EQ+
Sbjct: 586 EKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LIGTMEQI 640
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FM I + ++ TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQTM
Sbjct: 641 FMNIAIFED----EVAAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTM 696
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
F T Q R+D KLY LQTPQ+P+VR Y Y +D YP GTNAIVAV++YTGYDMEDA
Sbjct: 697 GFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYEMDNYPIGTNAIVAVISYTGYDMEDA 756
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGLPHVG 654
MI+NK+S ERG HG +Y++E +DL+E+ + D S K ++ KLD DGLP +G
Sbjct: 757 MIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRTLQKLDDDGLPFIG 816
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPR 711
++ +PY S N +T + K E VD + V D + K + V I R PR
Sbjct: 817 TKLQYGDPYYSYLNLNTGESFVTYYKSKENCIVDNIKVCSNDTGSGK-FKCVCITMRVPR 875
Query: 712 NPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVA 771
NP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A
Sbjct: 876 NPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESMA 934
Query: 772 AKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYG 831
K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG+ G
Sbjct: 935 GKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGISG 985
Query: 832 KELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSL 891
EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+L
Sbjct: 986 LELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDAL 1045
Query: 892 LAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---K 948
LAHG ++LLHDRL CSD +A VC CGS+L+ +P PP + +
Sbjct: 1046 LAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRNR 1094
Query: 949 KVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1095 KYNCALCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>Q4V967_DANRE (tr|Q4V967) DNA-directed RNA polymerase OS=Danio rerio GN=polr1b PE=2
SV=1
Length = 1132
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/996 (43%), Positives = 595/996 (59%), Gaps = 66/996 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R F R +GYT A+ +RCV+ + +++ + L+YL N + + F + + LP+G
Sbjct: 190 IAVSRPKFKSRGQGYTQYAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYRKELFFLPLG 249
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
LKAL+D SD +I L K + + K V + R+++++ T+++
Sbjct: 250 FALKALVDYSDYQIYQELIKGREDNSFYKSC-------VSEMLRIVMDQ----GCTTKIK 298
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
LNY+GE F+ L + +++ A +L + + +HL + +KF +L M +KLFS
Sbjct: 299 VLNYLGERFRVKLNLPEWFTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQ 358
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKCF 239
+ +NPDS EVL PG L ++LKEK+E WL S K +++K + K F
Sbjct: 359 ECMEENPDSPMFHEVLTPGQLYLMFLKEKMEGWLVSVKLALEKKPQRVGGLTPDSMTKLF 418
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ + E +L TG L++ TGL + Q +G V AD+LN++R+LSHFR VHRGA+F
Sbjct: 419 NM--GTDLTKAFEYLLATGNLMSKTGLGMLQNSGLCVVADKLNFIRYLSHFRCVHRGAAF 476
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF-KIK 358
A +RTTTVRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I + ++ +
Sbjct: 477 AKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEIVAPVYPTSTLPGLLCSLG 536
Query: 359 ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSS 418
++ D + P V+LDG ++G + ++ +R KV
Sbjct: 537 VNAADGNPGQAYSDCYP------------VILDGAMIGWVEKEVAPSVIESLRRFKVLGE 584
Query: 419 AMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
+P E+ VP + + YPGLYLFT+P R VR VRN+S+ E LIG FEQV+
Sbjct: 585 KKVPPWTEIVLVPQTGKASLYPGLYLFTTPCRMVRTVRNLSLGKQE-----LIGIFEQVY 639
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
+ + G TH+E+ P MLSVVA P+SDHNQSPRNMYQCQM+KQTM
Sbjct: 640 LNV----GIFEKEIEDGVTTHQELFPHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMG 695
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
F + Q+R+D KLY LQTPQ+P+VR + Y Y++D YP GTNAIVAV++YTGYDMEDAM
Sbjct: 696 FPLHSYQYRSDNKLYRLQTPQSPLVRPAMYDHYDVDNYPIGTNAIVAVISYTGYDMEDAM 755
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVGQ 655
I+NKSS ERG HG +Y+TE +DL+E+ + D S K K KLD+DGLP +G
Sbjct: 756 IVNKSSWERGFAHGSVYKTEIIDLSEK-VKGDDSIVFGVKPGDPKVMGKLDADGLPFIGS 814
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNP 713
+++ +P+ + +T +H K E VD + V + +++ + R PRNP
Sbjct: 815 VLKYGDPFYGYISLNTGQSHVYFYKYQESCVVDNIKVCSNETGTGRFKRICVTSRVPRNP 874
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K
Sbjct: 875 TIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMSPDILFNPHGFPSRMTIGMLIESMAGK 933
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
SLHG +ATPF S E S L+ G++L+ G+NY+G E LYSG+ G E
Sbjct: 934 SASLHGLCHDATPFTFS-------EENSA--LEHFGELLKAAGYNYYGTERLYSGLSGLE 984
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
L +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLA
Sbjct: 985 LEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPMGGRNVQGGIRFGEMERDALLA 1044
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKV 950
HG ++LLHDRL CSD +A VC CGS+L+T +P PP + +K
Sbjct: 1045 HGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSTLLEKP-----------PPNWSATRHRKT 1093
Query: 951 ICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
IC C S +ETV++PYVF+Y AE AAMNIK+ L
Sbjct: 1094 ICLLCNKSDSIETVSVPYVFKYFVAELAAMNIKIKL 1129
>H0WW57_OTOGA (tr|H0WW57) DNA-directed RNA polymerase (Fragment) OS=Otolemur
garnettii GN=POLR1B PE=3 SV=1
Length = 1166
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1002 (44%), Positives = 587/1002 (58%), Gaps = 73/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 223 IAMIRPKWKSRGPGYTQYGISMHCVREEHSAVNMNLHYLENGTVTLNFIYRKELFFLPLG 282
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R++ EE T+
Sbjct: 283 FALKALVSFSDYQIFQELI--------KGKEDDSFFRNSVSQMLRIVTEE----GCSTQK 330
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ ++ + +HL N +KF +L M +KLF+L
Sbjct: 331 QVLNYLGECFRVKLNLPDWYPNEQAAEFLVNQCICIHLKSNTEKFYMLCLMTRKLFALAK 390
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
G + DNPDSL NQEVL PG L ++LKEK+E WL S K +K+ + S + K
Sbjct: 391 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIAFDKKAQKTNVSMNTDNLMK 450
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F T ++ E + TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA
Sbjct: 451 IF--TLGSDLTRPFEYLFATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGA 508
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F +
Sbjct: 509 DFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQF--------VYTT 560
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
I +L L G+T P P P E VLLDG +VG + I +R KV
Sbjct: 561 SIPVL--LCSLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKDLAPGIAHSLRHFKV 615
Query: 416 SSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV +P++ + YPGLYLFT+P R VRPV+N+ + E LIG E
Sbjct: 616 LREKRIPPWMEVALIPMTGKASLYPGLYLFTTPCRLVRPVQNLELGKEE-----LIGTME 670
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
Q+FM I D G TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM K
Sbjct: 671 QIFMNIAIFEDEVIAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGK 725
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDM
Sbjct: 726 QTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPCMYDYYDMDNYPIGTNAIVAVISYTGYDM 785
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLP 651
EDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD DGLP
Sbjct: 786 EDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLP 845
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRH 709
+G ++ +PY N +T + + K E VD + V + + + I R
Sbjct: 846 FIGAKLQYGDPYYGYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGRFKCICITMRV 905
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES
Sbjct: 906 PRNPTIGDKFASRHGQKGILSRLWPTEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIES 964
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K +LHG +ATPF SE S L+ G+ML+ G+N++G E LYSG+
Sbjct: 965 MAGKSAALHGLCHDATPFTF--------SENSA--LEYFGEMLKAAGYNFYGTERLYSGI 1014
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD
Sbjct: 1015 SGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERD 1074
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP-- 947
+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1075 ALLAHGTSFLLHDRLFNCSDRSVAHVCVECGSLLSPLLEKP-----------PPSWSAMR 1123
Query: 948 -KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1124 NRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1165
>F7B818_MONDO (tr|F7B818) DNA-directed RNA polymerase OS=Monodelphis domestica
GN=POLR1B PE=3 SV=1
Length = 1135
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1002 (44%), Positives = 589/1002 (58%), Gaps = 76/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + + CVR + +++ + L+YL N S + F + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTHYGISMHCVRDEHTAINMNLHYLENGSVMVNFIYHKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
VLKAL+ SD +I L E + V R+++EE T+ Q
Sbjct: 251 FVLKALVAFSDYQIFQELIKGREEN------SFFRNCVSQMLRVVMEE----GCITQKQV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTV--AKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
LNY+GE F+ L+ D Y V A+ +L V +HL N +KF +L M +KLF+
Sbjct: 301 LNYLGERFRVKLS--LPDWYTNVQAAEFLLNQCVCIHLKSNEEKFYVLCLMTRKLFTFAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
+ +NPDSL NQEVL PG LI ++LKEK+E WL S K + +++ + S + K
Sbjct: 359 EECMEENPDSLMNQEVLTPGRLILMFLKEKMEAWLVSVKIALDKRAQKTNVSMNTENLMK 418
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F ++ E L TG L + TGL + Q +G V AD+LN++R+LSHFR VHRGA
Sbjct: 419 IFSM--GLDLTRPFEYFLATGNLRSKTGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGA 476
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
+FA +RTTTVRKLLPESWGFLCPVHTPDGEPCGL+NHMT C + + Q
Sbjct: 477 AFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEVVT----QAVYTS---- 528
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
SI +L G+T P P P E V+L+G +VG + I +R KV
Sbjct: 529 --SIAPLLCSLGVT---PFDGTPSQPYSECYPVMLNGIMVGWVEKDLAPAITDSLRNFKV 583
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP E+ +P + YPGL+LFT+P R +RPV+N+ + E LIG E
Sbjct: 584 LGKKQIPPWTEIVLIPKTGKPSLYPGLFLFTTPCRMIRPVQNLELGKEE-----LIGTLE 638
Query: 475 QVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
Q+FM I + P TH+E+ P +LSVVAN P+SDHNQSPRNMYQCQM
Sbjct: 639 QIFMNIAIFE------NEIVPGITTHQELFPHSLLSVVANFIPFSDHNQSPRNMYQCQMG 692
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYD
Sbjct: 693 KQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYD 752
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGL 650
MEDAMI+NK+S ERG HG +Y+TE +DL+E+ + D S K + KLDSDGL
Sbjct: 753 MEDAMIVNKASWERGFAHGSVYKTELIDLSEKIKQGDDSLVFGVKPGDLRVLQKLDSDGL 812
Query: 651 PHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRF 707
PH+G +++ +P+ S N +T + K E VD + V D N K + + I
Sbjct: 813 PHIGSLLKYGDPFYSYLNINTGESFVTYYKNKENCLVDNIKVCSNDSGNGK-FKSICITM 871
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+
Sbjct: 872 RIPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLI 930
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K +LHG +ATPF S E S L G+ML+ G+N++G E LYS
Sbjct: 931 ESMAGKSAALHGLCHDATPFTFS-------EENSA--LGYFGEMLKAAGYNFYGTERLYS 981
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
G+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEME
Sbjct: 982 GISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEME 1041
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1042 RDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSA 1090
Query: 948 ---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
+K C C S ++TV++PYVFRY AE AAMNIK+ L
Sbjct: 1091 MRNRKYNCTVCNQSDTIDTVSVPYVFRYFVAELAAMNIKVKL 1132
>A5DAV4_PICGU (tr|A5DAV4) DNA-directed RNA polymerase OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=PGUG_00409 PE=3 SV=2
Length = 1166
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1022 (42%), Positives = 616/1022 (60%), Gaps = 84/1022 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IRCVR DQ+S T L+YL + + F + EYL+PV
Sbjct: 194 MAIIRPSFGNRGASYTKFGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGA-VGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+++KAL++TSD EI ++ GA + DR +++ ++ +L+++ +
Sbjct: 254 MIMKALVETSDREI-----------FDGIVGADTSNSFLTDRLELLLRSYKKYNLYSKQE 302
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+G+ F+ + + S V + VLK V VHL+D DKF +L+FM++KL++LV G
Sbjct: 303 TLAYLGDKFRVVFGATPDVSDIEVGQEVLKRIVLVHLEDPKDKFRMLLFMIRKLYTLVAG 362
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQS + ++ + +F++ +
Sbjct: 363 DCSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQSIRLQISSDINRGVAVNFNDRRYMS 422
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 423 RVFLRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMVHRG 481
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I + D
Sbjct: 482 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIAT------EASDVST 535
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELKV 415
+ ++ + V P P + + LDG +VG + + E KIVA +R KV
Sbjct: 536 VPAALAQLGVS-------PAHAFAAGPNLCCIQLDGKVVGWV-THEHGKIVADTLRFWKV 587
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ +P DLE+GYVP S G YPGLY+F SR +RP + + + D++GPFEQ
Sbjct: 588 EGTHGLPLDLEIGYVPPSNQGQYPGLYIFGGHSRMMRPTKYLPL-----DKQDIVGPFEQ 642
Query: 476 VFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
V+M+I P+ + TH E PT +LS++AN TP+SD NQSPRNMYQCQM K
Sbjct: 643 VYMDIAVTPPE------IENNVHTHVEFSPTNVLSILANLTPFSDFNQSPRNMYQCQMGK 696
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + HR+D KLY LQT QTPIV+ + Y Y +D +P GTNA+VAV++YTGYDM
Sbjct: 697 QTMGTPGVALAHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYDM 756
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF---RKSNIE--KSKLDSD 648
+DAMI+NKS+ ERG +G +Y+ E VDL++ R DP ++ F S E K KLDSD
Sbjct: 757 DDAMIINKSADERGFGYGTVYKVEKVDLSQSRRRGDPITQHFGFGEDSWPESWKEKLDSD 816
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIR 706
GLP +G + +P + ++ + T SEP Y++ V + D ++ Q++ I+
Sbjct: 817 GLPIIGVKVEEGDPIVAYFDDTLGKTKVKTYHSSEPAYIEEVKLLGDDSGNQEGQQITIK 876
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
+R R P+IGDKFSSRHGQKGVCS+ WP VDMPF +G++PD+IINPHAFPSRMTI M
Sbjct: 877 YRVTRQPLIGDKFSSRHGQKGVCSRKWPQVDMPFS-ESGIQPDVIINPHAFPSRMTIGMF 935
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG ++TP+ S +D+ + D G+ LR+ G+NYHG E +Y
Sbjct: 936 VESLAGKAGALHGIAQDSTPWIFS--EDDTPA-------DYFGEQLRQAGYNYHGNEPMY 986
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEM
Sbjct: 987 SGATGEELRADIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEM 1046
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPR-REIGGLPPRK 945
ERD+L+ HG ++LL DRL CSDY +C CGS+L T +PR + + R+
Sbjct: 1047 ERDALIGHGTSFLLQDRLLNCSDYTQTSICRSCGSLLNTQ----TSVPRVGSVASVRCRR 1102
Query: 946 APKKVICHA----------CQTSKGME--------TVAMPYVFRYLAAEFAAMNIKMTLK 987
K H + +G + TVA+P+V +YL +E AAM IKM
Sbjct: 1103 CSSKFEAHGKNDNVNDSEIWEDGQGKKFVGGDNTTTVAIPFVLKYLDSELAAMGIKMRFN 1162
Query: 988 LN 989
++
Sbjct: 1163 VH 1164
>C6HDP1_AJECH (tr|C6HDP1) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H143) GN=HCDG_04322 PE=3 SV=1
Length = 1242
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1071 (42%), Positives = 615/1071 (57%), Gaps = 124/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R+SF++R + YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRSSFTKRGQTYTKYGIQIRSVRTDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L +G + V DR +++ + L+ R
Sbjct: 275 MILKALVETNDREIFERLVG------REGSEGIKNSFVTDRVELLLRTYKGYKLYGRDDT 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+P+L + D V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRPVLGMPADIPDDMVGAEFLRKVVLPHLGNQNVTESQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL++ +D R
Sbjct: 388 LYTLVAGECAPDNPDAVSNQEVLLGGSLYGMLLKERLEEWLRAFGPIARDWSFRNQNA-R 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
FS+ K+ + +R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ R
Sbjct: 447 FSDPRFEKEFLSRIVSRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVIAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHECKIATSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G + ++ D G+T L E + V LDG I+G +
Sbjct: 567 LDVSG-----------VPQVISDLGVTYESSVSL----DESVVVQLDGRILGYCSPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV+ + +P +LE+GY+P S G YPG+Y+F+ +R +RPV+ + +
Sbjct: 612 MISDTLRYWKVAGNKSLPVELEIGYIPNSNRGQYPGIYIFSQCARMMRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQSP
Sbjct: 667 DKLDYVGPFEQPFMEIACVPSDIMSG-----ISTHVEFDPTHILSIVANMTPFSDFNQSP 721
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM+KQ M +I++R D KLY LQT QTP+VRT Y Y +D +P G NA+V
Sbjct: 722 RNMYQCQMSKQAMGTPGASIEYRTDNKLYRLQTGQTPVVRTPLYNSYGLDNFPNGMNAVV 781
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FR 636
AVL+YTGYDM+DAMI+NKS+ +RG G IY+T+ L ++ SR +R F
Sbjct: 782 AVLSYTGYDMDDAMIINKSAHDRGFGWGTIYKTKIYSLDDKESRGRGKARREVSKLFGFA 841
Query: 637 KSNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKG 681
++ K + LD DGLPH+G + +P + Y TH LK K
Sbjct: 842 PGSLIKGEWRHALDEDGLPHIGARVTEGSIVAAWHTVRFDPVSNSYTNIDGQTHLLKYKD 901
Query: 682 SEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMP 739
+E Y+D V + Q ++++FR PR PVIGDKFSSRHGQKGVCSQLWP +DMP
Sbjct: 902 TEEGYIDNVRIFGSETGGDPCQAISVKFRVPRKPVIGDKFSSRHGQKGVCSQLWPAIDMP 961
Query: 740 FCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE 799
F TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR S +
Sbjct: 962 FS-ETGIQPDIIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDSTPFRFSEEHTAS--- 1017
Query: 800 KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVR 859
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKFQVR
Sbjct: 1018 ------DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKFQVR 1071
Query: 860 STGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 919
+TG V+ +T QP GEMERDSLLAHGAA+LL DRL CSD + +C C
Sbjct: 1072 TTGPVNALTGQPVKGRAKGGGIRVGEMERDSLLAHGAAFLLQDRLMNCSDTTRSWICRTC 1131
Query: 920 GSMLATS-----FIQPQK---------------LPRREIGGLPP-------RKAPKKVI- 951
GS L+T F+ P K P +G L R+ K+ +
Sbjct: 1132 GSFLSTQVAVSKFMAPSKNLAMAAVAKSSSGLGRPGGAMGALDGGAGVVRCRRCAKEAVF 1191
Query: 952 ----CHACQTSKGME--------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ +G VA+P V +YL E A M +KMT K+NN
Sbjct: 1192 DDPRAEVWEDGEGRRFVGGDDTTVVAVPGVLKYLDVELATMGVKMTFKVNN 1242
>F2QPB2_PICP7 (tr|F2QPB2) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430
/ Wegner 21-1) GN=PP7435_Chr1-1110 PE=3 SV=1
Length = 1165
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1016 (43%), Positives = 604/1016 (59%), Gaps = 83/1016 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R + YT + IR VR DQ+S T L+YL++ + F + EYL+PV
Sbjct: 194 MALIRPSFGNRGDSYTQFGIQIRAVRPDQTSQTNVLHYLKDGNVTFRFSWRKNEYLVPVP 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQLSLFT 116
++LKAL++T+D EI G VG++ + DR +++ + L +
Sbjct: 254 MILKALVETNDREIF--------------DGIVGSETSNSFLTDRLELLLRNYKHYKLVS 299
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ + L Y+G+ F+ + + S V K VL+ V VHL DN DKF LL+FM++KL++L
Sbjct: 300 KQETLAYLGDKFRVVFNATPDVSDVDVGKEVLRRIVLVHLPDNRDKFRLLLFMIRKLYAL 359
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIF 233
V G DNPD+ Q+QEVLL G L + +KEK+E++L S + +++ + +F E
Sbjct: 360 VSGDCCPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLASIRLQIQTDINRGYPVNFDEPK 419
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + F + I ++ L TG LV+ TGLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 420 YMSRVFQRI-NENIGKKLQYFLSTGNLVSQTGLDLQQVSGYTVVAEKINFYRFISHFRMV 478
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I++ + +
Sbjct: 479 HRGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIST---EESDVSK 535
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
K+ +S L + + + P++ V LDG IVG + + + +R
Sbjct: 536 VPKV-LSKLGVSANH---------VFAAGPQMCCVQLDGKIVGWCTHEQAKIVADTLRFW 585
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
KV IP DLEVG+VP S G YPGLYLF +R RPVR + L E D+IGPF
Sbjct: 586 KVEGGHGIPLDLEVGHVPPSSRGQYPGLYLFGGRARMTRPVRYLP-LDKE----DIIGPF 640
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQ ++ I P+ S +H E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 641 EQAYINIAVTPE-----EIESNVHSHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMG 695
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P GTNA+VAV++YTGYD
Sbjct: 696 KQTMGTPGVALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYD 755
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDS 647
M+DAMI+NKSS ERG +G +Y+ E +DL + + DP ++ F E K LD
Sbjct: 756 MDDAMIINKSSDERGFGYGTMYKVEVIDLADSRRKGDPITQHFGFGTDEWPESWKQNLDE 815
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNI 705
DGLP +G ++ +P + Y+ + T SEP Y++ V + D +LQ V I
Sbjct: 816 DGLPAIGTLVNEGDPIVAYYDDTLGKTKVKTYHSSEPAYIEEVKLISDDLGDSELQMVTI 875
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI M
Sbjct: 876 KYRITRQPQIGDKFSSRHGQKGVCSRKWPQIDMPFT-ETGIQPDVIINPHAFPSRMTIGM 934
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
+ES+A K G+LHG ++TP++ +D+ + D G+ L G+NYHG E +
Sbjct: 935 FVESLAGKAGALHGIAQDSTPWK--FNEDDTPA-------DFFGEQLISAGYNYHGNEPM 985
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSGV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GE
Sbjct: 986 YSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRNGGIRIGE 1045
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+L+ HG A+LL DRL CSDY +C CGS+L T P+ + I R+
Sbjct: 1046 MERDALIGHGTAFLLQDRLLNCSDYTQTSICKGCGSLLNTQTSVPRIGTKAMIHC---RR 1102
Query: 946 APKKVICHACQTSKGME-----------------TVAMPYVFRYLAAEFAAMNIKM 984
K+ T+ M+ TVA+P+V +YL +E +AM I+M
Sbjct: 1103 CSTKINDVTAGTTDDMDLWEDGQGNRYTGGNDTTTVAIPFVLKYLDSELSAMGIRM 1158
>C4QY42_PICPG (tr|C4QY42) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr1-4_0324 PE=3 SV=1
Length = 1165
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1016 (43%), Positives = 604/1016 (59%), Gaps = 83/1016 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R + YT + IR VR DQ+S T L+YL++ + F + EYL+PV
Sbjct: 194 MALIRPSFGNRGDSYTQFGIQIRAVRPDQTSQTNVLHYLKDGNVTFRFSWRKNEYLVPVP 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQLSLFT 116
++LKAL++T+D EI G VG++ + DR +++ + L +
Sbjct: 254 MILKALVETNDREIF--------------DGIVGSETSNSFLTDRLELLLRNYKHYKLVS 299
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ + L Y+G+ F+ + + S V K VL+ V VHL DN DKF LL+FM++KL++L
Sbjct: 300 KQETLAYLGDKFRVVFNATPDVSDVDVGKEVLRRIVLVHLPDNRDKFRLLLFMIRKLYAL 359
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIF 233
V G DNPD+ Q+QEVLL G L + +KEK+E++L S + +++ + +F E
Sbjct: 360 VSGDCCPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLASIRLQIQTDINRGYPVNFDEPK 419
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + F + I ++ L TG LV+ TGLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 420 YMSRVFQRI-NENIGKKLQYFLSTGNLVSQTGLDLQQVSGYTVVAEKINFYRFISHFRMV 478
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I++ + +
Sbjct: 479 HRGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIST---EESDVSK 535
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
K+ +S L + + + P++ V LDG IVG + + + +R
Sbjct: 536 VPKV-LSKLGVSANH---------VFAAGPQMCCVQLDGKIVGWCTHEQAKIVADTLRFW 585
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
KV IP DLEVG+VP S G YPGLYLF +R RPVR + L E D+IGPF
Sbjct: 586 KVEGGHGIPLDLEVGHVPPSSRGQYPGLYLFGGRARMTRPVRYLP-LDKE----DIIGPF 640
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQ ++ I P+ S +H E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 641 EQAYINIAVTPE-----EIESNVHSHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMG 695
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P GTNA+VAV++YTGYD
Sbjct: 696 KQTMGTPGVALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYD 755
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDS 647
M+DAMI+NKSS ERG +G +Y+ E +DL + + DP ++ F E K LD
Sbjct: 756 MDDAMIINKSSDERGFGYGTMYKVEVIDLADSRRKGDPITQHFGFGTDEWPESWKQNLDE 815
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNI 705
DGLP +G ++ +P + Y+ + T SEP Y++ V + D +LQ V I
Sbjct: 816 DGLPAIGTLVNEGDPIVAYYDDTLGKTKVKTYHSSEPAYIEEVKLISDDLGDSELQMVTI 875
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI M
Sbjct: 876 KYRITRQPQIGDKFSSRHGQKGVCSRKWPQIDMPFT-ETGIQPDVIINPHAFPSRMTIGM 934
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
+ES+A K G+LHG ++TP++ +D+ + D G+ L G+NYHG E +
Sbjct: 935 FVESLAGKAGALHGIAQDSTPWK--FNEDDTPA-------DFFGEQLISAGYNYHGNEPM 985
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSGV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GE
Sbjct: 986 YSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRNGGIRIGE 1045
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+L+ HG A+LL DRL CSDY +C CGS+L T P+ + I R+
Sbjct: 1046 MERDALIGHGTAFLLQDRLLNCSDYTQTSICKGCGSLLNTQTSVPRIGTKAMIHC---RR 1102
Query: 946 APKKVICHACQTSKGME-----------------TVAMPYVFRYLAAEFAAMNIKM 984
K+ T+ M+ TVA+P+V +YL +E +AM I+M
Sbjct: 1103 CSTKINDVTAGTTDDMDLWEDGQGNRYTGGNDTTTVAIPFVLKYLDSELSAMGIRM 1158
>Q6P9Q2_MOUSE (tr|Q6P9Q2) DNA-directed RNA polymerase OS=Mus musculus GN=Polr1b
PE=2 SV=1
Length = 1135
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1008 (44%), Positives = 596/1008 (59%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V +RCVR + S++ + L+Y+ N + L F + + LP+G
Sbjct: 191 IAMVRPKWKSRGLGYTQFGVSMRCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L K + + V R++IEE ++ Q
Sbjct: 251 FALKALVSFSDYQIFQELIK------GKEEDSFFRNSVSQMLRIVIEE----GCHSQKQV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTV--AKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
LNY+GE F+ L+ D Y V A+ +L + +HL N DKF LL M +KLF+L
Sbjct: 301 LNYLGECFRVKLS--LPDWYPNVEAAEFLLNQCICIHLQSNTDKFYLLCLMTRKLFALAR 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-------E 231
G + DNPDSL NQEV PG L ++LKEK+E+WL S K + +++ + S +
Sbjct: 359 GECMDDNPDSLVNQEVFSPGQLFLMFLKEKMENWLVSIKIVLDKRAQKANVSINNENLMK 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF + ++ E +L TG L + TGL Q +G V AD+LN+LR+LSHFR
Sbjct: 419 IFSM--------GTELTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFLRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA+FA +RTTTVR+LLPESWGFLCPVHTPDG PCGLLNH+T C + + F SI
Sbjct: 471 CVHRGAAFAKMRTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLTAVCEVVTKFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAH 409
+L G+T P P P + VLLDG +VG + ++
Sbjct: 531 PA----------LLCGLGVT---PVDTAPCRPYSDCYPVLLDGVMVGWVDKDLAPEVADT 577
Query: 410 IRELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 578 LRRFKVLREKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGREE----- 632
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
LIG EQ+FM + + G S TH+E+ P +LSV+AN P+SDHNQSPRNMYQ
Sbjct: 633 LIGTMEQLFMNVAIFEDEVFGGIS----THQELFPHSLLSVIANFIPFSDHNQSPRNMYQ 688
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q+R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++Y
Sbjct: 689 CQMGKQTMGFPLLTYQNRSDNKLYRLQTPQSPLVRPCMYDFYDMDNYPIGTNAIVAVISY 748
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLD 646
TGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + + + K + KLD
Sbjct: 749 TGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKFKQGEDNLVFGVKPGDPRVMQKLD 808
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G + +PY S N +T + K E VD + V D+ + K + +
Sbjct: 809 DDGLPFIGAKLEYGDPYYSYLNLNTGEGFVVYYKSKENCVVDNIKVCSNDMGSGK-FKCI 867
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 868 CITVRIPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMMPDILFNPHGFPSRMTI 926
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E
Sbjct: 927 GMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTE 977
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 978 RLYSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPLGGRNVQGGIRF 1037
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A +C CGS+L+ +P PP
Sbjct: 1038 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHMCVECGSLLSPLLEKP-----------PP 1086
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1087 SWSAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>G3RCD9_GORGO (tr|G3RCD9) DNA-directed RNA polymerase OS=Gorilla gorilla gorilla
GN=POLR1B PE=3 SV=1
Length = 1137
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1013 (44%), Positives = 590/1013 (58%), Gaps = 92/1013 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE WL S K +K+ T +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMR 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF + ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IFAM--------GIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGI 574
Query: 407 VAHIRELK--VSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
+R K V IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E
Sbjct: 575 ADSLRHFKKQVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE 634
Query: 464 NKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
LIG EQ+FM + + + TH+E+ P +LSV+AN P+SDHNQSP
Sbjct: 635 -----LIGTMEQIFMNVAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSP 685
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIV
Sbjct: 686 RNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIV 745
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK- 642
AV++YTGYDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K +
Sbjct: 746 AVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDTSLVFGIKPGDPRV 805
Query: 643 -SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKK 698
KLD DGLP +G ++ +PY S N +T + + K E VD + V D + K
Sbjct: 806 LQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK 865
Query: 699 DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FP
Sbjct: 866 -FKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFP 923
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N
Sbjct: 924 SRMTIGMLIESMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYN 974
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
++G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 975 FYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQ 1034
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1035 GGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-------- 1086
Query: 939 GGLPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1087 ---PPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1136
>M3D561_9PEZI (tr|M3D561) DNA-directed RNA polymerase OS=Mycosphaerella populorum
SO2202 GN=SEPMUDRAFT_149523 PE=3 SV=1
Length = 1204
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/1038 (42%), Positives = 611/1038 (58%), Gaps = 87/1038 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R Y+ V IR VR DQ+S T L+YL + + F + EYL+P
Sbjct: 202 MAIIRPSFVNRGTAYSKFGVQIRSVRPDQTSQTNVLHYLNDGTLTFRFSWRKNEYLIPAV 261
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+V+KAL +T+D EI + GK Q V DR +++ + ++ T+ +C
Sbjct: 262 MVMKALAETNDREIFEGIVGPAG-----GKDMDTKQFVIDRVELLLRTFKPYNMHTKAKC 316
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD-------DNFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + V +L+ V HL ++ DKF +L+FM +KL
Sbjct: 317 RAYLGEKFRPVLGLPDDISNEDVGTELLRRIVLPHLGSYDVTEANDMDKFRMLLFMTRKL 376
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIF 233
++LV+G +DNPD++QNQE+LLPGHL + +KE++E+WL + G + F
Sbjct: 377 YALVEGECAVDNPDAVQNQEILLPGHLYGMIVKERIEEWLTTAVRTQLSIWGAQNQYPSF 436
Query: 234 VVKKCFDKTPARAISTSIENM-------LKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
+ K+ + I + EN+ + TG LV+ +GLDLQQ +G+TV A+++N+ RF
Sbjct: 437 LSKEFERDFMTKVIRKTNENLGQGLDYFMSTGNLVSPSGLDLQQVSGFTVVAEKINFYRF 496
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I TS
Sbjct: 497 ISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIATSSA 556
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D+ + D++ G+T L + +TV L+G I+G + +
Sbjct: 557 DT-----------THLPDVIAQLGVTSTSEASL----NDSVTVQLNGRILGYCSPKQAKV 601
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV + +P DLE+GYVPLS GG YPG+Y+F+ +R +RPV+ + + +
Sbjct: 602 IHDTLRYWKVEGTHNVPLDLEIGYVPLSAGGQYPGVYMFSEAARMIRPVKYLPL-----E 656
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
+D IGPFEQ +M I C + +S ++H E T +LS+VAN+TP+S+ NQSPRN
Sbjct: 657 KLDHIGPFEQPYMSIACTEP----EIASGDSSHVEFDVTNILSIVANQTPFSNFNQSPRN 712
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQTM +++R D K Y LQT QTP+VRT + +Y +D +P GTNA+VAV
Sbjct: 713 MYQCQMGKQTMGTPGTALKYRTDNKSYRLQTGQTPVVRTPKHNEYGLDNFPNGTNAVVAV 772
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTE-QGSRSDPSSRMFRKS------ 638
++YTGYDM+DAMILNKS+ ERG +G IY+ + VDL E +G R + +F +
Sbjct: 773 ISYTGYDMDDAMILNKSAHERGFGYGTIYKAKKVDLNEDKGRRGAQVTSVFGFAPGGLIK 832
Query: 639 NIEKSKLDSDGLPHVGQMIRP-----------DEPYCSIYNASTSSTHTLKKKGSEPVYV 687
++ LD DGLP VG +R +P+ Y TH + K +E YV
Sbjct: 833 AQWRATLDDDGLPAVGTKVREGDAIAAHYSVTKDPHTGEYENKDGVTHIHRYKDAEEAYV 892
Query: 688 DYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTT 744
+ V + ++ N + Q V+IRFR PR+PVIGDKFSSRHGQKGV SQ WP DMPF +
Sbjct: 893 EEVKIIGNELGNGEPFQAVSIRFRIPRSPVIGDKFSSRHGQKGVMSQKWPTTDMPFS-ES 951
Query: 745 GMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLL 804
GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG + TPF+ K GE+
Sbjct: 952 GMQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDCTPFK--FKDKEGETA----- 1004
Query: 805 LDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTV 864
++ G L+ G+NY+G E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQVR+TG V
Sbjct: 1005 VEYFGHQLQRAGYNYYGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKFQVRTTGPV 1064
Query: 865 DQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLA 924
+T QP GEMERD+L+AHG ++LL DRL CSDY A +C CGS L+
Sbjct: 1065 TPLTGQPIKGRAKGGGIRVGEMERDALIAHGTSFLLQDRLMNCSDYTKAHICKKCGSFLS 1124
Query: 925 TSFIQPQKLPRREIGGLP-----PRKAPKKVICHACQTSKGME---------TVAMPYVF 970
Q RR GG RKA + C + E VA+P V
Sbjct: 1125 VQPSSGQFGTRRREGGRVRCRRCSRKASQTDATSLCWVDRKGEKWCGGDEVTVVAIPGVL 1184
Query: 971 RYLAAEFAAMNIKMTLKL 988
+YL E AAM I+M +
Sbjct: 1185 KYLDVELAAMGIRMKFDV 1202
>F0UUG6_AJEC8 (tr|F0UUG6) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H88) GN=HCEG_08758 PE=3 SV=1
Length = 1242
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/1071 (42%), Positives = 615/1071 (57%), Gaps = 124/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R+SF++R + YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRSSFTKRGQTYTKYGIQIRSVRTDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L +G + V DR +++ + L+ R
Sbjct: 275 MILKALVETNDREIFERLVG------REGSEGIKNSFVTDRVELLLRTYKGYKLYGRDDT 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+P+L + D V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRPVLGMPADIPDDMVGAEFLRKVVLPHLGNQNVTESQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL++ +D R
Sbjct: 388 LYTLVAGECAPDNPDAVSNQEVLLGGSLYGMLLKERLEEWLRAFGPIARDWSFRNQNA-R 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
FS+ K+ + +R I ++E L TG LV+ TGLDLQQ +GYT+ A+++N+ R
Sbjct: 447 FSDPRFEKEFLSRIVSRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTIIAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHECKIATSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G + ++ D G+T L E + V LDG I+G +
Sbjct: 567 LDVSG-----------VPQVISDLGVTYESSVSL----DESVVVQLDGRILGYCSPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV+ + +P +LE+GY+P S G YPG+Y+F+ +R +RPV+ + +
Sbjct: 612 MISDTLRYWKVAGNKSLPVELEIGYIPNSNRGQYPGIYIFSQCARMMRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQSP
Sbjct: 667 DKLDYVGPFEQPFMEIACVPSDIMSG-----ISTHVEFDPTHILSIVANMTPFSDFNQSP 721
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM+KQ M +I++R D KLY LQT QTP+VRT Y Y +D +P G NA+V
Sbjct: 722 RNMYQCQMSKQAMGTPGASIEYRTDNKLYRLQTGQTPVVRTPLYNSYGLDNFPNGMNAVV 781
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FR 636
AVL+YTGYDM+DAMI+NKS+ +RG G IY+T+ L ++ SR +R F
Sbjct: 782 AVLSYTGYDMDDAMIINKSAHDRGFGWGTIYKTKIYSLDDKESRGRGKARREVSKLFGFA 841
Query: 637 KSNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKG 681
++ K + LD DGLPH+G + +P + Y TH LK K
Sbjct: 842 PGSLIKGEWRHALDEDGLPHIGARVTEGSIVAAWHTVRFDPVSNSYTNIDGQTHLLKYKD 901
Query: 682 SEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMP 739
+E Y+D V + Q ++++FR PR PVIGDKFSSRHGQKGVCSQLWP +DMP
Sbjct: 902 TEEGYIDNVRIFGSETGGDPCQAISVKFRVPRKPVIGDKFSSRHGQKGVCSQLWPAIDMP 961
Query: 740 FCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE 799
F TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR S +
Sbjct: 962 FS-ETGIQPDIIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDSTPFRFSEEHTAS--- 1017
Query: 800 KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVR 859
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKFQVR
Sbjct: 1018 ------DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKFQVR 1071
Query: 860 STGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 919
+TG V+ +T QP GEMERDSLLAHGAA+LL DRL CSD + +C C
Sbjct: 1072 TTGPVNALTGQPVKGRAKGGGIRVGEMERDSLLAHGAAFLLQDRLMNCSDTTRSWICRTC 1131
Query: 920 GSMLATS-----FIQPQK---------------LPRREIGGLPP-------RKAPKKVI- 951
GS L+T F+ P K P +G L R+ K+ +
Sbjct: 1132 GSFLSTQVAVSKFMAPSKNLAMAAVAKSSSGLGRPGGAMGALDGGAGVVRCRRCAKEAVF 1191
Query: 952 ----CHACQTSKGME--------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ +G VA+P V +YL E A M +KMT K+NN
Sbjct: 1192 DDPRAEVWEDGEGRRFVGGDDTTVVAVPGVLKYLDVELATMGVKMTFKVNN 1242
>M3W8Y9_FELCA (tr|M3W8Y9) DNA-directed RNA polymerase OS=Felis catus GN=POLR1B PE=3
SV=1
Length = 1050
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/1000 (44%), Positives = 588/1000 (58%), Gaps = 68/1000 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 106 IAMVRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 165
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL++ SD +I L K + + + R+++EE T+ Q
Sbjct: 166 FALKALVNFSDYQIFQELIK------GKEEDSFFRNSISQMLRIVMEE----GCSTQKQV 215
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L+ + A+ + + +HL + +KF +L M +KLF+L G
Sbjct: 216 LNYLGECFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSSTEKFYMLCLMTRKLFALAKGE 275
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ +NPDSL NQEVL PG L ++LKEK+E WL S K + +++ + S + K F
Sbjct: 276 CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKRAQKANVSINTENLMKIF 335
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA F
Sbjct: 336 SM--GTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADF 393
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 394 AKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPA------ 447
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+L G+T P P P E VLLDG +VG + + +R KV
Sbjct: 448 ----LLCSLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKDLAPGVADSLRHFKVLR 500
Query: 418 SAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E LIG EQ+
Sbjct: 501 EKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LIGTMEQI 555
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
FM I + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQTM
Sbjct: 556 FMNIAIFED----EVLAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTM 611
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDMEDA
Sbjct: 612 GFPLLTYQARSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDA 671
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVG 654
MI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD DGLP +G
Sbjct: 672 MIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRVLQKLDDDGLPFIG 731
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPR 711
++ +PY N +T + K E VD + V D + K + + I R PR
Sbjct: 732 AQLKYGDPYYGYLNLNTGENFVIYYKSKENCIVDNIKVCSNDTGSGK-FKCICITMRVPR 790
Query: 712 NPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVA 771
NP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A
Sbjct: 791 NPTIGDKFASRHGQKGILSRLWPAEDMPF-SESGMVPDILFNPHGFPSRMTIGMLIESMA 849
Query: 772 AKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYG 831
K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG+ G
Sbjct: 850 GKSAALHGLCHDATPFTFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGISG 900
Query: 832 KELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSL 891
EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+L
Sbjct: 901 IELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDAL 960
Query: 892 LAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---K 948
LAHG ++LLHDRL CSD +A VC CGS+L+ +P PP + +
Sbjct: 961 LAHGTSFLLHDRLFNCSDRSVAHVCVECGSLLSPLLEKP-----------PPSWSAMRNR 1009
Query: 949 KVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1010 KYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1049
>M7X373_RHOTO (tr|M7X373) DNA-directed RNA polymerase I subunit RPA2
OS=Rhodosporidium toruloides NP11 GN=RHTO_04931 PE=4 SV=1
Length = 1235
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1047 (42%), Positives = 604/1047 (57%), Gaps = 110/1047 (10%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +R SF+ R YT V +R VR DQ+S T L+YL N A L F + EY++PV +
Sbjct: 234 SIIRPSFANRGVAYTQYGVAVRSVRPDQTSQTNTLHYLSNGGATLRFSWRKAEYMVPVVM 293
Query: 62 VLKALIDTSDLEIRTN-LKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+LKAL +D EI L+ + + V DR +++ + +L+T+ QC
Sbjct: 294 ILKALTGATDKEIFLGILQKDFENTF-----------VTDRVELLLRGFKTYNLYTKAQC 342
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L ++G+ F+ +L ++ + + V + ++ V HL D DK +L FML+KL++LV G
Sbjct: 343 LEFLGDKFRVVLGCPEDWTDERVGQHLIDTIVLPHLKDPRDKLRMLFFMLRKLYALVGGE 402
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM----KRKSGTFDFSEIFVVK 236
DNPDS Q+QE+L+PG L + +KEKL++ L + +M +R+ D ++ ++
Sbjct: 403 CCADNPDSPQHQEILMPGFLYGMIVKEKLDELLNGIRMQMLQDIRRQIPGTDLTDPKYIQ 462
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K + A I + L TG LV+ +GLDLQQ +GYT+ ++LN+ R+++HFR+VHRG
Sbjct: 463 KTISRVNAD-IGGKLAYFLATGNLVSPSGLDLQQASGYTIVGEKLNFTRYIAHFRSVHRG 521
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH CR+ + +
Sbjct: 522 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHKCRL---------VHQHLN 572
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEV-----LTVLLDGCIVGCIPSGEVEKIVAHIR 411
+ I +L GM Q P P + + V LDG I+G +++ +R
Sbjct: 573 VD-HIPALLSSLGMLQ-------PLDPSIDSRKHVVVQLDGRIIGWATPVLAKQLADTLR 624
Query: 412 ELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
K +P DLE+G VPLS GG YPGLYLF S +R +R V+ ++ N D +G
Sbjct: 625 LWKTEGQHDVPLDLEIGLVPLSKGGQYPGLYLFASRARMMRDVKYLA-----NGKTDSVG 679
Query: 472 PFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
PFEQV+++I C TH E PT +LS++AN TP+SD+NQSPRNMYQCQM
Sbjct: 680 PFEQVYLDIACMQE----EVEQGLTTHIEFSPTHVLSLLANLTPFSDYNQSPRNMYQCQM 735
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
+KQTM S +Q R D KLY LQ+ QTPIVR + Y +D YP GTNAIVAV++YTGY
Sbjct: 736 SKQTMGTPSTALQRRTDNKLYRLQSGQTPIVRPDLHNTYGMDGYPNGTNAIVAVISYTGY 795
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLT----EQGSRSDPSSRM-----FRKSNIEK 642
DMEDAMILNKS+ ERG HG IY++ VDL ++GS P R N +
Sbjct: 796 DMEDAMILNKSAHERGFAHGSIYKSHIVDLKTVRGDKGSGGHPEVHFGVGPDIRPDNEKF 855
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDL 700
S +D DGLP VG ++ + + Y+ + T K KG E Y+D V + D +
Sbjct: 856 STVDKDGLPLVGMRVKTGDVIAAYYDRTAGKTRVEKYKGDEVAYIDEVRLIGDDTSDATA 915
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
+K++I+ R PR+PVIGDKFSSRHGQKGVCSQ +P VDMPF +GM+PD+IINPHAFPSR
Sbjct: 916 KKLHIKLRVPRSPVIGDKFSSRHGQKGVCSQKYPAVDMPFT-ESGMQPDVIINPHAFPSR 974
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI M +ES+AAK G+LHG + TPF S + L+ G LR+ G+NY+
Sbjct: 975 MTIGMFVESIAAKAGALHGLAQDGTPFNFS---------EDDTPLEYFGDQLRKAGYNYY 1025
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E +YSG+ G+E +I+IG VYYQRLRHMV DK+QVR+TG +DQVTRQP
Sbjct: 1026 GNEPMYSGITGEEFHADIYIGVVYYQRLRHMVGDKWQVRTTGPLDQVTRQPVKGRKRGGG 1085
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG- 939
FGEMERD+LLAHG ++LL DRL CSDY A VC CGSM++ + Q G
Sbjct: 1086 IRFGEMERDALLAHGTSFLLQDRLMNCSDYSTAWVCRECGSMISLGYDQVTLAQSLHAGA 1145
Query: 940 ----GLPPRKAPKKVICHACQTS----------------------------------KG- 960
GL P C C+ KG
Sbjct: 1146 SDRPGLELAAGPGGEYCRVCRDKAIEEYEAEQEQAKAAKKQKKVEETGMTFERDVKVKGG 1205
Query: 961 -METVAMPYVFRYLAAEFAAMNIKMTL 986
++ VA+P+VFR L AE AAM I++ +
Sbjct: 1206 DLDVVAVPFVFRLLVAELAAMGIQVAV 1232
>G8Y0M0_PICSO (tr|G8Y0M0) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_004858 PE=3 SV=1
Length = 1167
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1025 (42%), Positives = 612/1025 (59%), Gaps = 99/1025 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT V IRCVR DQ+S T L+YL + + F + EYL+PV
Sbjct: 194 MAIIRPSFANRGAAYTKFGVQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGA-VGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL++T+D EI ++ GA + + DR ++++ +Q +L+T+ +
Sbjct: 254 MVLKALVETNDREI-----------FDGIVGADISNSFLTDRLELLLKTFKQYNLYTKKE 302
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+G F+ + + S V + V++ V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 303 TLAYLGNKFRVVFGSTPDVSDIEVGEEVIRRIVLVHLPNNEDKFRMLLFMIRKLYSLVAG 362
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVK 236
DNPD+ Q+QE+LL G L + +KEK+E++LQS + +++ + +F + +
Sbjct: 363 DCCPDNPDATQHQEILLGGFLYGMIIKEKIEEYLQSIRLQIQSDINRGIAVNFKDRKYMS 422
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 423 RVFMRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 481
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C++ + S D K
Sbjct: 482 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKVAT------SAVDVSK 535
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELKV 415
+ ++ ++ V P P + + LDG I+G + E KIVA +R KV
Sbjct: 536 VPAALAELGVS-------PAHSYAAGPGLCCIQLDGRIIGWC-THEQGKIVADTLRFWKV 587
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ +P +LE+GYVP + G YPGLYLF SR +RP + + + +D++GPFEQ
Sbjct: 588 EGTHGVPLELEIGYVPPTHKGQYPGLYLFGGHSRMMRPTKYLPL-----DKVDIVGPFEQ 642
Query: 476 VFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V++++ P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQMAKQ
Sbjct: 643 VYLDVAVTPEEIENNIHS-----HVEYAPTNILSILANLTPFSDFNQSPRNMYQCQMAKQ 697
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM+
Sbjct: 698 TMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDMD 757
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDG 649
DAMI+NKS+ ERG +G +Y+ E +DL+ R DP ++ F E K KLD+DG
Sbjct: 758 DAMIINKSADERGFGYGTVYKVEKIDLSSSRRRGDPITQHFGFGTDEWPEGWKEKLDADG 817
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRF 707
LP +G + +P + Y+ + T SE Y++ V + D + Q+ I++
Sbjct: 818 LPLIGTRVEEGDPIIAYYDDTLGRTKVKTYHSSEMAYIEEVKLLGDDGGDHECQQATIKY 877
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R PR P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M +
Sbjct: 878 RVPRAPLIGDKFSSRHGQKGVCSRKWPQIDMPFS-ESGMQPDVIINPHAFPSRMTIGMFV 936
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K G+LHG ++TP++ + +S D G L + G+NYHG E +YS
Sbjct: 937 ESLAGKAGALHGIAQDSTPWKFN---------ESDTPADFFGDQLLKAGYNYHGNEPMYS 987
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
GV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEME
Sbjct: 988 GVTGEELRADIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEME 1047
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+L+ HG+++LL DRL SDY + +C CGS+L T +P +
Sbjct: 1048 RDALIGHGSSFLLQDRLLNSSDYTQSPICRSCGSLLNTQM------------SVPRVGSA 1095
Query: 948 KKVICHACQ------TSKG----------------------METVAMPYVFRYLAAEFAA 979
V C C T KG + TVA+P+V +YL +E AA
Sbjct: 1096 ASVRCRRCSKKLEYYTQKGQYVNDSDIWEDGEGNKFVGGDDITTVAIPFVLKYLDSELAA 1155
Query: 980 MNIKM 984
MNIKM
Sbjct: 1156 MNIKM 1160
>G3B1A4_CANTC (tr|G3B1A4) DNA-directed RNA polymerase OS=Candida tenuis (strain
ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315
/ NRRL Y-1498 / VKM Y-70) GN=CANTEDRAFT_104063 PE=3 SV=1
Length = 1166
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1021 (44%), Positives = 608/1021 (59%), Gaps = 93/1021 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT + IRCVR DQ+S T L+YL + + F K EYL+PV
Sbjct: 195 MALIRPSFASRGNSYTKYGIQIRCVRPDQTSQTNVLHYLSDGNVTFRFSWKKNEYLVPVQ 254
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEV-RQLSLF 115
++LKAL++TSD EI G +GT + DR +++ + +L+
Sbjct: 255 MILKALMETSDREIF--------------DGIIGTDLSNSFLTDRLELLLRTYNKSYNLY 300
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFS 175
+ + L Y+G+ F+ + + S V K VLK V VHLD N DKF +L+FM++KL+S
Sbjct: 301 SNQETLAYLGDKFRVVFDGTPDMSDIEVGKLVLKRIVLVHLDSNQDKFRMLLFMIRKLYS 360
Query: 176 LVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEI 232
LV G DNPD+ Q+QEVLL G L + +KEK+E++L + K ++ + +F E
Sbjct: 361 LVAGDCCPDNPDATQHQEVLLGGFLYGMIVKEKIEEYLNNFKLQVSSDLNRGLKVNFHER 420
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
+ + F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR
Sbjct: 421 KYISRVFQRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRM 479
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITS-YFDSQGSI 351
VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+IT+ D G
Sbjct: 480 VHRGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKITTKQSDVSGVP 539
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-I 410
++ IS ++ P V V LDG I+G S E KIVA +
Sbjct: 540 GALSQLGISSVNSFA--------------AGPGVCCVQLDGKILGWT-SHEKAKIVADTL 584
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
R K+ S IP DLEVGYVP S G YPGLYLF +R VRPV+ + + D++
Sbjct: 585 RYWKIEGSHNIPLDLEVGYVPPSNKGQYPGLYLFGGHARMVRPVKYLPL-----GKTDIV 639
Query: 471 GPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
GPFEQV+M I P+ ++ +H E PT +LS++AN TP+SD NQSPRNMYQC
Sbjct: 640 GPFEQVYMNIAVTPE-----EITNNIHSHVEFSPTNILSILANLTPFSDFNQSPRNMYQC 694
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QM KQTM + HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV++YT
Sbjct: 695 QMGKQTMGTPGVGLVHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYT 754
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSN-----IEKSK 644
GYDM+DAMI+NKS+ ERG +G +Y+ E VDL R DP ++ + I ++K
Sbjct: 755 GYDMDDAMIINKSADERGFGYGTVYKVEKVDLGMSRRRGDPITQHIGFGDDDWPEIWQNK 814
Query: 645 LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKN-KKDLQKV 703
LD+DGLP +G + +P + ++ + T SEP Y++ V + + + Q++
Sbjct: 815 LDADGLPQIGVKVEEGDPIIAYFDDTLGKTKVKTYHSSEPAYIEEVKLLADDTNSECQQL 874
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
+I++R R P+IGDKFSSRHGQKGVCS+ WP DMPF TG++PD+IINPHAFPSRMTI
Sbjct: 875 SIKYRITRQPLIGDKFSSRHGQKGVCSRKWPQTDMPFS-ETGIQPDVIINPHAFPSRMTI 933
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
M +ES+A K G+LHG +ATP++ S ES+ D G L G+NYHG E
Sbjct: 934 GMFVESLAGKAGALHGMAHDATPWKFS------ESDTPA---DYFGDQLLAAGYNYHGNE 984
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
+YSGV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 985 PMYSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRV 1044
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+L+ HG A+LL DRL CSDY +C CGS+L T +PR IG +
Sbjct: 1045 GEMERDALIGHGTAFLLQDRLLNCSDYTHTSLCKDCGSLLTTQ----ASVPR--IGSMSS 1098
Query: 944 ---RKAPKKV------------ICHACQTSK-----GMETVAMPYVFRYLAAEFAAMNIK 983
R KK+ I Q K TVA+P+V +YL +E AAM IK
Sbjct: 1099 IRCRSCSKKLESFSNEFINESDIWEDGQGKKFVGGENTTTVAIPFVLKYLDSELAAMGIK 1158
Query: 984 M 984
+
Sbjct: 1159 L 1159
>H3AM97_LATCH (tr|H3AM97) DNA-directed RNA polymerase OS=Latimeria chalumnae PE=3
SV=1
Length = 1135
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/1008 (43%), Positives = 594/1008 (58%), Gaps = 84/1008 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT +++ CVR + +++ + L+YL N + L F + + +P+G
Sbjct: 191 IAMVRPKWKSRGPGYTQYGIMMHCVRDEHTAINMNLHYLENGTVMLNFIYQKELFFIPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LK L+D +D +I L E + V R+++E+ T+
Sbjct: 251 FALKGLVDFTDYQIYQELIQGREEN------SFYKNCVSQMLRVVLED----GCTTKKAV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+GE F+ L + + VA+ + + +HL N +KF+LL F+ +KLF+ V
Sbjct: 301 LKYLGERFRVKLAVPDWYTDEQVAEFLFNQCLCIHLKSNVEKFHLLCFITRKLFAFVKEE 360
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSEIF 233
+ +NPDSL QEVL PG L ++LKEK+E+WLQS K + +K+ T + ++IF
Sbjct: 361 CMEENPDSLMCQEVLTPGRLYLMFLKEKMENWLQSVKISLDKKAQKTNLTISTENLTKIF 420
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ ++ E +L TG L + +GL + Q +G V AD+LN++R+LSHFR V
Sbjct: 421 SM--------GADLTRPFEYLLATGNLRSKSGLGMLQDSGLCVVADKLNFIRYLSHFRCV 472
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRGA FA +RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT TC I + Q S+
Sbjct: 473 HRGAVFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTATCEIVT----QPSLTV 528
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIR 411
+ L + G P P + V+LDG +VG + + +R
Sbjct: 529 LLPPLLCSLGVTAVDGT---------PSQPYSDCYPVVLDGAVVGWVERDLASSVTESLR 579
Query: 412 ELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
KV IP EV +P++ YPGL++FT+P R +RPVRN+S+ E LI
Sbjct: 580 TFKVLQQQKIPPWTEVVLIPMTGKPSIYPGLFIFTTPCRMMRPVRNLSLGKEE-----LI 634
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
G EQ++M+I +G P TH+E+ P MLSVVAN P+SDHNQSPRNMYQ
Sbjct: 635 GTLEQLYMDIAIFEG------EIVPEITTHQELFPHSMLSVVANFIPFSDHNQSPRNMYQ 688
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM F T Q R+D KLY LQTPQ+P+VR Y YN+D YP GTNAIVAV++Y
Sbjct: 689 CQMGKQTMGFPLHTYQERSDNKLYRLQTPQSPLVRPYMYDYYNMDNYPIGTNAIVAVISY 748
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLD 646
TGYDMEDAMI+NKSS ERG HG +Y+TE ++L E+ + D + K +++ KLD
Sbjct: 749 TGYDMEDAMIVNKSSWERGFAHGTVYKTELINLDEKIKQGDDNLVFGAKPGDKRTMQKLD 808
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKV 703
DGLP +G +++ +P+ S N +T + + K E VD + + D K + +
Sbjct: 809 DDGLPPIGSILQYGDPFYSYVNLNTGDSFVMYYKSKESCVVDNIKICGNDTGTGK-FKCI 867
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI
Sbjct: 868 CITMRIPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTI 926
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
ML+ES+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E
Sbjct: 927 GMLIESMAGKSAALHGLCHDATPFTFS-------EENSA--LEHFGEMLKAAGYNFYGTE 977
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP F
Sbjct: 978 RLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNIQGGIRF 1037
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 1038 GEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVQCGSLLSPLLEKP-----------PP 1086
Query: 944 RKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C + ++ +++PYVFRY AE AAMNIK+ L +
Sbjct: 1087 SWSSIRHRKHHCTICNQTDTIDVISVPYVFRYFVAELAAMNIKVKLDI 1134
>K0KHS6_WICCF (tr|K0KHS6) DNA-directed RNA polymerase OS=Wickerhamomyces ciferrii
(strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC
0793 / NRRL Y-1031) GN=BN7_473 PE=3 SV=1
Length = 1171
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1024 (42%), Positives = 603/1024 (58%), Gaps = 100/1024 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + + F K EYL+PV
Sbjct: 201 MAIIRPSFTNRGASYSQFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWKKNEYLVPVM 260
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR----VDDRARMIIEEVRQLSLFT 116
++LKAL++T+D EI G VG+ + DR +++ + L +
Sbjct: 261 MILKALVETNDREIF--------------DGIVGSDLDNSFLTDRLELLLRSFKTYKLHS 306
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
+ L Y+G+ F+ + + S V K VLK V VHLD N DKF +L+FM++KL++L
Sbjct: 307 NQETLAYLGDKFRVVFNATPDVSDVEVGKEVLKRIVLVHLDSNRDKFRMLLFMIRKLYTL 366
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIF 233
V G DNPD+ Q+QEVLL G L + +KEK+E++L + + +++ + +F++
Sbjct: 367 VAGDCSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLNNIRLQIQSDINRGIAINFNDRK 426
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 427 YMSRVFMRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMV 485
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C I++ Q S D
Sbjct: 486 HRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCSIST----QAS--D 539
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
K+ ++ + V P + P V V LDG IVG + + + +R
Sbjct: 540 VSKVPEALSALGVS-------PAHVFAAGPNVACVQLDGKIVGWTTHDQAKIVADTLRFW 592
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
KV +P DLE+GYVP S G YPGLY+F SR +RPVR + + D++GPF
Sbjct: 593 KVEGKHGLPLDLEIGYVPPSAKGQYPGLYIFGGHSRMMRPVRYLPL-----DKQDIVGPF 647
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQV+M++ P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 648 EQVYMDVAVTPEEIENNVHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMG 702
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR+D KLY LQ+ QTPIV+ + Y +Y +D +P GTNA+VAV++YTGYD
Sbjct: 703 KQTMGTPGVALVHRSDNKLYRLQSGQTPIVKANLYDEYGMDNFPNGTNAVVAVISYTGYD 762
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSK-----LDS 647
M+DAMI+NKS+ ERG +G +Y+ E VDL++ R DP ++ F E K LD+
Sbjct: 763 MDDAMIINKSADERGFGYGTVYKVEKVDLSQSRRRGDPITQHFGFGTDEWPKEWRNFLDT 822
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNI 705
DGLP +G + +P + Y+ + T SE +++ V + D + Q++ I
Sbjct: 823 DGLPMIGGRVEEGDPIVAYYDETVGKTKVKTYHSSEGAFIEEVKLLGDDNGDSEFQQLTI 882
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
++R R+P+IGDKFSSRHGQKGVCS+ WP VD+PF TGM+PD+IINPHAFPSRMTI M
Sbjct: 883 KYRITRSPLIGDKFSSRHGQKGVCSRKWPTVDLPFT-ETGMQPDVIINPHAFPSRMTIGM 941
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
+ES+A K G+LHG ++TP+ S +S D G+ LR+ G+NYHG E +
Sbjct: 942 FVESLAGKAGALHGIAQDSTPWTFS---------ESDTPADYFGEQLRKSGYNYHGNEPM 992
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GE
Sbjct: 993 YSGATGEELRCDIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGE 1052
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+L+ HG A+LL DRL SDY +C CGS+LAT +PR IG
Sbjct: 1053 MERDALIGHGTAFLLQDRLLNSSDYTQTSICRGCGSLLATQ----TSVPR--IG------ 1100
Query: 946 APKKVICHACQT-------------------------SKGMETVAMPYVFRYLAAEFAAM 980
A + C C + TVA+P+V +YL +E AAM
Sbjct: 1101 AAATIRCRNCSSKFEHTSTQADESSIWEDGQGNKFVGGNNTTTVAIPFVLKYLDSELAAM 1160
Query: 981 NIKM 984
I+M
Sbjct: 1161 GIRM 1164
>F6PH26_HORSE (tr|F6PH26) DNA-directed RNA polymerase OS=Equus caballus GN=POLR1B
PE=3 SV=1
Length = 1135
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1003 (44%), Positives = 587/1003 (58%), Gaps = 74/1003 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IALTRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFVYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R++ EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFFRNSVSQMLRIVTEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGERFRVKLNLPDWYPDAQAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
G + +NPDSL NQEVL PG L ++LKEK+E WL S K + +K+ D S + K
Sbjct: 359 GECMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKKAQKTDVSINTDNLMK 418
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA
Sbjct: 419 IFNL--GTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGA 476
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F S+
Sbjct: 477 DFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFAYTASVPA---- 532
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+L G+T P P P E VLLDG +VG + I +R KV
Sbjct: 533 ------LLCSLGVT---PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPSIADSLRHFKV 583
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E LIG E
Sbjct: 584 LREKRIPPWMEVALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGREE-----LIGTME 638
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
Q+FM I D G TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM K
Sbjct: 639 QIFMNIAIFEDEVFAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGK 693
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F T + R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDM
Sbjct: 694 QTMGFPLLTYRDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDM 753
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLP 651
EDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD DGLP
Sbjct: 754 EDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRIVQKLDDDGLP 813
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFR 708
+G ++ +PY S N +T + + K E VD + V D + K + + I R
Sbjct: 814 FIGAQLQYGDPYYSYLNLNTGESFVMYYKSKENCIVDNIKVCSNDTGSGK-FKCICITMR 872
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+E
Sbjct: 873 VPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIE 931
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG
Sbjct: 932 SMAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSG 982
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMER
Sbjct: 983 ISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMER 1042
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP- 947
D+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1043 DALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAM 1091
Query: 948 --KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1092 RNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>M3HJ00_CANMA (tr|M3HJ00) DNA-directed RNA polymerase OS=Candida maltosa Xu316
GN=G210_2341 PE=3 SV=1
Length = 1126
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1018 (43%), Positives = 605/1018 (59%), Gaps = 88/1018 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 156 MAIIRPSFGNRGAAYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 215
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + +G + DR +++ + +L ++ +
Sbjct: 216 MILKALVETNDREIFDGIVG----------NDIGNSFLTDRLELLLRTYKTYNLNSQQET 265
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + + S V K VLK V VHL N DKF +L+FM++KL+SLV G
Sbjct: 266 LAYLGDKFRVVFGATPDMSDIEVGKEVLKRIVLVHLPKNADKFRMLLFMIRKLYSLVAGD 325
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK----DEMKRKSGTFDFSEIFVVK 236
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ R G +F + +
Sbjct: 326 CSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDINRGVG-INFDDRKYMT 384
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 385 RVFSRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 443
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I +
Sbjct: 444 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCKIATEASDVSQ------ 497
Query: 357 IKISILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IREL 413
V +TQL +P P + V LDG IVG + E KIVA +R
Sbjct: 498 ---------VPKALTQLGVLPADSFAAGPNLCCVQLDGKIVGWT-THEQGKIVADTLRFW 547
Query: 414 KVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
KV +P DLEVGYVP S G YPGLYLF SR +RPVR + + D++GPF
Sbjct: 548 KVQGEHGLPLDLEVGYVPPSNKGQYPGLYLFGGHSRMMRPVRYLPL-----DKQDIVGPF 602
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQV+M + P+ S +H E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 603 EQVYMNVAVTPE-----EIESNVHSHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMG 657
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYD
Sbjct: 658 KQTMGTPGTALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYD 717
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDS 647
M+DAMI+NKS+ ERG +G +Y+ E VDL++ R DP ++ F + + K KLD+
Sbjct: 718 MDDAMIINKSADERGFGYGTVYKVEKVDLSQSRRRGDPITQHFGFGSDDWPESWKEKLDA 777
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNI 705
DGLP +G + +P + Y+ T SEP Y++ V + + ++ Q++ I
Sbjct: 778 DGLPIIGVKVEEGDPILAYYDDVLGKTKIKTYHSSEPAYIEEVKLIGEETTDQEGQQLTI 837
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
++R R P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M
Sbjct: 838 KYRITRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFT-ESGMQPDVIINPHAFPSRMTIGM 896
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
+ES+A K G+LHG ++TP+ K N + + D G+ L + G+NYHG E +
Sbjct: 897 FVESLAGKAGALHGIAQDSTPW-----KFNEQDTPA----DYFGEQLLQAGYNYHGNEPM 947
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GE
Sbjct: 948 YSGATGEELRCDIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGE 1007
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+L+ HG ++LL DRL CSDY VC CGS+L T +PR IG + +
Sbjct: 1008 MERDALIGHGTSFLLQDRLLNCSDYTQTPVCRSCGSILTTQ----TSVPR--IGSMASIR 1061
Query: 946 APKKVIC-----------------HACQTSKGME--TVAMPYVFRYLAAEFAAMNIKM 984
+ + H + G + TVA+P+V +YL +E +AM IKM
Sbjct: 1062 CRRCAVTLDKYDGYAADSDIWEDGHGTKFVGGDDTTTVAIPFVLKYLDSELSAMGIKM 1119
>G8Y3K7_PICSO (tr|G8Y3K7) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_004858 PE=3 SV=1
Length = 1167
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1025 (42%), Positives = 612/1025 (59%), Gaps = 99/1025 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT V IRCVR DQ+S T L+YL + + F + EYL+PV
Sbjct: 194 MAIIRPSFANRGAAYTKFGVQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 253
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGA-VGTQRVDDRARMIIEEVRQLSLFTRLQ 119
+VLKAL++T+D EI ++ GA + + DR ++++ +Q +L T+ +
Sbjct: 254 MVLKALVETNDREI-----------FDGIVGADISNSFLTDRLELLLKTFKQYNLCTKKE 302
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
L Y+G F+ + S V + V++ V VHL +N DKF +L+FM++KL+SLV G
Sbjct: 303 TLAYLGNKFRVAFGSTPDVSDIEVGEEVIRRIVLVHLPNNEDKFRMLLFMIRKLYSLVAG 362
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVK 236
DNPD+ Q+QE+LL G L + +KEK+E++LQS + +++ + +F + +
Sbjct: 363 DCCPDNPDATQHQEILLGGFLYGMIIKEKIEEYLQSIRLQIQSDINRGIAVNFKDRKYMS 422
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
+ F + I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG
Sbjct: 423 RVFMRI-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRG 481
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C++ + G++ D K
Sbjct: 482 SFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKVAT-----GAV-DVSK 535
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRELKV 415
+ +++ ++ V P P + + LDG I+G + E KIVA +R KV
Sbjct: 536 VPVALAELGVS-------PAHSYAAGPSLCCIQLDGRIIGWC-THEQGKIVADTLRFWKV 587
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+ +P +LE+GYVP + G YPGLYLF SR +RP R + + +D++GPFEQ
Sbjct: 588 EGTHGVPLELEIGYVPPTHKGQYPGLYLFGGHSRMMRPTRYLPL-----DKVDIVGPFEQ 642
Query: 476 VFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V+++I P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQMAKQ
Sbjct: 643 VYLDIAVTPEEIENNIHS-----HVEYAPTNILSILANLTPFSDFNQSPRNMYQCQMAKQ 697
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NAIVAV++YTGYDM+
Sbjct: 698 TMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAIVAVISYTGYDMD 757
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDG 649
DAMI+NKS+ ERG +G +Y+ E +DL+ R DP ++ F E K KLD+DG
Sbjct: 758 DAMIINKSADERGFGYGTVYKVEKIDLSSSRRRGDPITQHFGFGTDEWPEGWKEKLDADG 817
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRF 707
LP +G + +P + Y+ + T SE Y++ V + D + Q+ I++
Sbjct: 818 LPLIGTRVEEGDPIIAYYDDTLGRTKVKTYHSSEMAYIEEVKLLGDDGGDHECQQATIKY 877
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R PR P+IGDKFSSRHGQKGVCS+ WP +DMPF +GM+PD+IINPHAFPSRMTI M +
Sbjct: 878 RVPRAPLIGDKFSSRHGQKGVCSRKWPQIDMPFS-ESGMQPDVIINPHAFPSRMTIGMFV 936
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K G+LHG ++TP+ + +S D G+ L G+NYHG E +YS
Sbjct: 937 ESLAGKAGALHGIAQDSTPW---------QFNESDTPADFFGEQLLNAGYNYHGNEPMYS 987
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
GV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEME
Sbjct: 988 GVTGEELRADIYIGCVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRSGGIRVGEME 1047
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+L+ HG+++LL DRL SDY + +C CGS+L T +P +
Sbjct: 1048 RDALIGHGSSFLLQDRLLNSSDYTQSPMCRSCGSLLNTQM------------SVPRVGSA 1095
Query: 948 KKVICHACQ------TSKG----------------------METVAMPYVFRYLAAEFAA 979
V C C T KG + TVA+P+V +YL +E AA
Sbjct: 1096 ASVRCRRCSKKLEYYTQKGQYVNDSDIWEDGEGNKFVGGDDITTVAIPFVLKYLDSELAA 1155
Query: 980 MNIKM 984
MNIKM
Sbjct: 1156 MNIKM 1160
>G3GZZ7_CRIGR (tr|G3GZZ7) DNA-directed RNA polymerase OS=Cricetulus griseus
GN=I79_003445 PE=3 SV=1
Length = 996
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1006 (43%), Positives = 591/1006 (58%), Gaps = 80/1006 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+Y+ N + L F + + LP+G
Sbjct: 52 IAMIRPKWKSRGLGYTHFGVSMHCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLG 111
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
VLKAL+ SD +I L K + + V R ++EE T+ Q
Sbjct: 112 FVLKALVSFSDYQIFQELIK------GKEEDSFFKNSVSQMLRTVMEE----GCSTQKQV 161
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L+ + + AK + + + +HL + +KF LL M +KLF+L G
Sbjct: 162 LNYLGERFRVKLSLPEWYPNEEAAKFLFNECICIHLKSDTEKFYLLCLMTRKLFALARGE 221
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-------EIF 233
+ DNPDSL NQEVL PG L ++LKEK+E+WL S K + +++ + S +IF
Sbjct: 222 CMEDNPDSLVNQEVLTPGQLFLMFLKEKMENWLASIKIALDKRAQKTNVSINNENLLKIF 281
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR V
Sbjct: 282 SM--------GTELTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCV 333
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRGA FA +RTTTVR+LLPESWGFLCPVHTPDG PCGLLNH+T C + + F S+
Sbjct: 334 HRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLTAICEVVTKFVYTASVPA 393
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIR 411
+L G+T P P P + VLLDG +VG + + +R
Sbjct: 394 ----------LLCGLGVT---PVDATPCRPYSDCYPVLLDGVMVGWVDKELAPDVADTLR 440
Query: 412 ELKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLI 470
KV IP +EV VP++ YPGL+LFT+P R VRPV+N+ + E LI
Sbjct: 441 RFKVLREKRIPPWMEVALVPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LI 495
Query: 471 GPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
G EQ+FM + + S +TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQ
Sbjct: 496 GTMEQLFMNVAIFED----EVFSGISTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQ 551
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTG
Sbjct: 552 MGKQTMGFPLLTFQDRSDNKLYRLQTPQSPLVRPCMYDYYSMDNYPIGTNAIVAVISYTG 611
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSD 648
YDMEDAMI+NK+S ERG HG +Y++E +DL+E+ + + + K + KLD D
Sbjct: 612 YDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKFKQGNDNLVFGIKPGDPRVMQKLDDD 671
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNI 705
GLP +G ++ +PY S N +T + K E VD + V D + K + + I
Sbjct: 672 GLPFIGAKLQFGDPYYSYLNLNTGEGFVVYYKSKENCIVDNIKVCSNDTGSGK-FKCICI 730
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI M
Sbjct: 731 TIRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGM 789
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
L+ES+A K +LHG +ATPF S E S L G+ML+ G+N++G E L
Sbjct: 790 LIESMAGKSAALHGLCHDATPFIFS-------EESSA--LGYFGEMLKAAGYNFYGTERL 840
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGE
Sbjct: 841 YSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGE 900
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 901 MERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSW 949
Query: 946 AP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 950 SAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 995
>B8JKD7_DANRE (tr|B8JKD7) Uncharacterized protein OS=Danio rerio GN=polr1b PE=2
SV=1
Length = 1132
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/996 (43%), Positives = 594/996 (59%), Gaps = 66/996 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R F R +GYT A+ +RCV+ + +++ + L+YL N + + F + + LP+G
Sbjct: 190 IAVSRPKFKSRGQGYTQYAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYRKELFFLPLG 249
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
LKAL+D SD +I L K + + K V + R+++++ T+++
Sbjct: 250 FALKALVDYSDYQIYQELIKGREDNSFYK-------SCVSEMLRIVMDQ----GCTTKIK 298
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
LNY+GE F+ L + +++ A +L + + +HL + +KF +L M +KLFS
Sbjct: 299 VLNYLGERFRVKLNLPEWFTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQ 358
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKCF 239
+ +NPDS EVL PG L ++LKEK+E WL S K +++K + K F
Sbjct: 359 ECMEENPDSPMFHEVLTPGQLYLMFLKEKMEGWLVSVKLALEKKPQRVGGLTPDSMTKLF 418
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ + E +L TG L++ TGL + Q +G V AD+LN++R+LSHFR VHRGA+F
Sbjct: 419 NM--GTDLTKAFEYLLATGNLMSKTGLGMLQNSGLCVVADKLNFIRYLSHFRCVHRGAAF 476
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF-KIK 358
A +RTTTVRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I + ++ +
Sbjct: 477 AKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEIVAPVYPTSTLPGLLCSLG 536
Query: 359 ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSS 418
++ D + P V+LDG ++G + ++ +R KV
Sbjct: 537 VNAADGNPGQAYSDCYP------------VILDGAMIGWVEKEVAPSVIESLRRFKVLGE 584
Query: 419 AMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
+P E+ VP + + YPGLYLFT+P R VR VRN+S+ E LIG FEQV+
Sbjct: 585 KKVPPWTEIVLVPQTGKASLYPGLYLFTTPCRMVRTVRNLSLGKQE-----LIGIFEQVY 639
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
+ + G TH+E+ P MLSVVA P+SDHNQSPRNMYQCQM+KQTM
Sbjct: 640 LNV----GIFEKEIEDGVTTHQELFPHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMG 695
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
F + Q+R+D KLY LQTPQ+P+VR + Y Y++D YP GTNAIVAV++YTGYDMEDAM
Sbjct: 696 FPLHSYQYRSDNKLYRLQTPQSPLVRPAMYDHYDVDNYPIGTNAIVAVISYTGYDMEDAM 755
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVGQ 655
I+NKSS ERG HG +Y+TE +DL+E+ + D S K K KLD+DGLP +G
Sbjct: 756 IVNKSSWERGFAHGSVYKTEIIDLSEK-VKGDDSIVFGVKPGDPKVMGKLDADGLPFIGS 814
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNP 713
+++ +P+ + +T +H K E VD + V + +++ + R PRNP
Sbjct: 815 VLKYGDPFYGYISLNTGQSHVYFYKYQESCVVDNIKVCSNETGTGRFKRICVTSRVPRNP 874
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K
Sbjct: 875 TIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMSPDILFNPHGFPSRMTIGMLIESMAGK 933
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
SLHG +ATPF S E S L+ G++L+ G+NY+G E LYSG+ G E
Sbjct: 934 SASLHGLCHDATPFTFS-------EENSA--LEHFGELLKAAGYNYYGTERLYSGLSGLE 984
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
L +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLA
Sbjct: 985 LEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPMGGRNVQGGIRFGEMERDALLA 1044
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKV 950
HG ++LLHDRL CSD +A VC CGS+L+ +P PP + +K
Sbjct: 1045 HGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLEKP-----------PPNWSATRHRKT 1093
Query: 951 ICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
IC C S +ETV++PYVF+Y AE AAMNIK+ L
Sbjct: 1094 ICLLCNKSDSIETVSVPYVFKYFVAELAAMNIKIKL 1129
>A2VCY0_DANRE (tr|A2VCY0) DNA-directed RNA polymerase OS=Danio rerio GN=polr1b PE=2
SV=1
Length = 1132
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/996 (43%), Positives = 594/996 (59%), Gaps = 66/996 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R F R +GYT A+ +RCV+ + +++ + L+YL N + + F + + LP+G
Sbjct: 190 IAVSRPKFKSRGQGYTQYAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYRKELFFLPLG 249
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQ 119
LKAL+D SD +I L K + + K V + R+++++ T+++
Sbjct: 250 FALKALVDYSDYQIYQELIKGREDNSFYKSC-------VSEMLRIVMDQ----GCTTKIK 298
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
LNY+GE F+ L + +++ A +L + + +HL + +KF +L M +KLFS
Sbjct: 299 VLNYLGERFRVKLNLPEWFTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQ 358
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKCF 239
+ +NPDS EVL PG L ++LKEK+E WL S K +++K + K F
Sbjct: 359 ECMEENPDSPMFHEVLTPGQLYLMFLKEKMEGWLVSVKLALEKKPQRVGGLTPDSMTKLF 418
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ + E +L TG L++ TGL + Q +G V AD+LN++R+LSHFR VHRGA+F
Sbjct: 419 NM--GTDLTKAFEYLLATGNLMSKTGLGMLQNSGLCVVADKLNFIRYLSHFRCVHRGAAF 476
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF-KIK 358
A +RTTTVRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I + ++ +
Sbjct: 477 AKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEIVAPVYPTSTLPGLLCSLG 536
Query: 359 ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSS 418
++ D + P V+LDG ++G + ++ +R KV
Sbjct: 537 VNAADGNPGQAYSDCYP------------VILDGAMIGWVEKEVAPSVIESLRRFKVLGE 584
Query: 419 AMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVF 477
+P E+ VP + + YPGLYLFT+P R VR VRN+S+ E LIG FEQV+
Sbjct: 585 KKVPPWTEIVLVPQTGKASLYPGLYLFTTPCRMVRTVRNLSLGKQE-----LIGIFEQVY 639
Query: 478 MEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMA 537
+ + G TH+E+ P MLSVVA P+SDHNQSPRNMYQCQM+KQTM
Sbjct: 640 LNV----GIFEKEIEDGVTTHQELFPHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMG 695
Query: 538 FSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM 597
F + Q+R+D KLY LQTPQ+P+VR + Y Y++D YP GTNAIVAV++YTGYDMEDAM
Sbjct: 696 FPLHSYQYRSDNKLYRLQTPQSPLVRPAMYDHYDVDNYPIGTNAIVAVISYTGYDMEDAM 755
Query: 598 ILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVGQ 655
I+NKSS ERG HG +Y+TE +DL+E+ + D S K K KLD+DGLP +G
Sbjct: 756 IVNKSSWERGFAHGSVYKTEIIDLSEK-VKGDDSIVFGVKPGDPKVMGKLDADGLPFIGS 814
Query: 656 MIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNP 713
+++ +P+ + +T +H K E VD + V + +++ + R PRNP
Sbjct: 815 VLKYGDPFYGYISLNTGQSHVYFYKYQESCVVDNIKVCSNETGTGRFKRICVTSRVPRNP 874
Query: 714 VIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 773
IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K
Sbjct: 875 TIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMSPDILFNPHGFPSRMTIGMLIESMAGK 933
Query: 774 GGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKE 833
SLHG +ATPF S E S L+ G++L+ G+NY+G E LYSG+ G E
Sbjct: 934 SASLHGLCHDATPFTFS-------EENSA--LEHFGELLKAAGYNYYGTERLYSGLSGLE 984
Query: 834 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLA 893
L +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLA
Sbjct: 985 LEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPMGGRNVQGGIRFGEMERDALLA 1044
Query: 894 HGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKV 950
HG ++LLHDRL CSD +A VC CGS+L+ +P PP + +K
Sbjct: 1045 HGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLEKP-----------PPNWSATRHRKT 1093
Query: 951 ICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
IC C S +ETV++PYVF+Y AE AAMNIK+ L
Sbjct: 1094 ICLLCNKSDSIETVSVPYVFKYFVAELAAMNIKIKL 1129
>I3MB58_SPETR (tr|I3MB58) DNA-directed RNA polymerase (Fragment) OS=Spermophilus
tridecemlineatus GN=POLR1B PE=3 SV=1
Length = 1077
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1002 (44%), Positives = 590/1002 (58%), Gaps = 72/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CV+ + S++ + L+YL N + L F + + LP+G
Sbjct: 133 IAMVRPKWKSRGPGYTQFGVSMHCVKGEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 192
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R+++EE T+
Sbjct: 193 FALKALVSFSDYQIFQELI--------KGKEDDSFFRNSVSQMLRIVMEE----GCSTQK 240
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L+ S + A+ + + +HL + +KF +L M +KLF+L
Sbjct: 241 QVLNYLGECFRVKLSLPDWYSNEQAAEFLFNQCICIHLKSSTEKFYVLCLMTRKLFALAR 300
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
G + +NPDSL NQEVL PG L ++LKEK+E WL S K + +K+ D S + K
Sbjct: 301 GECMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKKAQKTDVSINSENLMK 360
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA
Sbjct: 361 IFSM--GTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGA 418
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
+FA +RTTTVR+LLPESWGFLCPVHTPDG PCGL+NH+T TC + + S+
Sbjct: 419 AFAKMRTTTVRRLLPESWGFLCPVHTPDGAPCGLMNHLTATCEVVTQLVYTTSLPT---- 474
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+L G+T P P P E VLLDG +VG + I +R KV
Sbjct: 475 ------LLCSLGVT---PVDGAPHRPYSECYPVLLDGLMVGWVDKDLAPGIADSLRRFKV 525
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV VP++ YPGL LFT+P R VRPV+N+ + E LIG E
Sbjct: 526 LREKRIPPWMEVVLVPMTGKPSLYPGLLLFTTPCRLVRPVQNLELGQEE-----LIGTME 580
Query: 475 QVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
Q+FM I + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQ
Sbjct: 581 QLFMNIAIFED----EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQ 636
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDME
Sbjct: 637 TMGFPLLTYQDRSDNKLYRLQTPQSPLVRPCMYDYYDMDNYPIGTNAIVAVISYTGYDME 696
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGLPH 652
DAMILNK+S ERG HG +Y++E +DL+E+ + D S K ++ KLD DGLP
Sbjct: 697 DAMILNKASWERGFAHGSVYKSEFIDLSERIKQGDDSLVFGVKPGDPRTLQKLDGDGLPF 756
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRH 709
+G ++ +PY N +T + + K E VD + V D N K + V + R
Sbjct: 757 IGAALKYGDPYYGYLNLNTGESFVVFYKSKENCIVDNIKVCSNDTGNGK-FKCVCVTMRV 815
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES
Sbjct: 816 PRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIES 874
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG+
Sbjct: 875 MAGKSAALHGLCHDATPFTFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGI 925
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD
Sbjct: 926 SGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERD 985
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP-- 947
+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 986 ALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSALR 1034
Query: 948 -KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1035 NRKYNCALCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1076
>Q2UM88_ASPOR (tr|Q2UM88) DNA-directed RNA polymerase OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=AO090003000096 PE=3 SV=1
Length = 1237
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1064 (42%), Positives = 612/1064 (57%), Gaps = 116/1064 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR SF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRGSFVKRGHTYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L + + + V DR +++ + +L +R C
Sbjct: 276 MILKALVETNDREIFEGLVGSASSE------GINNTFVTDRVELLLRTYKGYNLHSRSAC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPMDMSNEEAGTEFLRKVVLPHLGNQNVTETQDYDKFKLIMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFGPILRDWSMRNHGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPSFERDFLSKVVKRSNENIGGALEYFLSTGNLVSPTGLDLQQTSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I++
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTS-- 566
Query: 347 SQGSIKDYFKIKISIL-DILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
I +S L +LV G+ L E +TV LDG IVG +
Sbjct: 567 ---------DIDVSHLPRLLVQLGVRSESSVSLE----ESVTVQLDGRIVGFCSPKQARM 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV S +P +LE+GYVP S GG YPG+Y+F+ +R R V+ + +
Sbjct: 614 IADTLRHWKVEGSHNVPRELEIGYVPNSNGGQYPGIYMFSQAARMYREVKYLPL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPSDLVAG-----ISTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM I +R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTAIDYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG HG IY+T+ L E+ SR + S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGHGTIYKTKVHSLDEKESRRNKSRREITKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDE---PYCSI-YNASTSS-------THTLKKKGSE 683
I ++ +D DGLPH+G ++ Y ++ Y+A++ S TH +K K +E
Sbjct: 844 GEIRAEWRNTIDEDGLPHIGARVKEGSLVAAYHNVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D + + + Q +++++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSIRIMGAETGIEPCQSLSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D G LR+ G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGHQLRKAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+ +T QP GEMERDSL+AHGAA++L DRL CSD A +C CGS
Sbjct: 1074 GPVNSLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDTQRAWLCRDCGS 1133
Query: 922 MLATSFIQPQKLPRREIGG------------LPPRKAPKKVI-CHACQTSK--------- 959
L+T + G L ++ C C
Sbjct: 1134 FLSTQVALAGGSGKARNQGAAAAAAKAASSQLTQASGSSGIVRCRRCAREAVFDDSRAIT 1193
Query: 960 -------------GMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V RYL E AAM I+M K++N
Sbjct: 1194 WEDGDGRRYVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFKVDN 1237
>B8N4K6_ASPFN (tr|B8N4K6) DNA-directed RNA polymerase OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=AFLA_037100 PE=3 SV=1
Length = 1237
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1064 (42%), Positives = 612/1064 (57%), Gaps = 116/1064 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR SF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRGSFVKRGHTYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L + + + V DR +++ + +L +R C
Sbjct: 276 MILKALVETNDREIFEGLVGSASSE------GINNTFVTDRVELLLRTYKGYNLHSRSAC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPMDMSNEEAGTEFLRKVVLPHLGNQNVTETQDYDKFKLIMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFGPILRDWSMRNHGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPSFERDFLSKVVKRSNENIGGALEYFLSTGNLVSPTGLDLQQTSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I++
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTS-- 566
Query: 347 SQGSIKDYFKIKISIL-DILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
I +S L +LV G+ L E +TV LDG IVG +
Sbjct: 567 ---------DIDVSHLPRLLVQLGVRSESSVSLE----ESVTVQLDGRIVGFCSPKQARM 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV S +P +LE+GYVP S GG YPG+Y+F+ +R R V+ + +
Sbjct: 614 IADTLRHWKVEGSHNVPRELEIGYVPNSNGGQYPGIYMFSQAARMYREVKYLPL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPSDLVAG-----ISTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM I +R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTAIDYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG HG IY+T+ L E+ SR + S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGHGTIYKTKVHSLDEKESRRNKSRREITKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDE---PYCSI-YNASTSS-------THTLKKKGSE 683
I ++ +D DGLPH+G ++ Y ++ Y+A++ S TH +K K +E
Sbjct: 844 GEIRAEWRNTIDEDGLPHIGARVKEGSLVAAYHNVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D + + + Q +++++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSIRIMGAETGIEPCQSLSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D G LR+ G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGHQLRKAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+ +T QP GEMERDSL+AHGAA++L DRL CSD A +C CGS
Sbjct: 1074 GPVNSLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDTQRAWLCRDCGS 1133
Query: 922 MLATSFIQPQKLPRREIGG------------LPPRKAPKKVI-CHACQTSK--------- 959
L+T + G L ++ C C
Sbjct: 1134 FLSTQVALAGGSGKARNQGAAAAAAKAASSQLTQASGSSGIVRCRRCAREAVFDDSRAIT 1193
Query: 960 -------------GMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V RYL E AAM I+M K++N
Sbjct: 1194 WEDGDGRRYVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFKVDN 1237
>C5PH78_COCP7 (tr|C5PH78) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_052510 PE=3 SV=1
Length = 1243
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1071 (42%), Positives = 602/1071 (56%), Gaps = 123/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF++R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRTSFTKRGASYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI L +G + V DR +++ + + ++ +C
Sbjct: 275 MILKALIETNDREIFERLVG------REGSLGINNTFVTDRMELLLRTYKAYGVHSKSKC 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+ +L N S + V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRYVLGMADNVSDEDVGTEFLRKIVLPHLGNQNVTEPQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D R G
Sbjct: 388 LYTLVAGDCAPDNPDAVSNQEVLLGGFLYGMILKERLEEWLRSIGPLARDWSNRNLGAL- 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F++ K + AR + ++E L TG LV+ TGLDLQQ +GYT+ A+++N+ R
Sbjct: 447 FTDPKFEKDFLGRIVARTNENLGGALEYFLSTGNLVSPTGLDLQQPSGYTIIAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLIATSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G I +IL T V E + VLLDG IVG +
Sbjct: 567 LDVSG-----------IPEIL----STLGVGSESSSSLEESVAVLLDGRIVGYCAPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 612 VIADTLRHWKVEGHPKIPTELEIGYVPNSNGGQYPGVYIFSQCARMYRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C +S +TH E PT +LS++AN TP+SD NQSPR
Sbjct: 667 DKLDYVGPFEQPFMEIACVQS----EITSGLSTHVEFDPTHILSILANMTPFSDFNQSPR 722
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQ M +I +R D KLY LQT QTPI R Y Y +D +P G NA+VA
Sbjct: 723 NMYQCQMGKQAMGTPGTSIAYRTDNKLYRLQTGQTPIARPPLYNAYGLDNFPNGMNAVVA 782
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRK 637
V++YTGYDM+DAMI+NKS+ ERG +G IY+T+ L ++ +R SR F
Sbjct: 783 VISYTGYDMDDAMIINKSAHERGFGYGTIYKTKIYALDDKEARGRGKSRREITKLFGFAP 842
Query: 638 SNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGS 682
+ K++ L DGLPHVG + +P Y TH LK K S
Sbjct: 843 GGLVKAEWRNHLGEDGLPHVGAKVAEGDIIAAWHTVQYDPAAETYLNVDKETHFLKYKDS 902
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E Y+D + + + Q V+I++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 903 EEGYIDSIRILGAETGNEACQAVSIKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPF 962
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG + TPF+ S + G
Sbjct: 963 S-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDCTPFQFSEEYTAG---- 1017
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ LR+ G+N+HG E +YSGV G+E +I+IG VYYQRLRHMV+DKFQVR+
Sbjct: 1018 -----DHFGEQLRKAGYNFHGNEPMYSGVTGREFAADIYIGVVYYQRLRHMVNDKFQVRT 1072
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ VT QP GEMERD+LLAHGAA+LL DRL CSD A +C CG
Sbjct: 1073 TGPVNAVTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSTRAWICRTCG 1132
Query: 921 SMLAT-----SFIQPQKLP-------------RREIGGLPPRKAPKKVI-CHACQTSKGM 961
S L+T + P K P R GG+ ++ C C
Sbjct: 1133 SFLSTQVAVSQLLNPHKNPAMEAVVKSSSAAVARPTGGVSALGGLSGIVRCRRCAREAVF 1192
Query: 962 E----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ V +P V +YL E AAM +KM ++N
Sbjct: 1193 DDPRAEVWEDGSGKRFVGGDQTTVVVVPGVLKYLDVELAAMGVKMKFHVDN 1243
>A8NYQ6_COPC7 (tr|A8NYQ6) DNA-directed RNA polymerase OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=CC1G_01405 PE=3 SV=2
Length = 1203
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1055 (41%), Positives = 616/1055 (58%), Gaps = 132/1055 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S +R SFS R YT AV IRCVR DQ+S+T L+YL N SA F + +EY++P+
Sbjct: 213 ISLIRPSFSNRGPSYTQYAVQIRCVRPDQTSVTNTLHYLANGSAMFRFTWRKQEYVIPIM 272
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++ SD EI + + Y+ + DR +++ + ++ T QC
Sbjct: 273 LILKALVNASDKEI---FEGVVMQDYDN-------TFLTDRVELLLRSFKMYTMHTGEQC 322
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ +L ++ + + +++ V VHL+ DKF +L++ML+K++SL+ G
Sbjct: 323 LEYLGDKFRVVLNLPEDWTNAAIGAWLIQKLVLVHLETPRDKFRMLLYMLRKMYSLISGE 382
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFVVKK 237
DNPDS Q+QEVLLPG L + +KE++E+ L + + + R DF + KK
Sbjct: 383 CCADNPDSPQHQEVLLPGSLYGMIIKERMEEILNAIRATIAMDVRTGANVDFHD----KK 438
Query: 238 CFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
F K + I + + N L TG LV+ TGLDLQQ +G+T+ A++LN+ R++SHFR +H
Sbjct: 439 YFAKVLTKVNFDIGSKMSNFLATGNLVSPTGLDLQQASGFTIVAEKLNWQRYISHFRCIH 498
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI + + I +
Sbjct: 499 RGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIITSPLTVAHIPN- 557
Query: 355 FKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
+L GMTQ + + L V LDG ++G ++ ++R K
Sbjct: 558 ---------LLAAHGMTQSFATSI--DGRKNLCVQLDGRVIGWARPVVAAQLATNLRIWK 606
Query: 415 VSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
+P DLE+G+VP S GG YPGL+LF++ +RF+RPV+ ++ N D IG FE
Sbjct: 607 TEGKYEVPLDLEIGFVPESHGGQYPGLFLFSTKARFMRPVKYLA-----NGKDDQIGSFE 661
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
QV+M I C P+ + G +TH E PT LS++AN TP+SD NQSPRN+YQCQM K
Sbjct: 662 QVYMNIACTPEEIEEGV-----STHVEHDPTNFLSILANMTPFSDFNQSPRNIYQCQMGK 716
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM + IQHR D KLY LQT Q+PIVR S + Y +D +P GTNA+VAV++YTGYDM
Sbjct: 717 QTMGTPATAIQHRTDNKLYRLQTGQSPIVRPSLHNTYGMDAFPNGTNAVVAVISYTGYDM 776
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIEKSK----- 644
EDAMILNKS+ ERG +G IY+++ +DL E S S P+ +I +
Sbjct: 777 EDAMILNKSAHERGFTYGTIYKSQIIDLKEVRGASKSSSTPTLHFGIAGDIRLTGDNAHP 836
Query: 645 ----LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD- 699
+D DGLP G ++P +P + + +T T +K KG E YVD V + + D
Sbjct: 837 CAEFVDKDGLPFPGVRVKPGDPLAAYIDDTTGRTRFVKYKGDETAYVDQVRLLGSDAGDS 896
Query: 700 -LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
LQKV++ R PR PVIGDKFSSRHGQKGVCSQ WP +DMPF +G++PD+IINPHAFP
Sbjct: 897 ELQKVHVTLRIPRAPVIGDKFSSRHGQKGVCSQKWPAIDMPF-SESGIQPDVIINPHAFP 955
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI ML+ES+A K G++HG +ATPF+ + ++D +D G+ L G+N
Sbjct: 956 SRMTIGMLVESMAGKAGAMHGLAQDATPFKFT-EEDTA--------IDYFGKQLLAAGYN 1006
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
Y+G E +YSG+ G+E +I+ G VYYQRLRHMV DKFQ R
Sbjct: 1007 YYGNEPMYSGITGQEFAADIYFGVVYYQRLRHMVLDKFQGRKRA---------------- 1050
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + + + E+
Sbjct: 1051 GGIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGY---EDVSLGEM 1107
Query: 939 GGLPPRK----APKKVICHAC--------------------------------------- 955
P ++ P C C
Sbjct: 1108 VSGPGQRLKPTGPGGEYCRICRAAAEEEEERERRAIQTGQHLQRPQADVTVAISSEHVLN 1167
Query: 956 QTSKG--METVAMPYVFRYLAAEFAAMNIKMTLKL 988
SKG ++ VA+PYVFRYL AE A+M I ++L++
Sbjct: 1168 SASKGGDLDVVAVPYVFRYLCAELASMGIAVSLEV 1202
>J3KIN9_COCIM (tr|J3KIN9) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_01122 PE=3 SV=1
Length = 1243
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1071 (42%), Positives = 602/1071 (56%), Gaps = 123/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF++R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRTSFTKRGASYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI L +G + V DR +++ + + ++ +C
Sbjct: 275 MILKALIETNDREIFERLVG------REGSLGINNTFVTDRMELLLRTYKAYGVHSKSKC 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+ +L N S + V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRYVLGMADNVSDEDVGTEFLRKIVLPHLGNQNVTEPQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D R G
Sbjct: 388 LYTLVAGDCAPDNPDAVSNQEVLLGGFLYGMILKERLEEWLRSIGPLARDWSNRNLGAL- 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F++ K + AR + ++E L TG LV+ TGLDLQQ +GYT+ A+++N+ R
Sbjct: 447 FTDPKFEKDFLGRIVARTNENLGGALEYFLSTGNLVSPTGLDLQQPSGYTIIAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLIATSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G I +IL T V E + VLLDG IVG +
Sbjct: 567 LDVSG-----------IPEIL----STLGVGSESSSSLEESVAVLLDGRIVGYCAPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 612 VIADTLRHWKVEGHPKIPTELEIGYVPNSNGGQYPGVYIFSQCARMYRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C +S +TH E PT +LS++AN TP+SD NQSPR
Sbjct: 667 DKLDYVGPFEQPFMEIACVPS----EITSGLSTHVEFDPTHILSILANMTPFSDFNQSPR 722
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQ M +I +R D KLY LQT QTPI R Y Y +D +P G NA+VA
Sbjct: 723 NMYQCQMGKQAMGTPGTSIAYRTDNKLYRLQTGQTPIARPPLYNAYGLDNFPNGMNAVVA 782
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRK 637
V++YTGYDM+DAMI+NKS+ ERG +G IY+T+ L ++ +R SR F
Sbjct: 783 VISYTGYDMDDAMIINKSAHERGFGYGTIYKTKIYALDDKEARGRGKSRREITKLFGFAP 842
Query: 638 SNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGS 682
+ K++ L DGLPHVG + +P Y TH LK K S
Sbjct: 843 GGLVKAEWRNHLGEDGLPHVGAKVAEGDIIAAWHTVQYDPAAETYLNVDKETHFLKYKDS 902
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E Y+D + + + Q V+I++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 903 EEGYIDSIRILGAETGNEACQAVSIKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPF 962
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG + TPF+ S + G
Sbjct: 963 S-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDCTPFQFSEEYTAG---- 1017
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ LR+ G+N+HG E +YSGV G+E +I+IG VYYQRLRHMV+DKFQVR+
Sbjct: 1018 -----DHFGEQLRKAGYNFHGNEPMYSGVTGREFAADIYIGVVYYQRLRHMVNDKFQVRT 1072
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ VT QP GEMERD+LLAHGAA+LL DRL CSD A +C CG
Sbjct: 1073 TGPVNAVTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSTRAWICRTCG 1132
Query: 921 SMLAT-----SFIQPQKLP-------------RREIGGLPPRKAPKKVI-CHACQTSKGM 961
S L+T + P K P R GG+ ++ C C
Sbjct: 1133 SFLSTQVAVSQLLNPHKNPAMEAVVKSSSAAVARPTGGVSALGGLSGIVRCRRCAREAVF 1192
Query: 962 E----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ V +P V +YL E AAM +KM ++N
Sbjct: 1193 DDPRAEVWEDGSGKRFVGGDQTTVVVVPGVLKYLDVELAAMGVKMKFHVDN 1243
>F9XDD3_MYCGM (tr|F9XDD3) DNA-directed RNA polymerase OS=Mycosphaerella graminicola
(strain CBS 115943 / IPO323) GN=MYCGRDRAFT_73125 PE=3
SV=1
Length = 1213
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1044 (41%), Positives = 613/1044 (58%), Gaps = 96/1044 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 208 MAIIRPSFEGRGATYTKYGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEFLVPVL 267
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+VLKAL +T+D EI + + K G Q V DR +++ + +L R +
Sbjct: 268 MVLKALTETNDREIFEGIVGPASSK-----GLDSKQFVTDRVELLLRTYKAYNLHGRSKT 322
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD-------DNFDKFNLLIFMLQKL 173
Y+G F+ +L ++ S + L+ V HL ++ DKF +LIFM++KL
Sbjct: 323 RAYLGSKFRVVLGVPEDLSDEAAGTEFLRKIVMPHLGSYEVTEANDSDKFRMLIFMIRKL 382
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS--------GKDEMKRKSG 225
+SLV+G +DNPD++QNQE+LLPG L + +KE++E+WL S G+
Sbjct: 383 YSLVEGECTIDNPDAVQNQEILLPGALYGMIIKERIEEWLTSIGLSLREWGRSNNWPSFN 442
Query: 226 TFDFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
+ DF + F+ K KT + +++ L TG LV+ TGLDLQQ +G+TV A+++N+ R
Sbjct: 443 SRDFDKDFM-PKIIRKT-NENLGQALDYFLSTGNLVSPTGLDLQQVSGFTVVAEKINFFR 500
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F++HFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I T
Sbjct: 501 FIAHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIATES 560
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D+ G + ++ G+ + L + +++ LDG I+G + +
Sbjct: 561 IDASG-----------VPGLISQMGVASVSDATL----EDSVSIQLDGRILGFCSPKQAK 605
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV + +P +LE+GYVPLS+GG YPG+Y+F+ +R RPV+ + +
Sbjct: 606 LIADTLRYWKVEGNQGVPTELEIGYVPLSIGGQYPGVYMFSQAARMYRPVKYLPL----- 660
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+ +D +GPFEQ FM I C + +S +TH E T +LS++AN+TP+S+ NQSPR
Sbjct: 661 EKLDYVGPFEQPFMSIACTEP----EVTSGDSTHVEFDVTNILSIIANQTPFSNQNQSPR 716
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQTM +++R D K Y LQT QTP+VRT + +Y +D +P GTNA+VA
Sbjct: 717 NMYQCQMGKQTMGTPGTALKYRTDNKSYRLQTGQTPVVRTPKHNEYGLDNFPNGTNAVVA 776
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQ-----GSRSDPSSRMFR--- 636
V++YTGYDM+DAMI+NKS+ ERG +G IY+ + +DL + G R + MF
Sbjct: 777 VISYTGYDMDDAMIINKSAHERGFGYGTIYKAKKIDLAAESKATRGGRGGAITNMFGFAP 836
Query: 637 ----KSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS-----------THTLKKKG 681
KS+ ++ LD DGL VG ++ +P S Y+ +H + K
Sbjct: 837 GAVVKSSWRET-LDDDGLGRVGVKLQEGDPVASTYSVVKDPLTGEYVNKDGISHIHRYKD 895
Query: 682 SEPVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDM 738
+E Y++ + + + Q ++IR+R PR+PVIGDKFSSRHGQKGVCSQ WP +DM
Sbjct: 896 TEAGYIEEIKMIGNEAGTSDPCQAISIRYRIPRSPVIGDKFSSRHGQKGVCSQKWPTIDM 955
Query: 739 PFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGES 798
PF +GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG + TPF+ K GE+
Sbjct: 956 PFT-ESGMQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDCTPFK--FKDKEGET 1012
Query: 799 EKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQV 858
++ G L+ G+NY+G E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQV
Sbjct: 1013 A-----VEYFGHQLKRAGYNYYGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKFQV 1067
Query: 859 RSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSL 918
R+TG V +T QP GEMERD+LLAHG A+LL DRL CSDY A +C
Sbjct: 1068 RTTGPVTPLTGQPIKGRAKGGGIRVGEMERDALLAHGTAFLLQDRLMNCSDYTKASICKA 1127
Query: 919 CGSMLATSFIQPQKLPRREIGGLP-----PRKAPKKVICHACQTSKG---------METV 964
CGS L+T Q RR GG R+A K C K + TV
Sbjct: 1128 CGSFLSTQPSVNQSFARRREGGRVRCRRCSRQASTKDPKSLCWEDKKGKKWVGGDEVTTV 1187
Query: 965 AMPYVFRYLAAEFAAMNIKMTLKL 988
A+P V +YL E AAM I+M ++
Sbjct: 1188 AVPGVLKYLDVELAAMGIRMKFQV 1211
>F5H643_HUMAN (tr|F5H643) DNA-directed RNA polymerase OS=Homo sapiens GN=POLR1B
PE=2 SV=1
Length = 924
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/990 (44%), Positives = 581/990 (58%), Gaps = 90/990 (9%)
Query: 22 IRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLKALIDTSDLEIRTNLKSC 81
+ CVR + S++ + L+YL N + L F + + LP+G LKAL+ SD +I L
Sbjct: 1 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELI-- 58
Query: 82 YNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQCLNYIGEHFQPILTELKNDS 139
KGK R V R+++EE T+ Q LNY+GE F+ L
Sbjct: 59 ------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYP 108
Query: 140 YDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLDNPDSLQNQEVLLPGH 199
+ A+ + + +HL N +KF +L M +KLF+L G + DNPDSL NQEVL PG
Sbjct: 109 NEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGECMEDNPDSLVNQEVLTPGQ 168
Query: 200 LITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSEIFVVKKCFDKTPARAISTSIE 252
L ++LKEKLE WL S K +K+ T + IF T ++ E
Sbjct: 169 LFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMRIF--------TMGIDLTKPFE 220
Query: 253 NMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLP 312
+ TG L + TGL L Q +G V AD+LN++R+LSHFR VHRGA FA +RTTTVR+LLP
Sbjct: 221 YLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAKMRTTTVRRLLP 280
Query: 313 ESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQ 372
ESWGFLCPVHTPDGEPCGL+NH+T C + + F SI +L + G+T
Sbjct: 281 ESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPA----------LLCNLGVTP 330
Query: 373 LVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEV 427
+ G P E VLLDG +VG + I +R KV IP +EV
Sbjct: 331 I------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGIADSLRHFKVLREKRIPPWMEV 384
Query: 428 GYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIRCPDGG 486
+P++ YPGL+LFT+P R VRPV+N+++ E LIG EQ+FM + +
Sbjct: 385 VLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLALGKEE-----LIGTMEQIFMNVAIFED- 438
Query: 487 DGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHR 546
+ TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQTM F T Q R
Sbjct: 439 ---EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDR 495
Query: 547 ADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 606
+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++YTGYDMEDAMI+NK+S ER
Sbjct: 496 SDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWER 555
Query: 607 GMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVGQMIRPDEPYC 664
G HG +Y++E +DL+E+ + D S K + KLD DGLP +G ++ +PY
Sbjct: 556 GFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYY 615
Query: 665 SIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSS 721
S N +T + + K E VD + V D + K + V I R PRNP IGDKF+S
Sbjct: 616 SYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCVCITMRVPRNPTIGDKFAS 674
Query: 722 RHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEF 781
RHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K +LHG
Sbjct: 675 RHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLC 733
Query: 782 VNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIG 841
+ATPF S E S L+ G+ML+ G+N++G E LYSG+ G EL +IFIG
Sbjct: 734 HDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGISGLELEADIFIG 784
Query: 842 PVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLH 901
VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLAHG ++LLH
Sbjct: 785 VVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLH 844
Query: 902 DRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKVICHACQTS 958
DRL CSD +A VC CGS+L+ +P PP + +K C C S
Sbjct: 845 DRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRNRKYNCTLCSRS 893
Query: 959 KGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 894 DTIDTVSVPYVFRYFVAELAAMNIKVKLDV 923
>E9CXA8_COCPS (tr|E9CXA8) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_02091 PE=3 SV=1
Length = 1243
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1071 (42%), Positives = 602/1071 (56%), Gaps = 123/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF++R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRTSFTKRGASYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI L +G + V DR +++ + + ++ +C
Sbjct: 275 MILKALIETNDREIFERLIG------REGSLGINNTFVTDRMELLLRTYKAYGVHSKSKC 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+ +L N S + V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRYVLGMADNVSDEDVGTEFLRKIVLPHLGNQNVTEPQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D R G
Sbjct: 388 LYTLVAGDCAPDNPDAVSNQEVLLGGFLYGMILKERLEEWLRSIGPLARDWSNRNLGAL- 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F++ K + AR + ++E L TG LV+ TGLDLQQ +GYT+ A+++N+ R
Sbjct: 447 FTDPKFEKDFLGRIVARTNENLGGALEYFLSTGNLVSPTGLDLQQPSGYTIIAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLIATSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G I +IL T V E + VLLDG IVG +
Sbjct: 567 LDVSG-----------IPEIL----STLGVGSESSSSLEESVAVLLDGRIVGYCAPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 612 VIADTLRHWKVEGHPKIPTELEIGYVPNSNGGQYPGVYIFSQCARMYRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C +S +TH E PT +LS++AN TP+SD NQSPR
Sbjct: 667 DKLDYVGPFEQPFMEIACVPS----EITSGLSTHVEFDPTHILSILANMTPFSDFNQSPR 722
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQ M +I +R D KLY LQT QTPI R Y Y +D +P G NA+VA
Sbjct: 723 NMYQCQMGKQAMGTPGTSIAYRTDNKLYRLQTGQTPIARPPLYNAYGLDNFPNGMNAVVA 782
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRK 637
V++YTGYDM+DAMI+NKS+ ERG +G IY+T+ L ++ +R SR F
Sbjct: 783 VISYTGYDMDDAMIINKSAHERGFGYGTIYKTKIYALDDKEARGRGKSRREITKLFGFAP 842
Query: 638 SNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGS 682
+ K++ L DGLPHVG + +P Y TH LK K S
Sbjct: 843 GGLVKAEWRNHLGEDGLPHVGAKVAEGDIIAAWHTVQYDPAAETYLNVDKETHFLKYKDS 902
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E Y+D + + + Q V+I++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 903 EEGYIDSIRILGAETGNEACQAVSIKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPF 962
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG + TPF+ S + G
Sbjct: 963 S-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDCTPFQFSEEYTAG---- 1017
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ LR+ G+N+HG E +YSGV G+E +I+IG VYYQRLRHMV+DKFQVR+
Sbjct: 1018 -----DHFGEQLRKAGYNFHGNEPMYSGVTGREFAADIYIGVVYYQRLRHMVNDKFQVRT 1072
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ VT QP GEMERD+LLAHGAA+LL DRL CSD A +C CG
Sbjct: 1073 TGPVNAVTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSTRAWICRTCG 1132
Query: 921 SMLAT-----SFIQPQKLP-------------RREIGGLPPRKAPKKVI-CHACQTSKGM 961
S L+T + P K P R GG+ ++ C C
Sbjct: 1133 SFLSTQVAVSQLLNPHKNPAMEAVVKSSSAAVARPTGGVSALGGLSGIVRCRRCAREAVF 1192
Query: 962 E----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ V +P V +YL E AAM +KM ++N
Sbjct: 1193 DDPRAEVWEDGSGKRFVGGDQTTVVVVPGVLKYLDVELAAMGVKMKFHVDN 1243
>F1SUA2_PIG (tr|F1SUA2) DNA-directed RNA polymerase (Fragment) OS=Sus scrofa
GN=POLR1B PE=2 SV=2
Length = 1172
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1002 (44%), Positives = 587/1002 (58%), Gaps = 71/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDK-AVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPV 59
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+
Sbjct: 227 IAMVRPKWKSRGPGYTQYVGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPL 286
Query: 60 GIVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTR 117
G LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 287 GFALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCATQ 334
Query: 118 LQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLV 177
Q LNY+GE F+ + + A+ + + + +HL N +KF +L M +KLF+L
Sbjct: 335 KQVLNYLGERFRVKVNLPDWYPNEQAAEFLFNECICIHLKSNTEKFYMLCLMTRKLFALA 394
Query: 178 DGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKK 237
G + +NPDSL NQEVL PG L ++LKEKLE WL S K + +K+ + + + +
Sbjct: 395 KGECMEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLVSIKIAIDKKAQK---TSVSLNTE 451
Query: 238 CFDKTPARAISTS--IENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
K I + E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHR
Sbjct: 452 NLMKILNLGIDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHR 511
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T TC + + F SI
Sbjct: 512 GADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTATCEVVTQFVYTASIP--- 568
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+ S+ VDS + E VLLDG +VG I +R KV
Sbjct: 569 ALLCSLGVTPVDSAPHRRYS--------ECYPVLLDGVMVGWADKELAPSIADSLRHFKV 620
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV +P++ YPGLYLFT+P R VRPV+N+ + E LIG E
Sbjct: 621 LREKRIPPWMEVVLIPMTGKPSLYPGLYLFTTPCRLVRPVQNLGLGREE-----LIGTME 675
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
Q+FM + D G TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM K
Sbjct: 676 QIFMNVAIFEDEVLAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGK 730
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F T + R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDM
Sbjct: 731 QTMGFPLLTFKDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDM 790
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLP 651
EDAMILNK+S ERG HG +Y++E +DL+E+ + D S + + KLD DGLP
Sbjct: 791 EDAMILNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVRPGDPRVAQKLDDDGLP 850
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRH 709
VG ++ +PY S N +T + + K E VD + V + + V I R
Sbjct: 851 FVGAQLQYGDPYYSYLNLNTGESFVVYYKSKENCIVDNIKVCGNDTGSGRFKCVCITMRV 910
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES
Sbjct: 911 PRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIES 969
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K +LHG +ATPF S E S L+ G+ML+ G+NY+G E LYSG+
Sbjct: 970 MAGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNYYGTERLYSGI 1020
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD
Sbjct: 1021 SGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERD 1080
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP-- 947
+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1081 ALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMR 1129
Query: 948 -KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1130 NRKYSCSLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDI 1171
>Q5RB08_PONAB (tr|Q5RB08) DNA-directed RNA polymerase OS=Pongo abelii
GN=DKFZp469M0918 PE=2 SV=1
Length = 1135
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/1012 (44%), Positives = 586/1012 (57%), Gaps = 92/1012 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 191 IAMVRPKWKTRGPGYTHFGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK R V R+++EE T+
Sbjct: 251 FALKALVSFSDYQIFQELI--------KGKEDDSFLRNSVSQMLRIVMEE----GCSTQK 298
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + A+ + + +HL N +KF +L M +KLF+L
Sbjct: 299 QVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAK 358
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSE 231
G + DNPDSL NQEVL PG L ++LKEKLE L S K +K+ T +
Sbjct: 359 GECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGLLVSIKIAFDKKAQKTNVSMNTDNLMR 418
Query: 232 IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFR 291
IF T ++ E + TG L + TGL L Q +G V AD+LN++R+LSHFR
Sbjct: 419 IF--------TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFR 470
Query: 292 AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSI 351
VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 471 CVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASI 530
Query: 352 KDYFKIKISILDILVDSGMTQLVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKI 406
+L + G+T + G P E VLLDG +VG + I
Sbjct: 531 PA----------LLCNLGVTPI------DGAPHRSYSECYPVLLDGVMVGWVDKELAPGI 574
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENK 465
+R KV IP EV +P++ + YPGL+LFT+P R VRPV+N+ + E
Sbjct: 575 ADSLRHFKVLREKRIPPWTEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE-- 632
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
LIG EQ+FM + D G TH+E+ P +LSV+AN P+SDHNQSPR
Sbjct: 633 ---LIGTMEQIFMNVAIFEDEVFAGV-----TTHQELFPHSLLSVIANFIPFSDHNQSPR 684
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVA
Sbjct: 685 NMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVA 744
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-- 642
V++YTGYDMEDAMI+NK+S ERG HG Y++E +DL+E+ + D S K +
Sbjct: 745 VISYTGYDMEDAMIVNKASWERGFAHGSAYKSEFIDLSEKIKQGDSSLVFGMKPGDPRIL 804
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKD 699
KLD DGLP +G ++ +PY S N +T + + K E VD + D + K
Sbjct: 805 QKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKACSNDTGSGK- 863
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
+ V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPS
Sbjct: 864 FKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPS 922
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K +LHG ATPF S E S L+ G+ML+ G+N+
Sbjct: 923 RMTIGMLIESMAGKSAALHGLCHGATPFIFS-------EENSA--LEYFGEMLKAAGYNF 973
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E LYSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP
Sbjct: 974 YGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQG 1033
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
FGEMERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P
Sbjct: 1034 GIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP--------- 1084
Query: 940 GLPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
PP + +K C C S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1085 --PPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1134
>I8TFR4_ASPO3 (tr|I8TFR4) DNA-directed RNA polymerase OS=Aspergillus oryzae (strain
3.042) GN=Ao3042_00881 PE=3 SV=1
Length = 1237
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/1064 (42%), Positives = 611/1064 (57%), Gaps = 116/1064 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR SF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MAIVRGSFVKRGHTYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L + + + V DR +++ + +L +R C
Sbjct: 276 MILKALVETNDREIFEGLVGSASSE------GINNTFVTDRVELLLRTYKGYNLHSRSAC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + S + L+ V HL + ++DKF L++FM++KL
Sbjct: 330 RAYLGEKFKPVLGVPMDMSNEEAGTEFLRKVVLPHLGNQNVTETQDYDKFKLIMFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDF 229
++LV G DNPD++ NQE+LL G L + LKE+LE+W++S +D R G F
Sbjct: 390 YALVAGDCAPDNPDAVSNQEILLGGFLYGMILKERLEEWVRSFGPILRDWSMRNHGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDPSFERDFLSKVVKRSNENIGGALEYFLSTGNLVSPTGLDLQQTSGYTVMAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I++
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTS-- 566
Query: 347 SQGSIKDYFKIKISIL-DILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
I +S L +LV G+ L E +TV LDG IVG +
Sbjct: 567 ---------DIDVSHLPRLLVQLGVRSESSVSLE----ESVTVQLDGRIVGFCSPKQARM 613
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV S +P +LE+GYVP S GG YPG+Y+F+ +R R V+ + +
Sbjct: 614 IADTLRHWKVEGSHNVPRELEIGYVPNSNGGQYPGIYMFSQAARMYREVKYLPL-----D 668
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 669 KLDYVGPFEQPFMEIACLPSDLVAG-----ISTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM I +R D KLY LQT QTPIVR Y Y +D +P GTNA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTAIDYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGTNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKSS ERG HG IY+T+ L E+ SR + S R K
Sbjct: 784 IISYTGYDMDDAMIINKSSHERGFGHGTIYKTKVHSLDEKESRRNKSRREITKLFGFAPG 843
Query: 638 SNIE---KSKLDSDGLPHVGQMIRPDE---PYCSI-YNASTSS-------THTLKKKGSE 683
I ++ +D DGLPH+G ++ Y ++ Y+A++ S TH +K K +E
Sbjct: 844 GEIRAEWRNTIDEDGLPHIGARVKEGSLVAAYHNVRYDAASDSYVNVDGITHFVKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
Y+D + + + Q +++++R PR PVIGDKFSSRHGQKGVCSQLWP VDMPF
Sbjct: 904 EGYIDSIRIMGAETGIEPCQSLSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PDLIINPHAFPSRMTI ++ES+A K G+LHG ++TPF+ S +
Sbjct: 964 -ESGIQPDLIINPHAFPSRMTIDQMIESMAGKAGALHGHPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D G LR+ G+NY+G E LYSG+ GKE +IFIG V+YQRLRHMV+DKFQVR+T
Sbjct: 1014 NTAADYFGHQLRKAGYNYYGNEPLYSGITGKEFAADIFIGVVHYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+ +T QP GEMERDSL+AHGAA++L DRL CSD A +C CGS
Sbjct: 1074 GPVNSLTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFILQDRLMNCSDTQRAWLCRDCGS 1133
Query: 922 MLATSFIQPQKLPRREIGG------------LPPRKAPKKVI-CHACQTSK--------- 959
L+T + G L ++ C C
Sbjct: 1134 FLSTQVALAGGSGKARNQGAAAAAAKAASSQLTQASGSSGIVRCRRCAREAVFDDSRAIT 1193
Query: 960 -------------GMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V RYL E AAM I+M K++N
Sbjct: 1194 WEDGDGRRYVGGDNVTVVAVPGVLRYLDVELAAMGIRMKFKVDN 1237
>R9AAU1_WALIC (tr|R9AAU1) Putative DNA-directed RNA polymerase I subunit RPA2
OS=Wallemia ichthyophaga EXF-994 GN=J056_002367 PE=4 SV=1
Length = 1179
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/1038 (41%), Positives = 612/1038 (58%), Gaps = 97/1038 (9%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +R SF+ R YT+ V IRCVR DQ+S T ++YL N A L F + EY++PV +
Sbjct: 189 SIIRPSFANRGPTYTEFGVQIRCVRPDQTSTTNTMHYLSNGGATLRFAWRKNEYMIPVIM 248
Query: 62 VLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
V+KAL SD +I + + Y+ + + DR +++ + L+T+ QC
Sbjct: 249 VMKALSSASDRDIFEGIIQKDYDNTF-----------LTDRVELLLRGFKPFRLYTKDQC 297
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G F+ +L + S V + +++ + VHL DK+ +L+FMLQKL+SLV G
Sbjct: 298 LFYLGSKFRVVLGCPDDWSDIQVGQHLIERCILVHLKTPEDKYRMLLFMLQKLYSLVSGE 357
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDFSEIFVVK 236
S DNPDS Q EVL+PG L +KEKL++ L + + +++R+ + + S+ V
Sbjct: 358 SCADNPDSPQLHEVLMPGFLYGQIIKEKLDECLIAASAQIRQDLRRQVSSTNLSDDKYVN 417
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K +T I + L TG LV+ +GLDLQQ G+T+ A++LN+ R+LSHFR +HRG
Sbjct: 418 KVIQRTNF-DIGQKLNYFLATGNLVSPSGLDLQQATGFTIMAEKLNFYRYLSHFRCIHRG 476
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TT VRKLLPE+WGFLCPVHTPDG PCGLLNH++ +C++T+ + + K
Sbjct: 477 AFFAELKTTAVRKLLPEAWGFLCPVHTPDGAPCGLLNHLSRSCKVTTENLEESASK---- 532
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
I +L GM Q P + + + LDG ++G + +V+ + +R K
Sbjct: 533 ----IPALLSGLGMIQ--PFIFTVDRRTHVAIHLDGRVIGWANTSDVKHMAEALRIWKTE 586
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P ++E+G VP S GG YPGLYLFTS +R +RPV+ ++ N +D +G FEQV
Sbjct: 587 GLHDVPLNMEIGLVPSSKGGQYPGLYLFTSRARMMRPVKYLA-----NGKLDHLGSFEQV 641
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M++ C P + G +TH E PT +LSVVAN TP+SD NQSPRNMYQCQMAKQT
Sbjct: 642 YMDVACVPKEIEKG-----ISTHVEFTPTNVLSVVANMTPFSDFNQSPRNMYQCQMAKQT 696
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S I R D KLY +Q Q+PIVR + + Y +D +P G NAIVAVL+YTGYDMED
Sbjct: 697 MGTPSTAIMRRTDNKLYRIQNGQSPIVRPNLHNNYGMDNFPQGANAIVAVLSYTGYDMED 756
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIE---KSKLDSD 648
AMI+NKS+ ERG +G +Y+++ VDL E S+S PS ++ + + LD D
Sbjct: 757 AMIINKSAHERGFGYGTVYKSQIVDLREMRGANKSKSTPSLHFGLGADAKREWRETLDDD 816
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIR 706
G+ G + +P C+ + +T T K KG E Y+D + + + D LQK++ +
Sbjct: 817 GIVPSGVKVTSGDPICAYIDETTQRTMVEKYKGDEDAYIDEIRLLGSDGGDSELQKIHFK 876
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R PR+PV+GDKFSSRHGQKGV SQ W +D+PF +G++PD+IINPHAFPSRMTI M
Sbjct: 877 IRIPRSPVVGDKFSSRHGQKGVMSQRWKKIDLPF-SESGLQPDVIINPHAFPSRMTIGMF 935
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG + TPF +S ++ G L+ G+NYHG E +Y
Sbjct: 936 VESIAGKAGALHGLAQDGTPF---------NFNESDTPVEYFGDQLKAAGYNYHGNEPMY 986
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SGV G+E +I++G VYYQRLRHMV+DK+QVR+ G VDQ+TRQP GEM
Sbjct: 987 SGVTGEEFPADIYLGCVYYQRLRHMVNDKYQVRTLGPVDQLTRQPIKGRKRHGGIRLGEM 1046
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD+L+AHG ++LL DRL CSDY A VC CGS+++ + + + LP +
Sbjct: 1047 ERDALIAHGTSFLLQDRLMNCSDYSTAWVCRDCGSLISLGYTDERDTRASQ---LP--QG 1101
Query: 947 PKKVICHACQTSK-----------------------------------GMETVAMPYVFR 971
P C C+ ++ M+ VA+PYV R
Sbjct: 1102 PTGEYCRVCRQAQQEEDKGEMDGEATQVKRKSDIILPLSKELNIGKGGNMDVVAVPYVLR 1161
Query: 972 YLAAEFAAMNIKMTLKLN 989
YLA+E A M I+M+++L+
Sbjct: 1162 YLASELACMGIRMSIELS 1179
>G5B002_HETGA (tr|G5B002) DNA-directed RNA polymerase OS=Heterocephalus glaber
GN=GW7_08919 PE=3 SV=1
Length = 1129
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1001 (43%), Positives = 585/1001 (58%), Gaps = 70/1001 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR D S++ + L+YL N + L F + + LP+G
Sbjct: 185 IALIRPKWKSRGPGYTQFGVSMHCVRGDHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 244
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KGK + V R+++EE T+
Sbjct: 245 FALKALVSFSDYQIFQELV--------KGKEDDSFFRNSVSQMLRIVMEE----GCSTQK 292
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L S + + + + +HL N +K +LL FM +KLF+L
Sbjct: 293 QVLNYLGECFRVKLNLPDWYSNEQATEFLFDQCICIHLKSNIEKLHLLCFMTRKLFALAK 352
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKK 237
G + +NPDSL NQE+L PG L ++LKEK+E WL S K + +++ + S + K
Sbjct: 353 GECMEENPDSLVNQEILTPGQLFLMFLKEKMEAWLMSIKIALDKRAQKTNVSINTENLMK 412
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRG
Sbjct: 413 IFSM--GGDLTRPFEYLLATGNLRSKTGLGFMQDSGLCVVADKLNFIRYLSHFRCVHRGG 470
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA +RTTTVR+LLPESWGFLCPV+TPDG PCGL+NH+T C + + F SI
Sbjct: 471 DFAKMRTTTVRRLLPESWGFLCPVNTPDGAPCGLMNHLTAICEVVTQFAYTTSIPAL--- 527
Query: 358 KISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
+ L ++ G P P E VLLDG +VG + I +R KV
Sbjct: 528 -LCTLGVMPVDGT---------PHCPYSECYPVLLDGVMVGWVDKELAPGIADSLRRFKV 577
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV VP++ YPGL+LFT+P R VRPV+N+ + E LIG E
Sbjct: 578 LREKRIPPWMEVALVPITGKSSLYPGLFLFTTPCRLVRPVQNLELGKEE-----LIGTME 632
Query: 475 QVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
Q+FM I + + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM+KQ
Sbjct: 633 QLFMNIAIFED----EVCAGVNTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMSKQ 688
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDME
Sbjct: 689 TMGFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDME 748
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPH 652
DAMI+NKSS ERG HG +Y+TE ++L+E+ + S K + KLD DGLP
Sbjct: 749 DAMIVNKSSWERGFAHGSVYKTEFINLSEKFKQGADSLVFGVKPGDPRIMQKLDDDGLPF 808
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHP 710
+G ++ +P+ N ST ++ + K E VD + V + + + I R P
Sbjct: 809 IGAKLQYGDPHYGYLNLSTGESYVVYYKSKENCIVDNIKVCSNDSGSGKFKCICITMRVP 868
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
RNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+
Sbjct: 869 RNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESM 927
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K +LHG +ATPF S E S L+ G+ML+ G+N++G E LYSG+
Sbjct: 928 AGKSAALHGLCHDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGIS 978
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+
Sbjct: 979 GVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDA 1038
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP--- 947
LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1039 LLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRN 1087
Query: 948 KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNI++ L +
Sbjct: 1088 RKYNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIRVKLDV 1128
>F6ZV36_XENTR (tr|F6ZV36) DNA-directed RNA polymerase OS=Xenopus tropicalis
GN=polr1b PE=3 SV=1
Length = 1135
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1006 (43%), Positives = 595/1006 (59%), Gaps = 78/1006 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + +RCVR + +++ + L+YL N S + F + + +P+G
Sbjct: 191 IAMIRPKWKNRGPGYTQYGISLRCVRDEHTAVNMNLHYLENGSVMVNFIYQKELFFIPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+D SD +I T L KGK R D ++ V + ++
Sbjct: 251 FALKALVDYSDYQIFTELI--------KGKEENSFYR--DCMTQMLRAVVEEGCHSQKNV 300
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+GE F+ + + A+ ++ + +HL N +KF +L M QKLF+
Sbjct: 301 LKYLGERFRVKFYLPDWFTDEQAAEFLISQCICIHLKTNVEKFYMLCMMTQKLFTFAKDG 360
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSG--TFDFSEIFVVKKC 238
+ +NPDSL QEV+ PG L+ ++LKEK+E WL K + +++ T D S ++K
Sbjct: 361 CMEENPDSLMYQEVMTPGQLLLMFLKEKMESWLLGVKVNLDKRAHKYTVDLSTETMMKVF 420
Query: 239 FDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGAS 298
T ++ + E +L TG L + TGL + Q +G V AD+LN++R+LSHFR VHRGA+
Sbjct: 421 ---TSTSDLTKTCEYLLATGNLRSKTGLGMLQSSGLVVVADKLNFIRYLSHFRCVHRGAA 477
Query: 299 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI---TSYFDSQGSIKDYF 355
FA +RTT+VR+LLPESWGFLCPVHTPDGEPCGL+NHMT C I TSY
Sbjct: 478 FAKMRTTSVRRLLPESWGFLCPVHTPDGEPCGLMNHMTAACEIVTQTSY----------- 526
Query: 356 KIKISILDILVDSGMTQL---VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
+ +L GMT + KL P V+LDG +VG + +V+ +R
Sbjct: 527 --NTLLPLLLCSLGMTPVDGTAGKLFADCYP----VMLDGAMVGWVEKTIAPGLVSALRN 580
Query: 413 LKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
KV +P E+ +P++ + YPGL+LFT+P R VRPVRN+++ E L+G
Sbjct: 581 YKVKHEKNVPPWTEIVLIPMTGKASLYPGLFLFTTPCRMVRPVRNLALGKEE-----LLG 635
Query: 472 PFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
EQVF+ + +G ++ TH+E P MLSVVAN P+SDHNQSPRNMYQCQM
Sbjct: 636 TLEQVFLNVAVYEGDIVPGET----THQEFFPHSMLSVVANFIPFSDHNQSPRNMYQCQM 691
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y +D YP GTNAIVAV++YTGY
Sbjct: 692 GKQTMGFPLMTYQDRSDNKLYRLQTPQSPLVRPSMYDYYEMDNYPIGTNAIVAVISYTGY 751
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE--KSKLDSDG 649
DMEDAM+LNKSS ERG HG +Y+T+ VDL+++ + + K + E K +LDSDG
Sbjct: 752 DMEDAMVLNKSSWERGFAHGSVYKTDHVDLSKKLKDGEDNLVFGIKPDDERVKGRLDSDG 811
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIR 706
LP VG +++ +PY N +T + K E +D + + D+ K + V +
Sbjct: 812 LPAVGAVLQFGDPYYGYLNLNTGESFVAYYKSKENCVIDNIKICSNDIGFGK-FKSVCVT 870
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML
Sbjct: 871 MRIPRNPTIGDKFASRHGQKGILSRLWPSEDMPFT-ESGMVPDILFNPHGFPSRMTIGML 929
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K +LHG +ATPF S E S L+ G+MLR G+N++G E LY
Sbjct: 930 IESMAGKSAALHGLCHDATPFTFS-------EENSA--LEYFGEMLRAGGYNFYGTEKLY 980
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEM
Sbjct: 981 SGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVQGGIRFGEM 1040
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD+LLAHG ++LLHDRL CSD A VC CGS+L+ +P PP +
Sbjct: 1041 ERDALLAHGTSFLLHDRLFNCSDRSTAHVCIECGSLLSPFLEKP-----------PPSWS 1089
Query: 947 P---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+K C C + +ETV++PYVFRY AE AAMNI + L ++
Sbjct: 1090 SIRNRKHHCEVCDRTDTVETVSVPYVFRYFVAELAAMNISVKLSVS 1135
>I4YFX2_WALSC (tr|I4YFX2) DNA-directed RNA polymerase OS=Wallemia sebi (strain ATCC
MYA-4683 / CBS 633.66) GN=WALSEDRAFT_67754 PE=3 SV=1
Length = 1179
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/1038 (41%), Positives = 612/1038 (58%), Gaps = 97/1038 (9%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
S +R SF+ R YT+ V IRCVR DQ++ T ++YL N A L F + EY++PV +
Sbjct: 189 SIIRPSFANRGPTYTEYGVQIRCVRPDQTAATNTMHYLSNGGATLRFAWRKNEYMIPVVM 248
Query: 62 VLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
VLKAL SD +I + + Y+ + + DR +++ + L+TR QC
Sbjct: 249 VLKALSSASDRDIFEGIIQKDYDNTF-----------LTDRVELLLRGFKPFKLYTREQC 297
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L+++G F+ +L ++ + V + ++ + VHL DK+ +L++MLQKL+SLV G
Sbjct: 298 LHFLGSKFRVVLGCPEDWTDIQVGQYLIDRCILVHLQSPQDKYRMLLYMLQKLYSLVSGE 357
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDFSEIFVVK 236
S DNPDS Q EVL+PG L +KEKL++ L + + +++R+ + + S+ V
Sbjct: 358 SCPDNPDSPQLHEVLMPGFLYGQIIKEKLDECLIAATAQIRQDLRRQVSSANVSDDKYVN 417
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K +T I + L TG LV+ +GLDLQQ G+T+ A++LN+ R+L+HFR +HRG
Sbjct: 418 KVIQRTNF-DIGQKLNYFLATGNLVSPSGLDLQQATGFTIMAEKLNFYRYLAHFRCIHRG 476
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TT VRKLLPE+WGFLCPVHTPDG PCGLLNH++ +C++T+ ++ +
Sbjct: 477 AFFAELKTTAVRKLLPEAWGFLCPVHTPDGAPCGLLNHLSRSCKVTT--------ENLEE 528
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+I +L GM Q P + + + LDG I+G + +V+ + +R K
Sbjct: 529 SASNIPSLLSSLGMIQ--PFVNTVDRRNSVAIQLDGRIIGWASTEDVKHMAEALRIWKTE 586
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P +LE+G VP S GG YPGLYLFTS +R +RPV+ ++ N +D +G FEQV
Sbjct: 587 KLHDVPLNLEIGLVPSSKGGQYPGLYLFTSRARMMRPVKYLA-----NGKLDHLGSFEQV 641
Query: 477 FMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+M++ C P + G +TH E PT +LSVVAN TP+SD NQSPRNMYQCQMAKQT
Sbjct: 642 YMDVACVPKEIEKG-----ISTHVEYTPTNVLSVVANMTPFSDFNQSPRNMYQCQMAKQT 696
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M S I R D KLY +Q QTPIVR + Y +D +P G NAIVAVL+YTGYDMED
Sbjct: 697 MGTPSTAIMRRTDNKLYRIQNGQTPIVRPKLHAHYGMDNFPQGANAIVAVLSYTGYDMED 756
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTE----QGSRSDPSSRMFRKSNIE---KSKLDSD 648
AMI+NKS+ ERG +G +Y+++ VDL E SRS P+ + + + LD D
Sbjct: 757 AMIINKSAHERGFGYGTVYKSQIVDLREMRGASKSRSAPTLHFGLGVDAKQEWRETLDDD 816
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIR 706
G+ G + +P C+ + +T T K KG E Y+D + + + D LQK++ +
Sbjct: 817 GIIPSGVKVTSGDPICAYIDETTGRTMVEKYKGDEDAYIDEIRLLGSDGGDTELQKIHFK 876
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R PR+PV+GDKFSSRHGQKGV SQ W +D+PF +G++PD+IINPHAFPSRMTI M
Sbjct: 877 IRIPRSPVVGDKFSSRHGQKGVMSQRWKKIDLPF-SESGLQPDVIINPHAFPSRMTIGMF 935
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G+LHG + TPF + K E G+ L+ G+NYHG E +Y
Sbjct: 936 VESIAGKAGALHGLAQDGTPFNFNEKDTPVEY---------FGEQLKSAGYNYHGNEPMY 986
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SGV G+E +I+IG VYYQRLRHMV+DK+QVR+ G VDQ+TRQP GEM
Sbjct: 987 SGVTGEEFPADIYIGCVYYQRLRHMVNDKYQVRTLGPVDQLTRQPIKGRKRHGGIRLGEM 1046
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD+L+AHG ++LL DRL CSDY VC CGS+++ + + + + LP +
Sbjct: 1047 ERDALIAHGTSFLLQDRLMNCSDYSTTWVCRDCGSLISLGYTDERDMAASQ---LP--QG 1101
Query: 947 PKKVICHACQTSK-----------------------------------GMETVAMPYVFR 971
P C C+ ++ M+ VA+PYV R
Sbjct: 1102 PTGEYCRVCRQAQLEKDQGELDGEVRQVERKGDIILPLSKDLNIGKGGNMDVVAVPYVLR 1161
Query: 972 YLAAEFAAMNIKMTLKLN 989
YLA+E A M I+M+++L+
Sbjct: 1162 YLASELACMGIRMSVELS 1179
>B7Z6Y7_HUMAN (tr|B7Z6Y7) cDNA FLJ53412, highly similar to DNA-directed RNA
polymerase I 135 kDa polypeptide (EC 2.7.7.6) OS=Homo
sapiens PE=2 SV=1
Length = 924
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/990 (44%), Positives = 580/990 (58%), Gaps = 90/990 (9%)
Query: 22 IRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLKALIDTSDLEIRTNLKSC 81
+ CVR + S++ + L+YL N + L F + + LP+G LKAL+ SD +I L
Sbjct: 1 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELI-- 58
Query: 82 YNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQCLNYIGEHFQPILTELKNDS 139
KGK R V R+++EE T+ Q LNY+GE F+ L
Sbjct: 59 ------KGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYP 108
Query: 140 YDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLDNPDSLQNQEVLLPGH 199
+ A+ + + +HL N +KF +L M +KLF+L G + DNPDSL NQEVL PG
Sbjct: 109 NEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGECMEDNPDSLVNQEVLTPGQ 168
Query: 200 LITLYLKEKLEDWLQSGKDEMKRKS-------GTFDFSEIFVVKKCFDKTPARAISTSIE 252
L ++LKEKLE WL S K +K+ T + IF T ++ E
Sbjct: 169 LFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMRIF--------TMGIDLTKPFE 220
Query: 253 NMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLP 312
+ TG L + TGL L Q +G V AD+LN++R+LSHFR VHRGA FA +RTTTVR+LLP
Sbjct: 221 YLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAKMRTTTVRRLLP 280
Query: 313 ESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQ 372
ESWGFLCPVHTPDGEPCGL+NH+T C + + F SI +L + G+T
Sbjct: 281 ESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPA----------LLCNLGVTP 330
Query: 373 LVPKLLLPGPP-----EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEV 427
+ G P E VLLDG +VG + I +R KV IP +EV
Sbjct: 331 I------DGAPHRSYSECYPVLLDGVMVGWVDKDLAPGIADSLRHFKVLREKRIPPWMEV 384
Query: 428 GYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIRCPDGG 486
+P++ YPGL+LFT+P R VRPV+N+++ E LIG EQ+FM + +
Sbjct: 385 VLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLALGKEE-----LIGTMEQIFMNVAIFED- 438
Query: 487 DGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHR 546
+ TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQTM F T Q R
Sbjct: 439 ---EVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDR 495
Query: 547 ADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 606
+D KLY LQTPQ+P+VR S Y Y++D YP GTNAIVAV++YTGYDMEDAMI+NK+S ER
Sbjct: 496 SDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWER 555
Query: 607 GMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVGQMIRPDEPYC 664
G HG +Y++E +DL+E+ + D S K + KLD DGLP +G ++ +PY
Sbjct: 556 GFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYY 615
Query: 665 SIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSS 721
S N +T + + K E VD + V D + K + V I R PRNP IGDKF+S
Sbjct: 616 SYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCVCITMRVPRNPTIGDKFAS 674
Query: 722 RHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEF 781
R GQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K +LHG
Sbjct: 675 RRGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLC 733
Query: 782 VNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIG 841
+ATPF S E S L+ G+ML+ G+N++G E LYSG+ G EL +IFIG
Sbjct: 734 HDATPFIFS-------EENSA--LEYFGEMLKAAGYNFYGTERLYSGISGLELEADIFIG 784
Query: 842 PVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLH 901
VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLAHG ++LLH
Sbjct: 785 VVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLH 844
Query: 902 DRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKVICHACQTS 958
DRL CSD +A VC CGS+L+ +P PP + +K C C S
Sbjct: 845 DRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRNRKYNCTLCSRS 893
Query: 959 KGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 894 DTIDTVSVPYVFRYFVAELAAMNIKVKLDV 923
>F2TK04_AJEDA (tr|F2TK04) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ATCC 18188 / CBS 674.68) GN=BDDG_06511 PE=3 SV=1
Length = 1243
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1071 (42%), Positives = 607/1071 (56%), Gaps = 123/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VRNSF++R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 215 MAIVRNSFTKRGPTYTKYGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEFLVPVA 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D +I L +G + V DR +++ + L R
Sbjct: 275 MILKALVETNDRDIFERLVG------REGSKGIQNSFVTDRVELLLRTYKGYGLHGRDDT 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + + V L+ V HL + + DKFN+++FM++KL
Sbjct: 329 RAYLGEKFRPVLGMPADMPDEAVGTEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKL 388
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDF 229
++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D R F
Sbjct: 389 YTLVAGDCAPDNPDAISNQEVLLGGFLYGMLLKERLEEWLRSFGPVARDWAFRNQNA-PF 447
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
S+ K+ + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 448 SDPRFEKEFLSRIVTRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVIAEKINFYRF 507
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 508 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCEIATSNL 567
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D G + ++ + G+T L E + V LDG I+G +
Sbjct: 568 DVSG-----------VPQVISNLGVTSESSVAL----DESVVVQLDGRILGYCSPKQARM 612
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV +P +LE+GYVP S G YPG+YLF+ +R +RPV+ + +
Sbjct: 613 ISDTLRYWKVEGHRSLPVELEIGYVPNSNRGQYPGIYLFSQCARMLRPVKYLPL-----D 667
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GP EQ +MEI C P G +TH E PT +LS+VAN TP+SD NQSPR
Sbjct: 668 KLDYVGPLEQPYMEIACLPSDITSG-----VSTHVEFDPTHILSIVANMTPFSDFNQSPR 722
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQ M ++++R D KLY LQT Q+P+VR+ Y Y +D +P G NA+VA
Sbjct: 723 NMYQCQMSKQAMGTPGSSMEYRTDNKLYRLQTGQSPVVRSPLYNSYGLDNFPNGMNAVVA 782
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRK 637
VL+YTGYDM+DAMI+NKS+ +RG G IY+T+ L ++ SR +R F
Sbjct: 783 VLSYTGYDMDDAMIINKSAHDRGFGWGTIYKTKIYSLDDKESRGRGKARREVSKLFGFAP 842
Query: 638 SNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGS 682
+ K + LD DGLPH+G + +P + Y TH LK K +
Sbjct: 843 GGLVKGEWRDALDEDGLPHIGARVTEGSLVAAWHTVRFDPVSNSYVNIDRQTHFLKYKDT 902
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E YVD V + Q ++++FR PR P+IGDKFSSRHGQKGVCSQLWP +DMPF
Sbjct: 903 EEGYVDSVRILGSETGGDPCQALSVKFRIPRKPLIGDKFSSRHGQKGVCSQLWPAIDMPF 962
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG +ATPFR S + G
Sbjct: 963 S-ETGIQPDIIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDATPFRFSEENTAG---- 1017
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKFQVR+
Sbjct: 1018 -----DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKFQVRT 1072
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ +T QP GEMERDSLLAHGAA+LL DRL CSD + +C CG
Sbjct: 1073 TGPVNALTGQPVKGRAKGGGIRVGEMERDSLLAHGAAFLLQDRLMNCSDTTRSWICRTCG 1132
Query: 921 SMLATS-----FIQPQKLP-------------RREIGGLPPRKAPKKVI-CHACQTSK-- 959
S L+T + P K P R G + ++ C C
Sbjct: 1133 SFLSTQVAVSKLMAPSKNPAMAAVAKSSSSGLARPGGAVSALGGTAGIVRCRRCAREAIF 1192
Query: 960 ------------------GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
G +T VA+P V +YL E AAM I+MT K+NN
Sbjct: 1193 DDPRAEVWEDGEGKRFVGGDDTTVVAVPGVLKYLDVELAAMGIRMTFKVNN 1243
>C5JLQ2_AJEDS (tr|C5JLQ2) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain SLH14081) GN=BDBG_03350 PE=3 SV=1
Length = 1243
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1071 (42%), Positives = 607/1071 (56%), Gaps = 123/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VRNSF++R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 215 MAIVRNSFTKRGPTYTKYGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEFLVPVA 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D +I L +G + V DR +++ + L R
Sbjct: 275 MILKALVETNDRDIFERLVG------REGSKGIQNSFVTDRVELLLRTYKGYGLHGRDDT 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + + V L+ V HL + + DKFN+++FM++KL
Sbjct: 329 RAYLGEKFRPVLGMPADMPDEAVGTEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKL 388
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDF 229
++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D R F
Sbjct: 389 YTLVAGDCAPDNPDAISNQEVLLGGFLYGMLLKERLEEWLRSFGPVARDWAFRNQNA-PF 447
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
S+ K+ + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 448 SDPRFEKEFLSRIVTRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVIAEKINFYRF 507
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 508 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCEIATSNL 567
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D G + ++ + G+T L E + V LDG I+G +
Sbjct: 568 DVSG-----------VPQVISNLGVTSESSVAL----DESVVVQLDGRILGYCSPKQARM 612
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV +P +LE+GYVP S G YPG+YLF+ +R +RPV+ + +
Sbjct: 613 ISDTLRYWKVEGHRSLPVELEIGYVPNSNRGQYPGIYLFSQCARMLRPVKYLPL-----D 667
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GP EQ +MEI C P G +TH E PT +LS+VAN TP+SD NQSPR
Sbjct: 668 KLDYVGPLEQPYMEIACLPSDITSG-----VSTHVEFDPTHILSIVANMTPFSDFNQSPR 722
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQ M ++++R D KLY LQT Q+P+VR+ Y Y +D +P G NA+VA
Sbjct: 723 NMYQCQMSKQAMGTPGSSMEYRTDNKLYRLQTGQSPVVRSPLYNSYGLDNFPNGMNAVVA 782
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRK 637
VL+YTGYDM+DAMI+NKS+ +RG G IY+T+ L ++ SR +R F
Sbjct: 783 VLSYTGYDMDDAMIINKSAHDRGFGWGTIYKTKIYSLDDKESRGRGKARREVSKLFGFAP 842
Query: 638 SNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGS 682
+ K + LD DGLPH+G + +P + Y TH LK K +
Sbjct: 843 GGLVKGEWRDALDEDGLPHIGARVTEGSLVAAWHTVRFDPVSNSYVNIDRQTHFLKYKDT 902
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E YVD V + Q ++++FR PR P+IGDKFSSRHGQKGVCSQLWP +DMPF
Sbjct: 903 EEGYVDSVRILGSETGGDPCQALSVKFRIPRKPLIGDKFSSRHGQKGVCSQLWPAIDMPF 962
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG +ATPFR S + G
Sbjct: 963 S-ETGIQPDIIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDATPFRFSEENTAG---- 1017
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKFQVR+
Sbjct: 1018 -----DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKFQVRT 1072
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ +T QP GEMERDSLLAHGAA+LL DRL CSD + +C CG
Sbjct: 1073 TGPVNALTGQPVKGRAKGGGIRVGEMERDSLLAHGAAFLLQDRLMNCSDTTRSWICRTCG 1132
Query: 921 SMLATS-----FIQPQKLP-------------RREIGGLPPRKAPKKVI-CHACQTSK-- 959
S L+T + P K P R G + ++ C C
Sbjct: 1133 SFLSTQVAVSKLMAPSKNPAMAAVAKSSSSGLARPGGAVSALGGTAGIVRCRRCAREAIF 1192
Query: 960 ------------------GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
G +T VA+P V +YL E AAM I+MT K+NN
Sbjct: 1193 DDPRAEVWEDGEGKRFVGGDDTTVVAVPGVLKYLDVELAAMGIRMTFKVNN 1243
>C5GTC3_AJEDR (tr|C5GTC3) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ER-3 / ATCC MYA-2586) GN=BDCG_07666 PE=3 SV=1
Length = 1243
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1071 (42%), Positives = 607/1071 (56%), Gaps = 123/1071 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VRNSF++R YT + IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 215 MAIVRNSFTKRGPTYTKYGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEFLVPVA 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D +I L +G + V DR +++ + L R
Sbjct: 275 MILKALVETNDRDIFERLVG------REGSKGIQNSFVTDRVELLLRTYKGYGLHGRDDT 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + + V L+ V HL + + DKFN+++FM++KL
Sbjct: 329 RAYLGEKFRPVLGMPADMPDEAVGTEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKL 388
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDF 229
++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D R F
Sbjct: 389 YTLVAGDCAPDNPDAISNQEVLLGGFLYGMLLKERLEEWLRSFGPVARDWAFRNQNA-PF 447
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
S+ K+ + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 448 SDPRFEKEFLSRIVTRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVIAEKINFYRF 507
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 508 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCEIATSNL 567
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D G + ++ + G+T L E + V LDG I+G +
Sbjct: 568 DVSG-----------VPQVISNLGVTSESSVAL----DESVVVQLDGRILGYCSPKQARM 612
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV +P +LE+GYVP S G YPG+YLF+ +R +RPV+ + +
Sbjct: 613 ISDTLRYWKVEGHRSLPVELEIGYVPNSNRGQYPGIYLFSQCARMLRPVKYLPL-----D 667
Query: 466 NIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GP EQ +MEI C P G +TH E PT +LS+VAN TP+SD NQSPR
Sbjct: 668 KLDYVGPLEQPYMEIACLPSDITSG-----VSTHVEFDPTHILSIVANMTPFSDFNQSPR 722
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQ M ++++R D KLY LQT Q+P+VR+ Y Y +D +P G NA+VA
Sbjct: 723 NMYQCQMSKQAMGTPGSSMEYRTDNKLYRLQTGQSPVVRSPLYNSYGLDNFPNGMNAVVA 782
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRK 637
VL+YTGYDM+DAMI+NKS+ +RG G IY+T+ L ++ SR +R F
Sbjct: 783 VLSYTGYDMDDAMIINKSAHDRGFGWGTIYKTKIYSLDDKESRGRGKARREVSKLFGFAP 842
Query: 638 SNIEKSK----LDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGS 682
+ K + LD DGLPH+G + +P + Y TH LK K +
Sbjct: 843 GGLVKGEWRDALDEDGLPHIGARVTEGSLVAAWHTVRFDPVSNSYVNIDRQTHFLKYKDT 902
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E YVD V + Q ++++FR PR P+IGDKFSSRHGQKGVCSQLWP +DMPF
Sbjct: 903 EEGYVDSVRILGSETGGDPCQALSVKFRIPRKPLIGDKFSSRHGQKGVCSQLWPAIDMPF 962
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG +ATPFR S + G
Sbjct: 963 S-ETGIQPDIIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDATPFRFSEENTAG---- 1017
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKFQVR+
Sbjct: 1018 -----DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKFQVRT 1072
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V+ +T QP GEMERDSLLAHGAA+LL DRL CSD + +C CG
Sbjct: 1073 TGPVNALTGQPVKGRAKGGGIRVGEMERDSLLAHGAAFLLQDRLMNCSDTTRSWICRTCG 1132
Query: 921 SMLATS-----FIQPQKLP-------------RREIGGLPPRKAPKKVI-CHACQTSK-- 959
S L+T + P K P R G + ++ C C
Sbjct: 1133 SFLSTQVAVSKLMAPSKNPAMAAVAKSSSSGLARPGGAVSALGGTAGIVRCRRCAREAIF 1192
Query: 960 ------------------GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
G +T VA+P V +YL E AAM I+MT K+NN
Sbjct: 1193 DDPRAEVWEDGEGKRFVGGDDTTVVAVPGVLKYLDVELAAMGIRMTFKVNN 1243
>F7A946_CALJA (tr|F7A946) DNA-directed RNA polymerase OS=Callithrix jacchus
GN=POLR1B PE=3 SV=1
Length = 924
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/981 (45%), Positives = 582/981 (59%), Gaps = 72/981 (7%)
Query: 22 IRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLKALIDTSDLEIRTNLKSC 81
+ CV+ + S++ + L+YL N + L F + + LP+G LKAL+ SD +I L
Sbjct: 1 MHCVKEEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELI-- 58
Query: 82 YNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYIGEHFQPILTELKNDS 139
KGK + V R+++EE T+ Q LNY+GE F+ L
Sbjct: 59 ------KGKEDDSFFRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYP 108
Query: 140 YDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLDNPDSLQNQEVLLPGH 199
+ A+ + + +HL N +KF +L M +KLF+L G + DNPDSL NQEVL PG
Sbjct: 109 NEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGECMEDNPDSLVNQEVLTPGQ 168
Query: 200 LITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCFDKTPARAISTSIENMLKTG 258
L ++LKEKLE WL S K +K+ + S + K F T ++ E +L TG
Sbjct: 169 LFLMFLKEKLEGWLVSIKIVFDKKAQKTNLSMNTDNLMKIF--TMGLDLTKPFEYLLATG 226
Query: 259 RLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFL 318
L + TGL L Q +G V AD+LN++R+LSHFR VHRG+ FA +RTTTVR+LLPESWGFL
Sbjct: 227 NLRSKTGLGLLQASGLCVVADKLNFIRYLSHFRCVHRGSDFAKMRTTTVRRLLPESWGFL 286
Query: 319 CPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLL 378
CPVHTPDGEPCGL+NH+T C + + F SI +L + G+T P
Sbjct: 287 CPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPA----------LLCNLGVT---PVDG 333
Query: 379 LPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLS-MG 435
P P E VLLDG +VG + I +R KV IP +EV +P++
Sbjct: 334 APHQPYSECYPVLLDGVMVGWVDKELALGIADSLRHFKVLREKRIPPWMEVVLIPMTGKP 393
Query: 436 GAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFP 495
YPGL+LFT+P R +RPV+N+ + E LIG EQ+FM + + +
Sbjct: 394 SLYPGLFLFTTPCRLIRPVQNLELGKEE-----LIGTMEQIFMNVAIYED----EVFAGV 444
Query: 496 ATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQ 555
TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQTM F T Q R+D KLY LQ
Sbjct: 445 TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQ 504
Query: 556 TPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQ 615
TPQ+P+VR S Y Y++D YP GTNAIVAV++YTGYDMEDAMI+NK+S ERG HG +Y+
Sbjct: 505 TPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYK 564
Query: 616 TETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLPHVGQMIRPDEPYCSIYNASTSS 673
+E +DL+E+ + D S K + KLD DGLP +G ++ +PY S N +T
Sbjct: 565 SEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGE 624
Query: 674 THTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 730
+ + K E VD + V D + K + V I R PRNP IGDKF+SRHGQKG+ S
Sbjct: 625 SFVMYYKSKENCVVDNIKVCSNDTGSGK-FKCVCITMRVPRNPTIGDKFASRHGQKGILS 683
Query: 731 QLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGS 790
+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K +LHG +ATPF S
Sbjct: 684 RLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFS 742
Query: 791 VKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRH 850
E S L+ G+ML+ G+N++G E LYSG+ G EL +IFIG VYYQRLRH
Sbjct: 743 -------EENSA--LEYFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRH 793
Query: 851 MVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDY 910
MVSDKFQVR+TG D+VT QP FGEMERD+LLAHG ++LLHDRL CSD
Sbjct: 794 MVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDR 853
Query: 911 HIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKVICHACQTSKGMETVAMP 967
+A VC CGS+L+ +P PP + +K C C S ++TV++P
Sbjct: 854 SVAHVCVKCGSLLSPLLEKP-----------PPSWSAMRNRKYNCTLCHRSDTIDTVSVP 902
Query: 968 YVFRYLAAEFAAMNIKMTLKL 988
YVFRY AE AAMNIK+ L +
Sbjct: 903 YVFRYFVAELAAMNIKVKLDV 923
>E4V6W4_ARTGP (tr|E4V6W4) DNA-directed RNA polymerase OS=Arthroderma gypseum
(strain ATCC MYA-4604 / CBS 118893) GN=MGYG_08753 PE=3
SV=1
Length = 1243
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/1072 (42%), Positives = 612/1072 (57%), Gaps = 127/1072 (11%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +RNSF +R YT V IR VR DQ+S T L+YL + + F + EYL+PV +
Sbjct: 216 AIIRNSFQKRGSAYTKFGVQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMM 275
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQ 119
+LKALI+T+D EI E+ G+G++G + V DR +++ + + +R +
Sbjct: 276 ILKALIETNDREIF--------ERLVGGEGSLGIENTFVTDRVELLLRTYKAYGVHSRSK 327
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQK 172
C Y+G F+ +L ++ + V L+ V HL + N DKFN+++FM++K
Sbjct: 328 CRAYLGSKFRFVLGMPEDVPDEDVGTEFLRKIVLPHLGNQNVTETQNNDKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDF 229
L++LV G DNPD++ NQEVLL G+L + LKE+LE+WL+S + + K+ F
Sbjct: 388 LYNLVAGDCAPDNPDAVSNQEVLLGGYLYGMLLKERLEEWLKSVGPIVRDWRLKNDDAKF 447
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 448 TDPSFERDFLARVIGRTNENIGGAMEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRF 507
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 508 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTSNL 567
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D G + +L G+T P VLLDG I+G +
Sbjct: 568 DVSG-----------VPGVLAGLGVTSESSCSTEESIP----VLLDGKILGYCTPKQSRV 612
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPVR + +
Sbjct: 613 IADTLRYWKVQGHKHIPVELEIGYVPSSNGGQYPGVYMFSEAARMYRPVRYLPL-----D 667
Query: 466 NIDLIGPFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+D +GPFEQ +MEI C D +G +TH E PT +LS++AN TP+SD NQSP
Sbjct: 668 RLDYVGPFEQPYMEIACVASDIKNG------VSTHIEFDPTHILSILANMTPFSDFNQSP 721
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQ M I++R D KLY LQT QTP+VR Y Y +D +P G NA+V
Sbjct: 722 RNMYQCQMGKQAMGTPGTAIEYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGMNAVV 781
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FR 636
AV++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S+ F
Sbjct: 782 AVISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIYALDDKESRGRGKSKRAITKLFGFA 841
Query: 637 KSNI----EKSKLDSDGLPHVGQMIRPDEPYCSIYNAS-----------TSSTHTLKKKG 681
+ KS+LD DGLPH+G + C+ Y TH LK K
Sbjct: 842 PGGLIKAEWKSQLDEDGLPHIGAKVSEGSLVCAWYTVQYDPATDTYINVDKQTHFLKYKD 901
Query: 682 SEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMP 739
E +VD V V + Q V+I++R PR PVIGDKFSSRHGQKGV SQLWP DMP
Sbjct: 902 GEEGFVDSVRVLGSETGNEVCQAVSIKYRVPRRPVIGDKFSSRHGQKGVLSQLWPSADMP 961
Query: 740 FCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE 799
F +G++PD+IINPHAFPSRMTI M +ES+A K GSLHG ++TPF+ S + G
Sbjct: 962 FS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGSLHGLPQDSTPFQFSEETTAG--- 1017
Query: 800 KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVR 859
D G+ L++ G+N+HG E +YSG+ G+E +I+IG VYYQRLRHMV+DKFQVR
Sbjct: 1018 ------DYFGKQLQKAGYNFHGNEPMYSGITGREFAADIYIGVVYYQRLRHMVNDKFQVR 1071
Query: 860 STGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 919
+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C C
Sbjct: 1072 TTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSQRAWICRAC 1131
Query: 920 GSMLAT-----SFIQPQKLPRRE-------------------IGGLP--------PRKA- 946
GS ++T + P K P E +GGL R+A
Sbjct: 1132 GSFISTQVAVSQLLSPHKNPAMEAVVQSTADAIAKPLSGVSALGGLAGIVRCRRCAREAV 1191
Query: 947 ---PKKVICHACQTSK---GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
P+ + + G +T VA+P V +YL E AAM IKM ++N
Sbjct: 1192 FDDPRAEVWEDGTGKRYVGGSDTTVVAVPGVLKYLDVELAAMGIKMRFHVDN 1243
>C4Y3J9_CLAL4 (tr|C4Y3J9) DNA-directed RNA polymerase OS=Clavispora lusitaniae
(strain ATCC 42720) GN=CLUG_03112 PE=3 SV=1
Length = 1232
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1023 (43%), Positives = 598/1023 (58%), Gaps = 95/1023 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT V IRCVR DQ+S T L+YL++ + F + EYL+PV
Sbjct: 259 MALIRPSFGNRGASYTKFGVQIRCVRPDQTSQTNVLHYLKDGNVTFRFSWRKNEYLVPVV 318
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+VLKAL++T+D EI + + + DR +++ +Q +L ++
Sbjct: 319 MVLKALVETNDREIFDGIVAA----------DTSNSFLTDRLELLLRTYKQYNLHSQKST 368
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ + S V + VLK V VHL DN DKF LL+F ++KL++LV G
Sbjct: 369 LAYLGDKFRVAFGATPDVSDIDVGREVLKRIVLVHLPDNADKFRLLLFSIRKLYTLVAGD 428
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGT---FDFSEIFVVKK 237
DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K ++ G +F++ + +
Sbjct: 429 CAPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKMQISSDIGRGVRVNFNDRKYMSR 488
Query: 238 CFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGA 297
F +T I ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VHRG+
Sbjct: 489 VFMRT-NENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHRGS 547
Query: 298 SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKI 357
FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I + D +
Sbjct: 548 FFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCQIAT------KASDVSAV 601
Query: 358 KISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA-HIRELKVS 416
++ + V P P + V LDG IVG S E +IVA +R KV
Sbjct: 602 PAALARLGVS-------PAHTFAAGPGLCCVHLDGKIVGWT-SHEQGRIVADSLRLWKVQ 653
Query: 417 SSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P DLE+GYVP S G YPGLYLF SR +RP + + L E D++GPFEQV
Sbjct: 654 GLHNLPKDLEIGYVPPSSKGQYPGLYLFGGHSRMMRPAKYLP-LDKE----DILGPFEQV 708
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
+M I TH E PT +LS++AN TP+SD NQSPRNMYQCQM KQTM
Sbjct: 709 YMNIAVTPA----EIEENVHTHVEFAPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTM 764
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
+ HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++YTGYDM+DA
Sbjct: 765 GTPGVALVHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAVVAVISYTGYDMDDA 824
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----KSKLDSDGLP 651
MI+NKS+ ERG +G +Y+ E VDL+ R DP ++ F + E K KLD DGLP
Sbjct: 825 MIINKSADERGFGYGTVYKVEKVDLSLSRRRGDPITQHFGFGSDEWPETWKEKLDDDGLP 884
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRH 709
+G + +P + ++ + T SEP Y++ V + D + Q++ I++R
Sbjct: 885 LIGVKVEEGDPIVAYFDETLGKTKIKTYHSSEPAYIEEVKLLADDTGDSECQQITIKYRV 944
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
R P+IGDKFSSRHGQKGVCS+ WP VDMP+ +G++PD+IINPHAFPSRMTI M +ES
Sbjct: 945 TRAPLIGDKFSSRHGQKGVCSRKWPTVDMPYS-ESGIQPDVIINPHAFPSRMTIGMFVES 1003
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K G+LHG ++TP++ S +D+ + D G+ L+ G+NYHG E +YSGV
Sbjct: 1004 LAGKAGALHGIAQDSTPWKFS--EDDTPA-------DFFGEQLKLAGYNYHGNEPMYSGV 1054
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP GEMERD
Sbjct: 1055 TGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGGIRVGEMERD 1114
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKK 949
+L+ HG AYLL DRL SDY +C CGS+L T P+ IG L
Sbjct: 1115 ALIGHGTAYLLQDRLLNSSDYAQTPICRSCGSLLNTQMSVPR------IGSL------AS 1162
Query: 950 VICHACQ------TSKG----------------------METVAMPYVFRYLAAEFAAMN 981
V C +C KG TVA+P+V +YL +E AM
Sbjct: 1163 VKCRSCADKLETYIKKGEYVNEADIWEDGSGTKFVGGADTTTVAIPFVLKYLDSELTAMG 1222
Query: 982 IKM 984
IKM
Sbjct: 1223 IKM 1225
>G3T0E9_LOXAF (tr|G3T0E9) DNA-directed RNA polymerase OS=Loxodonta africana
GN=LOC100675596 PE=3 SV=1
Length = 1137
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1004 (44%), Positives = 589/1004 (58%), Gaps = 73/1004 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S++ + L+YL N + L F + + LP+G
Sbjct: 190 IAMIRPKWKSRGLGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLG 249
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L K + V R++ EE T+ Q
Sbjct: 250 FALKALVSFSDYQIFQELIR------GKEDDSFFRNSVSQMLRIVTEE----GCSTQKQV 299
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
LNY+GE F+ L + + A+ + + +HL+ N +KF +L M +KLF+L G
Sbjct: 300 LNYLGECFRVKLNLPEWYPNEQAAEFLFDQCICIHLNSNTEKFYVLCLMTRKLFALAKGE 359
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ +NPDSL NQEVL PG L ++LKEK+E WL S K + +K+ + S + K F
Sbjct: 360 CMEENPDSLMNQEVLTPGQLFLMFLKEKMEAWLVSIKIAIDKKAQKINLSINTENLMKIF 419
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA F
Sbjct: 420 NM--GTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADF 477
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 478 AKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPA------ 531
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELK--V 415
+L + G+T P P P E VLLDG +VG + I +R K V
Sbjct: 532 ----LLCNLGVT---PVDGAPHRPHSECYPVLLDGVMVGWVEKDLAPGIAESLRRFKKQV 584
Query: 416 SSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
IP +EV +P++ YPGL+LFT+P R VRPV+N+ + E LIG E
Sbjct: 585 LREKRIPPWMEVALIPMTGKPNLYPGLFLFTTPCRLVRPVQNLELGKEE-----LIGTME 639
Query: 475 QVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM-A 532
QVFM I D G TH+E+ P +LSV+A+ P+SDHNQSPRNMYQCQM
Sbjct: 640 QVFMNIAIFEDEVFAGV-----TTHQELFPHSLLSVIASFIPFSDHNQSPRNMYQCQMVG 694
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYD
Sbjct: 695 KQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYD 754
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGL 650
MEDAMI+NK+S ERG HG +Y++E +DL+E+ + D S K + KLD DGL
Sbjct: 755 MEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGL 814
Query: 651 PHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRF 707
P +G ++ +PY S N +T + K E VD + V D + K + V I
Sbjct: 815 PFIGAQLQYGDPYYSYLNLNTGENFVVYYKSKENCVVDNIKVCSNDTGSGK-FKCVCITM 873
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+
Sbjct: 874 RVPRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLI 932
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
ES+A K +LHG +ATPF S E S L + G+ML+ G+N++G E LYS
Sbjct: 933 ESMAGKSAALHGLCHDATPFIFS-------EENSAL--EYFGEMLKAAGYNFYGTERLYS 983
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
G+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEME
Sbjct: 984 GISGLELKADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVQGGIRFGEME 1043
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1044 RDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSA 1092
Query: 948 ---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C C S ++TV++PYVFRY AE AAMNI++ L +
Sbjct: 1093 MRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIRVKLDV 1136
>L8GCB6_GEOD2 (tr|L8GCB6) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_04700 PE=3 SV=1
Length = 1193
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1049 (42%), Positives = 610/1049 (58%), Gaps = 113/1049 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT A +IR VR DQ+S T L+YL + + F + E+L+PV
Sbjct: 195 MAIIRPSFEGRGPTYTKFATLIRSVRPDQTSQTNVLHYLDDGNVTFRFSWRKNEFLVPVM 254
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
+++KAL++T+D EI +L G G+ G + DR +++ + L+T+
Sbjct: 255 MIMKALVETNDREIFEDLVG--------GAGSKGANNTFLTDRVELLLRTYKAYGLYTKS 306
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQ 171
+ Y+GE F+ +L N S V L+ V HL + + DKF +L+FM++
Sbjct: 307 KTRAYLGEKFRIVLQVPDNMSDYDVGTEFLRKIVMPHLGNVDVTEVQDADKFQMLLFMIR 366
Query: 172 KLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTF 227
KL+SLV G LDNPD++QNQE+LL G L + +KE+L+DWL + G E R++
Sbjct: 367 KLYSLVAGDCSLDNPDAVQNQEILLGGFLYGMIIKERLDDWLSTALRLGLREYTRRNPAN 426
Query: 228 DFSEIFVVK----KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNY 283
+F+ +K K F +T A+ ++E + TG L++ TGLDLQQ +G+TV A+++N+
Sbjct: 427 NFASPEFLKDFPTKIFGRT-NEAVGQALEYFMSTGNLISPTGLDLQQTSGFTVVAEKINF 485
Query: 284 LRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITS 343
LRF+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C+I +
Sbjct: 486 LRFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCKILT 545
Query: 344 YFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEV 403
+ G++ + VD G+ E + V+LDG I+G +
Sbjct: 546 HGVDAGALPS----------LAVDLGVVGFSSA----STDESVVVMLDGKILGWCTPKQS 591
Query: 404 EKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
+I +R KV + +P +LE+ YVP S GG YPG+YL+T PSR VRPV+ + L E
Sbjct: 592 LRIADTLRFWKVEGTHNVPVELEIAYVPASHGGQYPGVYLYTGPSRMVRPVKYLP-LDKE 650
Query: 464 NKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
D +GP EQ FM I + S TH E PT +LS++AN TP+SD NQSP
Sbjct: 651 ----DWVGPLEQPFMSIAVTEQ----EIDSGETTHVEFDPTNILSILANMTPFSDFNQSP 702
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM +++R D K Y LQT QTPIVR + Y D +P G NA+V
Sbjct: 703 RNMYQCQMGKQTMGTPGTALRYRTDNKSYRLQTGQTPIVRAPLHNDYGFDNFPNGFNAVV 762
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTE-QGSRSDPS-SRMFR----- 636
AV++YTGYDM+DAMI+NKS+ ERG HG IY+ + +L E Q SRS S++F
Sbjct: 763 AVISYTGYDMDDAMIINKSAHERGFGHGTIYKVKKYELDEGQKSRSAKKVSKLFGFAPGG 822
Query: 637 --KSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKKKGSEP 684
KS K+ +D DGLP VG++++ +P C+ + +T + TH K K E
Sbjct: 823 LVKSEW-KALIDEDGLPFVGRLVKEGDPVCAWHTVTTDANGKLVNRDGITHFEKYKEGEM 881
Query: 685 VYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+V+ V V + Q ++++FR PR+P IGDKFSSRHGQKGVCSQ WP DMPF
Sbjct: 882 TFVEEVRVIGSENGNEPAQMISVKFRVPRSPTIGDKFSSRHGQKGVCSQKWPAGDMPFS- 940
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR + G
Sbjct: 941 ESGMQPDIIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFRFDEENTAG------ 994
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
+ G L + G+NYHG E +YSG+ G+EL +I++G VYYQRLRHMV+DKFQVR+TG
Sbjct: 995 ---NYFGHQLMKAGYNYHGNEPMYSGITGEELHADIYVGLVYYQRLRHMVNDKFQVRTTG 1051
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
+ +T QP GEMERDSLLAHG A+LL DRL CSDY + VC CG+
Sbjct: 1052 PITALTGQPIKGRKKGGGIRVGEMERDSLLAHGTAFLLQDRLLNCSDYTRSWVCKGCGTF 1111
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKKVI-CHACQTS--------------------KGM 961
L+ +QP + PRK V+ C C G
Sbjct: 1112 LS---VQPT------VSAFAPRKKGTGVVRCRRCAVKVDGFVADGEVWEDGEGQRWVGGE 1162
Query: 962 ET--VAMPYVFRYLAAEFAAMNIKMTLKL 988
ET VA+P V +YL E AAM I + +
Sbjct: 1163 ETTVVAVPGVLKYLDVELAAMGIMLKYNI 1191
>F7FRH7_ORNAN (tr|F7FRH7) DNA-directed RNA polymerase OS=Ornithorhynchus anatinus
GN=POLR1B PE=3 SV=2
Length = 1050
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1006 (44%), Positives = 587/1006 (58%), Gaps = 80/1006 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + +++ + L+YL N + + F + + LP+G
Sbjct: 106 IALIRPKWKSRGPGYTHFGVSMHCVRDEHTAINMNLHYLENGTVMVNFIYQKELFFLPLG 165
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGK--GAVGTQRVDDRARMIIEEVRQLSLFTRL 118
LKAL+ SD +I L KG+ + V RM++EE T+
Sbjct: 166 FALKALVGFSDHQIFQELI--------KGREDNSFYKNCVSQMLRMVMEE----GCTTQK 213
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVD 178
Q LNY+GE F+ L + + A+ +L + +HL N +KF +L M +KLF+
Sbjct: 214 QVLNYLGERFRIKLNLPEWYRNEQAAEFLLNQCICIHLKSNTEKFYMLCLMTRKLFAFAK 273
Query: 179 GTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK---DEMKRKSGTFDFSEIFVV 235
G + ++ DSL NQEVL PG L ++LKEKLE WL S K D+ +K+ SE +
Sbjct: 274 GECMEESSDSLMNQEVLTPGQLFLMFLKEKLEAWLVSVKIAFDKRAQKTNISLNSENLM- 332
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
K F ++ E +L TG L + TGL + Q G V AD+LN++R+LSHFR VHR
Sbjct: 333 -KVFSM--GLDLTRPFEYLLATGSLRSKTGLGMLQDVGLCVVADKLNFIRYLSHFRCVHR 389
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF 355
GA+FA +RTT+VR+LLPESWGFLCPVHTPDGEPCGL+NHMT C I + ++
Sbjct: 390 GAAFAKMRTTSVRRLLPESWGFLCPVHTPDGEPCGLMNHMTAVCEIVTQVAYTPTLPA-- 447
Query: 356 KIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
+L G+T P P P + V+LDG ++G + I +R
Sbjct: 448 --------LLCSLGIT---PVDGAPSQPYRDCYPVVLDGVVMGWVEKDLAPGIADSLRNF 496
Query: 414 KVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGP 472
KV IP +EV +P++ YPGL+LFT+P R +RPVRN+ + E IG
Sbjct: 497 KVLGEKKIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRMIRPVRNLDLGKEE-----FIGT 551
Query: 473 FEQVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
EQ FM I + P TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQ
Sbjct: 552 LEQTFMNIAIFE------DEIVPGITTHQELFPHSMLSVVANFIPFSDHNQSPRNMYQCQ 605
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQTM F T + R+D KLY L +PQ+P+VR Y Y +D YP GTNA+VAV++YTG
Sbjct: 606 MGKQTMGFPLNTYRERSDNKLYRLHSPQSPLVRPYMYDYYEMDNYPIGTNAVVAVISYTG 665
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSD 648
YDMEDAMI+NKSS ERG HG +Y+TE VDL+++ + D K + KLD D
Sbjct: 666 YDMEDAMIVNKSSWERGFAHGTVYKTERVDLSDKIKQGDDCLVFGVKPGDSRVAHKLDDD 725
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNI 705
GLP++G +++ +P+ S N +T + K E VD + V D N K + + I
Sbjct: 726 GLPYIGAVLQYGDPFYSYVNLNTGESFVTYYKSKEDCVVDNIKVCGNDTGNGK-FKCICI 784
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI M
Sbjct: 785 TMRIPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMMPDILFNPHGFPSRMTIGM 843
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
L+ES+A K +LHG +ATPF S E S LD G ML+ G+N++G E L
Sbjct: 844 LIESMAGKSAALHGVCHDATPFTFS-------EENSA--LDYFGNMLKSAGYNFYGTEKL 894
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGE
Sbjct: 895 YSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNVQGGIRFGE 954
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERD+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP
Sbjct: 955 MERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSW 1003
Query: 946 AP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ +K C C+ S +ETV++PYVFRY AE AAMNIK+TL +
Sbjct: 1004 SAMRNRKYNCTVCRQSDTIETVSVPYVFRYFVAELAAMNIKVTLDI 1049
>M3ZZW5_XIPMA (tr|M3ZZW5) DNA-directed RNA polymerase OS=Xiphophorus maculatus
GN=POLR1B PE=3 SV=1
Length = 1134
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/997 (43%), Positives = 592/997 (59%), Gaps = 75/997 (7%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + + CVR + S++ + L+YL N + L F + + LP+G LK
Sbjct: 195 RPKWKSRGQGYTQYGISLHCVREEHSAINMNLHYLENGTVMLNFIYQKEMFFLPLGFALK 254
Query: 65 ALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
AL+D +D +I L K + + K V + RM+ EE TR + L+Y
Sbjct: 255 ALVDFTDFQIYQELIKGSEDNSFYK-------TCVSEMLRMVSEE----GCTTRSKLLDY 303
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+GE F+ L+ + + + A +L + + +HL + +KF LL F +KLFS +
Sbjct: 304 LGERFRVKLSVPEWYTNEQCANFLLNECLCIHLKSDLEKFYLLCFSTRKLFSFAKQECME 363
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSG--TFDFSEIFVVKKCFDK 241
+NPDSL QEVL PG L ++LKE+L WL S K ++ T + S V+K
Sbjct: 364 ENPDSLMCQEVLTPGQLYLMFLKERLTAWLTSVKLSFDKRGSKLTGELSTENVMKLL--- 420
Query: 242 TPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFAG 301
T ++ E +L TG L + TGL + Q G V AD+LN++R+LSHFR VHRGA+FA
Sbjct: 421 TMGSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK 480
Query: 302 LRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI---TSYFDSQGSIKDYFKIK 358
+RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT +C + T+Y
Sbjct: 481 MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEVVTATAY-------------T 527
Query: 359 ISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
++ +L G+T P PG + V+LDG +VG + + + +R KV
Sbjct: 528 TALPTLLCSLGVT---PVDGSPGQAFSDCYPVVLDGSVVGWVEADLAPSVADSLRRFKVL 584
Query: 417 SSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
+P E+ VP + + YPGL+LFT+ R +RPV+N+++ E LIG FEQ
Sbjct: 585 GQKKVPPWTEIVLVPKTGKPSLYPGLFLFTTLCRMMRPVQNLALGKQE-----LIGTFEQ 639
Query: 476 VFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQT 535
+++ + G +TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM KQT
Sbjct: 640 LYLNV----GILEAEIEPGVSTHQELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQT 695
Query: 536 MAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMED 595
M F + R+D KLY LQTPQ+ +VR Y YN+D YP+GTNA+VAV++YTGYDMED
Sbjct: 696 MGFPLHSFTDRSDNKLYRLQTPQSALVRPYMYDHYNLDNYPSGTNAVVAVISYTGYDMED 755
Query: 596 AMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-KSKLDSDGLPHVG 654
AMI+NKSS ERG HG IY+TE VDL E+ D + + + KLD+DGLPH+G
Sbjct: 756 AMIVNKSSWERGFAHGSIYKTELVDLAEKVKGEDGVVFGAKPGDPKVNGKLDADGLPHIG 815
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHPRN 712
+++ +P+ S N +T ++ + E VD + V + ++V I R PRN
Sbjct: 816 SVLQYGDPFYSYINLNTGQSYVSFYRSQEACVVDNIKVCSNDTGSGLFKRVCITVRVPRN 875
Query: 713 PVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAA 772
P+IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A
Sbjct: 876 PMIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMSPDILFNPHGFPSRMTIGMLIESMAG 934
Query: 773 KGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGK 832
K ++HG +ATPF S + L+ G+MLR G+NY+G E LYSG+ G+
Sbjct: 935 KSAAMHGLSHDATPFTFSEQNSA---------LEYFGEMLRAGGYNYYGTERLYSGLSGQ 985
Query: 833 ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLL 892
EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LL
Sbjct: 986 ELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPLGGRNVQGGIRFGEMERDALL 1045
Query: 893 AHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KK 949
AHG+++LL DRL CSD +A VC CGS+L+ +P PP + +K
Sbjct: 1046 AHGSSFLLQDRLFNCSDRSVAQVCVDCGSLLSPLLEKP-----------PPFWSAMRHRK 1094
Query: 950 VICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
+C C S +++V++PYVFRY AE AAMNIK+ L
Sbjct: 1095 TVCSLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKL 1131
>C3YW52_BRAFL (tr|C3YW52) DNA-directed RNA polymerase OS=Branchiostoma floridae
GN=BRAFLDRAFT_223894 PE=3 SV=1
Length = 1140
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1004 (44%), Positives = 593/1004 (59%), Gaps = 71/1004 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR S+ R + YT+ V +RCV DQ++ T+ L+YL N + L F K ++ +P+
Sbjct: 189 MAIVRPSWKGRGKLYTEYGVSMRCVTKDQTAATIVLHYLTNGTVTLCFVYKKEQFFVPLI 248
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
I+LKAL++T+D I + L E KG V + ++ + + L T+
Sbjct: 249 IILKALVETTDQHIYSELIKG-KEDNSFFKGCVAS---------MLRQAQNEGLMTQAGI 298
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L YIGE F+ L + + V + +L+ V +HLD ++DKFN L+ M QKLF+L G
Sbjct: 299 LKYIGERFRVKLPVPDWYTDEEVGQFLLRQCVCIHLDSDWDKFNTLVLMTQKLFALAKGE 358
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL---QSGKDEMKRKSG---TFDFSEIF- 233
++N DS QE+LL GHL LK+KLE WL + G D+ + G D E+
Sbjct: 359 CSVENQDSPMMQEMLLAGHLYLTILKDKLELWLTQLRYGIDKRSQDKGPSYKLDTVEMMS 418
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
++ C D ++ +E+ + TG +V+ + L L Q AG TV AD+LN++R+LSHFR V
Sbjct: 419 AMRLCSD------VTRGMEHFMATGSVVSKSNLGLMQTAGLTVVADKLNFMRYLSHFRCV 472
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRGA FA +RTT+VRKLLPE+WGFLCPVHTPDG PCGLLNHMT +C + +
Sbjct: 473 HRGAFFAEMRTTSVRKLLPEAWGFLCPVHTPDGAPCGLLNHMTASCEAVTLQPT------ 526
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPP-EVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
+ I +L GM L P PP + TVLLDG +VG + + + +R
Sbjct: 527 ----TVHIPKLLCSLGMAPLDSPA--PAPPVDCYTVLLDGRVVGRVAANMAPDMARKLRM 580
Query: 413 LKVSSSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
LKV+ IP E+ VP + +PGL+LFT+P+R +RPVRN+ +++IG
Sbjct: 581 LKVTREGKIPVMTEIVLVPKTGKASQFPGLFLFTTPARMMRPVRNLF-----TGTVEMIG 635
Query: 472 PFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
FEQV+M I C P+ G TH+E+ T +LSV A+ TP+SD NQSPRNMYQC
Sbjct: 636 SFEQVYMNI-CVRPEEAHPGV-----TTHQELRETSILSVAASFTPFSDFNQSPRNMYQC 689
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QM KQTM HR D KLY +Q PQ+P VR Y Y++D+YP GTNA+VAV++YT
Sbjct: 690 QMGKQTMGTPLHAFGHRTDNKLYRIQNPQSPTVRPYAYDHYHMDDYPLGTNAVVAVISYT 749
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQG-SRSDPSSRMFRKSNIEK---SKL 645
GYDMEDAMILNKSS+ERG HG IY+TE + L + S P + +F + +K +L
Sbjct: 750 GYDMEDAMILNKSSLERGFGHGTIYKTEIISLRDLAQSARGPVTLVFGCAEGDKRVEGRL 809
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKV 703
D DGLP +G + +P+ S + T + K E VD + V + + D+ KV
Sbjct: 810 DDDGLPPIGSKLETGDPFYSYVDKQTGEARVVLYKNQEKAIVDNIKVLGNDQGTSDMNKV 869
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I R RNP+IGDKFSSRHGQKGVCSQ WP DMPF GM PD+I NPH FPSRMTI
Sbjct: 870 AIVMRINRNPIIGDKFSSRHGQKGVCSQQWPVEDMPFT-EGGMTPDIIFNPHGFPSRMTI 928
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
M++ES+A K + HG +ATPF + +DN +D G+ML E G+NY+G E
Sbjct: 929 GMMIESMAGKSAAQHGLCHDATPF--TFSEDNSA-------IDYYGRMLIEAGYNYYGHE 979
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
+YSGV G E +IFIG VYYQRLRHMV+DKFQVR+TG +D VT QP F
Sbjct: 980 RMYSGVTGVEFEADIFIGVVYYQRLRHMVADKFQVRTTGPIDIVTHQPIKGRKRAGGIRF 1039
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPP 943
GEMERDSLLAHGA +LL DRL CSD VC+ CGS+L+ +P +P
Sbjct: 1040 GEMERDSLLAHGATFLLQDRLFNCSDKSTCRVCTQCGSILSPLLDKPLLF-----CSVPQ 1094
Query: 944 RKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLK 987
+ + C S + +A+PYVFRYL AE AAMNIK+T++
Sbjct: 1095 CRVFCTLCCSNSVFSPPPQLIAVPYVFRYLVAELAAMNIKVTME 1138
>K7F379_PELSI (tr|K7F379) DNA-directed RNA polymerase (Fragment) OS=Pelodiscus
sinensis GN=POLR1B PE=3 SV=1
Length = 1092
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/1004 (43%), Positives = 585/1004 (58%), Gaps = 74/1004 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT+ + + CVR + +++ + L+YL N + L F + + LP+G
Sbjct: 148 IAMIRPKWKSRGPGYTEYGISMHCVRDEHTAINMNLHYLENGTVMLNFIFQKELFFLPLG 207
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L + + + R+++EE T+ Q
Sbjct: 208 FALKALVGFSDYQIFQELIR------GREDNSFYKNCISQMLRLVMEE----GCATQKQV 257
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L+Y+G+ F+ L + + A+ +L + +HL +KF LL M +KLF+
Sbjct: 258 LDYLGKCFRVKLNLPEWYPNEQAAEFLLDQCICIHLKTKSEKFYLLCLMTRKLFAFAKEE 317
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKCFD 240
+ DNPDSL NQEVL PG L ++LKE++E WL S K +++++ + + + +
Sbjct: 318 CMEDNPDSLINQEVLTPGQLYLMFLKERMEAWLLSLKVALEKRAQK---TNVTINSENMM 374
Query: 241 KTPARAISTS--IENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGAS 298
K + I + E +L TG L + TGL + Q +G V AD+LN++R+LSHFR VHRGA+
Sbjct: 375 KLFSMGIDVTRPFEYLLATGNLRSKTGLGMLQDSGLCVVADKLNFVRYLSHFRCVHRGAA 434
Query: 299 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIK 358
FA +RTTTVRKLLPESWGFLCPVHTPDGEPCGL+NH+T C I ++
Sbjct: 435 FAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHITAVCEIVTH-------------S 481
Query: 359 ISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
L + + P P P E V LDG +VG + I +R KV
Sbjct: 482 AYTLSLPPLLCSLGVTPVDGTPSQPYAECYPVTLDGSLVGWVEKDMAPTIADTLRHFKVM 541
Query: 417 SSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
I EV +P++ YPGL++FT+P R +RPVRN+++ E LIG EQ
Sbjct: 542 KEKKITAWTEVVLIPMTGKPSLYPGLFIFTTPCRMIRPVRNLALGKEE-----LIGTLEQ 596
Query: 476 VFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
VFM I + P TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM K
Sbjct: 597 VFMNIAVLE------DEIVPGVTTHQELFPHSMLSVVANLIPFSDHNQSPRNMYQCQMGK 650
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNA+VAV++YTGYDM
Sbjct: 651 QTMGFPLLTYQERSDNKLYRLQTPQSPLVRPYMYDYYDMDSYPIGTNAVVAVISYTGYDM 710
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLP 651
EDAMI++K+S ERG HG +Y+TE++DL E+ + D K + LD+DGLP
Sbjct: 711 EDAMIVSKASWERGFAHGSVYKTESIDLAEKIKQGDDCLVFGVKPGDPRVTQNLDADGLP 770
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFR 708
H+G +++ +P+ N ST + K E VD + V D N K + V I R
Sbjct: 771 HIGSILQYGDPFYGYLNLSTGESFVTYYKSKESCIVDNIKVCSNDSGNGK-FKSVCITMR 829
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+E
Sbjct: 830 IPRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIE 888
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K +LHG +ATPF S E S L+ G+ML+ G+NY+G E +YSG
Sbjct: 889 SMAGKSAALHGLCHDATPFTFS-------EESSA--LEYFGKMLKAAGYNYYGTERMYSG 939
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMER
Sbjct: 940 ISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMER 999
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP- 947
D+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1000 DALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAM 1048
Query: 948 --KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+K C C S ++TVA+PYVFRY AE AAMNIK+ L +N
Sbjct: 1049 RNRKYYCTLCNQSDTIDTVAVPYVFRYFVAELAAMNIKVRLNVN 1092
>K7F378_PELSI (tr|K7F378) DNA-directed RNA polymerase OS=Pelodiscus sinensis
GN=POLR1B PE=3 SV=1
Length = 1092
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1004 (43%), Positives = 590/1004 (58%), Gaps = 74/1004 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT+ + + CVR + +++ + L+YL N + L F + + LP+G
Sbjct: 148 IAMIRPKWKSRGPGYTEYGISMHCVRDEHTAINMNLHYLENGTVMLNFIFQKELFFLPLG 207
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL+ SD +I L + + + R+++EE T+ Q
Sbjct: 208 FALKALVGFSDYQIFQELIR------GREDNSFYKNCISQMLRLVMEE----GCATQKQV 257
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L+Y+G+ F+ L + + A+ +L + +HL +KF LL M +KLF+
Sbjct: 258 LDYLGKCFRVKLNLPEWYPNEQAAEFLLDQCICIHLKTKSEKFYLLCLMTRKLFAFAKEE 317
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKCFD 240
+ DNPDSL NQEVL PG L ++LKE++E WL S K +++++ + + + +
Sbjct: 318 CMEDNPDSLINQEVLTPGQLYLMFLKERMEAWLLSLKVALEKRAQK---TNVTINSENMM 374
Query: 241 KTPARAISTS--IENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGAS 298
K + I + E +L TG L + TGL + Q +G V AD+LN++R+LSHFR VHRGA+
Sbjct: 375 KLFSMGIDVTRPFEYLLATGNLRSKTGLGMLQDSGLCVVADKLNFVRYLSHFRCVHRGAA 434
Query: 299 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIK 358
FA +RTTTVRKLLPESWGFLCPVHTPDGEPCGL+NH+T C I ++
Sbjct: 435 FAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHITAVCEIVTHS----------AYT 484
Query: 359 ISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVS 416
+S+ +L G+T P P P E V LDG +VG + I +R KV
Sbjct: 485 LSLPPLLCSLGVT---PVDGTPSQPYAECYPVTLDGSLVGWVEKDMAPTIADTLRHFKVM 541
Query: 417 SSAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
I EV +P++ YPGL++FT+P R +RPVRN+++ E LIG EQ
Sbjct: 542 KEKKITAWTEVVLIPMTGKPSLYPGLFIFTTPCRMIRPVRNLALGKEE-----LIGTLEQ 596
Query: 476 VFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAK 533
VFM I + P TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM K
Sbjct: 597 VFMNIAVLE------DEIVPGVTTHQELFPHSMLSVVANLIPFSDHNQSPRNMYQCQMGK 650
Query: 534 QTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDM 593
QTM F T Q R+D KLY LQTPQ+P+VR Y Y++D YP GTNA+VAV++YTGYDM
Sbjct: 651 QTMGFPLLTYQERSDNKLYRLQTPQSPLVRPYMYDYYDMDSYPIGTNAVVAVISYTGYDM 710
Query: 594 EDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK--SKLDSDGLP 651
EDAMI++K+S ERG HG +Y+TE++DL E+ + D K + LD+DGLP
Sbjct: 711 EDAMIVSKASWERGFAHGSVYKTESIDLAEKIKQGDDCLVFGVKPGDPRVTQNLDADGLP 770
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFR 708
H+G +++ +P+ N ST + K E VD + V D N K + V I R
Sbjct: 771 HIGSILQYGDPFYGYLNLSTGESFVTYYKSKESCIVDNIKVCSNDSGNGK-FKSVCITMR 829
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+E
Sbjct: 830 IPRNPTIGDKFASRHGQKGILSRLWPVEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIE 888
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K +LHG +ATPF S E S L+ G+ML+ G+NY+G E +YSG
Sbjct: 889 SMAGKSAALHGLCHDATPFTFS-------EESSA--LEYFGKMLKAAGYNYYGTERMYSG 939
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMER
Sbjct: 940 ISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMER 999
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP- 947
D+LLAHG ++LLHDRL CSD +A VC CGS+L+ +P PP +
Sbjct: 1000 DALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKP-----------PPSWSAM 1048
Query: 948 --KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+K C C S ++TVA+PYVFRY AE AAMNIK+ L +N
Sbjct: 1049 RNRKYYCTLCNQSDTIDTVAVPYVFRYFVAELAAMNIKVRLNVN 1092
>G8ZPY2_TORDC (tr|G8ZPY2) DNA-directed RNA polymerase OS=Torulaspora delbrueckii
(strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 /
NRRL Y-866) GN=TDEL0B05470 PE=3 SV=1
Length = 1196
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/1035 (44%), Positives = 607/1035 (58%), Gaps = 104/1035 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ VR SF+ R Y+ + IRCVR DQ+S T L+YL + F + EYL+PV
Sbjct: 208 MAIVRPSFANRGASYSQYGIQIRCVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVI 267
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR----VDDRARMIIEEVRQL--SL 114
++LKAL DTSD EI G +G+ + DR +++ R+ L
Sbjct: 268 MILKALCDTSDREIF--------------DGIIGSDTKNSFLTDRLELLLTGFRKRYPQL 313
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL + N DKF +++FM++K
Sbjct: 314 KNRRQILQYLGDKFRVVFQASPDKSDYEVGQEVLDRIVLVHLNGESNKDKFFMMLFMIRK 373
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEI 232
L+SLV G DNPD+ Q+QEVLL G L + +KEK+E++LQ+ ++ R S
Sbjct: 374 LYSLVAGECCPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIVAQI-RTDINRGLSTN 432
Query: 233 FVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
F +K + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 433 FKDRKYVSRVLMRVNENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 492
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++
Sbjct: 493 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST------ 546
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
D KI SIL L S +Q + V LDG I+G + S E KI+A
Sbjct: 547 KQSDVSKIP-SILFSLGVSPASQT-----FAAGASLCCVQLDGRIIGWV-SHEQGKIIAD 599
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV +A +P DLE+GYVP S G YPGLY+F SR +RPVR + L E
Sbjct: 600 TLRFWKVEGKTAGLPLDLEIGYVPPSTRGQYPGLYIFGGRSRMMRPVRYLP-LDKE---- 654
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 655 DIVGPFEQVYMNIAVTPQ----ELQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 710
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 711 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGMNAVVAVIS 770
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-----K 642
YTGYDM+DAMI+NKS+ ERG +G +Y+ E +DL+ SR DP S+ F E
Sbjct: 771 YTGYDMDDAMIINKSADERGFGYGTMYKVEKIDLSLNRSRGDPISQHFGFGTDEWPKEWM 830
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK +
Sbjct: 831 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKLPE 890
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 891 LQTVSIKYRIRRVPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDVIINPHAFPS 949
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG +ATP+ +S D G LR G+NY
Sbjct: 950 RMTIGMFVESLAGKAGALHGIAQDATPW---------TFNESDTPADYFGDQLRAAGYNY 1000
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSGV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1001 HGNEPMYSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1060
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG A+LL DRL CSDY VC CG++L T Q +PR IG
Sbjct: 1061 GIRVGEMERDALIGHGTAFLLQDRLLNCSDYTQTSVCRECGAILTTQ----QSVPR--IG 1114
Query: 940 GLPPRKAPKKVI----------------------CHACQTSKGME--------TVAMPYV 969
+ + + I H + +G + TVA+P+V
Sbjct: 1115 SMSSVRCRRCAIKFEDVKKMLNKYQGDESVFIDDSHIWEDGQGNKYVGGGETTTVAIPFV 1174
Query: 970 FRYLAAEFAAMNIKM 984
+YL +E AAM I++
Sbjct: 1175 LKYLDSELAAMGIRL 1189
>Q6PCJ2_XENLA (tr|Q6PCJ2) DNA-directed RNA polymerase OS=Xenopus laevis GN=polr1b
PE=2 SV=1
Length = 1134
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/1006 (43%), Positives = 591/1006 (58%), Gaps = 79/1006 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT + IRCV+ + +++ + L+YL N S + F + + +P+G
Sbjct: 191 IAMIRPKWKNRGPGYTQYGISIRCVQDEHTAVNMNLHYLENGSVMVNFIYQKELFFIPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
LKAL++ SD +I T L KGK R + R+++EE +
Sbjct: 251 FALKALVEFSDYQIFTELI--------KGKEDNSFYRDCMTQMLRVVVEE----GCHNQK 298
Query: 119 QCLNYIGEHFQP--ILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
L Y+GE F+ L E D + A+ ++ + +HL N +KF +L M QKLF+
Sbjct: 299 NVLKYLGERFRVKFYLPEWYTD--EQAAEFLISHCICIHLKTNVEKFYMLCMMTQKLFTF 356
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM-KRKSGTFDFSEIFVV 235
+ +NPDSL QEVL PG L+ ++LKEK+E WL K + KR D + +
Sbjct: 357 AKDGCMEENPDSLMYQEVLTPGQLLLMFLKEKMESWLLGVKLNLDKRAHKLVDLTTETMG 416
Query: 236 KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHR 295
K T ++ E +L TG L + TGL + Q +G V AD+LN++R+LSHFR VHR
Sbjct: 417 KIL---TSTSDLTKLCEYLLATGNLRSKTGLGMLQSSGLVVVADKLNFIRYLSHFRCVHR 473
Query: 296 GASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI---TSYFDSQGSIK 352
GA+FA +RTT+VR+LLPESWGFLCPVHTPDGEPCGL+NHMT C I TSY
Sbjct: 474 GAAFAKMRTTSVRRLLPESWGFLCPVHTPDGEPCGLMNHMTAACEIVTQTSY-------- 525
Query: 353 DYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRE 412
S+ +L GMT V + V+LDG +VG + + +V +R
Sbjct: 526 -----NTSLPLLLCSLGMTP-VDGAAGKSFADCYPVMLDGAMVGWVENNVAPGLVNALRI 579
Query: 413 LKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
KV +P E+ +P++ + YPGL++FT+P R VRP+RN+++ E L+G
Sbjct: 580 YKVKHDKNVPPWTEIVLIPMTGKASLYPGLFVFTTPCRLVRPIRNLALGKEE-----LLG 634
Query: 472 PFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
EQVF+ + +G TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM
Sbjct: 635 TLEQVFLNVAIYEG----EIVPGETTHQELFPHSMLSVVANFIPFSDHNQSPRNMYQCQM 690
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
KQTM F T Q R+D KLY LQTPQ+P+VR S Y Y +D YP GTNAIVAV++YTGY
Sbjct: 691 GKQTMGFPLMTYQDRSDNKLYRLQTPQSPLVRPSMYDYYEMDNYPVGTNAIVAVISYTGY 750
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE--KSKLDSDG 649
DMEDAM+LNKSS ERG HG +Y+T+ VDL+++ + + K + E K +LD+DG
Sbjct: 751 DMEDAMVLNKSSWERGFAHGSVYKTDHVDLSKKLKDGEDNIVFGIKPDDERVKGRLDNDG 810
Query: 650 LPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIR 706
LP VG +++ +PY N +T + K E VD + + D+ K + V I
Sbjct: 811 LPPVGAVLQFGDPYYGYLNFNTGESFVAYYKSKENCVVDNIKICSNDIGFGK-FKSVCIT 869
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML
Sbjct: 870 MRIPRNPTIGDKFASRHGQKGILSRLWPSEDMPFT-ESGMVPDILFNPHGFPSRMTIGML 928
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K +LHG +ATPF S E S L+ G+MLR G+N++G E LY
Sbjct: 929 IESMAGKSAALHGLCHDATPFTFS-------EENSA--LEYFGEMLRAGGYNFYGTEKLY 979
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SG+ G EL +IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEM
Sbjct: 980 SGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNIQGGIRFGEM 1039
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD+LLAHG ++LLHDRL CSD A +C CGS++A +P PP +
Sbjct: 1040 ERDALLAHGTSFLLHDRLFHCSDRSTAHMCVECGSLIAPFLEKP-----------PPSWS 1088
Query: 947 P---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+K C C + +E V++PYVFRY AE AAMNI + L +N
Sbjct: 1089 SIRNRKHQCVVCNRTDTVEAVSVPYVFRYFVAELAAMNINVKLSVN 1134
>H2L5L1_ORYLA (tr|H2L5L1) DNA-directed RNA polymerase OS=Oryzias latipes
GN=LOC101159846 PE=3 SV=1
Length = 1135
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/996 (43%), Positives = 587/996 (58%), Gaps = 68/996 (6%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT V +RCV+ D +++ + L+YL N + L F + + LP+G LK
Sbjct: 195 RPKWKSRGQGYTQYGVSMRCVKDDHTAINLNLHYLENGTVMLNFIYQKELFFLPLGFALK 254
Query: 65 ALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNY 123
AL+D +D +I L K + + K V + R+++EE TR + L Y
Sbjct: 255 ALVDFTDFQIYQELIKGREDNSFYK-------TCVSEMLRVVMEE----GCTTRSKVLTY 303
Query: 124 IGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVL 183
+GE F+ L + + + A +L + + +HL + +KF LL M +KLFS +
Sbjct: 304 LGERFRVKLNLPEWYTNEQCANILLNECICIHLKSDTEKFYLLCLMSRKLFSHAKQECME 363
Query: 184 DNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM-KRKSGTF--DFSEIFVVKKCFD 240
+NPDS+ QEVL PG L ++LKE++ WL S K KR S F +S V+K
Sbjct: 364 ENPDSIMCQEVLTPGQLYLMFLKERMTAWLVSVKLSFDKRGSKVFARGWSTENVIKML-- 421
Query: 241 KTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFA 300
++ E +L TG L + TGL + Q +G V AD+LN++R+LSHFR VHRGA+FA
Sbjct: 422 -NMGSDVTKPFEYLLATGNLNSKTGLGMLQNSGLCVVADKLNFIRYLSHFRCVHRGAAFA 480
Query: 301 GLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYF-KIKI 359
+RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT +C + + S+ + +
Sbjct: 481 KMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEVVAASSPTTSLPALLCSLGV 540
Query: 360 SILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSA 419
+ +D + P V+LDG +VG + + +V +R KV
Sbjct: 541 TPVDGTPAQAFSDCYP------------VVLDGSVVGWVETDLAPAVVDAMRRFKVLRER 588
Query: 420 MIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFM 478
+P E+ VP + + YPGL+LFT+P R +RPV+N+++ E IG FEQ++
Sbjct: 589 KVPPWTEIVLVPKTGKASLYPGLFLFTTPCRMMRPVQNLALGKQE-----FIGTFEQLYT 643
Query: 479 EIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAF 538
+ G + TH+E+ P MLSVVAN P+SDHNQSPRNMYQCQM KQTM F
Sbjct: 644 NV----GILEEEIEAGVTTHQELFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGF 699
Query: 539 SSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMI 598
+ R+D KLY LQTPQ+ +VR Y YN+D YP+GTNAIVAV++YTGYDMEDAMI
Sbjct: 700 PLHSFMDRSDNKLYRLQTPQSALVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMI 759
Query: 599 LNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE-KSKLDSDGLPHVGQMI 657
+NKSS ERG HG IY+TE VDL ++ D + + + KLD+DGLP VG ++
Sbjct: 760 VNKSSWERGFAHGSIYKTELVDLADKVRGEDAVVFGTKPGDPKVNDKLDADGLPRVGSVL 819
Query: 658 RPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVI 715
+ +P+ S N +T + K E VD + + + +++ I R PRNP I
Sbjct: 820 QYGDPFYSYINLNTGQSCVHFYKSQEACVVDNIKICSNDSGSGQFKRICITTRVPRNPTI 879
Query: 716 GDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGG 775
GDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A K
Sbjct: 880 GDKFASRHGQKGILSRLWPAEDMPFT-ESGMTPDILFNPHGFPSRMTIGMLIESMAGKSA 938
Query: 776 SLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELT 835
+LHG +ATPF S E S LD G++LR G+NY+G E LYSGV G+EL
Sbjct: 939 ALHGRSHDATPFTFS-------EENSA--LDHFGELLRAGGYNYYGTERLYSGVSGRELE 989
Query: 836 CEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHG 895
+IFIG VYYQRLRHMVSDKFQVR+TG D+VT QP FGEMERD+LLAHG
Sbjct: 990 ADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPVGGRNIQGGIRFGEMERDALLAHG 1049
Query: 896 AAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---KKVIC 952
+++LLHDRL CSD A +C CGS+L+ +P PP + +K +C
Sbjct: 1050 SSFLLHDRLFNCSDRSEAQMCVDCGSLLSPLLEKP-----------PPCWSAMRHRKTLC 1098
Query: 953 HACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
C S + V++PYVFRY AE AAMNIK+ L++
Sbjct: 1099 TLCGKSDSINAVSVPYVFRYFVAELAAMNIKVKLEV 1134
>B8LZJ7_TALSN (tr|B8LZJ7) DNA-directed RNA polymerase OS=Talaromyces stipitatus
(strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006)
GN=TSTA_093250 PE=3 SV=1
Length = 1264
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/961 (44%), Positives = 581/961 (60%), Gaps = 75/961 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF +R G+T V IR R DQ++ T L+YL + + F + +EYL+PV
Sbjct: 223 MAINRPSFQKRGAGFTTFGVQIRSARPDQTTQTNVLHYLSDGNVTFRFSWRKQEYLVPVM 282
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + + K G T V DR +++ + +++R
Sbjct: 283 MILKALVETNDREIFEGIVGNASTK-----GPANT-FVTDRVELLLRTFKGYKIYSRSDA 336
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+G+ F+P+L +++ L+ V HL + ++DKF L++FM++KL
Sbjct: 337 RAYLGKKFRPVLFAPATWTHEECGAEFLRKIVLPHLGNQNVTTTQDYDKFKLMLFMIRKL 396
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS-GK--DEMKRKSGTFDFS 230
++ V G DNPD++ NQEV+L G++ + LKE+LE+WL S G+ + + G F+
Sbjct: 397 YAFVAGDCAADNPDAISNQEVMLGGYVYGMLLKERLEEWLLSFGRLVRDWSYRGGNLKFT 456
Query: 231 EIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFL 287
+ K K R I ++E L TG LV+ TGLD+QQ +G+TV A+++N+ RF+
Sbjct: 457 DPSFEKDFIGKVIKRTNENIGGALEYFLSTGNLVSPTGLDMQQASGFTVVAEKINFYRFI 516
Query: 288 SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDS 347
+HFR VHRG FA L+TT VRKLLPESWGF+CPVHTPDG PCGLLNH+ C I +
Sbjct: 517 AHFRMVHRGTFFAQLKTTAVRKLLPESWGFMCPVHTPDGSPCGLLNHLAHKCLIAT---- 572
Query: 348 QGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIV 407
S D I + + + S + V E + V L+G +VG + + I
Sbjct: 573 --SDLDVSHIPRVLAQLGIKSEASAEVT--------ESVCVQLNGRVVGYCSPKQAKMIH 622
Query: 408 AHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV S IP +LE+GYVP S GG YPG+Y+ + P+R RPV+ +++ +
Sbjct: 623 DTLRFWKVEGSHDIPKELEIGYVPTSNGGQYPGIYMSSQPARMYRPVKYLAL-----DKL 677
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D +GPFEQ FMEI C + S +TH E PT +LS++AN TP+SD+NQSPRNMY
Sbjct: 678 DYVGPFEQPFMEIACLEED----IRSGLSTHIEFTPTNILSIIANMTPFSDNNQSPRNMY 733
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM+KQTM + +R D KLY LQT QTPIVR Y Y +D +P G NA+VA+LA
Sbjct: 734 QCQMSKQTMGTPGTSFAYRTDNKLYRLQTGQTPIVRPPLYNAYGLDNFPNGANAVVAILA 793
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK-------SNI 640
YTGYDM+DAM++NKSS ERG HG IY+T+ +L ++ SR + S R K S I
Sbjct: 794 YTGYDMDDAMVINKSSHERGFGHGTIYKTKFYNLDDKDSRRNKSKREISKLFGFAPGSEI 853
Query: 641 E---KSKLDSDGLPHVGQMIRPDE----PYCSIYNASTSS-------THTLKKKGSEPVY 686
+ ++ LD DGLPH G I+ Y Y+A + S TH LK K +E Y
Sbjct: 854 KAEYRATLDEDGLPHPGAKIKEGSYVAAWYTVRYDAGSDSYINVDGITHFLKYKDAEEGY 913
Query: 687 VDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTT 744
+D V + + + LQ ++++FR PR P+IGDKFSSRHGQKGVCSQLWP +DMPF +
Sbjct: 914 IDTVRLVGNENGNEPLQAISVKFRVPRRPIIGDKFSSRHGQKGVCSQLWPQIDMPFS-ES 972
Query: 745 GMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLL 804
G++PDLIINPHAFPSRMTIA ++ES+A K G+LHG ++TPF+ S +
Sbjct: 973 GIQPDLIINPHAFPSRMTIAQIIESMAGKAGALHGHPQDSTPFQFS---------EENTA 1023
Query: 805 LDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTV 864
D G LR+ G+NYHG E +YSG+ GKE +I++G V+YQRLRHMV+DKFQVR+TG V
Sbjct: 1024 ADYFGHQLRKAGYNYHGNEPMYSGITGKEFAADIYLGVVHYQRLRHMVNDKFQVRTTGPV 1083
Query: 865 DQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLA 924
+ VT QP GEMERDSLLAHG A+LL DRL CSD A +C CGS L+
Sbjct: 1084 NSVTGQPVKGRSKGGGIRVGEMERDSLLAHGCAFLLQDRLMNCSDSQRAWICRDCGSFLS 1143
Query: 925 T 925
T
Sbjct: 1144 T 1144
>F7VLZ8_SORMK (tr|F7VLZ8) DNA-directed RNA polymerase OS=Sordaria macrospora
(strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
GN=SMAC_04919 PE=3 SV=1
Length = 1239
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1054 (42%), Positives = 603/1054 (57%), Gaps = 115/1054 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR SF R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 210 LAIVRPSFQNRGATYTPYGIIMRSVRPDETSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 269
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++KAL++T+D EI L K V + DR +++ ++ L+++ Q
Sbjct: 270 MIMKALVETNDREIFEGLVGPPQSK------GVANTFLTDRVELLLRTYKKYGLYSKTQT 323
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+G+ F+ +L S V L+ V VHL + DKFN+L+FM +KL
Sbjct: 324 RAYLGQKFRVVLGVADTMSDYEVGTEFLRKIVLVHLGCQDVTEQQDADKFNMLLFMCRKL 383
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL-----QSGKDEMKRKSGTFD 228
++LV G +DNPD++QNQE+LL G L +KE+LE+ L S +D ++R
Sbjct: 384 YALVAGDCAVDNPDAVQNQEILLGGFLYGQIIKERLEELLTVSFRASLRDYLRRNPTVSF 443
Query: 229 FSEIFV--VKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
SE F + I S+E L TG LV+ +GLDLQQ +G+TV A++LN+LRF
Sbjct: 444 QSETFTKDFPIAIFRRANENIGQSLEYFLSTGNLVSPSGLDLQQVSGFTVVAEKLNFLRF 503
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I T +
Sbjct: 504 ISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIMTDHV 563
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D+ + F++ + + + S T E + V+LDG IVG E +
Sbjct: 564 DASTIPRLAFELGV----VNISSAATS-----------ESVVVMLDGRIVGWCTPDECKS 608
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV+ +P LE+GYVP S GG+YPGLY+ + P+R VRPV+ + +
Sbjct: 609 IAETLRYWKVNGENGVPLQLEIGYVPPSNGGSYPGLYMSSQPARMVRPVKYLPLAKE--- 665
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSP 523
D +GP EQ +M I C + + P +TH E PT +LS++AN TP+SD NQSP
Sbjct: 666 --DFVGPQEQPYMSIACTE------QEVIPGDSTHVEFDPTNILSILANMTPFSDFNQSP 717
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM + R D K+Y LQT QTPIVR + Y D +P GTNA+V
Sbjct: 718 RNMYQCQMGKQTMGTPGTALSRRTDNKMYRLQTGQTPIVRAPLHNTYGFDNFPNGTNAVV 777
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS--RMFR---KS 638
AV++YTGYDM+DAMI+NKS+ ERG HG IY+T+ V L + S +MF S
Sbjct: 778 AVISYTGYDMDDAMIINKSAHERGFGHGSIYKTKKVSLKDDSRTRSAKSIVKMFGFAPNS 837
Query: 639 NIEKS---KLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKKKGSEPV 685
I +S LD+DGLP VG+++R + C+ + S TH + K SE
Sbjct: 838 TIRESTRDTLDNDGLPRVGRLLREGDVLCAWHTVSADYNGQLVNRDGITHYERYKDSEDA 897
Query: 686 YVDYVAVDVKNK--KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGT 743
+V+ V V + + LQ V+I+ R PR+PVIGDKFSSRHGQKGVCSQ WP DMPF
Sbjct: 898 FVEEVRVIGADNGTEPLQTVSIKLRIPRSPVIGDKFSSRHGQKGVCSQKWPATDMPFS-E 956
Query: 744 TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGL 803
TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ E ++G
Sbjct: 957 TGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFD------EQNRAG- 1009
Query: 804 LLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT 863
D G L + G+NYHG E LYSG+ G+E +I+IG VYYQRLRHMV+DK+QVR+TG
Sbjct: 1010 --DYFGHQLMKAGYNYHGNEPLYSGITGEEFQADIYIGVVYYQRLRHMVNDKYQVRTTGP 1067
Query: 864 VDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 923
V T QP GEMERD+LLAHG ++LL DRL CSDY + +C CGS L
Sbjct: 1068 VVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTSFLLQDRLLNCSDYSKSWMCRQCGSFL 1127
Query: 924 ATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT-------------------------- 957
+T QP P IG RKA V C C T
Sbjct: 1128 ST---QPTVSPF--IG---KRKAVSTVRCRNCATRLDDMEDVDLMQLDGEIWEDGSGTQW 1179
Query: 958 --SKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+ VA+P +YL E AAM IK+ K++
Sbjct: 1180 VGGENTTVVAVPGALKYLDVELAAMGIKLKYKVD 1213
>C4JFY6_UNCRE (tr|C4JFY6) DNA-directed RNA polymerase OS=Uncinocarpus reesii
(strain UAMH 1704) GN=UREG_01066 PE=3 SV=1
Length = 1243
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1072 (41%), Positives = 609/1072 (56%), Gaps = 125/1072 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +RNSF++R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRNSFTKRGATYTKYGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRL 118
++LKALI+T+D EI E+ +G++G + V DR +++ + + +R
Sbjct: 275 MILKALIETNDREI--------FERLVGREGSLGMKNTFVTDRMELLLRTYKAYGVHSRS 326
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQ 171
+C Y+GE F+ +L +N + V L+ V HL + + DKFN+++F+++
Sbjct: 327 KCRAYLGEKFRYVLGMSENVPDEDVGTEFLRKIVLPHLGNQNVTESQDNDKFNMILFIIR 386
Query: 172 KLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTF 227
KL++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S +D + G
Sbjct: 387 KLYTLVAGDCAPDNPDAVSNQEVLLGGFLYGMILKERLEEWLRSIGPIARDWSNKNLG-L 445
Query: 228 DFSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
F++ K + AR I ++E L TG LV+ TGLDLQQ +GYT+ A+++N+
Sbjct: 446 PFTDARFEKDFISRIVARTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTIMAEKINFY 505
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I +
Sbjct: 506 RFISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLIATS 565
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
+ + + +SIL + +S + + V LDG IVG +
Sbjct: 566 NLNVAGVPEV----LSILGVGSESSSSTEE----------SVAVSLDGRIVGYCSPKQAR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LEVGYVP S GG YPG+YLF+ +R RPV+ + +
Sbjct: 612 VISDTLRHWKVEGHPKIPVELEVGYVPNSNGGQYPGVYLFSQCARMYRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+D +GPFEQ FMEI C P G +TH E PT +LS++AN TP+SD NQSP
Sbjct: 667 DKLDYVGPFEQPFMEIACVPSDIMSG-----ISTHVEFDPTHILSILANMTPFSDFNQSP 721
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQ M +I +R D KLY LQT QTPI R Y Y +D +P G NA+V
Sbjct: 722 RNMYQCQMGKQAMGTPGTSIDYRTDNKLYKLQTGQTPIARPPLYNAYGLDNFPNGMNAVV 781
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FR 636
AV++YTGYDM+DAMI+NKS+ ERG +G IY+T+ L ++ +R S+ F
Sbjct: 782 AVISYTGYDMDDAMIINKSAHERGFGYGTIYKTKIYPLDDKEARGRGKSKREIKKLFGFA 841
Query: 637 KSNIEKS----KLDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKG 681
+ K+ +L DGLPHVG ++ +P Y TH LK K
Sbjct: 842 PGGLVKAEWRNQLGEDGLPHVGGRVKDGDLVAAWHTVQYDPAAETYLNVDKETHFLKYKD 901
Query: 682 SEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMP 739
+E Y+D + + + Q ++I++R PR P+IGDKFSSRHGQKGVCSQLWP VDMP
Sbjct: 902 AEEGYIDSIRILGSETGNEPCQAISIKYRIPRKPIIGDKFSSRHGQKGVCSQLWPAVDMP 961
Query: 740 FCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE 799
F +G++PD+IINPHAFPSRMTI M +ES+A K G+LHG + TPF+ S + G
Sbjct: 962 FS-ESGIQPDIIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDCTPFQFSEEYTAG--- 1017
Query: 800 KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVR 859
D G+ LR+ G+N+HG E +YSGV G+E +I++G VYYQRLRHMV+DKFQVR
Sbjct: 1018 ------DHFGEQLRKAGYNFHGNEPMYSGVTGREFAADIYLGVVYYQRLRHMVNDKFQVR 1071
Query: 860 STGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 919
+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C C
Sbjct: 1072 TTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSTRAWLCRTC 1131
Query: 920 GSMLAT-----SFIQPQKLPRRE-------------IGGLPPRKAPKKVI-CHACQTSKG 960
GS L+T + P K P E GG+ ++ C C
Sbjct: 1132 GSFLSTQVAVSQLLSPHKNPAMEAVVKSSSVAVAKPTGGVSALGGLSGIVRCRRCARDAV 1191
Query: 961 ME----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V +YL E AAM ++M ++N
Sbjct: 1192 FDDPRAEVWEDGSGRRFVGGDQTTVVAVPGVLKYLDVELAAMGVRMKFHVDN 1243
>B6HRF9_PENCW (tr|B6HRF9) DNA-directed RNA polymerase OS=Penicillium chrysogenum
(strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)
GN=Pc22g07860 PE=3 SV=1
Length = 1249
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/964 (43%), Positives = 580/964 (60%), Gaps = 81/964 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS +R SF +R + YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MSIIRGSFVKRGQTYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL +T+D EI + + K + V DR +++ ++ C
Sbjct: 276 MILKALAETNDREIFEAIVGAASSK------GMSNTFVTDRVELLLRTYHAYQKHSQYDC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
+++G+ F+P+L + + V L+ V HL + ++DKF L+ FM++KL
Sbjct: 330 RSHLGKAFRPVLGVPADMPDEEVGTEFLRKVVLPHLGNENVTESQDWDKFKLITFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDF 229
+S V G DNPD++ NQE+LL G L + LKE++E+WL+S +D R +G F
Sbjct: 390 YSTVAGDCAPDNPDAVSNQEILLGGFLYGMILKERIEEWLRSFGPIARDWSIRNNGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDEAFERDFLSKIVKRSNENIGNALEYFLSTGNLVSPTGLDLQQTSGYTVIAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C I +
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCLIAT--- 565
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
D + + LV G+ L E + V LDG I+G + ++I
Sbjct: 566 ------DNLDVS-HLPRTLVQLGVRSESSVAL----DESVVVQLDGRIIGYCSPKQAQRI 614
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
IR KV IP +LEVGY+P S GG YPG+Y+F+ +R RPV+ +++
Sbjct: 615 ADTIRYWKVEGKNNIPRELEVGYIPNSSGGQYPGVYMFSQSARMYRPVKYLAL-----DK 669
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C + P +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 670 LDYVGPFEQPFMEIACVE------SDLIPGLSTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM +I HR D KLY +QT QTPIVR Y Y +D +P G NA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTSIAHRTDNKLYRIQTGQTPIVRPPLYNAYGLDNFPNGMNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKS+ ERG HG +Y+T+ V L E SR + S R K
Sbjct: 784 IISYTGYDMDDAMIINKSAHERGFGHGTVYKTKVVTLAENDSRRNKSKREVTKLFGFAPG 843
Query: 638 ---SNIEKSKLDSDGLPHVGQMIRPDEPYCSIYN-----ASTS------STHTLKKKGSE 683
+ ++ +D DG+PH+G ++ + + +N AS S TH +K K +E
Sbjct: 844 DEIKDQVRNTIDEDGMPHLGARVKEGDKIAAWHNVRFDPASDSYVNVDGVTHYMKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
YVD + + + Q ++I++R PR PVIGDKFSSRHGQKGV SQLWP VDMPF
Sbjct: 904 EGYVDSIRIMGSESGNEPAQSLSIKYRIPRKPVIGDKFSSRHGQKGVLSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+GM+PDLIINPHAFPSRMTIA ++ES+A K G++HG ++TPF+ S +
Sbjct: 964 -ESGMQPDLIINPHAFPSRMTIAQMIESMAGKAGAMHGLPQDSTPFQFS---------EE 1013
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D G+ LR+ G+NY+G E LYSGV G+E + +I++G VYYQRLRHMV+DKFQVR+T
Sbjct: 1014 NTATDYFGEQLRKAGYNYYGNEPLYSGVTGREFSADIYMGLVYYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+ +T QP GEMERDSL+AHGAA+LL DRL CSD +C CGS
Sbjct: 1074 GPVNALTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFLLQDRLMNCSDAQHTWICRCCGS 1133
Query: 922 MLAT 925
L+T
Sbjct: 1134 FLST 1137
>B2A911_PODAN (tr|B2A911) DNA-directed RNA polymerase OS=Podospora anserina (strain
S / ATCC MYA-4624 / DSM 980 / FGSC 10383) PE=3 SV=1
Length = 1234
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1055 (41%), Positives = 621/1055 (58%), Gaps = 115/1055 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R SF+ R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 LAITRPSFTNRGPSYTPHGIIVRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI +S KG V + DR +++ + +L+T+ Q
Sbjct: 266 MILKALVETNDREI---FESLVGPPTSKG---VENTFLTDRVELLLRTYKTYNLYTKKQT 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+G+ F+ +L + V L+ V VHL + + DKF +L+FM +KL
Sbjct: 320 RAYLGQKFRVVLGVPDTMTDYEVGTEFLRKVVLVHLGCNDVTEEQDTDKFKMLLFMCRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFD 228
++LV G +DNPD++QNQE+LL G L + LKE+LED L + +D ++R
Sbjct: 380 YALVAGDCAVDNPDAVQNQEILLGGFLYGMILKERLEDLLSTALRGALRDHLRRNPTDSF 439
Query: 229 FSEIFVVK---KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
SE F + F KT I ++E L TG L + +GLDLQQ +G+TV A++LN+LR
Sbjct: 440 VSESFRKQFPGHIFRKT-NENIGNALEYFLSTGNLQSPSGLDLQQVSGFTVVAEKLNFLR 498
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
F+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C+IT+
Sbjct: 499 FISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCKITT-- 556
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D + +L++ V++ + E + V+LDG +VG +
Sbjct: 557 ----KAADVSAVPGVLLELGVNNYSSAATT--------ESVVVMLDGKVVGWCAPQNAKP 604
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+ +R+LKV IP +LE+GYVP S GG+YPG+Y+ ++ SR VRPV+ +++ NK
Sbjct: 605 LADTLRQLKVEGGHGIPLELEIGYVPTSNGGSYPGIYMASNTSRMVRPVKYLAL----NK 660
Query: 466 NIDLIGPFEQVFMEIRCPDG----GDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQ 521
D++GP+EQ +M I C + GD +TH E PT +LS++AN TP+SD NQ
Sbjct: 661 E-DMVGPYEQPYMSIACVEQEIVPGD--------STHVEFDPTNILSILANMTPFSDFNQ 711
Query: 522 SPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA 581
SPRNMYQCQM KQTM + HR D K+Y +QT QTP+VR+ + Y D +P G NA
Sbjct: 712 SPRNMYQCQMGKQTMGTPGAALAHRTDNKMYRIQTGQTPVVRSPLHNTYGFDNFPNGFNA 771
Query: 582 IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTE--QGSRSDPSSRMF---- 635
+VAV++YTGYDM+DAMI+NKS+ ERG HG IY+T+ + L + + S +++MF
Sbjct: 772 VVAVISYTGYDMDDAMIINKSAHERGFGHGSIYKTKKISLKDDSRTRSSKTTTKMFGFAP 831
Query: 636 ----RKSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKKKG 681
R S ++ LD DGLP+VG+++R + + + S TH + K
Sbjct: 832 GSPIRAS--DREMLDEDGLPYVGRLVREGDIIAAWHTVSADYSGKLVNRDGITHWERYKE 889
Query: 682 SEPVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDM 738
+E +++ V V D N+ LQ ++I+ R PR+PVIGDKFSSRHGQKGVCSQ WP VDM
Sbjct: 890 AEDAFIEEVRVIGSDTGNEP-LQTLSIKLRVPRSPVIGDKFSSRHGQKGVCSQKWPAVDM 948
Query: 739 PFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGES 798
PF TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ S
Sbjct: 949 PFS-ETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFS-------- 999
Query: 799 EKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQV 858
+ + D G L + G+NYHG E +YSG+ G+E C+I+IG VYYQRLRHMV+DK+QV
Sbjct: 1000 -EENMAADYFGHQLMKAGYNYHGNEPMYSGITGEEFMCDIYIGVVYYQRLRHMVNDKYQV 1058
Query: 859 RSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSL 918
R+TG V T QP GEMERD+LLAHG A+LL DRL CSDY + +C
Sbjct: 1059 RTTGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSKSWICRD 1118
Query: 919 CGSMLATSFIQPQKLP----RREIGGLPPRKAPK-----------KVICHACQTSKGME- 962
CGS LA +QP P R+++G + R + K+ + +G++
Sbjct: 1119 CGSFLA---VQPTVSPFIGKRKQVGTVRCRNCAQRLDQIEDLDLMKLDGEIWEDGQGVQW 1175
Query: 963 -------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
V +P +YL E AAM +K+ +++
Sbjct: 1176 IGGENTTMVVVPGALKYLDVELAAMGVKLKYNVDS 1210
>L7M0S2_9ACAR (tr|L7M0S2) DNA-directed RNA polymerase OS=Rhipicephalus pulchellus
PE=2 SV=1
Length = 1059
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1003 (43%), Positives = 598/1003 (59%), Gaps = 75/1003 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR S+ R + +++ V +R V+ DQ+ + L+YL N + ++ F + +PV
Sbjct: 116 IAMVRPSWKNRGKMFSEYGVSLRSVKPDQTGTNMVLHYLTNGTVQVMFSYMKELFFMPVM 175
Query: 61 IVLKALIDTSDLEIRTNLKSCYNE-KYEKGKGAVGTQRVDDRARMIIEEVRQL---SLFT 116
++LKAL D SD I + L + E + KG II +RQ+ L T
Sbjct: 176 MLLKALCDVSDHHIYSELIAGKEEDSFFKG--------------CIINMLRQVQNEGLLT 221
Query: 117 RLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSL 176
R Q YIGE F+ + + S + VA +L+ + VH + N DKFNL++ M++KLF++
Sbjct: 222 RDQVRAYIGEKFRICMRLPEWYSDEEVAVFLLRHCICVHTESNIDKFNLILLMIRKLFAV 281
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVK 236
G +++ D+ N E+LL GHL + LKEKL +L S + +++K+ + S +
Sbjct: 282 AKGECAIESTDNPMNHEILLAGHLYLMVLKEKLSGFLYSIRQNIEKKAKSTG-SAFKLSM 340
Query: 237 KCFDKTPARA--ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
F + A + +++++ L TG +VT TGL L Q G TV A++LNY R+LSHFR VH
Sbjct: 341 ANFSRALATSWDLTSAMNYFLATGNVVTKTGLGLMQFTGTTVIAEKLNYWRYLSHFRCVH 400
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RGA FA +RTTTVRKLLPE+WGFLCPVHTPDG PCGLLNHMT + ++ G +
Sbjct: 401 RGAFFAEMRTTTVRKLLPEAWGFLCPVHTPDGAPCGLLNHMTALVEVVNHQFPTGHLPS- 459
Query: 355 FKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK 414
+L GM L + P E V+LDG ++G + VE +V +R +K
Sbjct: 460 ---------LLAGLGMAPL--DGIRPNVAESYVVVLDGRVLGYVEDSSVENMVTSLRTMK 508
Query: 415 VSSSAMIPDDLEVGYVP-LSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
+P LE+G+VP S YPG++LFTS +R +RPV N+ I+ IG F
Sbjct: 509 ACGLEKVPQTLEIGFVPKTSQASQYPGVFLFTSVARMMRPVLNM-----RTDTIEWIGTF 563
Query: 474 EQVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
EQV + I R ++ TH+E+ T MLS++AN P+SD NQSPRNMYQCQM
Sbjct: 564 EQVHLSICVV------RDEAYEGITTHQELRQTSMLSLLANMIPYSDFNQSPRNMYQCQM 617
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
KQTM Q +++R+D KLY +QTPQTP+VR + Y Y++DEYPTGTNAIVAV++YTGY
Sbjct: 618 GKQTMGTPCQALRYRSDNKLYRIQTPQTPLVRPTAYDHYDMDEYPTGTNAIVAVISYTGY 677
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDL-TEQGSRSDPSSRMFRKSNIEK---SKLDS 647
DMEDAM+LNKSSVERG HG IY++E V+L G S +F + ++ +D
Sbjct: 678 DMEDAMVLNKSSVERGFKHGSIYKSEVVNLRVLAGDVGRQVSLVFGRKMTDRHLEGHIDL 737
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNI 705
DGLP++G + ++P CS N T T K K E YV V + + LQ V I
Sbjct: 738 DGLPYIGTKVEHNQPVCSFINIVTGETKVHKYKNMEAGYVHEVKLLGNDTGTDVLQAVCI 797
Query: 706 RFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAM 765
+ RNP+IGDKF+SRHGQKGVCS L P +MPF +GM PD+I NPH FPSRMTI M
Sbjct: 798 TYWIQRNPMIGDKFASRHGQKGVCSLLLPVENMPFT-ESGMTPDIIFNPHGFPSRMTIGM 856
Query: 766 LLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVL 825
++ES+A K LHG +ATPF+ S +D SE G++L++ G+NY+G E +
Sbjct: 857 MIESMAGKSSMLHGVAHDATPFKFS--EDQPASEY-------FGELLQKAGYNYYGTERM 907
Query: 826 YSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGE 885
YSGV G+EL +IF G VYYQRLRHMV+DK+QVR+TG VD +T QP FGE
Sbjct: 908 YSGVDGRELEADIFFGVVYYQRLRHMVADKYQVRTTGPVDTLTHQPVKGRKRAGGIRFGE 967
Query: 886 MERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK 945
MERDSLLAHGA++LL DRL CSD +A VCS C SML+ + +
Sbjct: 968 MERDSLLAHGASFLLQDRLFNCSDKSLAYVCSKCQSMLSPVVDKAES------------D 1015
Query: 946 APKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+K C CQTS +E +++PYVFRYL AE AAMNI + L++
Sbjct: 1016 VVRKWKCPTCQTSDFIEIISIPYVFRYLVAELAAMNIGVKLQV 1058
>Q4TBC6_TETNG (tr|Q4TBC6) DNA-directed RNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00003816001 PE=3 SV=1
Length = 1071
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1026 (42%), Positives = 596/1026 (58%), Gaps = 117/1026 (11%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + +RCV+ D +++ + L+YL N + L F + + LP+G LK
Sbjct: 120 RPKWKSRGQGYTQYGISMRCVKEDHTAVNMTLHYLDNGTVMLNFIYQKELFFLPLGFALK 179
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D +D +I L KG R+ + F + Q L+++
Sbjct: 180 ALVDFTDFQIYQELI----------KG------------------REDNSFYKNQVLSFL 211
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
GE F+ + + ++ A +L+D + +HL + +KFNLL M +KLF+ + +
Sbjct: 212 GERFRVKMNLPEWYTHQQCATILLEDCICIHLKSDAEKFNLLCLMTRKLFTFAKQECMEE 271
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCFDKTP 243
NPDS+ QEVL PG L ++LKE++ WL S K ++K+ + S V K F+
Sbjct: 272 NPDSITFQEVLTPGQLYLMFLKERMAAWLVSVKLACEKKATRLNLSWSADSVMKIFNM-- 329
Query: 244 ARAISTSIENMLKTGRLVTNTG--------------------LDLQQRAGYTVQADRLNY 283
A IS S E +L TG L + +G L + Q G V AD+LN+
Sbjct: 330 ATDISKSFEYLLATGNLSSKSGMAAAARAAPGRRADRCCLAGLGMLQSTGLCVVADKLNF 389
Query: 284 LRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITS 343
+R+LSHFR VHRGA+FA +RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I +
Sbjct: 390 IRYLSHFRCVHRGAAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTANCEIVA 449
Query: 344 YFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSG 401
S +S+ +L G+T P PG + V+LDG +VG + S
Sbjct: 450 QTAS----------TVSLPALLCSLGVT---PVDGSPGQAYSDCYPVVLDGAVVGWVESD 496
Query: 402 EVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISIL 460
+V +R KV IP E+ VP + + YP L LFT+P R +RPV+N+++
Sbjct: 497 LAPAVVDALRRFKVLREKKIPPWTEIVLVPKTGKPSLYPALLLFTTPCRMMRPVQNLTLG 556
Query: 461 SNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHN 520
E LIG FEQ++M + G + TH+E+ P MLSVVAN P+SDHN
Sbjct: 557 KQE-----LIGTFEQLYMNV----GVFAAEVQAGVTTHQELFPHSMLSVVANFIPYSDHN 607
Query: 521 QSPRNMYQCQMA----------KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKY 570
QSPRNMYQCQM KQTM F T R+D KLY LQTPQ+P+VR S Y Y
Sbjct: 608 QSPRNMYQCQMGECRDGSVDGGKQTMGFPLHTFADRSDNKLYRLQTPQSPLVRPSMYDHY 667
Query: 571 NIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDP 630
++D YP+GTNA+VAV++YTGYDMEDAMI+NK+S ERG HG IY+TE VDL E+ D
Sbjct: 668 SLDNYPSGTNAVVAVISYTGYDMEDAMIVNKASWERGFAHGSIYKTEVVDLAERVKGDD- 726
Query: 631 SSRMFRKSNIE---KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYV 687
S +F + + + KLD+DGLPH+G ++R +P+ S + +T + + E V
Sbjct: 727 -SVVFGTTPGDPRVEDKLDADGLPHIGSVLRYGDPFYSYVDLNTGQSSVSYYRSQEACVV 785
Query: 688 DYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTG 745
D + V + + V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF +G
Sbjct: 786 DNIKVCSNDSGAGRFKHVCITTRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESG 844
Query: 746 MRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLL 805
M PD++ NPH FPSRMTI ML+ES+A K G+LHG +ATPF + +D L
Sbjct: 845 MCPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPF--TFSEDTSA-------L 895
Query: 806 DDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD 865
+ G+MLR G+NY+G E LYSG+ G+EL +IFIG VYYQRLRHMVSDKFQVR+TG D
Sbjct: 896 EYFGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARD 955
Query: 866 QVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLAT 925
+VT QP FGEMERD+LLAHG+++LLHDRL CSD +A VC CGS+L+
Sbjct: 956 KVTNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSP 1015
Query: 926 SFIQPQKLPRREIGGLPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNI 982
+P PP + +K +C C S + ++++PYVFRY AE AAMNI
Sbjct: 1016 LLEKP-----------PPYWSATRHRKTVCMLCGRSDSIASLSVPYVFRYFVAELAAMNI 1064
Query: 983 KMTLKL 988
K+ L++
Sbjct: 1065 KVKLEV 1070
>N1PM86_MYCPJ (tr|N1PM86) Uncharacterized protein OS=Dothistroma septosporum NZE10
GN=DOTSEDRAFT_155234 PE=4 SV=1
Length = 1207
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/1040 (42%), Positives = 608/1040 (58%), Gaps = 90/1040 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF R YT AV IR VR DQ+S + L+YL + + F + EYL+PV
Sbjct: 204 LALIRPSFENRGATYTKFAVQIRSVRKDQTSQSNTLHYLNDGNVIFRFSWRKNEYLVPVM 263
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+VLKAL++T+D EI + GKG Q V DR ++ + L + +
Sbjct: 264 LVLKALVETNDREIFEGIVGPAG-----GKGLESRQFVTDRVEHLLRTFKAFPLHGKAKA 318
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
YIG F+P+L + S ++ V HL DN DKF +L+FM +K
Sbjct: 319 RAYIGAKFRPVLNVPEALSDQEAGTEFVRKIVLPHLGSYDVTEAQDN-DKFRMLVFMTRK 377
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEI 232
L+SL +G LDNPD++QNQE+LLPG L + +KE++E+WL S D + R G + +
Sbjct: 378 LYSLAEGECTLDNPDAVQNQEILLPGFLFGMIIKEQVEEWLNSIGDTL-RIYGRVNQYPL 436
Query: 233 FVVKKCFDKTPARAISTSIENM-------LKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F K+ A+ + + EN+ + TG L++ +GLDLQQ +G+TV A+++N+ R
Sbjct: 437 FTSKEFEKDFMAKVVRRTNENLGQKLDYFMSTGNLLSPSGLDLQQVSGFTVVAEKINFYR 496
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
F+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C + S
Sbjct: 497 FISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKC-LVSTD 555
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
++ S + ++ G++ + L + + V LDG I+G + +
Sbjct: 556 NTDAS---------HVPALIAQLGVSSMADAKL----EDSVVVQLDGRILGFCSPKQAKV 602
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV + +P DLE+G +PLS GG YPGL++F+ +R +RPV+ + +
Sbjct: 603 ISDTLRYWKVEGTHHVPVDLELGLIPLSNGGQYPGLFMFSEAARMLRPVKYLPLGKQ--- 659
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
D++GPFEQ FM I C D +S +TH E T +LS+VAN+TP+S+ NQSPRN
Sbjct: 660 --DIVGPFEQPFMSIACTDP----EIASNDSTHVEYDVTNILSIVANQTPFSNFNQSPRN 713
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQTM +++R D K Y LQT QTP+VR + +Y +D +P GTNA+VAV
Sbjct: 714 MYQCQMGKQTMGTPGTALKYRTDNKSYRLQTGQTPVVRAPKHNEYGLDNFPNGTNAVVAV 773
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-----FRKSNI 640
++YTGYDM+DAMILNKS+ ERG HG IY+ + +DL E+ + S + F ++I
Sbjct: 774 ISYTGYDMDDAMILNKSAHERGFGHGTIYKAKKIDLAEENKQGRGRSGITHVFGFAPNSI 833
Query: 641 EKSK----LDSDGLPHVGQMIRP-----------DEPYCSIYNASTSSTHTLKKKGSEPV 685
K+ LD DGL +G ++ +P Y TH K K SE
Sbjct: 834 IKASWRETLDDDGLGRIGWKVKEGDAIAASYSVVKDPLTGDYVNQDGITHIHKYKESEEA 893
Query: 686 YVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+++ + + + N Q V+IRFR PR+PVIGDKFSSRHGQKGVCSQ WP +DMPF
Sbjct: 894 FIEEIKLIGNESGNNDPCQAVSIRFRIPRSPVIGDKFSSRHGQKGVCSQKWPMIDMPFT- 952
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF K ++ E E +
Sbjct: 953 ESGMQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDSTPF----KFEDKEGETA- 1007
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
++ G L+ G+NY+G E +YSG+ G+EL +I+IG VYYQRLRHMV+DK+QVR+TG
Sbjct: 1008 --IEYFGHQLKRAGYNYYGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKYQVRTTG 1065
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V +T QP GEMERDSL+AHG A+LL DRL CSDY A VC CGS
Sbjct: 1066 PVTPLTGQPIKGRAKGGGIRVGEMERDSLIAHGTAFLLQDRLMNCSDYTKAHVCKTCGSF 1125
Query: 923 LAT-----SFIQPQKLPRREIGGLPPRKA----PKKVICHACQTSK-----GMETVAMPY 968
L+T + ++ R RKA PK + +K + VA+P
Sbjct: 1126 LSTQPSSGQYGGRRREGGRTRCRRCSRKALSTDPKSECWEDRKGTKWFGGDNVTVVAIPG 1185
Query: 969 VFRYLAAEFAAMNIKMTLKL 988
V RYL E AAM I+M K+
Sbjct: 1186 VLRYLDVELAAMGIRMNFKV 1205
>Q6FPQ9_CANGA (tr|Q6FPQ9) DNA-directed RNA polymerase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0J01848g PE=3 SV=1
Length = 1202
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1041 (42%), Positives = 608/1041 (58%), Gaps = 104/1041 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 212 MAIIRPSFANRGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPVV 271
Query: 61 IVLKALIDTSDLEIRTNL-KSCYNEKYEKGKGAVGTQRVDDRARMIIE--EVRQLSLFTR 117
+++KAL+DTSD EI + S N + + DR +++ + R L R
Sbjct: 272 MIMKALVDTSDREIFDGIIGSNTNNSF-----------LTDRLELLLRGFKKRYPQLKNR 320
Query: 118 LQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQKLFS 175
Q L Y+G+ F+ + + S V + VL V VHL + N DKF +L+FM++KL+S
Sbjct: 321 TQVLQYLGDKFRLVFQASPDKSDYEVGQEVLNRIVLVHLGSNGNMDKFRMLLFMVRKLYS 380
Query: 176 LVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEI 232
LV G DNPD+ Q+QEVLL G L + LKEK++++LQ +++ + +F+E
Sbjct: 381 LVAGECCPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQGIVAQVRTDINRGVAINFNE- 439
Query: 233 FVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
KK + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 440 ---KKYMSRVLMRVNDNIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 496
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ +Q
Sbjct: 497 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---TQS 553
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ + ++L G+T P + V LDG I+G + I
Sbjct: 554 DVS-------KVPELLYSLGVTP--ASHTFAAGPSLCCVQLDGKIIGWTSHEQGRVIADT 604
Query: 410 IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV + +P DLE+GYVP S G YPGLY+F SR +RPVR + L E D
Sbjct: 605 LRFWKVEGETPGLPKDLEIGYVPPSSKGQYPGLYIFGGHSRMMRPVRYLP-LDKE----D 659
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMYQ
Sbjct: 660 IVGPFEQVYMNIAVTPQ----EIQNNIHTHVEFSPTNILSILANLTPFSDFNQSPRNMYQ 715
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P GTNA+VAV++Y
Sbjct: 716 CQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGTNAVVAVISY 775
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----S 643
TGYDM+DAMI+NKS+ ERG +G +Y+ E VDL+ SR DP ++ F E
Sbjct: 776 TGYDMDDAMIINKSADERGFGYGTMYKVEKVDLSLNRSRGDPVTQHFGFGTDEWPKEWLD 835
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDL 700
KLD DGLP++G + +P C+ ++ + T SEP Y++ V + D NK ++L
Sbjct: 836 KLDEDGLPYIGTYVEEGDPICAYFDDTIGKTKIKTYHSSEPAYIEEVNLIGDESNKFQEL 895
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
Q V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSR
Sbjct: 896 QTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDVIINPHAFPSR 954
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI M +ES+A K G+LHG ++TP+ + + D G+ L + G+NYH
Sbjct: 955 MTIGMFVESLAGKAGALHGIAQDSTPWIFNEQDTPA---------DYFGEQLLKAGYNYH 1005
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E +YSG G+EL C+I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1006 GNEPMYSGATGEELRCDIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGG 1065
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
GEMERD+L+ HG ++LL DRL SDY A +C CGS+L T Q +PR IG
Sbjct: 1066 IRVGEMERDALIGHGTSFLLQDRLLNSSDYTQAAICRECGSILTTQ----QTVPR--IGA 1119
Query: 941 LPP----------RKAPKKVICHACQTSKGM----------------------ETVAMPY 968
+ A K + H +T + + TVA+P+
Sbjct: 1120 VSSVCCRRCAVKFEDAKKTLFEHEEKTEEKIFIDDSQIWEDGQGQKFVGGNDTTTVAIPF 1179
Query: 969 VFRYLAAEFAAMNIKMTLKLN 989
V +YL +E +AM I++ ++
Sbjct: 1180 VLKYLDSELSAMGIRLRYNVD 1200
>H2SUS2_TAKRU (tr|H2SUS2) DNA-directed RNA polymerase (Fragment) OS=Takifugu
rubripes GN=LOC101069107 PE=3 SV=1
Length = 1072
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1028 (43%), Positives = 592/1028 (57%), Gaps = 120/1028 (11%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R + R +GYT + +RCV+ D +++ + L+YL N + L F + + LP+G LK
Sbjct: 120 RPKWKSRGQGYTQYGMAMRCVKDDHTAINMTLHYLDNGTVMLNFIYQKELFFLPLGFALK 179
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL+D SD I L KG R+ + F + + LN++
Sbjct: 180 ALVDFSDFHIYQELV----------KG------------------REDNSFYKSKVLNFL 211
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
GE F+ + + + + A +L + V +HL N +KF +L M +KLF+ + +
Sbjct: 212 GERFRVKMNLPEWYTNEQCAHILLDECVCIHLKTNVEKFYMLCLMTRKLFTFAKQECMEE 271
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCFDKTP 243
NPDS+ QEVL PG L ++LKE++ WL S K ++K+ + S V K F+
Sbjct: 272 NPDSITFQEVLTPGQLYLMFLKERMAAWLVSVKLAFEKKAARLNLSWNAENVMKIFNM-- 329
Query: 244 ARAISTSIENMLKTGRLVTNTG------------------LDLQQRAGYTVQADRLNYLR 285
IS S E +L TG L + +G L + Q G V AD+LN++R
Sbjct: 330 GADISKSFEYLLATGNLSSKSGMAPGARLASRMRRTISGCLGMLQATGLCVVADKLNFIR 389
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
+LSHFR VHRGA+FA +RTT+VRKLLPESWGFLCPVHTPDGEPCGL+NHMT C I +
Sbjct: 390 YLSHFRCVHRGAAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTANCEIVAQA 449
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEV 403
S S+ +L G+T P PG + VLLDG +VG + S
Sbjct: 450 VSTTSLPA----------LLCSLGVT---PVDGAPGQAYSDCYPVLLDGAVVGWVESELA 496
Query: 404 EKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSN 462
+V +R KV IP E+ VP + + YP L LFT+P R +RPV+N+S+
Sbjct: 497 PAVVDSLRRFKVLKEKKIPAWTEIVLVPKTGKPSLYPALLLFTTPCRLMRPVQNLSVGRQ 556
Query: 463 ENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
E LIG FEQ++M + G + TH+E+ P MLSVVAN P+SDHNQS
Sbjct: 557 E-----LIGTFEQLYMNV----GIFEDEVTPGVTTHQELFPHSMLSVVANFIPYSDHNQS 607
Query: 523 PRNMYQCQMA-------------KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTK 569
PRNMYQCQM KQTM F T R+D KLY LQTPQ+P+VR S Y
Sbjct: 608 PRNMYQCQMGECRCAELEHLFSGKQTMGFPLHTFLDRSDNKLYRLQTPQSPLVRPSMYDH 667
Query: 570 YNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSD 629
Y++D YP+GTNAIVAV++YTGYDMEDAMI+NK+S ERG HG IY+TE VDL E+ D
Sbjct: 668 YDLDNYPSGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSIYKTEVVDLAERVKGDD 727
Query: 630 PSSRMFRKS----NIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPV 685
S +F +E KLD+DGLPH+G ++R +P S N +T + + E
Sbjct: 728 --SVVFGTGPGGPGVE-DKLDADGLPHIGSVLRHGDPLYSYINLNTGQSVICYYRSQEAC 784
Query: 686 YVDYVAVDVKNKKD--LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGT 743
VD + + + ++V I R PRNP IGDKF+SRHGQKG+ S+LWP DMPF
Sbjct: 785 VVDNIKICSNDNGSGRFKRVCITTRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFT-E 843
Query: 744 TGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGL 803
+GM PD++ NPH FPSRMTI ML+ES+A K G+LHG +ATPF + +DN
Sbjct: 844 SGMCPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPF--TFSEDNSA------ 895
Query: 804 LLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT 863
L+ G+MLR G+NY+G E LYSG+ G+EL +IFIG VYYQRLRHMVSDKFQVR+TG
Sbjct: 896 -LEHFGEMLRAGGYNYYGTERLYSGLSGEELEADIFIGVVYYQRLRHMVSDKFQVRTTGA 954
Query: 864 VDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 923
D+VT QP FGEMERD+LLAHG+++LLHDRL CSD +A VC CGS+L
Sbjct: 955 RDKVTNQPVGGRNVEGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLL 1014
Query: 924 ATSFIQPQKLPRREIGGLPPRKAP---KKVICHACQTSKGMETVAMPYVFRYLAAEFAAM 980
+ +P PP + +K +C C S+ + +V++PYVFRY AE AAM
Sbjct: 1015 SPLLEKP-----------PPYWSATRHRKTVCVLCGKSESVASVSVPYVFRYFVAELAAM 1063
Query: 981 NIKMTLKL 988
NIK+ L++
Sbjct: 1064 NIKVKLEV 1071
>F2S4E0_TRIT1 (tr|F2S4E0) DNA-directed RNA polymerase OS=Trichophyton tonsurans
(strain CBS 112818) GN=TESG_05818 PE=3 SV=1
Length = 1244
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1073 (41%), Positives = 612/1073 (57%), Gaps = 129/1073 (12%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +RNSF +R YT V +R VR DQ+S T L+YL + + F + EYL+PV +
Sbjct: 217 AIIRNSFQKRGSAYTKFGVQLRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMM 276
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQ 119
+LKALI+T+D EI E+ +G++G + V DR +++ + + +R +
Sbjct: 277 ILKALIETNDREI--------FERLVGREGSLGIENTFVTDRVELLLRTYKAYGVHSRSK 328
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQ 171
C Y+G F+ +L ++ + V L+ V HL DN DKFN+++FM++
Sbjct: 329 CRAYLGSKFRFVLGMPEDIPEEDVGTEFLRKIVLPHLGNQNVTETQDN-DKFNMILFMIR 387
Query: 172 KLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFD 228
KL++LV G DNPD++ NQEVLL G+L + LKE+LE+WL+S + + ++
Sbjct: 388 KLYNLVAGDCAPDNPDAVSNQEVLLGGYLYGMLLKERLEEWLKSVGPMVRDWRMRNQDAK 447
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F++ ++ + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ R
Sbjct: 448 FTDPKFEREFLTRIIGRTNENIGGAMEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYR 507
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 508 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTSN 567
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G I +L G+T + P V LDG I+G +
Sbjct: 568 LDVSG-----------IPGVLAGLGVTSESSCSIEESIP----VQLDGKILGYCTPKQSR 612
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 613 AIADTLRYWKVQGHKQIPVELEIGYVPCSNGGQYPGVYMFSEAARMYRPVKYLPL----- 667
Query: 465 KNIDLIGPFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+D +GPFEQ +MEI C D +G +TH E PT +LS++AN TP+SD NQS
Sbjct: 668 DKLDYVGPFEQPYMEIACVASDIRNG------VSTHIEFDPTHILSILANMTPFSDFNQS 721
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQM KQ M I +R D KLY LQT QTP+VR Y Y +D +P G NA+
Sbjct: 722 PRNMYQCQMGKQAMGTPGTAIDYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGMNAV 781
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------F 635
VAV++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S+ F
Sbjct: 782 VAVISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIYALDDKESRGRGKSKRAITKLFGF 841
Query: 636 RKSNI----EKSKLDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKK 680
+ K++LD DGLPH+G + +P Y TH LK K
Sbjct: 842 APGGLVKAEWKAQLDEDGLPHIGAKVSEGSLVGAWHTVQYDPATDTYINVDKQTHFLKYK 901
Query: 681 GSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDM 738
E ++D V V + Q V+I++R PR PVIGDKFSSRHGQKGV SQLWP DM
Sbjct: 902 DGEEGFIDSVRVLGSETGNEVCQAVSIKYRVPRRPVIGDKFSSRHGQKGVLSQLWPATDM 961
Query: 739 PFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGES 798
PF +G++PD+IINPHAFPSRMTI M +ES+A K GSLHG ++TPF+ S + G
Sbjct: 962 PFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGSLHGLPQDSTPFQFSEEATAG-- 1018
Query: 799 EKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQV 858
D G+ L++ G+N+HG E +YSG+ G+E +I+IG VYYQRLRHMV+DKFQV
Sbjct: 1019 -------DFFGKQLQKAGYNFHGNEPMYSGITGREFAADIYIGVVYYQRLRHMVNDKFQV 1071
Query: 859 RSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSL 918
R+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C
Sbjct: 1072 RTTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSQRAWICRT 1131
Query: 919 CGSMLAT-----SFIQPQKLPRRE-------------------IGGLP--------PRKA 946
CGS ++T + P K P + +GGL R+A
Sbjct: 1132 CGSFISTQVAVSQLLSPHKNPAMDAVVQSTASAIAKPLSGVSALGGLAGIVRCRRCAREA 1191
Query: 947 ----PKKVICHACQTSK---GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
P+ + + G +T VA+P V +YL E AAM IKM +++N
Sbjct: 1192 VFDDPRAEVWEDGSGKRYVGGSDTTVVAVPGVLKYLDVELAAMGIKMRFQVDN 1244
>C5G0Y5_ARTOC (tr|C5G0Y5) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_08607 PE=3 SV=1
Length = 1243
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1073 (42%), Positives = 613/1073 (57%), Gaps = 129/1073 (12%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +RNSF +R YT + IR VR DQ+S T L+YL + + L F + EYL+PV +
Sbjct: 216 AIIRNSFQKRGSAYTKFGIQIRSVRPDQTSQTNVLHYLSDGNVTLRFSWRKNEYLVPVMM 275
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQ 119
VLKALI+T+D EI E+ + ++G + V DR +++ + + +R +
Sbjct: 276 VLKALIETNDREI--------FERLVGREDSLGIENTFVTDRVELLLRTYKAYGVHSRSK 327
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQK 172
C Y+G F+ +L ++ + V L+ V HL + + DKFN+++FM++K
Sbjct: 328 CRAYLGSKFRFVLGMPEDVPDEDVGTEFLRKIVLPHLGNQNVTESQDNDKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFD 228
L++LV G DNPD++ NQEVLL G+L + LKE+LE+WL+S +D R T
Sbjct: 388 LYTLVAGDCAPDNPDAISNQEVLLGGYLYGMLLKERLEEWLKSVGPIVRDWRMRNQDT-K 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F++ ++ K R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ R
Sbjct: 447 FTDPKFEREFLAKVIGRTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G + +L G+T P V L+G I+G +
Sbjct: 567 LDVSG-----------VPGVLAGLGVTSESSCSTEESIP----VQLNGKILGYCTPKQSR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPVR + +
Sbjct: 612 AIADTLRYWKVQGHKHIPVELEIGYVPSSSGGQYPGVYMFSEAARMYRPVRYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+D +GPFEQ +MEI C D +G +TH E PT +LS++AN TP+SD NQS
Sbjct: 667 DKLDYVGPFEQPYMEIACIASDIRNG------ISTHIEFDPTHILSILANMTPFSDFNQS 720
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQM KQ M I +R D KLY LQT QTP+VR Y Y +D +P G NA+
Sbjct: 721 PRNMYQCQMGKQAMGTPGTAIDYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGMNAV 780
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------F 635
VAV++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR +S+ F
Sbjct: 781 VAVISYTGYDMDDAMIINKSSHERGFGYGTIYKTKVYALDDKESRGRGASKRSITKLFGF 840
Query: 636 RKSNI----EKSKLDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKK 680
+ K++LD DGLPH+G + +P Y TH LK K
Sbjct: 841 APGGLIKAEWKAQLDEDGLPHIGAKVSEGSLVGAWHTVQYDPATDTYVNVDKQTHFLKYK 900
Query: 681 GSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDM 738
E YVD V + + Q V+I++R PR PVIGDKFSSRHGQKGV SQLWP DM
Sbjct: 901 DGEEGYVDSVRILGAETGNEVCQAVSIKYRVPRRPVIGDKFSSRHGQKGVLSQLWPSTDM 960
Query: 739 PFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGES 798
PF +G++PD+IINPHAFPSRMTI M +ES+A K GSLHG ++TPF+ S E
Sbjct: 961 PFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGSLHGLAQDSTPFQFS------EE 1013
Query: 799 EKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQV 858
+ +G D G+ L++ G+N+HG E +YSG+ G+E +I+IG VYYQRLRHMV+DKFQV
Sbjct: 1014 DTAG---DYFGKQLQKAGYNFHGNEPMYSGITGREFAADIYIGVVYYQRLRHMVNDKFQV 1070
Query: 859 RSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSL 918
R+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C
Sbjct: 1071 RTTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSQRAWICRT 1130
Query: 919 CGSMLAT-----SFIQPQKLPRRE-------------------IGGLP--------PRKA 946
CGS ++T + P K P E +GGL R+A
Sbjct: 1131 CGSFISTQVAVSQLLSPHKNPAMEAVVQSTADAIAKPLSGVSALGGLAGIVRCRRCAREA 1190
Query: 947 ----PKKVICHACQTSK---GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
P+ + + G +T VA+P V +YL E AAM +KM ++N
Sbjct: 1191 VFDDPRAEVWEDGSGKRYVGGSDTTVVAVPGVLKYLDVELAAMGVKMRFHVDN 1243
>M9N088_ASHGS (tr|M9N088) FABR029Wp OS=Ashbya gossypii FDAG1 GN=FAGOS_FABR029W PE=4
SV=1
Length = 1196
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1032 (43%), Positives = 608/1032 (58%), Gaps = 99/1032 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ V IRCVR DQ+S T L+YL + F + EYL+PV
Sbjct: 209 MAIIRPSFANRGTSYSHYGVQIRCVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 268
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGA-VGTQRVDDRARMIIEEVRQL--SLFTR 117
++LKAL D SD EI ++ GA + DR +++ ++ L R
Sbjct: 269 LILKALTDASDREI-----------FDGIVGADTSNSFLTDRLELLLRGFKKRFPQLLNR 317
Query: 118 LQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-DDNFDKFNLLIFMLQKLFSL 176
Q L Y+G+ F+ +L + S V + +L+ V VHL D+N DK N+L+FM++KL+SL
Sbjct: 318 RQVLQYLGDKFRVVLQASPDMSDYLVGQELLRRIVLVHLGDENTDKSNMLMFMIRKLYSL 377
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIF 233
V G DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K +++ + DF +
Sbjct: 378 VAGECCPDNPDATQHQEVLLGGFLYGMIVKEKIEEYLQNIKLQIQADVNRGMPVDFKDRK 437
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 438 YMTRVLTRI-NENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMV 496
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C+I++ + D
Sbjct: 497 HRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCKIST------TQSD 550
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IRE 412
KI + + V + P + V LDG IVG S E +IVA +R
Sbjct: 551 VSKIPTLLYSLGVSPAAH------VTAAGPSLCCVQLDGKIVGWC-SHEQGRIVADTLRY 603
Query: 413 LKVSSSA-MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIG 471
KV +P DLE+GYVP S G YPGLYLF SR +RPVR + + D++G
Sbjct: 604 WKVEGKTDGLPLDLEIGYVPASKRGQYPGLYLFGGHSRMMRPVRYLPL-----DKQDIVG 658
Query: 472 PFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQ 530
PFEQV+M+I P+ + TH E PT +LS++AN TP+SD NQSPRNMYQCQ
Sbjct: 659 PFEQVYMDIAVTPE-----EIQNNVHTHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQ 713
Query: 531 MAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTG 590
M KQTM + HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV++YTG
Sbjct: 714 MGKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTG 773
Query: 591 YDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----SKL 645
YDM+DAMI+NKS+ ERG +G +Y+TE +DL+ R DP ++ F E KL
Sbjct: 774 YDMDDAMIINKSADERGFSYGTVYKTEKIDLSLSRGRGDPVTQHFGFGTDEWPKEWLEKL 833
Query: 646 DSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDLQK 702
D DGLP +G + +P C+ ++ + + T SEP Y++ V + D NK ++LQ
Sbjct: 834 DEDGLPIIGSYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVTLIGDESNKFQELQY 893
Query: 703 VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
+ I++R R P IGDKFSSRHGQKGVCS+ WP VDMPF TG++PD+IINPHAFPSRMT
Sbjct: 894 ITIKYRIRRVPQIGDKFSSRHGQKGVCSRKWPTVDMPFS-ETGIQPDVIINPHAFPSRMT 952
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGL 822
I M +ES+A K G+LHG +ATP+ S + D G L + G+NYHG
Sbjct: 953 IGMFVESLAGKAGALHGIAQDATPWTFSEEDTPA---------DYFGDQLLKAGYNYHGN 1003
Query: 823 EVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXX 882
E +YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1004 EPMYSGATGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGGIR 1063
Query: 883 FGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLP 942
GEMERD+L+ HG ++LL DRL SDY + VC CGS+L T P+ IG +
Sbjct: 1064 VGEMERDALIGHGTSFLLQDRLLNASDYTQSAVCRECGSILTTQSSVPK------IGSMV 1117
Query: 943 PRKA---------PKKVIC-------------HACQTSKGME--------TVAMPYVFRY 972
+ KK+I H + +G + TVA+P+V +Y
Sbjct: 1118 TIRCRRCAISFDEAKKIITQQDSEDSIFIDDSHIWEDGQGNKFVGGGNTTTVAIPFVLKY 1177
Query: 973 LAAEFAAMNIKM 984
L +E AAM I++
Sbjct: 1178 LDSELAAMGIRL 1189
>D4DAF6_TRIVH (tr|D4DAF6) DNA-directed RNA polymerase OS=Trichophyton verrucosum
(strain HKI 0517) GN=TRV_04103 PE=3 SV=1
Length = 1243
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1072 (41%), Positives = 612/1072 (57%), Gaps = 127/1072 (11%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +RNSF +R YT V +R VR DQ+S T L+YL + + F + EYL+PV +
Sbjct: 216 AIIRNSFQKRGSAYTKFGVQLRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVVM 275
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQ 119
+LKALI+T+D EI E+ +G++G + V DR +++ + + +R +
Sbjct: 276 ILKALIETNDREI--------FERLVGREGSLGIENTFVTDRVELLLRTYKAYGVHSRSK 327
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQK 172
C Y+G F+ +L ++ + V +L+ V HL + + DKFN+++FM++K
Sbjct: 328 CRAYLGSKFRFVLGMPEDIPEEDVGTELLRKIVLPHLGNQNVTETQDNDKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDF 229
L++LV G DNPD++ NQEVLL G+L + LKE+LE+WL+S + + ++ F
Sbjct: 388 LYNLVAGDCAPDNPDAVSNQEVLLGGYLYGMLLKERLEEWLKSVGPMVRDWRMRNQDAKF 447
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ ++ + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 448 TDPKFEREFLTRIIGRTNENIGGAMEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRF 507
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYF 345
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 508 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTSNL 567
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
D G I +L G+T + P V LDG I+G +
Sbjct: 568 DVSG-----------IPGVLAGLGVTSESSCSIEESIP----VQLDGKILGYCTPKQSRA 612
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 613 IADTLRYWKVQGHKQIPVELEIGYVPSSNGGQYPGVYMFSEAARMYRPVKYLPL-----D 667
Query: 466 NIDLIGPFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+D +GPFEQ +MEI C D +G +TH E PT +LS++AN TP+SD NQSP
Sbjct: 668 KLDYVGPFEQPYMEIACVASDIRNG------VSTHIEFDPTHILSILANMTPFSDFNQSP 721
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQ M I +R D KLY LQT QTP+VR Y Y +D +P G NA+V
Sbjct: 722 RNMYQCQMGKQAMGTPGTAIDYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGMNAVV 781
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FR 636
AV++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S+ F
Sbjct: 782 AVISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIYALDDKESRGRGKSKRATTKLFGFA 841
Query: 637 KSNI----EKSKLDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKG 681
+ K++LD DGLPH+G + +P Y TH LK K
Sbjct: 842 PGGLVKAEWKAQLDEDGLPHIGAKVSEGSLVGAWHTVQYDPATDTYINVDKQTHFLKYKD 901
Query: 682 SEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMP 739
E ++D V V + Q V+I++R PR PVIGDKFSSRHGQKGV SQLWP DMP
Sbjct: 902 GEEGFIDSVRVLGSETGNEVCQAVSIKYRVPRRPVIGDKFSSRHGQKGVLSQLWPATDMP 961
Query: 740 FCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESE 799
F +G++PD+IINPHAFPSRMTI M +ES+A K GSLHG ++TPF+ S + G
Sbjct: 962 FS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGSLHGLPQDSTPFQFSEEATAG--- 1017
Query: 800 KSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVR 859
D G+ L+ G+N+HG E +YSG+ G+E +I+IG VYYQRLRHMV+DKFQVR
Sbjct: 1018 ------DFFGKQLQRAGYNFHGNEPMYSGITGREFAADIYIGVVYYQRLRHMVNDKFQVR 1071
Query: 860 STGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 919
+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C C
Sbjct: 1072 TTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDPQRAWICRTC 1131
Query: 920 GSMLAT-----SFIQPQKLPRRE-------------------IGGLP--------PRKA- 946
GS ++T + P K P + +GGL R+A
Sbjct: 1132 GSFISTQVAVSQLLSPHKNPAMDAVVQSTASAIAKPLSGVSALGGLAGIVRCRRCAREAV 1191
Query: 947 ---PKKVICHACQTSK---GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
P+ + + G +T VA+P V +YL E AAM IKM +++N
Sbjct: 1192 FDDPRAEVWEDGSGKRYVGGSDTTVVAVPGVLKYLDVELAAMGIKMRFQVDN 1243
>D4AUL7_ARTBC (tr|D4AUL7) DNA-directed RNA polymerase OS=Arthroderma benhamiae
(strain ATCC MYA-4681 / CBS 112371) GN=ARB_07934 PE=3
SV=1
Length = 1243
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1073 (41%), Positives = 611/1073 (56%), Gaps = 129/1073 (12%)
Query: 2 STVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGI 61
+ +RNSF +R YT V +R VR DQ+S T L+YL + + F + EYL+PV +
Sbjct: 216 AIIRNSFQKRGSAYTKFGVQLRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVVM 275
Query: 62 VLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQ 119
+LKALI+T+D EI E+ +G++G + V DR +++ + + +R +
Sbjct: 276 ILKALIETNDREI--------FERLVGREGSLGIENTFVTDRVELLLRTYKAYGVHSRSK 327
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQ 171
C Y+G F+ +L ++ + V L+ V HL DN DKFN+++FM++
Sbjct: 328 CRAYLGSKFRFVLGMPEDIPEEDVGTEFLRKIVLPHLGNQNVTETQDN-DKFNMILFMIR 386
Query: 172 KLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFD 228
KL++LV G DNPD++ NQEVLL G+L + LKE+LE+WL+S + + ++
Sbjct: 387 KLYNLVAGDCAPDNPDAVSNQEVLLGGYLYGMLLKERLEEWLKSVGPMVRDWRMRNQDAK 446
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F++ ++ + R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ R
Sbjct: 447 FTDPKFEREFLTRIIGRTNENIGGAMEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYR 506
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS
Sbjct: 507 FISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTSN 566
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D G I +L G+T + P V LDG I+G +
Sbjct: 567 LDVSG-----------IPGVLAGLGVTSESSCSIEESIP----VQLDGKILGYCTPKQSR 611
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + +
Sbjct: 612 AIADTLRYWKVQGHKQIPVELEIGYVPSSNGGQYPGVYMFSEAARMYRPVKYLPL----- 666
Query: 465 KNIDLIGPFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+D +GPFEQ +MEI C D +G +TH E PT +LS++AN TP+SD NQS
Sbjct: 667 DKLDYVGPFEQPYMEIACVASDIRNG------VSTHIEFDPTHILSILANMTPFSDFNQS 720
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQM KQ M I +R D KLY LQT QTP+VR Y Y +D +P G NA+
Sbjct: 721 PRNMYQCQMGKQAMGTPGTAIDYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGMNAV 780
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------F 635
VAV++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S+ F
Sbjct: 781 VAVISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIYALDDKESRGRGKSKRAITKLFGF 840
Query: 636 RKSNI----EKSKLDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKK 680
+ K++LD DGLPH+G + +P Y TH LK K
Sbjct: 841 APGGLVKAEWKAQLDEDGLPHIGAKVSEGSLVGAWHTVQYDPATDTYINVDKQTHFLKYK 900
Query: 681 GSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDM 738
E ++D V V + Q ++I++R PR PVIGDKFSSRHGQKGV SQLWP DM
Sbjct: 901 DGEEGFIDSVRVLGSETGNEVCQAISIKYRVPRRPVIGDKFSSRHGQKGVLSQLWPATDM 960
Query: 739 PFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGES 798
PF +G++PD+IINPHAFPSRMTI M +ES+A K GSLHG ++TPF+ S + G
Sbjct: 961 PFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGSLHGLPQDSTPFQFSEEATAG-- 1017
Query: 799 EKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQV 858
D G+ L+ G+N+HG E +YSG+ G+E +I+IG VYYQRLRHMV+DKFQV
Sbjct: 1018 -------DFFGKQLQRAGYNFHGNEPMYSGITGREFAADIYIGVVYYQRLRHMVNDKFQV 1070
Query: 859 RSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSL 918
R+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C
Sbjct: 1071 RTTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSQRAWICRT 1130
Query: 919 CGSMLAT-----SFIQPQKLPRRE-------------------IGGLP--------PRKA 946
CGS ++T + P K P + +GGL R+A
Sbjct: 1131 CGSFISTQVAVSQLLSPHKNPAMDAVVQSTASAIAKPLSGVSALGGLAGIVRCRRCAREA 1190
Query: 947 ----PKKVICHACQTSK---GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
P+ + + G +T VA+P V +YL E AAM IKM +++N
Sbjct: 1191 VFDDPRAEVWEDGSGKRYVGGSDTTVVAVPGVLKYLDVELAAMGIKMRFQVDN 1243
>G0SBR6_CHATD (tr|G0SBR6) DNA-directed RNA polymerase OS=Chaetomium thermophilum
(strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0054520 PE=3 SV=1
Length = 1235
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1053 (41%), Positives = 613/1053 (58%), Gaps = 111/1053 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF+ R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 LAIIRPSFTNRGPSYTQYGIIVRSVRPDETSQTNVLHYLSDGNVTFRFSWRKNEYLVPVM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L N K + + DR +++ ++ L+T+ Q
Sbjct: 266 MILKALVETNDREIFEGLVGPPNSK------GIENTFLTDRVELLLRTYKKYGLYTKSQT 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+G F+ +L S V L+ V VHL + + DKF +L+FM +KL
Sbjct: 320 RAYLGSKFRVVLGVPDTMSDYEVGTEFLRKIVLVHLGCVNVTEEQDLDKFKMLLFMCRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL----QSGKDEMKRKSGTFDF 229
++LV G +DNPD++QNQE+LL G L + LKE+LE+ L ++ + R++ T F
Sbjct: 380 YALVAGDCAVDNPDAVQNQEILLGGFLYGMILKERLEELLSVSLRAALRDYLRRNPTISF 439
Query: 230 SEIFVVK----KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
+ K F +T I ++E L TG L + +GLDLQQ +G+TV A++LN+ R
Sbjct: 440 TSQTFQKDFPIAIFRRT-NENIGNALEYFLSTGNLQSPSGLDLQQVSGFTVVAEKLNFWR 498
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
F+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I +
Sbjct: 499 FISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAHKCKIMT-- 556
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVG-CIPSGEVE 404
D + +++++ V+ + E + V+LDG I+G C P +
Sbjct: 557 ----DTLDTSAVPGAVMELGVNDYSSAATS--------ESVVVMLDGRIIGWCTP--KAS 602
Query: 405 KIVAH-IRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
+I+A +R KV + IP LE+GYVP S GG+YPG+Y+ + P+R VRPV+ +++
Sbjct: 603 RIIAETLRRWKVEGNHGIPLQLEIGYVPPSKGGSYPGIYMASKPARMVRPVKYLALAKE- 661
Query: 464 NKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQ 521
D +GP EQ +M I C + P TH E PT +LS++AN TP+SD NQ
Sbjct: 662 ----DFVGPHEQPYMSIACTP------EEIIPGDHTHVEYDPTNILSILANMTPFSDFNQ 711
Query: 522 SPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA 581
SPRNMYQCQM KQTM I++R D K+Y LQT QTPIVR+ + Y D +P GTNA
Sbjct: 712 SPRNMYQCQMGKQTMGTPGAAIKYRTDNKMYRLQTGQTPIVRSPLHNVYGFDNFPNGTNA 771
Query: 582 IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIE 641
+VAV++YTGYDM+DAMI+NKS+ ERG HG IY+T+ + L + +R+ S + +
Sbjct: 772 VVAVISYTGYDMDDAMIINKSAHERGFGHGTIYKTKKISLKDD-TRTRTSKTITKMFGFA 830
Query: 642 ---------KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKKKGS 682
+ LD DGLPHVG+++R + C+ + S TH + K +
Sbjct: 831 PGTPIRPEYREMLDEDGLPHVGRLVREGDILCAWHTVSADYSGKLVNKDGITHWERYKDA 890
Query: 683 EPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E +V+ V V + LQ V+I+ R PR+PVIGDKFSSRHGQKGVCSQ WP +DMPF
Sbjct: 891 EDAFVEEVRVIGSETGNEPLQTVSIKLRIPRSPVIGDKFSSRHGQKGVCSQKWPAIDMPF 950
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR ++
Sbjct: 951 S-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFR---------FDE 1000
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G L + GFNYHG E +YSG+ G+E C+I+IG VYYQRLRHMV+DK+QVR+
Sbjct: 1001 EHTAADYFGHQLMKAGFNYHGNEPMYSGITGEEFACDIYIGVVYYQRLRHMVNDKYQVRT 1060
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V T QP GEMERD+LLAHG A+LL DRL CSDY + +C CG
Sbjct: 1061 TGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSRSWICRDCG 1120
Query: 921 SMLATSFIQPQKLP----RREIGGLPPRKAPK-----------KVICHACQTSKGME--- 962
S LA +QP P R+++G + R K K+ + +G++
Sbjct: 1121 SFLA---VQPTVSPFIGKRKQVGTVRCRNCAKRLDQIEDLDLMKLEGEIWEDGQGVQWIG 1177
Query: 963 -----TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
V +P ++L E AAM +K+ +++N
Sbjct: 1178 GENTTMVVVPGALKFLDVELAAMGVKLKYRVDN 1210
>G2RFH4_THITE (tr|G2RFH4) DNA-directed RNA polymerase OS=Thielavia terrestris
(strain ATCC 38088 / NRRL 8126) GN=THITE_2121926 PE=3
SV=1
Length = 1236
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1059 (41%), Positives = 608/1059 (57%), Gaps = 124/1059 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R SF+ R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 207 LAITRPSFTNRGPSYTPYGIIVRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 266
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L N K + + DR +++ + L+T+ Q
Sbjct: 267 MILKALVETNDREIFEGLVGPPNSK------GIENTFLTDRVELLLRTYKTYGLYTKTQT 320
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+ +L S V L+ V VHL + + DKF +L+FM +KL
Sbjct: 321 RAYLGEKFRVVLGVPDTMSDYEVGTEFLRKIVLVHLGCVDVTEEQDLDKFKMLLFMCRKL 380
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL----QSGKDEMKRKSGTFDF 229
++LV G +DNPD++QNQE+LL G L + LKEKL+++L + + R T F
Sbjct: 381 YALVAGDCAIDNPDAVQNQEILLGGFLYGMILKEKLDEFLSVSVRGALRDYLRNHATVSF 440
Query: 230 SE--------IFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRL 281
+ + + +K + I ++E L TG L + +GLDLQQ +G+TV A++L
Sbjct: 441 TSPTFQRDFPVAIFRKANEN-----IGNALEYFLSTGNLQSPSGLDLQQTSGFTVVAEKL 495
Query: 282 NYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI 341
N+LRF+SHFR VHRG+ FA L+TTTVR+LLPESWGFLCPVHTPDG PCGLLNH+ C+I
Sbjct: 496 NFLRFISHFRMVHRGSFFAQLKTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLAHKCKI 555
Query: 342 TSYFDSQGSIKDYFKIKISILDILVDSG--MTQLVPKLLLPGPPEVLTVLLDGCIVGCIP 399
+ DS LD+ G M V E + V+LDG I+G
Sbjct: 556 MT--DS--------------LDVSAVPGVAMELGVNDYSSAATSESVVVMLDGRIIGWCT 599
Query: 400 SGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISI 459
+ + +R KV IP LE+GYVP S GG+YPG+Y+ + P+R VRPV+ ++
Sbjct: 600 PRAAKGVADSLRRWKVEGGHGIPVQLEIGYVPPSRGGSYPGIYMSSRPARMVRPVKYLA- 658
Query: 460 LSNENKNIDLIGPFEQVFMEIRCPDG----GDGGRKSSFPATHEEIHPTGMLSVVANRTP 515
L E D +GP EQ +M I C + GD +TH E PT +LS++AN TP
Sbjct: 659 LGKE----DFVGPHEQPYMSIACTEAEVIPGD--------STHVEFDPTNILSILANMTP 706
Query: 516 WSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEY 575
+SD NQSPRNMYQCQM KQTM +++R D K Y LQT QTPIVR+ + Y D +
Sbjct: 707 FSDFNQSPRNMYQCQMGKQTMGTPGTALRYRTDNKTYRLQTGQTPIVRSPLHNTYGFDNF 766
Query: 576 PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMF 635
P GTNA+VAV++YTGYDM+DAMI+NKS+ ERG HG IY+T+ + L + +R+ S +
Sbjct: 767 PNGTNAVVAVISYTGYDMDDAMIINKSAHERGFGHGTIYKTKKISLKDDDTRARSSKAIV 826
Query: 636 RKSNI---------EKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THT 676
+ ++ LD DGLP+VG+++R + + + S TH
Sbjct: 827 KMFGFAPGSAVRASDREMLDEDGLPYVGRLVRQGDILYAWHTVSADYSGQLINRDGITHW 886
Query: 677 LKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLW 733
+ K SE +V+ V V D N+ LQ V+I+ R PR+PVIGDKFSSRHGQKGVCSQ W
Sbjct: 887 ERYKDSEDAFVEEVRVIGSDTGNEP-LQTVSIKLRVPRSPVIGDKFSSRHGQKGVCSQKW 945
Query: 734 PDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKK 793
P +DMPF +G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+
Sbjct: 946 PAIDMPFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFK----- 999
Query: 794 DNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVS 853
++ D G L + GFNYHG E +YSG+ G+E C+I+IG VYYQRLRHMV+
Sbjct: 1000 ----FDEENTAADYFGHQLMKAGFNYHGNEPMYSGITGEEFACDIYIGVVYYQRLRHMVN 1055
Query: 854 DKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIA 913
DK+QVR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY +
Sbjct: 1056 DKYQVRTTGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSKS 1115
Query: 914 DVCSLCGSMLATSFIQPQKLP----RREIGGLPPRKAPK-----------KVICHACQTS 958
+C CGS LA +QP P R+++G + R K K+ +
Sbjct: 1116 WICRSCGSFLA---VQPTVSPFIGKRKQVGTVRCRNCAKRLDQVEDLDLMKLDGEIWEDG 1172
Query: 959 KGME--------TVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+G++ V +P ++L AE AAM +K+ +++
Sbjct: 1173 QGVQWIGGENTTMVVVPGALKFLDAELAAMGVKLKYRVD 1211
>F2SKX1_TRIRC (tr|F2SKX1) DNA-directed RNA polymerase OS=Trichophyton rubrum
(strain ATCC MYA-4607 / CBS 118892) GN=TERG_02788 PE=3
SV=1
Length = 1243
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1070 (41%), Positives = 610/1070 (57%), Gaps = 127/1070 (11%)
Query: 4 VRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVL 63
+RNSF +R YT V +R VR DQ+S T L+YL + + F + EYL+PV ++L
Sbjct: 218 IRNSFQKRGSAYTKFGVQLRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMIL 277
Query: 64 KALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--VDDRARMIIEEVRQLSLFTRLQCL 121
KALI+T+D EI E+ +G++G + + DR +++ + +R +C
Sbjct: 278 KALIETNDREI--------FERLVGREGSLGIENTFITDRVELLLRTYKAYGAHSRSRCR 329
Query: 122 NYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKLF 174
Y+G F+ +L ++ + V L+ V HL + + DKFN+++FM++KL+
Sbjct: 330 AYLGSKFRFVLGMPEDTPEEDVGTEFLRKIVLPHLGNQNVTETQDNDKFNMILFMIRKLY 389
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD---EMKRKSGTFDFSE 231
+LV G DNPD++ NQEVLL G+L + LKE+LE+WL+S + + ++ F++
Sbjct: 390 NLVAGDCAPDNPDAVSNQEVLLGGYLYGMLLKERLEEWLKSVGPMVRDWRMRNQDAKFTD 449
Query: 232 IFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLS 288
++ K R I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF+S
Sbjct: 450 PKFEREFLTKIIGRTNENIGGAMEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRFIS 509
Query: 289 HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSYFDS 347
HFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I TS D
Sbjct: 510 HFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCLISTSNLDV 569
Query: 348 QGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIV 407
G I +L + G+T + P V LDG I+G + I
Sbjct: 570 SG-----------IPGVLAELGVTSESSCSIEESIP----VQLDGKILGYCTPKQSRTIA 614
Query: 408 AHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV IP +LE+GYVP S GG YPG+Y+F+ +R RPV+ + + +
Sbjct: 615 DTLRYWKVQGHKKIPVELEIGYVPSSNGGQYPGVYMFSEAARMYRPVKYLPL-----DKL 669
Query: 468 DLIGPFEQVFMEIRC--PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRN 525
D +G FEQ +MEI C D +G +TH E PT +LS++AN TP+SD NQSPRN
Sbjct: 670 DYVGSFEQPYMEIACVASDIRNG------VSTHIEFDPTHILSILANMTPFSDFNQSPRN 723
Query: 526 MYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAV 585
MYQCQM KQ M I +R D KLY LQT QTP+VR Y Y +D +P G NA+VAV
Sbjct: 724 MYQCQMGKQAMGTPGTAIDYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGMNAVVAV 783
Query: 586 LAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-------FRKS 638
++YTGYDM+DAMI+NKSS ERG +G IY+T+ L ++ SR S+ F
Sbjct: 784 ISYTGYDMDDAMIINKSSHERGFGYGTIYKTKIYALDDKESRGRGKSKRAITKLFGFAPG 843
Query: 639 NI----EKSKLDSDGLPHVGQMIRPD-----------EPYCSIYNASTSSTHTLKKKGSE 683
+ K++LD DGLPH+G + +P Y TH LK K E
Sbjct: 844 GLVKAEWKAQLDEDGLPHIGAKVSEGSLVGAWHTVQYDPATDTYINVDKQTHFLKYKDGE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
++D V V + Q V+I++R PR PVIGDKFSSRHGQKGV SQLWP DMPF
Sbjct: 904 EGFIDSVRVLGSETGNEVCQAVSIKYRVPRRPVIGDKFSSRHGQKGVLSQLWPATDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PD+IINPHAFPSRMTI M +ES+A K GSLHG ++TPF+ S + G
Sbjct: 964 -ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGSLHGLPQDSTPFQFSEEATAG----- 1017
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
D G+ L++ G+N+HG E +YSG+ G+E +I+IG VYYQRLRHMV+DKFQVR+T
Sbjct: 1018 ----DFFGKQLQKAGYNFHGNEPMYSGITGREFAADIYIGVVYYQRLRHMVNDKFQVRTT 1073
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V+ +T QP GEMERD+LLAHGAA+LL DRL CSD A +C CGS
Sbjct: 1074 GPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDSQRAWICRTCGS 1133
Query: 922 MLAT-----SFIQPQKLPRRE-------------------IGGLP--------PRKA--- 946
++T + P K P + +GGL R+A
Sbjct: 1134 FISTQVAVSQLLSPHKNPAMDAVVQSTASAIAKPLSGVSALGGLAGIVRCRRCAREAVFD 1193
Query: 947 -PKKVICHACQTSK---GMET--VAMPYVFRYLAAEFAAMNIKMTLKLNN 990
P+ + + G +T VA+P V +YL E AAM IKM +++N
Sbjct: 1194 DPRAEVWEDGSGKRYVGGSDTTVVAVPGVLKYLDVELAAMGIKMRFQVDN 1243
>L1IAI4_GUITH (tr|L1IAI4) DNA-directed RNA polymerase OS=Guillardia theta CCMP2712
GN=GUITHDRAFT_158927 PE=3 SV=1
Length = 1090
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/1002 (42%), Positives = 589/1002 (58%), Gaps = 95/1002 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF++R YT ++RCVR DQS T+ L+YL + L ++ +EYL+P
Sbjct: 170 MALIRPSFTKRGSSYTKFGCMMRCVREDQSGSTLTLHYLSTGNCTLSVKIRKQEYLIPAV 229
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEE-VRQLSLFTRLQ 119
++LKA+ +SD +I TN+ +G V DR + + + + + L T+
Sbjct: 230 MILKAMTGSSDEQIFTNVV----------QGDATNTFVSDRIEVALRDSTKYIGLRTKED 279
Query: 120 CLNYIGEHFQPILTE---LKNDSYDT-VAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFS 175
L Y+G+ F+ +L L +D D + + +L +Y F+HLD + DK+N L+ M+QKL++
Sbjct: 280 FLGYLGQRFRVVLIRSLYLPDDVSDVEIGQKLLDNYFFIHLDSDEDKWNCLVVMMQKLYA 339
Query: 176 LVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEM---KRKSGTF----D 228
LV G D+PDSL QEVLLPGHL+T+ +KEKL+D+L +D +R +F +
Sbjct: 340 LVSGAIQPDSPDSLHCQEVLLPGHLMTMMVKEKLQDYLAGIQDVFLKDQRPGSSFASQVN 399
Query: 229 FSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLS 288
++ ++ + P I IE + TG LV+ TGLDL Q +GYT+ A+RLN+LR+LS
Sbjct: 400 LADQSYIESLLMRNPV-DIGRKIEYFMSTGNLVSQTGLDLSQVSGYTIVAERLNFLRYLS 458
Query: 289 HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQ 348
HFR++HRG F +++T VRKLLPESWGF+CPVHTPDG PCGLLNH+T C + S+F
Sbjct: 459 HFRSIHRGQFFTTMKSTAVRKLLPESWGFVCPVHTPDGGPCGLLNHLTSVCTLHSHFVPP 518
Query: 349 GSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
++K +++ V +G +V E L ++LDG ++G + + E ++V
Sbjct: 519 AALKAVEDAVLTLGASPVSAGGLPVVMGR------EALPIMLDGRMIGRVGAQEAVQLVG 572
Query: 409 HIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R LK IP+ LE+ +VP G +PG++LFT+P+R +RPVR +S +E
Sbjct: 573 RMRLLKAEGLRGIPEFLEIAHVPPRTNGLWPGVFLFTTPARMMRPVRQLSSGQHE----- 627
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
IG FEQ+ MEI G TH E+ P MLSVVA TP+SD NQSPRNMYQ
Sbjct: 628 WIGTFEQIHMEIAV----MGKEVRPRQHTHMELSPMNMLSVVAQCTPFSDMNQSPRNMYQ 683
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM R D K+Y + TPQ P+VR +D+YPTGTNA+VAV++Y
Sbjct: 684 CQMGKQTMGTPMYAYNERVDNKVYRILTPQVPLVRNQAQDNLRMDDYPTGTNAVVAVISY 743
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFR-KSNIEKSKLDS 647
TG+DMEDAMI+NK + +RG +G +Y T VDLT+ + P SR K + LD
Sbjct: 744 TGFDMEDAMIINKGAYDRGFGNGHVYTTTIVDLTKS---APPGSRFDNPKDDSYVDHLDG 800
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKN-KKDLQKVNIR 706
DGLP VG +++ + + +T + + K +E V VD V + K LQK++I+
Sbjct: 801 DGLPQVGSILQQGQELYRSVDPATGRSKCVMHKSAEAVQVDAVRLLGDGPTKPLQKISIK 860
Query: 707 FRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAML 766
R+ R PVIGDKFSSRHGQKGV S LWP +MPF TGM PD+IINP+AFPSRMTI ML
Sbjct: 861 LRYDRRPVIGDKFSSRHGQKGVLSTLWPQENMPF-SETGMTPDVIINPNAFPSRMTIGML 919
Query: 767 LESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLY 826
+ES+A K G++HG F ++TPFR ++ +D G+ LR G+NYHG EVLY
Sbjct: 920 VESMAGKAGAMHGYFPDSTPFR---------FDEETRAIDHFGEQLRAAGYNYHGTEVLY 970
Query: 827 SGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEM 886
SGV G + +IF+G VYYQRLRHMVSDK+Q R+TG V++ TRQP FGEM
Sbjct: 971 SGVSGMMMEAQIFMGLVYYQRLRHMVSDKYQCRATGPVNKYTRQPVKGRKAGGGVRFGEM 1030
Query: 887 ERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKA 946
ERD LLAHGA++LL R
Sbjct: 1031 ERDGLLAHGASFLLRQR------------------------------------------G 1048
Query: 947 PKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+++ CH C+T + VA+P+VFRYL AE AAMNI + +L
Sbjct: 1049 KQRLYCHKCKTGASVSCVAVPFVFRYLLAELAAMNINVRCEL 1090
>C1G8U3_PARBD (tr|C1G8U3) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_03679 PE=3 SV=1
Length = 1242
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1074 (41%), Positives = 604/1074 (56%), Gaps = 130/1074 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R+SF +R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRSSFMKRGPTYTKFGIQIRSVRPDQTSQTNFLHYLSDGNVTFRFTWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LK L+ T+D +I L +G + V DR +++ + + R
Sbjct: 275 MILKGLVQTNDRDIFERLVG------HEGSEGIKNSFVTDRVELLLRTYKGYGIHGRDDI 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+P+L + + V L+ V HL + + DKFN+++FM++KL
Sbjct: 329 RAYLGEKFRPVLGMPTDIPDEAVGVEFLRKVVLPHLGNHNVTDSQDNDKFNMILFMIRKL 388
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG---KDEMKRKSGTFDFS 230
++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S E K+ F
Sbjct: 389 YTLVAGDCAPDNPDAVSNQEVLLGGFLYGMLLKERLEEWLRSFGPIAQEWSVKNQNARFI 448
Query: 231 EIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFL 287
+ K+ + AR I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF+
Sbjct: 449 DPKFEKEFLSRIVARTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRFI 508
Query: 288 SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDS 347
SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C
Sbjct: 509 SHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKC-------- 560
Query: 348 QGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVL-----LDGCIVGCIPSGE 402
KI+ S LD+ SG+ Q++ L + V +DG I+G +
Sbjct: 561 --------KIETSNLDV---SGVPQIISNLGVTSESSVSLEESVVVQMDGRILGYCSPKQ 609
Query: 403 VEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSN 462
I +R KV + +P +LE+GYVP S G YPG+YLF+ +R VRPV+ + +
Sbjct: 610 ARIISDTLRYWKVEGNKSLPVELEIGYVPNSNRGQYPGIYLFSQCARMVRPVKYLPL--- 666
Query: 463 ENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQ 521
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD NQ
Sbjct: 667 --DKLDYVGPFEQPFMEIACVPSDIISG-----VSTHVEFDPTYILSIVANMTPFSDFNQ 719
Query: 522 SPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA 581
SPRNMYQCQM KQ M +IQ+R D KLY LQT QTPIVR Y Y +D +P G NA
Sbjct: 720 SPRNMYQCQMGKQAMGTPGTSIQYRTDNKLYRLQTGQTPIVRPPLYNCYGLDNFPNGMNA 779
Query: 582 IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM------- 634
+VAVL+YTGYDM+DAMI+N+S+ +RG G IY+T+ L ++ SR ++
Sbjct: 780 VVAVLSYTGYDMDDAMIINRSAHDRGFGWGTIYKTKVYSLDDKESRGRGKAKREIAKLFG 839
Query: 635 FRKSNIEKSK----LDSDGLPHVG------------QMIRPDEPYCSIYNASTSSTHTLK 678
F + K + LD DGLPH+G +R D S N TH LK
Sbjct: 840 FAPGGLIKGEWRQTLDEDGLPHIGVRVTEGSIVAAWHTVRFDAVSNSYINID-RQTHFLK 898
Query: 679 KKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDV 736
K +E Y+D V + Q ++I++R PR PVIGDKFSSRHGQKGVCSQLWP +
Sbjct: 899 YKDTEEGYIDSVRILGSETGGDPCQAISIKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAI 958
Query: 737 DMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNG 796
DMPF +G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR S + G
Sbjct: 959 DMPFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDSTPFRFSEEHTAG 1017
Query: 797 ESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKF 856
D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DKF
Sbjct: 1018 ---------DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDKF 1068
Query: 857 QVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVC 916
QVR+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD + +C
Sbjct: 1069 QVRTTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDITRSWIC 1128
Query: 917 SLCGSMLATS-----FIQPQKLP------RREIGGLPPRKAPKK-------VICHACQTS 958
CGS L+T ++ P K P + G + P A V C C
Sbjct: 1129 RTCGSFLSTQVAVSKYVAPSKNPAMAAAAKSSSGLVKPGGAVSALGGTSGIVRCRRCARE 1188
Query: 959 KGME----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V +YL E AAM +KMT K+NN
Sbjct: 1189 AVFDDPRAEVWEDGEGRRFVGGDDTTVVAVPGVLKYLDVELAAMGVKMTFKVNN 1242
>G4UA57_NEUT9 (tr|G4UA57) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_76309 PE=3 SV=1
Length = 1234
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1060 (42%), Positives = 609/1060 (57%), Gaps = 127/1060 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR SF R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 209 LAIVRPSFQNRGASYTPYGIIMRSVRPDETSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 268
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++KAL++T+D EI L K V + DR +++ ++ L+++ Q
Sbjct: 269 MIMKALVETNDREIFEGLVGPPQSK------GVANTFLTDRVELLLRTYKKYGLYSKTQT 322
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+G+ F+ +L S V L+ V VHL + DKFN+L+FM +KL
Sbjct: 323 RAYLGQKFRVVLGVPDTMSDYEVGTEFLRKIVLVHLGCQDVTEQQDADKFNMLLFMCRKL 382
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL-----QSGKDEMKR------ 222
++LV G +DNPD++QNQE+LL G L +KE+LE+ L S +D ++R
Sbjct: 383 YALVAGDCAVDNPDAVQNQEILLGGFLYGQIIKERLEELLTVSFRASLRDYLRRNPTVSF 442
Query: 223 KSGTF--DFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADR 280
+S TF DF I + ++ + I S+E L TG LV+ +GLDLQQ +G+TV A++
Sbjct: 443 QSDTFLKDFP-IAIFRRANEN-----IGQSLEYFLSTGNLVSPSGLDLQQVSGFTVVAEK 496
Query: 281 LNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCR 340
LN+LRF+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+
Sbjct: 497 LNFLRFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCK 556
Query: 341 I-TSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIP 399
I T D+ + F++ + + + S T E + V+LDG IVG
Sbjct: 557 IMTESVDASTIPRLAFELGV----VNISSAATS-----------ESVVVMLDGRIVGWCT 601
Query: 400 SGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISI 459
E + I +R KV+ +P LE+GYVP S GG+YPGLY+ + P+R VRPV+ + +
Sbjct: 602 PEECKSIAETLRYWKVNGENGVPLQLEIGYVPPSNGGSYPGLYMSSQPARMVRPVKYLPL 661
Query: 460 LSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWS 517
+ D +GP EQ +M I C + + P +TH E PT +LS++AN TP+S
Sbjct: 662 -----QKEDFVGPQEQPYMSIACTE------QEVIPGDSTHVEFDPTNILSILANMTPFS 710
Query: 518 DHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPT 577
D NQSPRNMYQCQM KQTM + + HR D K+Y LQT QTP+VR + Y D +P
Sbjct: 711 DFNQSPRNMYQCQMGKQTMGTPATALAHRTDNKMYRLQTGQTPVVRAPLHNTYGFDNFPN 770
Query: 578 GTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS--RMF 635
G NA+VAV++YTGYDM+DAMILNKS+ ERG HG IY+T+ V L + S +MF
Sbjct: 771 GMNAVVAVISYTGYDMDDAMILNKSAHERGFGHGSIYKTKKVSLKDDSRTRSAKSIVKMF 830
Query: 636 R---KSNIEKSK---LDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKK 679
S I +S LD+DGLP VG+++R + C+ + S TH +
Sbjct: 831 GFAPNSTIRESTRDMLDNDGLPRVGRLLREGDVICAWHTVSADYNGQLVNRDGVTHYERY 890
Query: 680 KGSEPVYVDYVAVDVKNK--KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVD 737
K SE +V+ V V + + LQ V+I+ R PR+PVIGDKFSSRHGQKGV SQ WP D
Sbjct: 891 KDSEDAFVEEVRVIGADNGTEPLQTVSIKLRIPRSPVIGDKFSSRHGQKGVLSQKWPATD 950
Query: 738 MPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGE 797
MPF TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ + G
Sbjct: 951 MPFS-ETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEQNTAG- 1008
Query: 798 SEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQ 857
D G L + G+NYHG E LYSG+ G+E +I+IG VYYQRLRHMV+DK+Q
Sbjct: 1009 --------DYFGHQLMKAGYNYHGNEPLYSGITGEEFQADIYIGVVYYQRLRHMVNDKYQ 1060
Query: 858 VRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 917
VR+TG V T QP GEMERD+LLAHG ++LL DRL CSDY + +C
Sbjct: 1061 VRTTGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTSFLLQDRLLNCSDYSKSWMCR 1120
Query: 918 LCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHAC---------------------- 955
CGS L+T QP P IG RKA V C C
Sbjct: 1121 QCGSFLST---QPTVSPF--IG---KRKAVSTVRCRNCAVRLDDMEDVDLMQIDGEIWED 1172
Query: 956 ----QTSKGMET--VAMPYVFRYLAAEFAAMNIKMTLKLN 989
Q G T VA+P +YL E AAM IK+ K++
Sbjct: 1173 GSGTQWIGGENTTIVAVPGALKYLDVELAAMGIKLKYKVD 1212
>F8N0H1_NEUT8 (tr|F8N0H1) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2508 / ATCC MYA-4615 / P0657)
GN=NEUTE1DRAFT_74716 PE=3 SV=1
Length = 1234
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1060 (42%), Positives = 609/1060 (57%), Gaps = 127/1060 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ VR SF R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 209 LAIVRPSFQNRGASYTPYGIIMRSVRPDETSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 268
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++KAL++T+D EI L K V + DR +++ ++ L+++ Q
Sbjct: 269 MIMKALVETNDREIFEGLVGPPQSK------GVANTFLTDRVELLLRTYKKYGLYSKTQT 322
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+G+ F+ +L S V L+ V VHL + DKFN+L+FM +KL
Sbjct: 323 RAYLGQKFRVVLGVPDTMSDYEVGTEFLRKIVLVHLGCQDVTEQQDADKFNMLLFMCRKL 382
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL-----QSGKDEMKR------ 222
++LV G +DNPD++QNQE+LL G L +KE+LE+ L S +D ++R
Sbjct: 383 YALVAGDCAVDNPDAVQNQEILLGGFLYGQIIKERLEELLTVSFRASLRDYLRRNPTVSF 442
Query: 223 KSGTF--DFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADR 280
+S TF DF I + ++ + I S+E L TG LV+ +GLDLQQ +G+TV A++
Sbjct: 443 QSDTFLKDFP-IAIFRRANEN-----IGQSLEYFLSTGNLVSPSGLDLQQVSGFTVVAEK 496
Query: 281 LNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCR 340
LN+LRF+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+
Sbjct: 497 LNFLRFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCK 556
Query: 341 I-TSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIP 399
I T D+ + F++ + + + S T E + V+LDG IVG
Sbjct: 557 IMTESVDASTIPRLAFELGV----VNISSAATS-----------ESVVVMLDGRIVGWCT 601
Query: 400 SGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISI 459
E + I +R KV+ +P LE+GYVP S GG+YPGLY+ + P+R VRPV+ + +
Sbjct: 602 PEECKSIAETLRYWKVNGENGVPLQLEIGYVPPSNGGSYPGLYMSSQPARMVRPVKYLPL 661
Query: 460 LSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWS 517
+ D +GP EQ +M I C + + P +TH E PT +LS++AN TP+S
Sbjct: 662 -----QKEDFVGPQEQPYMSIACTE------QEVIPGDSTHVEFDPTNILSILANMTPFS 710
Query: 518 DHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPT 577
D NQSPRNMYQCQM KQTM + + HR D K+Y LQT QTP+VR + Y D +P
Sbjct: 711 DFNQSPRNMYQCQMGKQTMGTPATALAHRTDNKMYRLQTGQTPVVRAPLHNTYGFDNFPN 770
Query: 578 GTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS--RMF 635
G NA+VAV++YTGYDM+DAMILNKS+ ERG HG IY+T+ V L + S +MF
Sbjct: 771 GMNAVVAVISYTGYDMDDAMILNKSAHERGFGHGSIYKTKKVSLKDDSRTRSAKSIVKMF 830
Query: 636 R---KSNIEKSK---LDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKK 679
S I +S LD+DGLP VG+++R + C+ + S TH +
Sbjct: 831 GFAPNSTIRESTRDMLDNDGLPRVGRLLREGDVICAWHTVSADYNGQLVNRDGVTHYERY 890
Query: 680 KGSEPVYVDYVAVDVKNK--KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVD 737
K SE +V+ V V + + LQ V+I+ R PR+PVIGDKFSSRHGQKGV SQ WP D
Sbjct: 891 KDSEDAFVEEVRVIGADNGTEPLQTVSIKLRIPRSPVIGDKFSSRHGQKGVLSQKWPATD 950
Query: 738 MPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGE 797
MPF TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ + G
Sbjct: 951 MPFS-ETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEQNTAG- 1008
Query: 798 SEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQ 857
D G L + G+NYHG E LYSG+ G+E +I+IG VYYQRLRHMV+DK+Q
Sbjct: 1009 --------DYFGHQLMKAGYNYHGNEPLYSGITGEEFQADIYIGVVYYQRLRHMVNDKYQ 1060
Query: 858 VRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 917
VR+TG V T QP GEMERD+LLAHG ++LL DRL CSDY + +C
Sbjct: 1061 VRTTGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTSFLLQDRLLNCSDYSKSWMCR 1120
Query: 918 LCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHAC---------------------- 955
CGS L+T QP P IG RKA V C C
Sbjct: 1121 QCGSFLST---QPTVSPF--IG---KRKAVSTVRCRNCAVRLDDMEDVDLMQIDGEIWED 1172
Query: 956 ----QTSKGMET--VAMPYVFRYLAAEFAAMNIKMTLKLN 989
Q G T VA+P +YL E AAM IK+ K++
Sbjct: 1173 GSGTQWIGGENTTIVAVPGALKYLDVELAAMGIKLKYKVD 1212
>A7TIY2_VANPO (tr|A7TIY2) DNA-directed RNA polymerase OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=Kpol_541p37 PE=3 SV=1
Length = 1204
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1026 (43%), Positives = 602/1026 (58%), Gaps = 85/1026 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT + IR VR DQ+S T L+YL + F + EYL+P
Sbjct: 215 MAIIRPSFANRGASYTQYGIQIRSVRNDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPAV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIE--EVRQLSLFTRL 118
++LKAL DTSD EI + + + DR +++ + R L R
Sbjct: 275 MILKALCDTSDREIFDGIIGS----------DIKNSFLTDRLELLLRGFKKRYPQLQNRT 324
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD--DNFDKFNLLIFMLQKLFSL 176
Q L YIG+ F+ + + S V + VL V VHL +N DK +L+FM++KL+SL
Sbjct: 325 QVLQYIGDKFRVVFQASPDKSDYDVGQEVLNRIVLVHLGTGNNEDKSRMLMFMIRKLYSL 384
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIF 233
V G DNPD+ Q+QEVLL G L + LKEK++++LQS +++ + +F +
Sbjct: 385 VAGECCPDNPDATQHQEVLLGGFLYGMILKEKMDEYLQSIIAQIRADINRGMAINFKDRK 444
Query: 234 VVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
+ + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 445 YMSRVLMRV-NENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMV 503
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q +
Sbjct: 504 HRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRISTI---QSDVS- 559
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
I ++L G+T + P + V LDG IVG + E + + +R
Sbjct: 560 ------KIPELLYSLGVTP--ASQTVAAGPSLCCVQLDGKIVGWVSHDEGKIVADTLRFW 611
Query: 414 KVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGP 472
KV + +P DLE+GYVP S G YPGLY+F SR +RPVR + L E D++GP
Sbjct: 612 KVEGKTPGLPLDLEIGYVPPSSSGQYPGLYIFGGHSRMMRPVRYLP-LGKE----DIVGP 666
Query: 473 FEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
FEQV+M I P + S H E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 667 FEQVYMNIAVTPQEIENNIHS-----HVEFTPTNILSILANLTPFSDFNQSPRNMYQCQM 721
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
KQTM + HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV++YTGY
Sbjct: 722 GKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGY 781
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----SKLD 646
DM+DAMI+NKS+ ERG +G +Y+ E VDL+ SR DP ++ F E KLD
Sbjct: 782 DMDDAMIINKSADERGFGYGTMYKVEKVDLSMNRSRGDPITQHFGFGPDEWPKEWLEKLD 841
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDLQKV 703
DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++LQ V
Sbjct: 842 EDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQELQTV 901
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI
Sbjct: 902 SIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDVIINPHAFPSRMTI 960
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
M +ES+A K G+LHG +ATP+ ++S D G L + G+NYHG E
Sbjct: 961 GMFVESLAGKAGALHGTAHDATPW---------TFDESDTPADYFGDQLLKAGYNYHGNE 1011
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
+YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1012 PMYSGATGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGGIRV 1071
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQ-------KLPRR 936
GEMERD+L+ HG ++LL DRL CSDY VC CGS+L T P+ + R
Sbjct: 1072 GEMERDALIGHGTSFLLQDRLLNCSDYTQTAVCRECGSILTTQQSVPKIGSVSTVRCRRC 1131
Query: 937 EIGGLPPRKAPKKV-------------ICHACQTSK---GME--TVAMPYVFRYLAAEFA 978
I +K+ K I Q +K G E TVA+P+V +YL +E
Sbjct: 1132 AIDFDEAKKSLSKYQTDDEKIYIDDSEIWEDGQGNKFVGGGETTTVAIPFVLKYLDSELN 1191
Query: 979 AMNIKM 984
AM I+M
Sbjct: 1192 AMGIRM 1197
>Q2HEC1_CHAGB (tr|Q2HEC1) DNA-directed RNA polymerase OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=CHGG_01433 PE=3 SV=1
Length = 1188
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1055 (41%), Positives = 616/1055 (58%), Gaps = 117/1055 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF+ R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 160 LAIIRPSFTNRGPSYTPYGIIVRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 219
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI L N K + + DR +++ + L+T+ Q
Sbjct: 220 MILKALIETNDREIFEGLVGPPNSK------GIENTFLTDRVELLLRTYKTYGLYTKTQT 273
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+ +L + S V L+ V V+L + + DKF +L+FM +KL
Sbjct: 274 RAYLGEKFRVVLGVPETMSDYEVGTEFLRRIVLVNLGCVDVTEEQDLDKFKMLLFMCRKL 333
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRK-SGTF 227
++LV G +DNPD++QNQE+LL G L + LKE+L++ L +D ++R S +F
Sbjct: 334 YALVAGDCAVDNPDAVQNQEILLGGFLYGMVLKERLDELLSVSLRLALRDYLRRNPSQSF 393
Query: 228 ---DFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
F++ F + F +T + ++E L TG L + +GLDLQQ +G+TV A++LN+L
Sbjct: 394 TSSGFTKDFPIA-IFRRT-NENLGNALEYFLSTGNLQSPSGLDLQQTSGFTVVAEKLNFL 451
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNHM C+I
Sbjct: 452 RFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHMAHKCKI--- 508
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
I D + ++ + ++ G+ E + V+LDG I+G +
Sbjct: 509 ------ITDSVDVS-AVPGVAMELGVNDYSSA----ATSESVVVMLDGRIIGWCTPNAAK 557
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
+ ++R KV IP LE+GYVP S GG+YPG+Y+ + SR VRPV+ + L E
Sbjct: 558 AVADNLRRWKVEGGHGIPILLEIGYVPPSKGGSYPGIYMSSQSSRMVRPVKYLP-LGKE- 615
Query: 465 KNIDLIGPFEQVFMEIRCPDG----GDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHN 520
D +GP EQ +M I C DG GD +TH E PT +LS++AN TP+SD N
Sbjct: 616 ---DFVGPHEQPYMSIACTDGEVLPGD--------STHVEFDPTHILSILANMTPFSDFN 664
Query: 521 QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN 580
QSPRNMYQCQM KQTM ++HR D K+Y LQT QTPIVR + Y D +P G N
Sbjct: 665 QSPRNMYQCQMGKQTMGTPGTALRHRTDNKMYRLQTGQTPIVRAPLHNTYGFDNFPNGMN 724
Query: 581 AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPS---SRMF-- 635
A+VAV++YTGYDM+DAMI+NKS+ ERG HG IY+T+ V L + SR+ S S+MF
Sbjct: 725 AVVAVISYTGYDMDDAMIINKSAHERGFGHGTIYKTKKVSLKDD-SRTRTSKTISKMFGF 783
Query: 636 ------RKSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKK 679
R S ++ LD DGLP+VG+++R + C+ + S TH +
Sbjct: 784 APGSPVRAS--DREMLDEDGLPYVGRLVREGDILCAWHTVSADYSGQLINRDGITHWERY 841
Query: 680 KGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVD 737
K +E +++ V V + LQ V+I+ R PR+P+IGDKFSSRHGQKGV SQ WP +D
Sbjct: 842 KEAEDAFIEEVRVIGSDSGTEPLQTVSIKLRIPRSPIIGDKFSSRHGQKGVASQKWPAID 901
Query: 738 MPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGE 797
MPF TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ + + G
Sbjct: 902 MPFS-ETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFNEEHTAG- 959
Query: 798 SEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQ 857
D G L + G+NYHG E +YSG+ G+E C+I+IG VYYQRLRHMV+DK+Q
Sbjct: 960 --------DYFGHQLMKAGYNYHGNEPMYSGITGEEFACDIYIGVVYYQRLRHMVNDKYQ 1011
Query: 858 VRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 917
VR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY + +C
Sbjct: 1012 VRTTGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSKSWICR 1071
Query: 918 LCGSMLATSFIQPQKLP----RREIGGLPPRKAPKKV--------------ICHACQTSK 959
CGS LA +QP P R+++G + R +++ I Q +
Sbjct: 1072 GCGSFLA---VQPTVSPFIGKRKQVGTVRCRNCAQRLDQIEGLDLMKLDGEIWEDGQGVQ 1128
Query: 960 --GMETVAM---PYVFRYLAAEFAAMNIKMTLKLN 989
G E AM P ++L E AAM +K+ +++
Sbjct: 1129 WIGGENTAMVVVPGALKFLDVELAAMGVKLKYRVD 1163
>R8BST0_9PEZI (tr|R8BST0) Putative dna-directed rna polymerase i subunit rpa2
protein OS=Togninia minima UCRPA7 GN=UCRPA7_2056 PE=4
SV=1
Length = 1048
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/1049 (41%), Positives = 607/1049 (57%), Gaps = 113/1049 (10%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF R YT +++R VR D++S T L+YL + + F + EYL+PV +++K
Sbjct: 12 RPSFKNRGPAYTPYGIIVRSVRPDETSQTNVLHYLDDGNVTFRFSWRKNEYLIPVMMIMK 71
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL++TSD EI L + K A+ V DR +++ + L+T+ + Y+
Sbjct: 72 ALVETSDREIFEGLVGPPDSK------AINNTFVTDRVELLLRTYKTYGLYTKTKTRAYL 125
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKLFSLV 177
GE F+ +L + S V L+ V VHL D + DKF +L+FM++KL+SLV
Sbjct: 126 GEKFRVVLGVPETMSNYDVGTEFLRRIVLVHLGNIEVTEDQDADKFKMLLFMIRKLYSLV 185
Query: 178 DGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFDFSEI 232
G +DNPD++QNQE+LL G L LKE+L++ L G ++ +R +E
Sbjct: 186 AGDCSVDNPDAVQNQEILLGGFLYGQILKERLDEMLSVGVRGALREYFRRYPSNLFTTET 245
Query: 233 FVV---KKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
F F +T + ++E L TG LV+ +GLDLQQ +G+TV A++LN+LRF+SH
Sbjct: 246 FAKDFPNAIFRRT-TENLGQALEYFLSTGNLVSPSGLDLQQTSGFTVVAEKLNFLRFISH 304
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I + +
Sbjct: 305 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAHKCKIMTE-NVDA 363
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
S+ ++ ++ S T E + V+LDG I+G E ++I
Sbjct: 364 SVIPQLATELGAVE--TSSSATD-----------ESVVVMLDGKIIGWCTPKESKRIADT 410
Query: 410 IRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDL 469
R KV S IP LE+GYVP S GG+YPG+Y+ + P+R VRPV+ + + + D
Sbjct: 411 FRHWKVEGSHGIPVHLEIGYVPPSNGGSYPGVYMSSQPARMVRPVKYLPL-----EKEDF 465
Query: 470 IGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
+GP EQ +M I C + S ++H E PT +LS++AN TP+SD NQSPRNMYQC
Sbjct: 466 VGPHEQPYMSIACTEP----EIISGESSHVEFDPTNILSILANMTPFSDFNQSPRNMYQC 521
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QM KQTM ++++R D K Y LQT QTPIVR + Y D +P GTNA+VAV++YT
Sbjct: 522 QMGKQTMGTPGSSLRYRTDNKSYRLQTGQTPIVRAPLHNAYGFDNFPNGTNAVVAVISYT 581
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPS---SRMFRKS------NI 640
GYDM+DAMI+NKS+ ERG HG IY+T+ + L + SR+ S +MF +
Sbjct: 582 GYDMDDAMIINKSAHERGFGHGTIYKTKKISLKDD-SRTRSSKNIEKMFGFAPGSTIRGW 640
Query: 641 EKSKLDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKKKGSEPVYVDYV 690
++ LD DGLP++G+ + + C+ + ++ + TH K K SE Y++ V
Sbjct: 641 QRDMLDEDGLPYIGRKVEEGDVICAWHTVTSDRLGNLVNNDNQTHFEKYKDSETAYIEEV 700
Query: 691 -AVDVKNKKDL-QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRP 748
+ ++ +L Q ++I+FR PR+PVIGDKFSSRHGQKGV SQ WP +DMPF +G++P
Sbjct: 701 RLIGSESGTELGQTISIKFRIPRSPVIGDKFSSRHGQKGVASQKWPSIDMPFS-ESGIQP 759
Query: 749 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDL 808
D+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ +DN + D
Sbjct: 760 DVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFK--FDEDNTAA-------DYF 810
Query: 809 GQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVT 868
G L + G+NYHG E +YSG+ G+E C+I+IG VYYQRLRHMV+DK+QVR+TG V T
Sbjct: 811 GHQLMKAGYNYHGNEPMYSGITGEEFACDIYIGVVYYQRLRHMVNDKYQVRTTGPVVPTT 870
Query: 869 RQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI 928
QP GEMERD+LLAHG A+LL DRL CSDY +C CGS L+ +
Sbjct: 871 GQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTRTWICRTCGSFLS---V 927
Query: 929 QPQKLPRREIGGLPPRKAPKKVICHACQT--------------------SKGME------ 962
QP P + RKA V C C T +G E
Sbjct: 928 QPTVSPF-----IGKRKAVNTVRCRNCATRLDTIEDLDLTKLDGEIWTDGQGHEWIGGED 982
Query: 963 --TVAMPYVFRYLAAEFAAMNIKMTLKLN 989
V +P ++L E AAM +K+ +++
Sbjct: 983 TTVVVVPGALKFLDVELAAMGVKLKYRVD 1011
>G9NNK1_HYPAI (tr|G9NNK1) DNA-directed RNA polymerase OS=Hypocrea atroviridis
(strain ATCC 20476 / IMI 206040) GN=TRIATDRAFT_132650
PE=3 SV=1
Length = 1230
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1055 (41%), Positives = 605/1055 (57%), Gaps = 116/1055 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF+ R GYT +++R VR D++S T L+YL++ + F + EYL+PV
Sbjct: 206 MAINRPSFTNRGAGYTTYGIILRSVRPDETSQTNVLHYLKDGNVTFRFSWRKNEYLIPVI 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L K A + DR +++ + L+++ +
Sbjct: 266 MILKALVETNDREIFEGLIGPMGSK------AAKNTFLTDRVELLLRTYKAYRLYSKSET 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+G+ F+ +L + S V L+ V VHL + + DKF +++FM++KL
Sbjct: 320 RAYLGQKFRVVLGVPETMSDYEVGTEFLRRIVCVHLGNVDVTEKQDLDKFQMVLFMIRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFD 228
++L G +DNPD++QNQE+LL G L LKE+L+D+L + +D ++R
Sbjct: 380 YALAAGECAVDNPDAIQNQEILLGGFLYGQILKERLDDFLGTSVRGAIRDYLRRHPAVNF 439
Query: 229 FSEIFVVKKCFD----KTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
SE F KK F + I+ +E L TG LV+ +GLDLQQ AG+TV A++LN+L
Sbjct: 440 TSEEF--KKEFPGGIFRKSNENIANGLEYFLSTGNLVSPSGLDLQQTAGFTVVAEKLNFL 497
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TS 343
RF+SHFR VHRGA FA L+TT VRKLLPESWGF+CPVHTPDG PCGLLNHMT C+I T
Sbjct: 498 RFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGSPCGLLNHMTHKCKIMTD 557
Query: 344 YFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEV 403
+ D + + + + + S T E + ++LDG ++G E
Sbjct: 558 HLD----VSNVPALVAELGAVETSSASTD-----------ESVVIMLDGKVIGWSTPKES 602
Query: 404 EKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
+I +R KV + +P LE+GYVP S GG+YPGLYL ++P+R VRPV+ + +
Sbjct: 603 LRIADCLRYWKVEGTHRVPLQLEIGYVPPSNGGSYPGLYLSSTPARMVRPVKYLPL---- 658
Query: 464 NKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+ D +GP EQ +M I P + G +TH E PT MLS++AN TP+SD NQS
Sbjct: 659 -QKEDFVGPHEQPYMSIAVVPQEIESGV-----STHVEYDPTNMLSILANMTPFSDFNQS 712
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQM KQTM I+HR D K Y +QT QTPIVR + Y D +P G NA+
Sbjct: 713 PRNMYQCQMGKQTMGTPGTAIRHRTDNKSYRIQTGQTPIVRAPLHNTYGFDNFPNGMNAV 772
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS--RMF----- 635
VAV++YTGYDM+DAMI+NKS+ ERG HG +Y+T+ + L + S +MF
Sbjct: 773 VAVISYTGYDMDDAMIINKSAHERGFGHGTVYKTKKITLKDDSRTRAAKSVVKMFGFAPH 832
Query: 636 -RKSNIEKSKLDSDGLPHVGQMIRPDEPYCSI------YNASTSS----THTLKKKGSEP 684
S + LD DGLPHVG+M++ D+ C+ YN + + TH K K SE
Sbjct: 833 SYVSAAYQGMLDDDGLPHVGRMVKEDDVLCAYHTVTPDYNGNLVNLDGITHYEKYKDSEV 892
Query: 685 VYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+++ V + + LQ ++I+ R PR+PVIGDKFSSRHGQKGV SQ WP DMPF
Sbjct: 893 GFIEEVRLIGAESGSEPLQTISIKIRIPRSPVIGDKFSSRHGQKGVLSQKWPATDMPFS- 951
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
TG++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR + G
Sbjct: 952 ETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFRFDEENTAG------ 1005
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
D G L + GFNYHG E +YSG+ G+EL +I++G VYYQRLRHMV+DK+QVR+TG
Sbjct: 1006 ---DYFGHQLMKAGFNYHGNEPMYSGITGEELGADIYVGVVYYQRLRHMVNDKYQVRTTG 1062
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V T QP GEMERD+LLAHG A+LL DRL CSDY + +C CGS
Sbjct: 1063 PVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKSWICRRCGSF 1122
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT----SKGME---------------- 962
L+ Q P + +KAP V C C S+G++
Sbjct: 1123 LSVQPTVSQFAPGK-------KKAPSMVRCRNCAVKLDDSEGIDLTEIQGEIWEDGQGNC 1175
Query: 963 --------TVAMPYVFRYLAAEFAAMNIKMTLKLN 989
V +P ++L E AAM +K+ +++
Sbjct: 1176 WVGGDQTTQVVVPGALKFLDVELAAMGVKLKYRID 1210
>C0S2A9_PARBP (tr|C0S2A9) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_01724 PE=3 SV=1
Length = 1242
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1075 (41%), Positives = 604/1075 (56%), Gaps = 132/1075 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R+SF +R YT + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 215 MAIIRSSFMKRGPTYTKFGIQIRSVRPDQTSQTNFLHYLSDGNVTFRFTWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LK L+ T+D +I L +G + V DR +++ + + R
Sbjct: 275 MILKGLVQTNDRDIFERLVG------HEGSEGIKNSFVTDRVELLLRTYKGYGIHGRDDI 328
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+P+L + + V L+ V HL DN DKFN+++FM++K
Sbjct: 329 RAYLGEKFRPVLGMPTDIPDEAVGVEFLRKVVLPHLGNHNVTDSQDN-DKFNMILFMIRK 387
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG---KDEMKRKSGTFDF 229
L++LV G DNPD++ NQEVLL G L + LKE+LE+WL+S + K+ F
Sbjct: 388 LYTLVAGDCAPDNPDAVSNQEVLLGGFLYGMLLKERLEEWLRSFGPIAQDWSVKNQNARF 447
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
+ K+ + AR I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 448 IDPKFEKEFLSRIVARTNENIGGALEYFLSTGNLVSPTGLDLQQPSGYTVMAEKINFYRF 507
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C
Sbjct: 508 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKC------- 560
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVL-----LDGCIVGCIPSG 401
KI+ S LD+ SG+ Q++ L + V +DG I+G
Sbjct: 561 ---------KIETSNLDV---SGVPQIISNLGVTSESSVSLEESVVVQMDGRILGYCSPK 608
Query: 402 EVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILS 461
+ I +R KV + +P +LE+GYVP S G YPG+YLF+ +R VRPV+ + +
Sbjct: 609 QARIISDTLRYWKVEGNKSLPVELEIGYVPNSNRGQYPGIYLFSQCARMVRPVKYLPL-- 666
Query: 462 NENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHN 520
+D +GPFEQ FMEI C P G +TH E PT +LS+VAN TP+SD N
Sbjct: 667 ---DKLDYVGPFEQPFMEIACVPSDIISG-----VSTHVEFDPTYILSIVANMTPFSDFN 718
Query: 521 QSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN 580
QSPRNMYQCQM KQ M +IQ+R D KLY LQT QTPIVR Y Y +D +P G N
Sbjct: 719 QSPRNMYQCQMGKQAMGTPGTSIQYRTDNKLYRLQTGQTPIVRPPLYNCYGLDNFPNGMN 778
Query: 581 AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM------ 634
A+VAVL+YTGYDM+DAMI+N+S+ +RG G IY+T+ L ++ SR ++
Sbjct: 779 AVVAVLSYTGYDMDDAMIINRSAHDRGFGWGTIYKTKVYSLDDKESRGRGKAKREIAKLF 838
Query: 635 -FRKSNIEKSK----LDSDGLPHVG------------QMIRPDEPYCSIYNASTSSTHTL 677
F + K + LD DGLPH+G +R D S N TH L
Sbjct: 839 GFAPGGLIKGEWRQTLDEDGLPHIGVRVTEGSIVAAWHTVRFDAVSNSYINID-RQTHFL 897
Query: 678 KKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPD 735
K K +E Y+D V + Q ++I++R PR PVIGDKFSSRHGQKGVCSQLWP
Sbjct: 898 KYKDTEEGYIDSVRILGSETGGDPCQAISIKYRIPRKPVIGDKFSSRHGQKGVCSQLWPA 957
Query: 736 VDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDN 795
+DMPF +G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR S +
Sbjct: 958 IDMPFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDSTPFRFSEEHTA 1016
Query: 796 GESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDK 855
G D G+ LR+ G+N+HG E +YSG+ G+E +I++G VYYQRLRHMV+DK
Sbjct: 1017 G---------DFFGEQLRKAGYNFHGNEPMYSGITGREFAADIYLGVVYYQRLRHMVNDK 1067
Query: 856 FQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADV 915
FQVR+TG V+ +T QP GEMERD+LLAHGAA+LL DRL CSD + +
Sbjct: 1068 FQVRTTGPVNALTGQPVKGRAKGGGIRVGEMERDALLAHGAAFLLQDRLMNCSDITRSWI 1127
Query: 916 CSLCGSMLATS-----FIQPQKLP------RREIGGLPPRKAPKK-------VICHACQT 957
C CGS L+T ++ P K P + G + P A V C C
Sbjct: 1128 CRTCGSFLSTQVAVSKYVAPSKNPAMAAAAKSSSGLVKPGGAVSALGGTSGIVRCRRCAR 1187
Query: 958 SKGME----------------------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ VA+P V +YL E AAM +KMT K+NN
Sbjct: 1188 EAVFDDPRAEVWEDGEGRRFVGGDDTTVVAVPGVLKYLDVELAAMGVKMTFKVNN 1242
>Q6CW73_KLULA (tr|Q6CW73) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0B06303g PE=3 SV=1
Length = 1203
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1026 (42%), Positives = 608/1026 (59%), Gaps = 86/1026 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIE--EVRQLSLFTRL 118
++L+AL DT+D EI ++ G + DR +++ + R +L R
Sbjct: 275 MILRALCDTNDREIFDHVVG----------GDTSNSFLTDRLELLLRGFKKRYPTLQNRK 324
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-DDNFDKFNLLIFMLQKLFSLV 177
Q L Y+G+ F+ + + + V + +L V VHL ++N DKFN+L+FM++KL+SLV
Sbjct: 325 QTLQYLGDKFRVVFQASPDMTDLQVGQELLNRIVLVHLGENNKDKFNMLLFMIRKLYSLV 384
Query: 178 DGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFSEIFV 234
G DNPD+ Q+QE+LL G L + +KEK+E++LQ+ + +++ + +F +
Sbjct: 385 AGECSPDNPDAAQHQEILLGGFLYGMIVKEKIEEYLQNIRLQIQTDINRGLAINFKDQKY 444
Query: 235 VKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVH 294
+ K + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR VH
Sbjct: 445 MNKVLMRV-NENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVH 503
Query: 295 RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDY 354
RG+ FA L+TTTVRKLLPESWGF CPVHTPDG PCGLLNH++ C+I++ Q +
Sbjct: 504 RGSFFAQLKTTTVRKLLPESWGFFCPVHTPDGSPCGLLNHLSHKCKIST---EQSDVS-- 558
Query: 355 FKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH-IREL 413
I IL G+T ++ P + V LDG I+G S E K+VA +R
Sbjct: 559 -----KIPSILYSLGVTPAAH--VIAAGPSMCCVQLDGKIIGWC-SHEQGKVVADTLRFW 610
Query: 414 KVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGP 472
KV + +P DLEVGYVP + G YPGL+LF SR +RPVR + L E D++GP
Sbjct: 611 KVEGKTPGLPVDLEVGYVPPTTSGQYPGLFLFGGHSRMMRPVRYLP-LDKE----DIVGP 665
Query: 473 FEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQM 531
FEQV+M I P+ + S H E PT +LS++AN TP+SD NQSPRNMYQCQM
Sbjct: 666 FEQVYMNIAVTPEEIENNVHS-----HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQM 720
Query: 532 AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGY 591
KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P GTNA+VAV++YTGY
Sbjct: 721 GKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGY 780
Query: 592 DMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----SKLD 646
DM+DAMI+NKS+ ERG +G +Y+ E V+L+ SR DP ++ F E KLD
Sbjct: 781 DMDDAMIINKSADERGFGYGTMYKVEKVNLSMNRSRGDPITQHFGFGTDEWPKEWLEKLD 840
Query: 647 SDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDLQKV 703
DGLP +G + +P C+ ++ + + T SEP Y++ V + D +K ++LQ +
Sbjct: 841 DDGLPLIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVKLIGDESSKFQELQAI 900
Query: 704 NIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTI 763
I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSRMTI
Sbjct: 901 TIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDVIINPHAFPSRMTI 959
Query: 764 AMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLE 823
M +ES+A K G+LHG ++TP+ +S D G L + G+NYHG E
Sbjct: 960 GMFVESLAGKAGALHGIAQDSTPW---------TFNESDTPADYFGDQLAKAGYNYHGNE 1010
Query: 824 VLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXF 883
+YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1011 PMYSGATGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGGIRV 1070
Query: 884 GEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATS----------------- 926
GEMERD+L+ HG ++LL DRL CSDY VC CG++L T
Sbjct: 1071 GEMERDALIGHGTSFLLQDRLLNCSDYTQTAVCRDCGAILTTQSSVPKIGSISTVRCRRC 1130
Query: 927 ---FIQPQKLPRREIGGLPPRKAPKKVICHACQTSK-----GMETVAMPYVFRYLAAEFA 978
F + ++L + G P I Q +K TVA+P+V +YL +E A
Sbjct: 1131 ALKFDEAKRLITKYESGSEPVHIADSEIWEDGQGNKFVGGGNTTTVAIPFVLKYLDSELA 1190
Query: 979 AMNIKM 984
AM I++
Sbjct: 1191 AMGIRL 1196
>L5KV61_PTEAL (tr|L5KV61) DNA-directed RNA polymerase OS=Pteropus alecto
GN=PAL_GLEAN10005650 PE=3 SV=1
Length = 1105
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1000 (43%), Positives = 574/1000 (57%), Gaps = 98/1000 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R + R GYT V + CVR + S+ + L+YL N + L F + + LP+G
Sbjct: 191 IAMIRPKWKARGPGYTQYGVSMHCVRGEHSATNMNLHYLENGTVMLNFIYRKELFFLPLG 250
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LK L R++++E T+ Q
Sbjct: 251 FALKML------------------------------------RVVMDE----GCSTQKQV 270
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+GE F+ L+ + A+ + + +HL N +KF +L FM +KLF+L G
Sbjct: 271 LGYLGERFRVKLSLPDWYPSEQAAEFLFNQCICIHLKSNTEKFYVLCFMTRKLFALARGE 330
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ +NPDSL NQEVL PG L ++LKEK+E WL S K + +K+ + S + K F
Sbjct: 331 CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKLAIDKKAQKTNVSLNTESLMKVF 390
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ ++ E +L TG L + TGL Q +G V AD+LN++R+LSHFR VHRGA F
Sbjct: 391 NL--GTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADF 448
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NH+T C + + F SI
Sbjct: 449 AKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPA------ 502
Query: 360 SILDILVDSGMTQL--VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+L G+T + P L E VLLDG +VG + + A +R KV
Sbjct: 503 ----LLCSLGVTPVDGAPHRLYT---ECYPVLLDGIMVGWVDKDLAPSVAASLRRFKVLR 555
Query: 418 SAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
IP +EV +P++ + YPGL+LFT+P R VRPV+N+ + E L+G EQV
Sbjct: 556 EKRIPPWMEVVLIPMTGKPSLYPGLFLFTNPCRLVRPVQNVELGHEE-----LVGTMEQV 610
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
F+ I + TH+E+ P +LSV+AN P+SDHNQSPRNMYQCQM KQTM
Sbjct: 611 FLNIAVFEA----EVVVGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTM 666
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
F T + R+D KLY LQTPQ+P+VR Y Y++D YP GTNAIVAV++YTGYDMEDA
Sbjct: 667 GFPLLTYRDRSDNKLYRLQTPQSPLVRPRMYDHYDMDNYPIGTNAIVAVISYTGYDMEDA 726
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS--KLDSDGLPHVG 654
M++NK+S ERG HG +Y++E +DLTE+ + D S K ++ KLDSDGLP VG
Sbjct: 727 MVVNKASWERGFAHGSVYKSEFIDLTEKVKQGDDSLVFGVKPGDPRTAQKLDSDGLPFVG 786
Query: 655 QMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV---DVKNKKDLQKVNIRFRHPR 711
+R +PY S + + + E VD + V D K + V I R PR
Sbjct: 787 AWLRYGDPYFSYVSLHSGDGAVVLYTSKESCIVDNIKVCSNDAGTGK-FKCVCITVRVPR 845
Query: 712 NPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVA 771
NP IGDKF+SRHGQKG+ S+LWP DMPF +GM PD++ NPH FPSRMTI ML+ES+A
Sbjct: 846 NPTIGDKFASRHGQKGILSRLWPAEDMPFT-ESGMVPDILFNPHGFPSRMTIGMLIESMA 904
Query: 772 AKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYG 831
K +LHG +ATPF S E S L G ML+ G+ ++G E LYSG+ G
Sbjct: 905 GKSAALHGLCQDATPFTFS-------EENSA--LGHFGDMLKAAGYAFYGTERLYSGISG 955
Query: 832 KELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSL 891
EL +IFIG VYYQRLRHMVSDKFQVR+TG D+ T QP FGEMERD+L
Sbjct: 956 LELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRATNQPVGGRNVQGGIRFGEMERDAL 1015
Query: 892 LAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP---K 948
LAHG ++LLHDRL CSD +A VC CGS+L+ +P PP + +
Sbjct: 1016 LAHGTSFLLHDRLFNCSDRSVAHVCVRCGSLLSPLLEKP-----------PPAWSAMRNR 1064
Query: 949 KVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
K C CQ S ++TV++PYVFRY AE AAMNIK+ L +
Sbjct: 1065 KYSCTVCQRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV 1104
>J4VYK0_BEAB2 (tr|J4VYK0) DNA-directed RNA polymerase OS=Beauveria bassiana (strain
ARSEF 2860) GN=BBA_07586 PE=3 SV=1
Length = 1229
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1056 (41%), Positives = 606/1056 (57%), Gaps = 119/1056 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R GY+ ++IR VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 MAINRPSFQNRGPGYSPYGIIIRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVI 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
+++KAL++T+D EI L K A G + DR +++ + L+++ +
Sbjct: 266 MIMKALVETNDREIFEGLIGPMGSK------ATGNTFLTDRVELLLRTYKSYGLYSKSET 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+G+ F+ +L + S V L+ VHL + + DKF +L+FM++KL
Sbjct: 320 RAYLGQKFRVVLGVPETMSDYDVGTEFLRRIALVHLGNVKVTEKQDDDKFKMLLFMVRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFD 228
++LV G +DNPD++QNQE+LL G L LKE+L+++L G ++ +R
Sbjct: 380 YALVAGECAVDNPDAIQNQEILLGGFLYGQILKERLDEFLGVGVRLSLREYFRRHPSVTF 439
Query: 229 FSEIFVVKKCFDKTPARA----ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
SE F +K F R + TSIE L TG LV+ +GLDLQQ AG+TV A++LN+L
Sbjct: 440 HSEEF--RKEFPTAIFRKANENLGTSIEYFLSTGNLVSPSGLDLQQVAGFTVVAEKLNFL 497
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TS 343
RF++HFR VHRGA FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I T
Sbjct: 498 RFIAHFRMVHRGAFFAQLKTTTVRKLLPESWGFMCPVHTPDGAPCGLLNHLAHKCKIMTD 557
Query: 344 YFDSQGSIKDYFKIKISILDI-LVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGE 402
+ D K+ + ++ VD+ E + ++LDG ++G E
Sbjct: 558 HIDVS-------KVPGLVAELGAVDTSTASTA---------ESVVIMLDGKVLGWCKPKE 601
Query: 403 VEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSN 462
++ +R KV + +P LE+GYVP S GG+YPG+Y+ ++PSR +RPV+ + +
Sbjct: 602 SLRMADCLRHWKVEGNRGVPLHLEIGYVPPSTGGSYPGIYMTSTPSRMIRPVKYLPL--- 658
Query: 463 ENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQ 521
+ D++GP+EQ +M I P+ + G +TH E PT +LS++AN TP+SD NQ
Sbjct: 659 --QKEDMVGPYEQPYMSIAVVPEEIESGL-----STHVEFDPTNILSILANMTPFSDFNQ 711
Query: 522 SPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA 581
SPRNMYQCQM KQTM + HR D K Y LQT QTPIVR + Y D +P GTN
Sbjct: 712 SPRNMYQCQMGKQTMGTPGTALVHRTDNKSYRLQTGQTPIVRAPLHNAYGFDNFPNGTNV 771
Query: 582 IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK---- 637
IVAV++YTGYDM+DAMI+NKS+ ERG HG +Y+T+ + L + SR+ S + +
Sbjct: 772 IVAVISYTGYDMDDAMIINKSAHERGFGHGTVYKTKKISLKDD-SRTRASKSVTKAFGFA 830
Query: 638 -----SNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKKKGS 682
S + LD DGLPHVG++++ + C+ + + TH K K
Sbjct: 831 PHSYVSASYQGMLDDDGLPHVGRLVQEGDVICAWHTVTPDYRGDLVNLDGITHYEKYKDG 890
Query: 683 EPVYVDYVAVDVKNKKD--LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
E +V+ V + + LQ ++I+FR PR P+IGDKFSSRHGQKGVCSQ WP +DMPF
Sbjct: 891 ETGFVEEVRLIGADSGSELLQTISIKFRIPRAPLIGDKFSSRHGQKGVCSQKWPAIDMPF 950
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ S + G
Sbjct: 951 S-ESGMQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFSEQHTAG---- 1005
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
D G L + G+NYHG E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQVR+
Sbjct: 1006 -----DYFGHQLMKAGYNYHGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKFQVRT 1060
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG + T QP GEMERD+LLAHG A+LL DRL CSDY + +C CG
Sbjct: 1061 TGPIVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKSWICRRCG 1120
Query: 921 SMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTS---------------------- 958
S L+ Q P R +KAP V C C
Sbjct: 1121 SFLSVQPTVSQFAPSR-------KKAPSVVRCRHCAVRLDDDGIDLTEIQGEIWEDGQGR 1173
Query: 959 ---KGMET--VAMPYVFRYLAAEFAAMNIKMTLKLN 989
G +T V +P +YL E AAM +K+ ++N
Sbjct: 1174 SWVGGDQTTQVVVPGALKYLDVELAAMGVKLKYRIN 1209
>G0VD52_NAUCC (tr|G0VD52) DNA-directed RNA polymerase OS=Naumovozyma castellii
(strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)
GN=NCAS0C04240 PE=3 SV=1
Length = 1201
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1042 (42%), Positives = 606/1042 (58%), Gaps = 118/1042 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R YT + +R VR DQ+S T L+YL + F + EYL+PV
Sbjct: 213 MAIIRPSFTNRGAAYTQFGIQLRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 272
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL DTSD EI G +G+ D DR +++ + R +L
Sbjct: 273 MILKALCDTSDREIF--------------DGIIGSDLHDSFLTDRLELLLRGFKKRYPTL 318
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD--DNFDKFNLLIFMLQK 172
R Q L ++G+ F+ + + S V + VL V VHL +N DKF +L+FM++K
Sbjct: 319 QNRTQVLQFLGDKFRVVFQASPDKSDYEVGQEVLDRIVLVHLGKGNNEDKFRMLLFMIRK 378
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEI 232
L+SLV G DNPD+ Q+QEVLL G L + +KEK++++LQ+ +++ S +
Sbjct: 379 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNIIQQIRTDSNR-GLAIN 437
Query: 233 FVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
F +K + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 438 FKDRKYMSRVLMRVNENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 497
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C+I++
Sbjct: 498 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCKISTQQSDVS 557
Query: 350 SIKDY-FKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
I +++ +S + +G P V +DG I+G + S E KI+A
Sbjct: 558 QIPGLLYQLGVSPASHTIAAG-------------PSQCCVQIDGKIIGWV-SHEQGKIIA 603
Query: 409 H-IRELKVSSS-AMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
+R KV +P DLE+GYVP S G YPGLY+F SR +RPVR + L E
Sbjct: 604 DTLRFWKVEGKIPGLPLDLEIGYVPPSTRGQYPGLYIFGGHSRMMRPVRYLP-LDKE--- 659
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNM 526
D++GPFEQV+M + + TH E PT +LS++AN TP+SD NQSPRNM
Sbjct: 660 -DIVGPFEQVYMNVAVTPQ----EIENNVHTHVEFTPTNILSILANLTPFSDFNQSPRNM 714
Query: 527 YQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL 586
YQCQM KQTM + HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV+
Sbjct: 715 YQCQMGKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVI 774
Query: 587 AYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---- 642
+YTGYDM+DAMI+NKS+ ERG +G +Y+ E VDL+ SR DP ++ F N E
Sbjct: 775 SYTGYDMDDAMIINKSADERGFGYGTMYKVEKVDLSLNRSRGDPITQHFGFGNDEWPKEW 834
Query: 643 -SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-K 698
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK +
Sbjct: 835 LDKLDDDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQ 894
Query: 699 DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
+LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP VDMPF TG++PD+IINPHAFP
Sbjct: 895 ELQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTVDMPFS-ETGIQPDVIINPHAFP 953
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI M +ES+A K G+LHG +ATP+ +D+ + D G L + G+N
Sbjct: 954 SRMTIGMFVESLAGKSGALHGVAQDATPW--IFNEDDTPA-------DYFGDQLVKAGYN 1004
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
YHG E +YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1005 YHGNEPMYSGATGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRH 1064
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
GEMERD+L+ HG ++LL DRL CSDY VC CGS+L T Q +PR I
Sbjct: 1065 GGIRVGEMERDALIGHGTSFLLQDRLLNCSDYTQTSVCRECGSILTTQ----QSVPR--I 1118
Query: 939 GGLPPRKAPKKVICHACQT----SKGM--------------------------------E 962
G L V C C +K M
Sbjct: 1119 GSL------STVCCRRCAVRFDEAKSMLAKDEETSNVFIDDSEIWEDGQGNKFVGGNDTT 1172
Query: 963 TVAMPYVFRYLAAEFAAMNIKM 984
TVA+P+V +YL +E AM I++
Sbjct: 1173 TVAIPFVLKYLDSELTAMGIRL 1194
>G0WEC6_NAUDC (tr|G0WEC6) DNA-directed RNA polymerase OS=Naumovozyma dairenensis
(strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 /
NRRL Y-12639) GN=NDAI0G03600 PE=3 SV=2
Length = 1204
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1041 (42%), Positives = 608/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + +R VR DQ+S T L+YL + F + EYL+PV
Sbjct: 216 MAIIRPSFANRGASYSQYGIQLRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL DTSD EI G +G+ D DR +++ + R +L
Sbjct: 276 MILKALCDTSDREIF--------------DGIIGSDLKDSFLTDRLELLLRGFKKRYPTL 321
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD--DNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + S V + ++ V VHL +N DKFN+L+FM++K
Sbjct: 322 QNRTQVLQYLGDKFRVAFQASPDKSDYEVGQELIDRIVLVHLGKGNNQDKFNMLLFMIRK 381
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEI 232
L+SLV G DNPD+ Q+QEVLL G L + +KEK++++LQ+ +++ S +
Sbjct: 382 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNIVAQIRTDSNR-GLAIN 440
Query: 233 FVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
F +K + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 FKDRKYMARVLMRVNDNIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 500
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C+I++
Sbjct: 501 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCKISTQ----- 555
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ +S + L+ S V + GP + V +DG I+G + S E KI+A
Sbjct: 556 ------QSDVSQVPALLYSLGVSPVSHIFAAGP-SLCCVQIDGKIIGWV-SHEQGKIIAD 607
Query: 410 -IRELKVSSSA-MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV +P DLE+GYVP S G YPGLY+F SR +RPV+ + L E
Sbjct: 608 TLRFWKVEGKVPGLPLDLEIGYVPPSNSGQYPGLYIFGGHSRMMRPVKYLP-LDKE---- 662
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 663 DIVGPFEQVYMNIAVTPQ----EIENNTHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 718
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV++
Sbjct: 719 QCQMGKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVIS 778
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+ E VDL+ SR DP ++ F N E
Sbjct: 779 YTGYDMDDAMIINKSADERGFGYGTMYKVEKVDLSLNRSRGDPITQHFGFGNDEWPKEWL 838
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 839 DKLDDDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 898
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 899 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDVIINPHAFPS 957
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG +ATP+ + +N D G L + G+NY
Sbjct: 958 RMTIGMFVESLAGKSGALHGVAHDATPW---IFNENDTPA------DYFGDQLLKAGYNY 1008
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1009 HGNEPMYSGATGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1068
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL CSDY VC CGS+L T Q +PR IG
Sbjct: 1069 GIRVGEMERDALIGHGTSFLLQDRLLNCSDYTQTSVCRECGSILTTQ----QSVPR--IG 1122
Query: 940 GLPPRKAPKKVICHAC----------------------------QTSKGME--------T 963
L V C C + +G + T
Sbjct: 1123 SL------STVCCRRCAIKFDKAKALLASQDGDANVFIDDSQIWEDGQGNKFVGGNDTTT 1176
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E AM I++
Sbjct: 1177 VAIPFVLKYLDSELTAMGIRL 1197
>F0ZVX5_DICPU (tr|F0ZVX5) DNA-directed RNA polymerase OS=Dictyostelium purpureum
GN=DICPUDRAFT_156179 PE=3 SV=1
Length = 1117
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/1007 (42%), Positives = 588/1007 (58%), Gaps = 77/1007 (7%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R +++ R GYT + IRCVR D++S+T L+Y+ + L F + +E+ LP ++LK
Sbjct: 166 RKAWTNRGPGYTKFGITIRCVRPDRTSITNNLHYISDGQITLRFLYRRQEFFLPATLLLK 225
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL DT++ EI NL NE + DR + + E + ++ T+ + L+YI
Sbjct: 226 ALKDTTEREIYENLVQGDNE----------NTFLTDRVELSLREQKINNINTQEEVLDYI 275
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGTSVLD 184
G F+ + S + + + YVFVHL + DK+NLL+ M+QKL+S+V G S D
Sbjct: 276 GSRFRARSQLPSSFSNTQIGQWFIDSYVFVHLPNYKDKYNLLVLMIQKLYSMVAGKSGTD 335
Query: 185 NPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD------EMKRKSGTFDFSEIFVVKKC 238
N DS EVLL G + L EKL ++L+S + E K+K ++
Sbjct: 336 NIDSAAFHEVLLAGQIFGSILGEKLTEYLESTRSFTLKHFEDKKKEND-------KLENV 388
Query: 239 FDKTPAR--AISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
F KT + I L TG L +N+GLDLQQ +G+ V AD+LN+LRF+SHFR++HRG
Sbjct: 389 FKKTVEKNFKIGDRFNYFLATGNLRSNSGLDLQQTSGFVVIADKLNFLRFISHFRSIHRG 448
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA ++TT++RKL+PESWGFLCPVHTPDG PCGLLNH+T C +T D K K
Sbjct: 449 AFFATMKTTSIRKLMPESWGFLCPVHTPDGAPCGLLNHLTSACLVT--VDPLQDQK-VLK 505
Query: 357 IKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELK-V 415
+ I L GM + + + LT+ LDGC++G I E++V +R L+ V
Sbjct: 506 ARPLIPSFLATHGMLPIDMTTVFSH--QYLTITLDGCVIGKIEQKAGEELVTMLRYLRSV 563
Query: 416 SSSAMIPDDLEVGYVPLSM--GGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPF 473
+ IP +E+ Y P S YPG+ LFTS +RF+RPV N++ E LIGP
Sbjct: 564 GTEPAIPKTIEISYSPPSSVENSQYPGISLFTSGARFMRPVINLTSGKEE-----LIGPQ 618
Query: 474 EQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
EQ++MEI P+ G TH E PT M S++AN TP+SD+NQSPRNMYQCQMA
Sbjct: 619 EQLYMEIAVVPNEVIKG-----VTTHIETSPTAMFSLLANLTPFSDYNQSPRNMYQCQMA 673
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + R D KLY +Q Q PIV T KY +++Y G NA++AV++ TGYD
Sbjct: 674 KQTMGTPLHSYPFRTDNKLYKIQNIQKPIVHTKNQFKYRVNDYAHGCNAVIAVISNTGYD 733
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSKL----DSD 648
MEDAMI+NKS+ ERG HG +Y+ E +DL E SR + F + N L D D
Sbjct: 734 MEDAMIINKSAYERGFGHGSVYKNEYIDLDEGLSRFESKKTFFGRPNSSVDNLGDFIDVD 793
Query: 649 GLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKN---KKDLQKVN- 704
GLP VG++I+P EPY + S KG E Y++ V + + ++ K+N
Sbjct: 794 GLPFVGRLIKPGEPYYTYIRPSDGKQVVKDYKGKEEAYIEEVRILFASGGTGREPSKINN 853
Query: 705 --IRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
++ R+ RNPVIGDKFSSRHGQKGV SQLWP+V+MPF +GM+PD+IINP+AFPSRMT
Sbjct: 854 ICVKLRYNRNPVIGDKFSSRHGQKGVLSQLWPEVNMPFT-ESGMKPDVIINPNAFPSRMT 912
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGL 822
I ML+E +A K G++HG+F +AT F + ++ +D G+ L + GFN G
Sbjct: 913 IGMLVEILAGKAGAIHGKFQDATAF---------QFDEKNTAIDFFGEQLSKSGFNRFGN 963
Query: 823 EVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXX 882
E +YSG GKE EIF G YYQRLRHMV DK+QVR+ G V+ +TRQP
Sbjct: 964 ETMYSGTTGKEFEAEIFFGVCYYQRLRHMVKDKYQVRALGKVNALTRQPIKGRKVGGGIR 1023
Query: 883 FGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLP 942
FGEMERDSLLAHGA++ L+DRL SD+ VC LCGS L + + + +
Sbjct: 1024 FGEMERDSLLAHGASFCLNDRLMKSSDFAKIKVCKLCGSTL--TIYSKKDYSNQTVSE-- 1079
Query: 943 PRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
C AC+++ + V++PYVF YL AE AA+NI M L +N
Sbjct: 1080 ---------CKACKSTDSISIVSIPYVFTYLVAELAAVNITMKLTVN 1117
>B6QA38_PENMQ (tr|B6QA38) DNA-directed RNA polymerase OS=Penicillium marneffei
(strain ATCC 18224 / CBS 334.59 / QM 7333) GN=PMAA_072800
PE=3 SV=1
Length = 1261
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/961 (42%), Positives = 577/961 (60%), Gaps = 75/961 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF +R G+T V IR R DQ++ T L+YL + + F + +EYL+PV
Sbjct: 223 MAINRPSFQKRGVGFTTFGVQIRSARPDQTTQTNVLHYLSDGNVTFRFSWRKQEYLVPVM 282
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI + KG+ T V DR +++ +++R
Sbjct: 283 MILKALVETNDREIFEGIVGN-----ASSKGSANT-FVTDRVELLLRTFHGYKIWSRSDA 336
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+G+ F+P+L +++ L+ V HL + ++DKF L++FM++KL
Sbjct: 337 RAYLGKKFRPVLFAPATWTHEECGTEFLRKIVLPHLGNQNVTTTQDYDKFKLILFMIRKL 396
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS-GK--DEMKRKSGTFDFS 230
+S V G DNPD++ NQE++L G++ + LKE+LE+WL S G+ + K G F+
Sbjct: 397 YSFVAGDCASDNPDAVSNQEIMLGGYVYGMLLKERLEEWLLSFGRLLRDWSYKGGNLKFT 456
Query: 231 EIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFL 287
+ K K R + ++E L TG LV+ TGLD+QQ +G+TV A+++N+ RF+
Sbjct: 457 DPMFEKDFISKVIKRTNENLGGALEYFLSTGNLVSPTGLDMQQASGFTVVAEKINFYRFI 516
Query: 288 SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDS 347
SHFR VHRG FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH+ C +++
Sbjct: 517 SHFRMVHRGTFFAQLKTTTVRKLLPESWGFMCPVHTPDGSPCGLLNHLAHKCLVST---- 572
Query: 348 QGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIV 407
S D I + + + + + V E + V L+G ++G + + I
Sbjct: 573 --SDLDVAHIPRVLAQLGIKTESSAEVT--------ESVCVQLNGRVIGYCSPKQAKMIH 622
Query: 408 AHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + IP +LE+GY+P GG YPG+Y+ + P+R RPV+ +++ +
Sbjct: 623 DTLRFWKVEGTHGIPKELEIGYIPNMQGGQYPGIYMSSQPARMYRPVKYLAL-----DKL 677
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D +GPFEQ FMEI C + S +TH E PT M S++AN TP+SD+NQSPRNMY
Sbjct: 678 DYVGPFEQPFMEIACLEED----IRSGLSTHIEFTPTNMFSIIANMTPFSDNNQSPRNMY 733
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM+KQTM +I R D K+Y LQT QTPIVR+ Y +Y +D +P G NAIVA+L+
Sbjct: 734 QCQMSKQTMGTPGTSIAFRTDNKMYRLQTGQTPIVRSPLYNEYGLDNFPNGCNAIVAILS 793
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK-------SNI 640
Y+ YDM+DAMI+NKSS ERG HG +Y+T+ +L ++ SR + S R K + I
Sbjct: 794 YSAYDMDDAMIINKSSHERGFGHGTVYKTKFYNLDDKDSRRNKSKREISKLFGFAPGAEI 853
Query: 641 E---KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS-----------THTLKKKGSEPVY 686
+ ++ LD DGLPH G ++ + YN + TH LK K +E Y
Sbjct: 854 KAEWRTTLDEDGLPHPGVKVKEGSYVAAWYNVRYDAGSDSYVNVDGQTHFLKYKDAEEGY 913
Query: 687 VDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTT 744
+D V + + + LQ +++++R PR P+IGDKFSSRHGQKGVCSQLWP +DMPF +
Sbjct: 914 IDTVRLVGNENGNEPLQAISVKYRVPRKPIIGDKFSSRHGQKGVCSQLWPAIDMPFS-ES 972
Query: 745 GMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLL 804
G+ PDLIINPHAFPSRMTIA ++ES+A K G+LHG V+ TPF + +
Sbjct: 973 GIMPDLIINPHAFPSRMTIAQIIESMAGKAGALHGHPVDCTPF---------QFNEENTA 1023
Query: 805 LDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTV 864
D G LR+ G+NYHG E +YSG+ GKE +I++G V+YQRLRHMV+DKFQVR+TG V
Sbjct: 1024 ADYFGHQLRKAGYNYHGNEPMYSGITGKEFAADIYLGVVHYQRLRHMVNDKFQVRTTGPV 1083
Query: 865 DQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLA 924
+ VT QP GEMERDSLLAHG A+LL DRL CSD A +C CGS L+
Sbjct: 1084 NSVTGQPVKGRSKGGGIRVGEMERDSLLAHGCAFLLQDRLMNCSDSTRAWICRDCGSFLS 1143
Query: 925 T 925
T
Sbjct: 1144 T 1144
>N4V4F2_COLOR (tr|N4V4F2) DNA-directed RNA polymerase i subunit beta
OS=Colletotrichum orbiculare (strain 104-T / ATCC 96160 /
CBS 514.97 / LARS 414 / MAFF 240422) GN=Cob_01512 PE=4
SV=1
Length = 1225
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1058 (41%), Positives = 606/1058 (57%), Gaps = 121/1058 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R GYT +++R VR D++S T L+YL + + F K EYL+PV
Sbjct: 205 MAINRPSFQNRGHGYTPYGIILRSVRPDETSQTNVLHYLSDGNMTFRFSWKKNEYLVPVM 264
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L K K + DR +++ + LFT+ +
Sbjct: 265 MILKALVETNDREIFEGLIGLSQSKSAK------NTFLTDRVELLLRTYKSYGLFTKTET 318
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+ +L S V L+ V VHL ++ DKF +L+FM++KL
Sbjct: 319 RAYLGEKFRVVLGVPDTMSNYDVGTEFLRKIVLVHLGNVDVTEKEDIDKFRMLLFMIRKL 378
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIF 233
++LV G +DNPD++QNQEVLL G L + +KE+LE++L + R+ + F
Sbjct: 379 YALVAGDCAVDNPDAIQNQEVLLGGFLYGMIIKERLEEFLTTAVRLSLREWCRKHPATPF 438
Query: 234 VVKKCFDKTPARAISTSIENM-------LKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
+ PA + EN+ L TG L + +GLDLQQ AG+TV A++LN+LRF
Sbjct: 439 TSQDFIKDFPANIFRQANENLGNGLEYFLSTGNLTSPSGLDLQQTAGFTVVAEKLNFLRF 498
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRGA FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I +
Sbjct: 499 ISHFRMIHRGAFFAELKTTTVRKLLPESWGFMCPVHTPDGAPCGLLNHLAHKCKIMT--- 555
Query: 347 SQGSIKDYFKIKISILD---ILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVG-CIPSGE 402
D KI + + + V S T E + V+LDG I+G C P
Sbjct: 556 ---ESVDASKIPALVSELGAVEVSSAATD-----------ESVVVMLDGRIIGFCTPRES 601
Query: 403 VEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSN 462
V +I +R KV + +P LE+GYVP S GG+YPGLYL ++P+R +RPV+ + +
Sbjct: 602 V-RIADTLRYWKVEGTHGVPLQLEIGYVPPSNGGSYPGLYLASAPARMIRPVKYLPL--- 657
Query: 463 ENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
D +GP EQ +M I + S +TH EI PT MLS++AN TP+SD NQS
Sbjct: 658 --DKEDFVGPHEQPYMSIAVVEK----EIVSGESTHVEITPTNMLSILANMTPFSDFNQS 711
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQM KQTM ++++R D K+Y LQ+ QTP+VR+ + Y D +P GTNA+
Sbjct: 712 PRNMYQCQMGKQTMGTPGASLRYRTDNKMYRLQSGQTPVVRSPLHNAYGFDNFPNGTNAV 771
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK 642
VAV++YTGYDM+DAMILNKS+ ERG HG IY+T+ V L ++ SR NI+K
Sbjct: 772 VAVISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKVSLKDE-------SRTRAAKNIQK 824
Query: 643 ---------------SKLDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTL 677
++LD DGLP+VG+M++ + C+ + S TH
Sbjct: 825 LFGFAPGGFVKGHYRAQLDEDGLPYVGRMVQEGDVLCAWHTVSADYSGKFINLDGQTHYE 884
Query: 678 KKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPD 735
K K SE +++ V V + Q ++I+ R PR+PVIGDKFSSRHGQKGV SQ WP
Sbjct: 885 KYKDSETAFIEEVRVIGSETGNEPSQTISIKLRIPRSPVIGDKFSSRHGQKGVASQKWPA 944
Query: 736 VDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDN 795
+DMPF +G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF K N
Sbjct: 945 IDMPFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPF-----KFN 998
Query: 796 GESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDK 855
E+ + D G L + G+NYHG E +YSG+ G+EL +I++G VYYQRLRHMV+DK
Sbjct: 999 EENTAA----DYFGHQLMKAGYNYHGNEPMYSGITGEELAADIYVGVVYYQRLRHMVNDK 1054
Query: 856 FQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADV 915
+QVR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY +
Sbjct: 1055 YQVRTTGPVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKTWI 1114
Query: 916 CSLCGSMLATSFIQPQKLP----RREIGGLPPRKAPKKVICHACQTSKGME--------- 962
C CGS L+ +QP P +R+I + R ++ ++ +E
Sbjct: 1115 CRSCGSFLS---VQPTVSPFVGKKRQITMVRCRNCATQLDAGDAASAAKVEGEIWEDGQG 1171
Query: 963 ----------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
V +P +YL E AAM +K+ ++++
Sbjct: 1172 NQWVGGDNTTMVVVPGALKYLDVELAAMGVKLKYRVHS 1209
>J7RY09_KAZNA (tr|J7RY09) DNA-directed RNA polymerase OS=Kazachstania naganishii
(strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969
/ KCTC 17520 / NBRC 10181 / NCYC 3082) GN=KNAG0D02320
PE=3 SV=1
Length = 1202
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1040 (42%), Positives = 602/1040 (57%), Gaps = 114/1040 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+P
Sbjct: 214 MAIIRPSFTNRGASYSAFGIQIRAVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPAV 273
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL DTSD EI G VG+ + DR +++ + R +L
Sbjct: 274 MILKALCDTSDREIF--------------DGIVGSDLSNSFLTDRLELLLRGFKKRYPTL 319
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD--NFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + + V + VL V VHL + N DK LL+FM++K
Sbjct: 320 QNRTQVLQYLGDKFRFVFQASADKTDYEVGQEVLNRIVLVHLGNGNNEDKSKLLLFMIRK 379
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + +KEK++++LQ+ +++ + +F
Sbjct: 380 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNIISQIRADINRGMAINF 439
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 440 KDRKYMSRVLMRV-NENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 498
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C I++
Sbjct: 499 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCSIST------ 552
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ D K+ + + V S P + V LDG I+G + + I
Sbjct: 553 TQSDVTKVPSLLYSLGVSSASHTFA------AGPSLCCVQLDGRIIGWTSHAQGKIIADT 606
Query: 410 IRELKVSSSA-MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R LKV +P DLE+GYVP S G YPGLYLF SR +RPVR + L E D
Sbjct: 607 LRFLKVEGKTDGLPLDLEIGYVPPSTKGQYPGLYLFAGHSRMMRPVRYLP-LDKE----D 661
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
++GPFEQV+M I + +H E PT +LS++AN TP+SD NQSPRNMYQ
Sbjct: 662 IVGPFEQVYMNIAVTQQ----EIQNNIHSHVEFTPTNILSILANLTPFSDFNQSPRNMYQ 717
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM + HR+D KLY LQ+ QTPIV+ + Y Y +D +P GTNA+VAV++Y
Sbjct: 718 CQMGKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDDYGMDNFPNGTNAVVAVISY 777
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----S 643
TGYDM+DAMI+NKS+ ERG +G +Y+ E +DL+ +R DP S+ F + + +
Sbjct: 778 TGYDMDDAMIINKSADERGFGYGTMYKVEKIDLSLNRNRGDPVSQHFGFGSDDWPKEWLN 837
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDL 700
KLD DGLPH+G + +P C+ ++ + T SEP Y++ V + D NK ++L
Sbjct: 838 KLDDDGLPHIGTYVEEGDPICAYFDDVVNKTKIKTYHSSEPGYIEEVNLIGDESNKFQEL 897
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
Q V+I++R R P IGDKFSSRHGQKGVCS+ WP VDMPF TG++PD+IINPHAFPSR
Sbjct: 898 QTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTVDMPFS-ETGIQPDVIINPHAFPSR 956
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI M +ES+A K G+LHG +ATP+ +D+ + D G+ L + G+NYH
Sbjct: 957 MTIGMFVESLAGKAGALHGIAQDATPW--IFNEDDTPA-------DYFGEQLAKAGYNYH 1007
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 GNEPMYSGATGEELRVDIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGG 1067
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
GEMERD+L+ HG ++LL DRL CSDY VC CGS+L T Q +PR IG
Sbjct: 1068 IRVGEMERDALIGHGTSFLLQDRLLNCSDYTQTPVCRECGSILTTQ----QTVPR--IG- 1120
Query: 941 LPPRKAPKKVICHACQT----SKGM--------------------------------ETV 964
AP V C C +K M T+
Sbjct: 1121 -----APSTVCCRRCAVKFDDAKKMLSQYGGEETIFIDDSQIWEDGQGHKFVGGNNTTTI 1175
Query: 965 AMPYVFRYLAAEFAAMNIKM 984
A+P+V +YL +E AM IK+
Sbjct: 1176 AVPFVLKYLDSELTAMGIKL 1195
>G2Q3M7_THIHA (tr|G2Q3M7) DNA-directed RNA polymerase OS=Thielavia heterothallica
(strain ATCC 42464 / BCRC 31852 / DSM 1799)
GN=MYCTH_2295109 PE=3 SV=1
Length = 1234
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1052 (41%), Positives = 612/1052 (58%), Gaps = 111/1052 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ +R SF+ R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 LAIIRPSFANRGSSYTQYGIIVRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKALI+T+D EI L N K + + DR +++ + L+T+ Q
Sbjct: 266 MILKALIETNDREIFEGLVGPPNSK------GIENTFLTDRVELLLRTYKSYGLYTKTQT 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+G+ F+ +L S V L+ V VHL + + DKF +L+FM +KL
Sbjct: 320 RAYLGQKFRVVLGVPDTMSDYEVGTEFLRKVVLVHLGCVDVTEEQDLDKFKMLLFMCRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWL----QSGKDEMKRKSGTFDF 229
++LV G +DNPD++QNQE+LL G L + LKE+L++ L ++ + R++ T F
Sbjct: 380 YALVAGDCAVDNPDAVQNQEILLGGFLYGMILKERLDELLSVSLKAALRDYLRRNPTLSF 439
Query: 230 SEIFVVK----KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
+ K F +T + ++E L TG L + +GLDLQQ +G+TV A++LN+LR
Sbjct: 440 TSSSFAKDFPISIFRRT-NENLGNALEYFLSTGNLQSPSGLDLQQTSGFTVVAEKLNFLR 498
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
F+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C+I +
Sbjct: 499 FISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHLAHKCKIMTES 558
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
++ +++ + D S T E + V+LDG I+G +
Sbjct: 559 VDVSAVPG-VAMELGVND--YSSAATS-----------ESVVVMLDGRIIGWCTPKAAKA 604
Query: 406 IVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENK 465
+ +R KV IP LE+GYVP S GG+YPG+Y+ + PSR VRPV+ + L E
Sbjct: 605 VADTLRRWKVEGGHGIPVLLEIGYVPPSRGGSYPGIYMASQPSRMVRPVKYLP-LGKE-- 661
Query: 466 NIDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSP 523
D +GP EQ +M I C + + P +TH E PT +LS++AN TP+SD NQSP
Sbjct: 662 --DFVGPHEQPYMSIACTE------EEVIPGDSTHVEFDPTNILSILANMTPFSDFNQSP 713
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQ+M I++R D K+Y LQT QTPIVR + Y D +P G NA+V
Sbjct: 714 RNMYQCQMGKQSMGTPGAAIRYRTDNKMYRLQTGQTPIVRAPLHNTYGFDNFPNGMNAVV 773
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTE--QGSRSDPSSRMF------ 635
AV++YTGYDM+DAMILNKS+ ERG HG IY+T+ + L + + S +RMF
Sbjct: 774 AVISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKISLKDDTRTRTSKTITRMFGFAPGS 833
Query: 636 --RKSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTLKKKGSE 683
R S ++ LD DGLP+VG+++R + C+ + S TH + K +E
Sbjct: 834 PVRAS--DREMLDEDGLPYVGRLVREGDILCAWHTVSADYSGQLINRDGITHWERYKEAE 891
Query: 684 PVYVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPF 740
+++ V V D N+ LQ ++I+ R PR+PVIGDKFSSRHGQKGV SQ WP +DMPF
Sbjct: 892 DAFIEEVRVIGSDSGNEP-LQTISIKLRIPRSPVIGDKFSSRHGQKGVASQKWPAIDMPF 950
Query: 741 CGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEK 800
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF K N E
Sbjct: 951 S-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPF-----KFNEEHTA 1004
Query: 801 SGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRS 860
+ D GQ L + G+NYHG E +YSG+ G+E C+I+IG VYYQRLRHMV+DK+QVR+
Sbjct: 1005 A----DYFGQQLIKAGYNYHGNEPMYSGITGEEFACDIYIGVVYYQRLRHMVNDKYQVRT 1060
Query: 861 TGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCG 920
TG V T QP GEMERD+LLAHG A+LL DRL CSDY A +C CG
Sbjct: 1061 TGPVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKAWICRDCG 1120
Query: 921 SMLATSFIQPQKLP----RREIGGLPPRKAPK-----------KVICHACQTSKGME--- 962
S L+ +QP P RR++G + R + K+ + +G++
Sbjct: 1121 SFLS---VQPTVSPFIGKRRQVGTVRCRNCAQRLDQIEGLDLMKLDGEIWEDGQGVQWIG 1177
Query: 963 -----TVAMPYVFRYLAAEFAAMNIKMTLKLN 989
V +P ++L E AA+ +KM +++
Sbjct: 1178 GENTTMVVVPGALKFLDVELAALGVKMKFRVD 1209
>H2ASH4_KAZAF (tr|H2ASH4) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0C03320 PE=3 SV=1
Length = 1206
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1052 (42%), Positives = 601/1052 (57%), Gaps = 138/1052 (13%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 218 MAIIRPSFVNRGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPVV 277
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL D SD EI G VG+ + DR +++ + R +L
Sbjct: 278 MILKALYDISDREIF--------------DGIVGSDTANSFLTDRLELLLRGFKKRYPTL 323
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + V+ V VHL ++N DK +L+FM++K
Sbjct: 324 QNRTQILQYLGDKFRFVFQASPDKSDYEVGQEVINRIVLVHLGQNNNQDKLRMLLFMIRK 383
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEI 232
L+SLV G DNPD+ Q+QEVLL G L + +KEK++++LQ G R +
Sbjct: 384 LYSLVAGECAPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQ-GIMAQVRTDVNRGMAIN 442
Query: 233 FVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
F +K + R I + ++ L TG LV+ +GLDLQQ +GY V A+++N+ RF+SH
Sbjct: 443 FKDRKYMSRVLMRVNENIGSKLQYFLSTGNLVSQSGLDLQQVSGYVVVAEKINFHRFISH 502
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TT VRKLLPESWGFLCPVHTPDG PCGLLNH CRI++
Sbjct: 503 FRMVHRGSFFAQLKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRISTK----- 557
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPG----------PPEVLTVLLDGCIVGCIP 399
S ++Q+ P L G P + V LDG I+GC+
Sbjct: 558 -----------------QSDVSQVAPLLYSLGVAPASHTFAAGPSLCCVQLDGKIIGCV- 599
Query: 400 SGEVEKIVAH-IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNI 457
S E KI+A +R LKV + +P DLE+GYVP S G YPGLYLF SR +RPVR +
Sbjct: 600 SHEQGKIIADTLRFLKVEGKTPGLPLDLEIGYVPPSTKGQYPGLYLFAGHSRMMRPVRYL 659
Query: 458 SILSNENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPW 516
L E D++GPFEQV+M I P + S H E PT +LS++AN TP+
Sbjct: 660 P-LDKE----DIVGPFEQVYMNIAVTPQEIENNIHS-----HVEFTPTNILSILANLTPF 709
Query: 517 SDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYP 576
SD NQSPRNMYQCQM KQTM + HR+D KLY LQ+ QTPIV+ + Y +Y +D +P
Sbjct: 710 SDFNQSPRNMYQCQMGKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDEYGMDNFP 769
Query: 577 TGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFR 636
GTNA+VAV++YTGYDM+DAMI+NKS+ ERG +G +Y+ E VDL +R DP ++ F
Sbjct: 770 NGTNAVVAVISYTGYDMDDAMIINKSADERGFAYGTMYKVEKVDLALNRNRGDPITQHFG 829
Query: 637 KSNIEK-----SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVA 691
N E KLD DGLP++G + +P C+ ++ + + T T SEP Y++ V
Sbjct: 830 FGNDEWPKEWLDKLDDDGLPYIGTYVEEGDPICAYFDDTLNKTKTKTYHSSEPAYIEEVN 889
Query: 692 V--DVKNK-KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRP 748
+ D NK ++LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++P
Sbjct: 890 LIGDDSNKFQELQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQP 948
Query: 749 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDL 808
D+IINPHAFPSRMTI M +ES+A K GSLHG +ATP+ + +N D
Sbjct: 949 DVIINPHAFPSRMTIGMFVESLAGKAGSLHGIAQDATPW---IFDENDTPA------DYF 999
Query: 809 GQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVT 868
G L + G+NYHG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T
Sbjct: 1000 GDQLIKAGYNYHGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLT 1059
Query: 869 RQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI 928
QP GEMERD+L+ HG +++L DRL SDY +C CGS+L T
Sbjct: 1060 MQPVKGRKRHGGIRVGEMERDALIGHGTSFILQDRLLNSSDYTQTSICRECGSILTTQ-- 1117
Query: 929 QPQKLPRREIGGLPPRKAPKKVICHACQTS------------------------------ 958
Q +PR IG A +V C C +
Sbjct: 1118 --QSVPR--IG------ASSQVFCRRCAATFEEAKQLIASYEGEDSIFIDDSQIWEDGQG 1167
Query: 959 ------KGMETVAMPYVFRYLAAEFAAMNIKM 984
TVA+P+V +YL +E AM I++
Sbjct: 1168 NKFVGGNNTTTVAIPFVLKYLDSELTAMGIRL 1199
>E9ED63_METAQ (tr|E9ED63) DNA-directed RNA polymerase OS=Metarhizium acridum
(strain CQMa 102) GN=MAC_07811 PE=3 SV=1
Length = 1231
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1058 (41%), Positives = 611/1058 (57%), Gaps = 118/1058 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R GYT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 MAINRPSFQNRGAGYTSYGIIVRSVRPDETSQTNVLHYLNDGNITFRFSWRKNEYLIPVI 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L K A + DR +++ ++ L+++ Q
Sbjct: 266 MILKALVETNDREIFEGLIGPMGSK------ATENTFLTDRVELLLRTYKRYGLYSKSQT 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+ +L + S V L+ V VHL + + DKF +L+FM++KL
Sbjct: 320 RAYLGEKFRVVLGVPETMSDYEVGTEFLRRIVLVHLGNVNVAEEQDLDKFRMLLFMVRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFD 228
++L G +DNPD+LQNQE+LL G L + LKE+L++++ G +D ++R
Sbjct: 380 YALAAGECAVDNPDALQNQEILLGGFLYSQILKERLDEFVSVGVRSSLRDFLRRHPQVSF 439
Query: 229 FSEIFVVKKCFDKTPARA----ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
SE F +K F T R + ++E L TG L + +GLDLQQ AG+TV A++LN+L
Sbjct: 440 TSEDF--RKEFPGTIFRKANENLGNALEYFLSTGNLQSPSGLDLQQTAGFTVVAEKLNFL 497
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF+SHFR VHRGA FA L+TT VRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I
Sbjct: 498 RFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGSPCGLLNHLAHKCKI--- 554
Query: 345 FDSQGSIKDYFKIKISILDILV-DSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEV 403
+ D+ + +S L L + G+ L E + V++DG I+G E
Sbjct: 555 ------VTDH--VDVSKLPALARELGVVDTSSALT----SENVVVMMDGKILGWCSPKES 602
Query: 404 EKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
+I +R KV + +P LE+GYVP S GG+YPG+Y+ ++P+R VRPV+ + +
Sbjct: 603 LRIADCLRYWKVEGTHGVPLQLEIGYVPASNGGSYPGVYITSTPARMVRPVKYLPL---- 658
Query: 464 NKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQS 522
+ D +GP+EQ +M I P + G +TH E PT MLS++AN TP+SD NQS
Sbjct: 659 -QKEDFVGPYEQPYMSIAVVPQETESGV-----STHVEFDPTNMLSILANMTPFSDFNQS 712
Query: 523 PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAI 582
PRNMYQCQM KQTM I++R D K Y +QT QTPIVR + Y D +P G NA+
Sbjct: 713 PRNMYQCQMGKQTMGTPGTAIRYRTDNKSYRIQTGQTPIVRAPLHNDYGFDNFPNGMNAV 772
Query: 583 VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK----- 637
VAV++YTGYDM+DAMILNKS+ ERG HG IY+T+ + L + SR+ + + +
Sbjct: 773 VAVISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKITLKDD-SRTRAAKSVTKAFGFAP 831
Query: 638 ----SNIEKSKLDSDGLPHVGQMIRPDEPYCSI------YNASTSS----THTLKKKGSE 683
S + LD DGLPHVG++++ + C+ YN + + TH K K E
Sbjct: 832 HSYVSASYQGMLDDDGLPHVGRLVQEGDVICAWHTVTPDYNGNLVNLDGITHYEKYKDGE 891
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
+V+ V + + LQ V+I+FR PR+P+IGDKFSSRHGQKGV SQ WP +DMPF
Sbjct: 892 TGFVEEVRLIGAETGSETLQTVSIKFRIPRSPIIGDKFSSRHGQKGVASQKWPAIDMPFS 951
Query: 742 GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKS 801
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ ++
Sbjct: 952 -ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFK---------FDEE 1001
Query: 802 GLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRST 861
+D G L + G++YHG E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQVR+T
Sbjct: 1002 DTAVDYFGHQLMKAGYSYHGNEPMYSGITGEELGADIYIGVVYYQRLRHMVNDKFQVRTT 1061
Query: 862 GTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGS 921
G V T QP GEMERD+LLAHG A+LL DRL CSDY + +C CGS
Sbjct: 1062 GPVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKSWICRRCGS 1121
Query: 922 MLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT----SKGME--------------- 962
L+ Q P + ++AP V C C T + G++
Sbjct: 1122 FLSVQPTVSQFAPGK-------KRAPTTVRCRNCATRLDETDGVDLTEIQGEIWEDGQGN 1174
Query: 963 ---------TVAMPYVFRYLAAEFAAMNIKMTLKLNNG 991
V +P +YL E AAM +K+ ++N G
Sbjct: 1175 RWVGGDHTTQVVVPGALKYLDVELAAMGVKLKYRVNRG 1212
>C5DNH9_LACTC (tr|C5DNH9) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0G17160g PE=3 SV=1
Length = 1197
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1034 (43%), Positives = 608/1034 (58%), Gaps = 103/1034 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 210 MAIIRPSFANRGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGEVTFRFSWRKNEYLIPVV 269
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIEEVRQL--SL 114
++LKAL + +D EI G VG+ + DR +++ ++ L
Sbjct: 270 MILKALCELNDREIF--------------DGIVGSDTSNSFLTDRLELLLRGHKKKYGEL 315
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-DDNFDKFNLLIFMLQKL 173
R Q L Y+G+ F+ +L + + V + +LK V VHL D N DK +L+FM++KL
Sbjct: 316 HNRRQVLQYLGDKFRVVLQASPDATDFQVGEELLKRIVLVHLGDSNEDKSRMLLFMIRKL 375
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDFS 230
+SLV G DNPD+ Q+QEVLL G L + +KEK+E++LQ+ K +++ + +F
Sbjct: 376 YSLVAGECSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQIQSDVNRGLAVNFK 435
Query: 231 EIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
E + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHF
Sbjct: 436 ERKYMTRVLMRV-NENIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHF 494
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
R VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH C+I++ SQ
Sbjct: 495 RMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCKIST---SQSD 551
Query: 351 IKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH- 409
+ I +L G+ P + V LDG IVG S E KI+A
Sbjct: 552 VS-------RIPSLLYSLGVAP--ASHTFTAGPTMCCVQLDGKIVGWC-SHEQGKIIADT 601
Query: 410 IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPV+ + L E D
Sbjct: 602 LRFWKVEGETPGLPLDLEIGYVPPSSRGQYPGLYLFGGHSRMMRPVKYLP-LGKE----D 656
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMYQ
Sbjct: 657 IVGPFEQVYMNIAVTPK----EIQNNTHTHVEFTPTNILSILANLTPFSDFNQSPRNMYQ 712
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM + HR+D KLY LQT QTPIV+ + Y +Y +D +P G NA+VAV++Y
Sbjct: 713 CQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDEYGMDNFPNGFNAVVAVISY 772
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----S 643
TGYDM+DAMI+NKS+ ERG+ +G +Y+ E VDL SR DP ++ F + E
Sbjct: 773 TGYDMDDAMIINKSADERGLGYGTMYKVEKVDLALNRSRGDPITQHFGFGDDEWPKNWLD 832
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDL 700
KLD DGLP +G + +P C+ ++ + + T SEP Y++ V + D +K ++L
Sbjct: 833 KLDDDGLPMIGTYVEEGDPICAFFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESSKFQEL 892
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
Q V+I++R R P IGDKFSSRHGQKGVCS+ WP VDMPF +GM+PD+IINPHAFPSR
Sbjct: 893 QTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTVDMPFS-ESGMQPDIIINPHAFPSR 951
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI M +ES+A K G+LHG +ATP+ + + D G+ L + G+NYH
Sbjct: 952 MTIGMFVESLAGKAGALHGMAHDATPWTFTEEDTPA---------DCFGEQLLQAGYNYH 1002
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E +YSG G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1003 GNEPMYSGATGQELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGG 1062
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
GEMERD+L+ HG ++LL DRL CSDY VC CGS+L T + P+ IG
Sbjct: 1063 IRVGEMERDALIGHGTSFLLQDRLLNCSDYTQTAVCRECGSLLTTHYSVPR------IGS 1116
Query: 941 LPPRKA---------PKKVI-------------CHACQTSKGME--------TVAMPYVF 970
L + K+V+ H + +G + TVA+P+V
Sbjct: 1117 LATVRCRRCAVKFEDAKRVVSKYQGDEQIFIDDSHIWEDGQGNKFVGGGQTTTVAIPFVL 1176
Query: 971 RYLAAEFAAMNIKM 984
+YL +E AAM IK+
Sbjct: 1177 KYLDSELAAMGIKL 1190
>H0Z4D1_TAEGU (tr|H0Z4D1) DNA-directed RNA polymerase (Fragment) OS=Taeniopygia
guttata GN=POLR1B PE=3 SV=1
Length = 1035
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/1006 (42%), Positives = 585/1006 (58%), Gaps = 81/1006 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R + R G+T+ VV+ CV+ + +++ + L+YL N + F + + LP+G
Sbjct: 92 LAMTRQKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFRKELFFLPLG 151
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDR--ARMIIEEVRQL---SLF 115
LKAL++ D +I E+ KG R DD A + E +R +
Sbjct: 152 FALKALVNFPDYQIF--------EELVKG-------REDDTFYANCVTEMLRAVVDAGCL 196
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFS 175
T+ L+Y+G+ F+ L + S + A +L + + +HL + +KF LL M QKL++
Sbjct: 197 TQQNVLDYLGKSFRVKLNLPEWYSNEQAADFLLSNCICIHLTNRTEKFYLLCMMTQKLYA 256
Query: 176 LVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK---DEMKRKSGTFDFSEI 232
G + DNPDSL N EVL PG L ++LKE+LE WLQS + ++ K+ T ++
Sbjct: 257 FAKGECMEDNPDSLMNHEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKANTTLNTDS 316
Query: 233 FVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRA 292
V K F P + E +L TG L + TGL + Q +G V D+LN++R+LSHFR
Sbjct: 317 LV--KAFSLAPD--FTRPFEYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRC 372
Query: 293 VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIK 352
+HRGA+F+ +RTTTVRKLLPESWGFLCPV TPDGEPCGL+NHMT C I + ++
Sbjct: 373 IHRGAAFSQMRTTTVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVT---EMVPVR 429
Query: 353 DYFKIKISILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHI 410
D I +L G+T P P P E V+LDG +VG + +I +
Sbjct: 430 D-------IPPLLCSLGVT---PIDAAPSRPYSECYRVVLDGSMVGWVEQELAPEIAETL 479
Query: 411 RELKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDL 469
R K++ P EV +P++ + YPGL++FT+P R VRPVRN+S NE
Sbjct: 480 RRFKITQEKRFPARAEVVLIPMTGKPSLYPGLFIFTNPCRMVRPVRNLSYGRNE-----W 534
Query: 470 IGPFEQVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
IG EQ+FM + + P TH+E+ P +LSVVAN P+SDHNQSPRNMY
Sbjct: 535 IGTLEQIFMNVATLE------SEVVPGVTTHQELFPHSILSVVANLIPFSDHNQSPRNMY 588
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM F + R+D KLYHL TPQ+P+VR S Y Y +D YP GTN+IVAV++
Sbjct: 589 QCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYGMDSYPVGTNSIVAVIS 648
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK---SNIEKSK 644
Y+GYDMEDAMI+NKSS +RG +G + + E++DL+ + SR+ + K NI + K
Sbjct: 649 YSGYDMEDAMIVNKSSWQRGFAYGSVIKAESIDLSLKASRAGDNLVFGIKPGDPNIGE-K 707
Query: 645 LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQK 702
LD+DGLP VG +++P +P+ S N +T T T+ E VD V + + + +K
Sbjct: 708 LDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSKEVGIVDNVRLCSNDRGTGKFKK 767
Query: 703 VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMT 762
V I R PRNP IGDKF+SRHGQKG+ SQLWP DMPF GM PD++ NPH FPSRMT
Sbjct: 768 VCITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFT-ENGMVPDILFNPHGFPSRMT 826
Query: 763 IAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGL 822
I ML+ES+A K +LHG +ATPF + KK L G+ L G+N+ G
Sbjct: 827 IGMLIESMAGKSAALHGVSYDATPFTFTEKKS---------ALKYFGETLASAGYNFFGT 877
Query: 823 EVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXX 882
E +YSG+ G EL +IF+G VYYQRLRHMVSDKFQVR+TG D VT QP
Sbjct: 878 EKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNVEGGIR 937
Query: 883 FGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLP 942
FGEMERD+LLAHG ++LL DRL CSD +A VC+ CGSM + P E
Sbjct: 938 FGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTS---------PVLEKLSRS 988
Query: 943 PRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ ++ C C + +E V +P+VFRY AE AAMNIK L +
Sbjct: 989 SVTSSRRYSCSTCSEVEAIEVVPVPHVFRYFVAELAAMNIKTKLNV 1034
>D3B127_POLPA (tr|D3B127) DNA-directed RNA polymerase OS=Polysphondylium pallidum
GN=rpa2 PE=3 SV=1
Length = 1109
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/1001 (41%), Positives = 598/1001 (59%), Gaps = 71/1001 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R ++ R GYT V +R VR D+SSLT L+Y+ + F+ + +EY +PV
Sbjct: 166 IALTRQGWTNRGPGYTKFGVTLRSVRPDRSSLTNNLHYISDGQITFRFYFRRQEYFIPVT 225
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+DT+D EI T + +G + DR + + E + L T+ +
Sbjct: 226 LLLKALVDTTDKEIFTQIV----------QGDFENTFLTDRVELTLREQKVKGLNTKDEI 275
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L+YIG ++ + + +A+ ++ ++ VHL D DKFN+LI M+QKL+++V G
Sbjct: 276 LDYIGSRYRHKANLPDSFTNQQIAEYMIDNFFLVHLPDYRDKFNILIVMIQKLYAVVQGK 335
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD-EMKRKSGTFDFSEIFVVKKCF 239
+ DN D+ EVLLP E+L ++L+ + +K + +E KK F
Sbjct: 336 NGCDNIDATSFHEVLLP---------ERLTEYLEVSRAMYLKAINAQKTINEDLAFKKAF 386
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
D+ + I L TG LV+++GLDLQQ +G+ + AD+LN++R++SHFR++HRGA F
Sbjct: 387 DR--SLNIGEKFNYFLATGNLVSSSGLDLQQTSGFAIIADKLNFIRYISHFRSIHRGAFF 444
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A ++TT++RKL+PES+GFLCPVHTPDG PCGLLNH++ C IT K+ ++
Sbjct: 445 ATMKTTSIRKLMPESFGFLCPVHTPDGAPCGLLNHLSANCIITKDPSQDEKSKEGVRL-- 502
Query: 360 SILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS-S 418
+ L+ G+T + + P L V+L+G ++G I G + +V +R LK +
Sbjct: 503 -LPSFLMAHGVTSI--DVTTNFQPNSLPVMLNGKLIGRINDGLAQDLVDLLRYLKSTGDE 559
Query: 419 AMIPDDLEVGYVP--LSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
+P +EV Y P S GG YPG++LFT+ +RF+R V N+ NE LIGP EQ+
Sbjct: 560 KAVPQTMEVAYAPKEQSKGGQYPGIFLFTTGARFMRTVINLKSGKNE-----LIGPQEQL 614
Query: 477 FMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTM 536
+M I + R S+ TH E+ PT M SV AN TP+SD+NQSPRNMYQCQMAKQTM
Sbjct: 615 YMNISIMP--EEVRDST---THCELSPTAMFSVEANLTPFSDYNQSPRNMYQCQMAKQTM 669
Query: 537 AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 596
+ +R D KLY +Q Q PIV T +KY I++YP G NA++AV++ TGYDMEDA
Sbjct: 670 GTPLHSYAYRTDNKLYKVQNIQRPIVATENQSKYRINDYPHGCNAVIAVVSNTGYDMEDA 729
Query: 597 MILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSKLDS----DGLPH 652
MI+NKS+ ERG HG +Y+ E VD+ E SR + + N LD DGLP+
Sbjct: 730 MIINKSAFERGFGHGSVYKNEFVDIDEGKSRLEMGKTSISRPNYTSDNLDQWIDRDGLPY 789
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV-----DVKNKKDLQKVNIRF 707
+G++I+P EPY ++++ + T KG E +++ + + V+ + K ++
Sbjct: 790 IGRLIKPGEPYYTVFSTIENKQVTKNYKGKEDAWIEEIMILGGSTQVRASTMITKFVVKL 849
Query: 708 RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLL 767
R RNPVIGDKFSSRHGQKGV SQLWP+++MPF +G++PD+IINP+AFPSRMTI ML+
Sbjct: 850 RFDRNPVIGDKFSSRHGQKGVLSQLWPEINMPFT-ESGLKPDVIINPNAFPSRMTIGMLV 908
Query: 768 ESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYS 827
E +AAK G++HG+F +AT FR + K ++ G+ L++ GFNY+G E +YS
Sbjct: 909 EILAAKAGAIHGKFQDATAFRFNEKNS---------AVEFFGEQLKQAGFNYYGNEPMYS 959
Query: 828 GVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEME 887
G G+E IF G YYQRLRHMV DK+QVR+TG V+ +TRQP FGEME
Sbjct: 960 GTTGEEFHANIFFGICYYQRLRHMVKDKYQVRATGRVNNITRQPIKGRKVGGGIRFGEME 1019
Query: 888 RDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP 947
RDSLLAHG ++ L+DRL SDY A VC CGS T+ + QK +
Sbjct: 1020 RDSLLAHGTSFCLNDRLMKSSDYCKATVCKQCGS---TTSVAIQKSNYSQF--------- 1067
Query: 948 KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
C C+T + + +A+PYVF YL AE A++NI + L++
Sbjct: 1068 TSSTCITCKTDEHLTNIALPYVFTYLIAELASVNISLKLQI 1108
>M1VXQ2_CLAPU (tr|M1VXQ2) DNA-directed RNA polymerase OS=Claviceps purpurea 20.1
GN=CPUR_00054 PE=3 SV=1
Length = 1232
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/1055 (41%), Positives = 605/1055 (57%), Gaps = 115/1055 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R YT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 MAINRPSFQNRGVNYTPYGIIVRSVRPDETSQTNVLHYLNDGNITFRFSWRKNEYLIPVL 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L G A + DR +++ + ++T+ +
Sbjct: 266 MILKALVETNDREIFEGLVG------PMGSKATENTFLTDRIEVLLRTYKSYGVYTKSET 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+ +L + S V L+ V VHL + + DKF +L+FM +KL
Sbjct: 320 RAYLGEKFRVVLGVSETMSDYDVGTEFLRRIVLVHLGNVNVTDEQDDDKFRMLLFMARKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRK-SGTF 227
++L G +DNPD+LQNQE+LL G L LKE+L+++L G +D ++R+ + TF
Sbjct: 380 YALAAGECAVDNPDALQNQEILLGGFLYAQILKERLDEFLSVGVRSSIRDLLRRRPTVTF 439
Query: 228 ---DFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
DF + F K F K I ++E L TG L + +GLDLQQ AG+TV A++LN+L
Sbjct: 440 TSEDFKKEFPTK-IFQKA-NENIGNALEYFLSTGNLQSPSGLDLQQTAGFTVVAEKLNFL 497
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF+SHFR VHRGA FA L+TT VRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I +
Sbjct: 498 RFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGSPCGLLNHLAHKCKIMTD 557
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
I + ++ ++D S +T E + V+LDG ++G E
Sbjct: 558 HVDASKIPGLVR-ELGVVD--TSSALTD-----------ENVVVMLDGKVIGWCTPKESL 603
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
+I +R KV + +P LE+GYVP S GG+YPG+Y+ ++P+R VRPV+ + +
Sbjct: 604 RIADCLRYWKVEGTHGVPLQLEIGYVPPSRGGSYPGVYITSTPARMVRPVKYLPL----- 658
Query: 465 KNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+ D +GP+EQ +M I P + G +TH E PT MLS++AN TP+SD NQSP
Sbjct: 659 QKEDFVGPYEQPYMSIAVVPQEIESGT-----STHVEFSPTNMLSILANMTPFSDFNQSP 713
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM +++R D K Y +QT QTPIVR + Y D +P G NAIV
Sbjct: 714 RNMYQCQMGKQTMGTPGAALRYRTDNKAYRIQTGQTPIVRAPLHNTYGFDNFPNGMNAIV 773
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------ 637
AV++YTGYDM+DAMILNKS+ ERG HG I++T+ + L + SRS S + +
Sbjct: 774 AVISYTGYDMDDAMILNKSAHERGFGHGTIFKTKKISLKDD-SRSRASKSVTKAFGFAPH 832
Query: 638 ---SNIEKSKLDSDGLPHVGQMIRPDEPYCSI------YNASTSS----THTLKKKGSEP 684
S ++ LD DGLPH+G++++ + C+ YN + + TH K K SE
Sbjct: 833 SYVSADYQAMLDDDGLPHIGRLLQEGDVICAWHTVTPDYNGNLVNLDGITHYEKYKDSET 892
Query: 685 VYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+V+ V + + LQ V+I+ R PR+PVIGDKFSSRHGQKGV SQ WP +D+PF
Sbjct: 893 TFVEEVRLIGAESGTEPLQTVSIKLRIPRSPVIGDKFSSRHGQKGVASQKWPAIDLPFS- 951
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ S +
Sbjct: 952 ESGMQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFQFS---------EEN 1002
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
D G L + G+NYHG E +YSG G+EL +I+IG VYYQRLRHMV+DKFQVR+TG
Sbjct: 1003 TAADYFGHQLMKAGYNYHGNEPMYSGTTGEELAADIYIGVVYYQRLRHMVNDKFQVRTTG 1062
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V T QP GEMERD+LLAHG A+LL DRL CSDY A +C CGS
Sbjct: 1063 PVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKAWICRRCGSF 1122
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTS------------------------ 958
L+ +QP P R P V C C T
Sbjct: 1123 LS---VQPTVTP---FAPGKKRSPPSMVRCRNCATRLDETEAIDLTEVQGEIWEDGQGNC 1176
Query: 959 --KGMET--VAMPYVFRYLAAEFAAMNIKMTLKLN 989
G +T V +P +YL E AAM +K+ KLN
Sbjct: 1177 WVGGDQTTQVVVPGALKYLDVELAAMGVKLKYKLN 1211
>C5E449_ZYGRC (tr|C5E449) DNA-directed RNA polymerase OS=Zygosaccharomyces rouxii
(strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL
Y-229) GN=ZYRO0E02838g PE=3 SV=1
Length = 1196
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1033 (43%), Positives = 601/1033 (58%), Gaps = 90/1033 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ V IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 208 MAIIRPSFANRGAAYSQFGVQIRSVRPDQTSQTNVLHYLHDGQVTFRFSWRKNEYLIPVV 267
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIE--EVRQLSLFTRL 118
+++KAL D SD EI + + + DR +++ + R L R
Sbjct: 268 MIIKALCDISDREIFDGIIGP----------DLSNSFLTDRLELLLRGFKKRYPQLRNRT 317
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQKLFSL 176
Q L Y+G+ F+ + + S V K VL V VHL D N DK LL+FM++KL+SL
Sbjct: 318 QVLQYLGDKFRIVFQAPPDKSDLDVGKEVLHRIVLVHLNGDTNEDKCRLLLFMIRKLYSL 377
Query: 177 VDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVK 236
V G DNPD+ Q+QEVLL G L + LKEK+++++QS ++ R F +
Sbjct: 378 VAGACSPDNPDATQHQEVLLGGFLYGMILKEKVDEYMQSIIAQI-RTDINRGIPANFKDR 436
Query: 237 KCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAV 293
K + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SHFR V
Sbjct: 437 KYMTRVLMRVNDNIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMV 496
Query: 294 HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKD 353
HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ I
Sbjct: 497 HRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGAPCGLLNHFAHKCRISTKQSDVSQIP- 555
Query: 354 YFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIREL 413
SIL L S +Q P + V +DG IVG + I +R
Sbjct: 556 ------SILYSLGVSPASQA-----FAAGPSLCCVQIDGKIVGWTSHEQGRIIADTLRLW 604
Query: 414 KVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGP 472
KV + +P DLE+GYVPLS G YPGLY+F SR +RPVR + L E D++GP
Sbjct: 605 KVEGKTPGLPLDLEIGYVPLSSRGQYPGLYIFGGHSRMMRPVRYLP-LDKE----DIVGP 659
Query: 473 FEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
FEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMYQCQMA
Sbjct: 660 FEQVYMNIAVTPQ----ELQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMA 715
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM + HR+D KLY LQ+ QTP+V+ + Y Y +D +P G NA+VAV++YTGYD
Sbjct: 716 KQTMGTPGVALCHRSDNKLYRLQSGQTPVVKANLYDDYGMDNFPNGINAVVAVISYTGYD 775
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----SKLDS 647
M+DAMI+NKS+ ERG +G +Y+TE VDL+ SR DP S+ F N E KLD
Sbjct: 776 MDDAMIINKSADERGFAYGTMYKTEKVDLSLNRSRGDPISQHFGFGNDEWPKEWLEKLDE 835
Query: 648 DGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDLQKVN 704
DGLP +G + +P + ++ + + T +EP Y++ V + D NK ++LQ V+
Sbjct: 836 DGLPFIGTYVEEGDPIVAYFDDTLNRTKVKTYHSTEPAYIEEVNLIGDESNKLQELQTVS 895
Query: 705 IRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIA 764
I++R R P IGDKFSSRHGQKGVCS+ WP VDMPF TG++PD+IINPHAFPSRMTI
Sbjct: 896 IKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTVDMPFS-ETGIQPDVIINPHAFPSRMTIG 954
Query: 765 MLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEV 824
M +ES+A K G+LHG +A+P+ V +N D G L + G+NYHG E
Sbjct: 955 MFVESLAGKAGTLHGVAQDASPW---VFDENDTPA------DYFGDQLLKSGYNYHGNEP 1005
Query: 825 LYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFG 884
+YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP G
Sbjct: 1006 MYSGASGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGGIRVG 1065
Query: 885 EMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPR-REIGGLPP 943
EMERD+L+ HG ++LL DRL SDY +VC CGS+LAT Q +PR I L
Sbjct: 1066 EMERDALIGHGTSFLLQDRLLNSSDYTQTNVCRECGSILATQ----QSVPRIGSISSLRC 1121
Query: 944 RKA------PKKVIC-------------HACQTSKGME--------TVAMPYVFRYLAAE 976
R+ KK + H + +G + TVA+P+V ++L +E
Sbjct: 1122 RRCAINFDEAKKTLAKFEGSDNVFIDDSHIWEDGQGNKFVGGGETTTVAIPFVLKFLDSE 1181
Query: 977 FAAMNIKMTLKLN 989
AAM I++ ++
Sbjct: 1182 LAAMGIRLRYNVD 1194
>J4HXL5_FIBRA (tr|J4HXL5) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_05481 PE=3 SV=1
Length = 1192
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1054 (42%), Positives = 609/1054 (57%), Gaps = 146/1054 (13%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+S VR SF+ R YT AV IRCVR DQ+S+T L+YL N SA L F + +EY++P+
Sbjct: 220 ISLVRPSFANRGPSYTAYAVQIRCVRPDQTSVTNTLHYLSNGSAMLRFNWRKQEYVIPIM 279
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL+ SD EI + + YE + DR +++ + SL T QC
Sbjct: 280 LILKALVSASDKEI---FEGVMMQDYED-------TFLTDRVELLLRSFKMYSLVTGDQC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L ++G F+ +L N D KA+ ++++QK+ +
Sbjct: 330 LEFLGNKFRVVL----NMPEDWTNKAIG------------------VWLVQKIHA----- 362
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG----KDEMKRKSGTFDFSEIFVVK 236
EVLLPG L + +KE+LE+ L + ++ R + DF + ++
Sbjct: 363 ---------SEAEVLLPGTLYGMIIKERLEEALNGFANGIRQDVNRSEASVDFFDKRYIR 413
Query: 237 KCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRG 296
K +T I + + N L TG L++ TGLDLQQ +G+T+ A++LN+ R++SHFR++HRG
Sbjct: 414 KVLGRTNFD-IGSRMANFLATGNLISPTGLDLQQASGFTIVAEKLNWQRYISHFRSIHRG 472
Query: 297 ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFK 356
A FA L+TTTVRKLLPE+WGFLCPVHTPDG PCGLLNH++ TCRI + +
Sbjct: 473 AFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSRTCRIVTEPAT--------- 523
Query: 357 IKISILDILVDSGMTQ-LVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKV 415
I I +L GMTQ P + L V LDG ++G P+ ++++ ++R K
Sbjct: 524 -VIHIPALLAAHGMTQAFAPSI---DGRRNLCVQLDGKLIGWAPAPVLQQLATNLRIWKT 579
Query: 416 SSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQ 475
IP DLE+G+VP+S G YPGLY+F+S +R +RPV+ ++ N D IG FEQ
Sbjct: 580 EHKHEIPLDLEIGFVPVSKAGQYPGLYIFSSRARMMRPVKYLA-----NGRDDQIGSFEQ 634
Query: 476 VFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
V+M+I C P+ + G +TH E PT LS++AN TP+SD NQSPRN+YQCQM KQ
Sbjct: 635 VYMDIACTPEEIEEG-----VSTHVEHSPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQ 689
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM + ++HR D KLY LQ+ Q+P+VR + + Y +D +P GTNAIVAV++YTGYDME
Sbjct: 690 TMGTPATALRHRTDNKLYRLQSGQSPVVRPALHNTYGMDSFPNGTNAIVAVISYTGYDME 749
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS------------RMF-RKSNIE 641
DAMILNKS+ ERG +G +Y+++TVDL + S SS R F K +
Sbjct: 750 DAMILNKSAHERGFGYGTVYKSQTVDLKDMPGTSRNSSTPTLHFGFGYDIRTFGDKQHPC 809
Query: 642 KSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKD-- 699
L DGLP VG + +P + + +T T +K KG E YVD V + + D
Sbjct: 810 CDFLGDDGLPFVGVRLSAGDPLAAYVDDTTGRTKFVKYKGDEVAYVDTVRLLGSDAGDSE 869
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQKV+I R R+PVIGDKFSSRHGQKGVCSQ WP +DMPF +GM+PD+IINPHAFPS
Sbjct: 870 LQKVHISLRITRSPVIGDKFSSRHGQKGVCSQKWPAIDMPFS-ESGMQPDVIINPHAFPS 928
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K G++HG +ATPF+ S ++D +D GQ L G+NY
Sbjct: 929 RMTIGMLVESMAGKAGAMHGLAQDATPFQFS-EEDTA--------VDYFGQQLLAAGYNY 979
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
+G E +YSG+ G+E +I+IG VYYQRLRHMV DKFQVR+TG VD VTRQP
Sbjct: 980 YGNEPMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTRQPVKGRKRAG 1039
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSF--IQPQKLPRRE 937
FGEMERD+L+AHG ++LL DRL CSDY A VC CGS+++ + + ++
Sbjct: 1040 GIRFGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDVSLGEMVIGA 1099
Query: 938 IGGLPPRKAPKKVICHACQ----------------------------------------T 957
G L P P C C+
Sbjct: 1100 SGKLKP-TGPGGEYCRVCRATAEEEDVRARQALANGQNDRPGVQGDLRVAIPSQHVLGPA 1158
Query: 958 SKG--METVAMPYVFRYLAAEFAAMNIKMTLKLN 989
SKG ++ VA+PYVFRYL AE A+M I ++L+++
Sbjct: 1159 SKGGDLDIVAVPYVFRYLCAELASMGIAISLEVH 1192
>M2YUG9_9PEZI (tr|M2YUG9) DNA-directed RNA polymerase OS=Pseudocercospora fijiensis
CIRAD86 GN=MYCFIDRAFT_58897 PE=3 SV=1
Length = 1209
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/1039 (41%), Positives = 604/1039 (58%), Gaps = 88/1039 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 206 MAIERPSFVNRGAAYTKYGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVL 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL +T+D +I L GK Q V DR +++ + ++ ++ +
Sbjct: 266 MILKALTETNDRQIFEGLVGPAG-----GKDLESKQFVSDRVELLLRTYKAYNIHSKAKT 320
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLD-------DNFDKFNLLIFMLQKL 173
Y+G F+ +L + + + +L+ V HL ++ DK +L+FM++KL
Sbjct: 321 RAYLGSKFRVVLGMPDDATDEACGTELLRKIVLPHLGCYDVTEANDADKARMLLFMIRKL 380
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIF 233
++LV+G +DNPD++QNQE+LLPG L + +KE++E+WL S + + T ++
Sbjct: 381 YALVEGECAVDNPDAVQNQEILLPGALYGMIVKERIEEWLNSIGAQSREYGRTNNWPSFT 440
Query: 234 VVKKCFDKTPARAISTSIENM-------LKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
+ D P + I + EN+ + TG LV+ +GLDLQQ +G+TV A+++N+ RF
Sbjct: 441 SAEFDRDFAP-KVIRKTNENIGQGLDYFMATGNLVSPSGLDLQQVSGFTVVAEKINFYRF 499
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C++ +
Sbjct: 500 ISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKVET--- 556
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
S D + + I V S P + + V LDG ++G + + I
Sbjct: 557 ---SSTDVSHVPALVAQIGVSSTSE--------PTLHDSVVVQLDGRVLGYCSPKQAKTI 605
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
+R KV + +P +LEVGYVPLS GG YPG+Y+F+ +R +RPV+ + +
Sbjct: 606 ADTLRYWKVEGTHNVPKELEVGYVPLSNGGQYPGVYMFSQAARMLRPVKYLPLDKE---- 661
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNM 526
D +GPFEQ +M I C + SS TH E T +LS+VAN+TP+S+ NQSPRNM
Sbjct: 662 -DFVGPFEQPYMSIACTEP----EISSGDTTHVEYDVTNILSIVANQTPFSNFNQSPRNM 716
Query: 527 YQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL 586
YQCQM KQTM +++R D K Y LQT QTP+VRT + +Y +D +P GTNA+VAV+
Sbjct: 717 YQCQMGKQTMGTPGTALKYRTDNKSYRLQTGQTPVVRTPKHNEYGLDNFPNGTNAVVAVI 776
Query: 587 AYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQG----SRSDPSSRM--FRKSNI 640
+YTGYDM+DAMILNKS+ ERG +G IY+ + +DL E+ RS + M F + I
Sbjct: 777 SYTGYDMDDAMILNKSAHERGFGYGTIYKAKKIDLAEENKAARGRSTVVTHMFGFAPTGI 836
Query: 641 EKSK----LDSDGLPHVGQMIRPDE-----------PYCSIYNASTSSTHTLKKKGSEPV 685
K++ LD DG VG ++ + P Y TH K K +E
Sbjct: 837 IKAQWRNTLDDDGFAQVGVKVKEGDAIAAFYTVVKNPLTGEYENKDGVTHIQKYKEAEEG 896
Query: 686 YVDYVAV---DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
YV+ + + + + + Q +++RFR PR PVIGDKFSSRHGQKGV SQ WP VDMPF
Sbjct: 897 YVEEIKLIGNETGSNEPCQAISMRFRIPRPPVIGDKFSSRHGQKGVMSQKWPTVDMPFT- 955
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ K GE+
Sbjct: 956 ESGMQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDSTPFK--FKDKEGETA--- 1010
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
++ G L+ G+NY+G E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQVR+TG
Sbjct: 1011 --IEYFGHQLKRAGYNYYGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKFQVRTTG 1068
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V +T QP GEMERD+L+AHG ++LL DRL CSDY A +C CGS
Sbjct: 1069 PVTPLTGQPIKGRAKGGGIRVGEMERDALIAHGTSFLLQDRLMNCSDYTKASICKACGSF 1128
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTS-----KG--------METVAMPYV 969
L+ Q RRE G + R+ ++ + ++ KG + VA+P V
Sbjct: 1129 LSVQPSSGQYTRRREGGRVRCRRCSRRALSSDSKSECWEDHKGDKWFGGDDVTVVAVPGV 1188
Query: 970 FRYLAAEFAAMNIKMTLKL 988
+YL E AAM I+M +
Sbjct: 1189 LKYLDVELAAMGIRMKFDV 1207
>H0H2A4_9SACH (tr|H0H2A4) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_10457 PE=3 SV=1
Length = 1203
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1042 (43%), Positives = 605/1042 (58%), Gaps = 118/1042 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+P
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRQDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPAV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPQL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL + N DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDHSDLEVGQEVLDRIVLVHLGKNGNQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + K + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSKVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRISTE----- 554
Query: 350 SIKDYFKIKIS-ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVA 408
++ +S I IL G+ P + V +DG I+G I S E KI+A
Sbjct: 555 ------QLDVSKIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWI-SHEQGKIIA 605
Query: 409 H-IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 606 DTLRYWKVEGKTPGLPVDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE--- 661
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNM 526
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNM
Sbjct: 662 -DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNM 716
Query: 527 YQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL 586
YQCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV+
Sbjct: 717 YQCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVI 776
Query: 587 AYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK---- 642
+YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL SR DP ++ F N E
Sbjct: 777 SYTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRSRGDPITQHFGFGNDEWPKEW 836
Query: 643 -SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-K 698
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK +
Sbjct: 837 LEKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQ 896
Query: 699 DLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFP 758
+LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFP
Sbjct: 897 ELQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFP 955
Query: 759 SRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFN 818
SRMTI M +ES+A K G+LHG ++TP+ +D+ + D G L + G+N
Sbjct: 956 SRMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGDQLAKAGYN 1006
Query: 819 YHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 878
YHG E +YSG G+EL +I++G VYYQRLRHMV DKFQVRSTG V+ +T QP
Sbjct: 1007 YHGNEPMYSGATGEELRADIYVGVVYYQRLRHMVDDKFQVRSTGPVNSLTMQPVKGRKRH 1066
Query: 879 XXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREI 938
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR I
Sbjct: 1067 GGIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--I 1120
Query: 939 GGLPPRKAPKKVICHAC-------------------------------QTSK---GME-- 962
G + V C C Q +K G E
Sbjct: 1121 GSI------STVCCRRCSMRFEDAKKLLTKSEDGENIFIDDSQIWEDGQGNKFVGGNETT 1174
Query: 963 TVAMPYVFRYLAAEFAAMNIKM 984
TVA+P+V +YL +E +AM I++
Sbjct: 1175 TVAIPFVLKYLDSELSAMGIRL 1196
>E7QLS3_YEASZ (tr|E7QLS3) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Zymaflore VL3) GN=VL3_4973 PE=3 SV=1
Length = 1203
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1041 (43%), Positives = 606/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPHL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D + DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSRVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG I+G + S E KI+A
Sbjct: 557 DVS-------RIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWV-SHEQGKIIAD 606
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 607 TLRYWKVEGKTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE---- 661
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 662 DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 717
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 718 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVIS 777
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL +R DP ++ F N E
Sbjct: 778 YTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRNRGDPITQHFGFGNDEWPKEWL 837
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 838 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 897
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 898 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPS 956
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TP+ +D+ + D G+ L + G+NY
Sbjct: 957 RMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGEQLAKAGYNY 1007
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 HGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1067
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1068 GIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IG 1121
Query: 940 GLPPRKAPKKVICHAC-------------------------------QTSK---GME--T 963
+ V C C Q +K G E T
Sbjct: 1122 SI------STVCCRRCSMRFEDAKKLLTKSEDGEKIFIDDSQIWEDGQGNKFVGGNETTT 1175
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E +AM I++
Sbjct: 1176 VAIPFVLKYLDSELSAMGIRL 1196
>C8ZJ35_YEAS8 (tr|C8ZJ35) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1P2_3224g PE=3 SV=1
Length = 1203
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1041 (43%), Positives = 606/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPHL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D + DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSRVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG I+G + S E KI+A
Sbjct: 557 DVS-------RIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWV-SHEQGKIIAD 606
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 607 TLRYWKVEGKTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE---- 661
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 662 DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 717
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 718 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVIS 777
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL +R DP ++ F N E
Sbjct: 778 YTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRNRGDPITQHFGFGNDEWPKEWL 837
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 838 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 897
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 898 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPS 956
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TP+ +D+ + D G+ L + G+NY
Sbjct: 957 RMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGEQLAKAGYNY 1007
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 HGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1067
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1068 GIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IG 1121
Query: 940 GLPPRKAPKKVICHAC-------------------------------QTSK---GME--T 963
+ V C C Q +K G E T
Sbjct: 1122 SI------STVCCRRCSMRFEDAKKLLTKSEDGEKIFIDDSQIWEDGQGNKFVGGNETTT 1175
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E +AM I++
Sbjct: 1176 VAIPFVLKYLDSELSAMGIRL 1196
>B3LL71_YEAS1 (tr|B3LL71) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SCRG_02500 PE=3 SV=1
Length = 1203
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1041 (43%), Positives = 606/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPHL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D + DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSRVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG I+G + S E KI+A
Sbjct: 557 DVS-------RIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWV-SHEQGKIIAD 606
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 607 TLRYWKVEGKTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE---- 661
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 662 DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 717
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 718 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVIS 777
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL +R DP ++ F N E
Sbjct: 778 YTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRNRGDPITQHFGFGNDEWPKEWL 837
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 838 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 897
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 898 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPS 956
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TP+ +D+ + D G+ L + G+NY
Sbjct: 957 RMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGEQLAKAGYNY 1007
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 HGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1067
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1068 GIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IG 1121
Query: 940 GLPPRKAPKKVICHAC-------------------------------QTSK---GME--T 963
+ V C C Q +K G E T
Sbjct: 1122 SI------STVCCRRCSMRFEDAKKLLTKSEDGEKIFIDDSQIWEDGQGNKFVGGNETTT 1175
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E +AM I++
Sbjct: 1176 VAIPFVLKYLDSELSAMGIRL 1196
>L2G8A7_COLGN (tr|L2G8A7) DNA-directed RNA polymerase OS=Colletotrichum
gloeosporioides (strain Nara gc5) GN=CGGC5_5552 PE=3 SV=1
Length = 1225
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1061 (41%), Positives = 595/1061 (56%), Gaps = 127/1061 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R +GYT +++R VR D++S T L+YL + + F K EYL+PV
Sbjct: 205 MAINRPSFQNRGQGYTPYGIILRSVRPDETSQTNVLHYLSDGNMTFRFSWKKNEYLIPVM 264
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L + K K + DR +++ + L+++ +
Sbjct: 265 MILKALVETNDREIFEGLIGLSHSKSAK------NTFLTDRVELLLRTYKSYGLYSKTET 318
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+ ++ S V L+ V VHL +DN DKF L+FM++K
Sbjct: 319 RAYLGEKFRVVMGVPDTMSNYDVGTEFLRKIVLVHLGNVNVTEKEDN-DKFRTLLFMIRK 377
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFD 228
L++LV G +DNPD+LQNQEVLL G L + +KE+LE++L + E RK
Sbjct: 378 LYALVAGDCAVDNPDALQNQEVLLGGFLYGMIIKERLEEFLTTAVRLSLREWCRKHPATP 437
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F+ K+ A + +E L TG L + +GLDLQQ AG+TV A++LN+LR
Sbjct: 438 FTSQEFAKEFPGNIFRHANENVGNGLEYFLSTGNLTSPSGLDLQQTAGFTVVAEKLNFLR 497
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
F+SHFR +HRGA FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I T
Sbjct: 498 FISHFRMIHRGAFFAELKTTTVRKLLPESWGFMCPVHTPDGAPCGLLNHLAHKCKIMTES 557
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D+ I ++ + G Q E + ++LDG I+G E
Sbjct: 558 VDAS-----------KIPALVTELGAVQTSSA----ATDESVVIMLDGRIIGFCTPRESL 602
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
+I +R KV + +P LE+GYVP S GG+YPG+YL ++P+R VRPV+ + +
Sbjct: 603 RIADTLRHWKVEGTHGVPLQLEIGYVPPSHGGSYPGVYLASAPARMVRPVKYLPL----- 657
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
D +GP EQ +M I + S TH E PT MLS++AN TP+SD NQSPR
Sbjct: 658 DKEDFVGPHEQPYMSIAVVEN----EIVSGETTHVEFSPTNMLSILANMTPFSDFNQSPR 713
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQTM ++HR D K+Y LQ+ QTP+VR+ + Y D +P GTNA+VA
Sbjct: 714 NMYQCQMGKQTMGTPGAALRHRTDNKMYRLQSGQTPVVRSPLHNAYGFDNFPNGTNAVVA 773
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-- 642
V++YTGYDM+DAMILNKS+ ERG HG IY+T+ V L ++ SR NI K
Sbjct: 774 VISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKVSLKDE-------SRTRSVKNITKLF 826
Query: 643 -------------SKLDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKK 679
+ LD DGLP VG+M++ + C+ + S TH K
Sbjct: 827 GFAPGGFVKGHYRAALDEDGLPFVGRMVQEGDVLCAWHTVSADYSGKLINLDGQTHYEKY 886
Query: 680 KGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVD 737
K SE +++ V V + Q V+I+ R PR+PVIGDKFSSRHGQKGV SQ WP +D
Sbjct: 887 KESETAFIEEVRVIGSETGNEPAQTVSIKLRIPRSPVIGDKFSSRHGQKGVASQKWPAID 946
Query: 738 MPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGE 797
MPF +GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF K N E
Sbjct: 947 MPFS-ESGMQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPF-----KFNEE 1000
Query: 798 SEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQ 857
+ + D G L + G+NYHG E +YSG+ G+EL +I++G VYYQRLRHMV+DK+Q
Sbjct: 1001 NTAA----DYFGHQLMKAGYNYHGNEPMYSGITGEELAADIYVGVVYYQRLRHMVNDKYQ 1056
Query: 858 VRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 917
VR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY +C
Sbjct: 1057 VRTTGPVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKTWICR 1116
Query: 918 LCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT-------------------- 957
CGS L+ +QP P + +K V C C T
Sbjct: 1117 SCGSFLS---VQPTVSPF-----VGKKKQVTTVRCRNCATQLDAGDAVSAAKVEGEIWED 1168
Query: 958 --------SKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
+ V +P +YL E AAM +K+ ++++
Sbjct: 1169 GQGNQWVGGENTTMVVVPGALKYLDVELAAMGVKLKYRVDS 1209
>C7GV35_YEAS2 (tr|C7GV35) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RPA135 PE=3 SV=1
Length = 1203
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1041 (43%), Positives = 606/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPHL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D + DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSRVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG I+G + S E KI+A
Sbjct: 557 DVS-------RIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWV-SHEQGKIIAD 606
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 607 TLRYWKVEGKTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE---- 661
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 662 DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 717
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 718 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVIS 777
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL +R DP ++ F N E
Sbjct: 778 YTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRNRGDPITQHFGFGNDEWPKEWL 837
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 838 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 897
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 898 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPS 956
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TP+ +D+ + D G+ L + G+NY
Sbjct: 957 RMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGEQLAKAGYNY 1007
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 HGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1067
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1068 GIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IG 1121
Query: 940 GLPPRKAPKKVICHAC-------------------------------QTSK---GME--T 963
+ V C C Q +K G E T
Sbjct: 1122 SI------STVCCRRCSMRFEDAKKLLTKSEDGEKIFIGDSQIWEDGQGNKFVGGNETTT 1175
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E +AM I++
Sbjct: 1176 VAIPFVLKYLDSELSAMGIRL 1196
>I2H4Z4_TETBL (tr|I2H4Z4) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0E03910 PE=3 SV=1
Length = 1204
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/1036 (43%), Positives = 610/1036 (58%), Gaps = 102/1036 (9%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + +R VR DQ+S T L+YL + F + EYL+PV
Sbjct: 212 MAIIRPSFANRGASYSPYGIQLRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVI 271
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIE--EVRQLSLFTRL 118
++LKAL+D SD EI + V + DR +++ + R L R
Sbjct: 272 MILKALVDISDREIFDGIVG----------DDVKNSFLTDRLELLLRGFKNRYPQLHNRT 321
Query: 119 QCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQ 171
Q L Y+G+ F+ + + S V K VL V VHL + N DK LL+FM++
Sbjct: 322 QVLQYLGDKFRVVFQSSPDKSDYEVGKEVLNRIVLVHLGNSSIENESNSDKVRLLLFMIR 381
Query: 172 KLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFD 228
KL+SLV G DNPD+ Q+QEVLL G L + +KEK++++LQ+ +++ + +
Sbjct: 382 KLYSLVAGECCPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNILAQVRADINRGLAIN 441
Query: 229 FSEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
FS+ +K + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ R
Sbjct: 442 FSD----RKYMTRVLMRVNDNIGSKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHR 497
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYF 345
FL+HFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++
Sbjct: 498 FLAHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST-- 555
Query: 346 DSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEK 405
+ D KI +IL L S +Q P + V LDG IVG + S E K
Sbjct: 556 ----TQSDVSKIP-AILYSLGVSPASQT-----YAAGPSLCCVQLDGKIVGWV-SHEQGK 604
Query: 406 IVAH-IRELKVSSSA-MIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
IVA +R KV +P DLE+GYVP S G YPGL+LF SR +RPVR + L E
Sbjct: 605 IVADTLRFWKVEGKTDGLPLDLEIGYVPPSSKGQYPGLFLFAGHSRMMRPVRYLP-LDKE 663
Query: 464 NKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
D++GPFEQ +M I + TH E PT +LS++AN TP+SD NQSP
Sbjct: 664 ----DIVGPFEQTYMNIAVTPQ----EIQNNIHTHVEFTPTNILSILANLTPFSDFNQSP 715
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM + HR+D KLY LQ+ QTPIV+ + Y +Y +D +P GTNA+V
Sbjct: 716 RNMYQCQMGKQTMGTPGVALCHRSDNKLYRLQSGQTPIVKANLYDEYGMDNFPNGTNAVV 775
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK- 642
AV++YTGYDM+DAMI+NKS+ ERG +G +Y+ E VDL+ SR DP ++ N E
Sbjct: 776 AVISYTGYDMDDAMIINKSADERGFGYGTMYKVEKVDLSLNRSRGDPITQHSGFGNDEWP 835
Query: 643 ----SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKN 696
KLD DGLP++G + +P C+ ++ +T+ T SEP Y++ V + D N
Sbjct: 836 KEWLEKLDEDGLPYIGTYVEEGDPICAYFDETTNRTKIKTYHSSEPGYIEEVNLIGDESN 895
Query: 697 K-KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPH 755
K +++Q + I+FR R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPH
Sbjct: 896 KSQEIQNITIKFRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPH 954
Query: 756 AFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREK 815
AFPSRMTI M +ES+A K G+LHG +ATP+ +D+ + D G+ L
Sbjct: 955 AFPSRMTIGMFVESLAGKAGALHGMAHDATPW--IFNEDDTPA-------DYFGEQLLSA 1005
Query: 816 GFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXX 875
G+NYHG E +YSGV G+EL +I+IG VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1006 GYNYHGNEPMYSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGR 1065
Query: 876 XXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPR 935
GEMERD+L+ HG ++LL DRL SDY VC CGS+L T + +PR
Sbjct: 1066 KRHGGIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQTAVCRDCGSILTTQ----RSVPR 1121
Query: 936 -REIGGLPPRKA------PKKVI------------CHACQTSKGME--------TVAMPY 968
+ + R+ KK++ H + +G + TVA+P+
Sbjct: 1122 LGSVSSIRCRRCAVSLDQAKKMLEKTSDESIFINESHIWEDGQGNKFVGGSETTTVAIPF 1181
Query: 969 VFRYLAAEFAAMNIKM 984
V +YL +E AM IK+
Sbjct: 1182 VLKYLDSELNAMGIKL 1197
>K8F4S1_9CHLO (tr|K8F4S1) DNA-directed RNA polymerase OS=Bathycoccus prasinos
GN=RPB2 PE=3 SV=1
Length = 1149
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/1013 (42%), Positives = 593/1013 (58%), Gaps = 83/1013 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
+ VR+SF +R ++ A IRCV + S T++L+Y++ SARLG ++ +E+ +PVG
Sbjct: 197 LGLVRSSFLRRGALFSKFATSIRCVDKTEISSTIRLHYMKTGSARLGLTIERQEFYIPVG 256
Query: 61 IVLKALIDTSDLEI------RTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSL 114
I+++A+ D+S+ EI R N ++C ++D + E +
Sbjct: 257 IIIRAITDSSEKEIFMNSDYRCNSENCL---------------INDCIINCLHEATDADI 301
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLF 174
+++ L YIG++F+ +L K S + + + Y+F HL +K NLL+FMLQKL
Sbjct: 302 LSKMDALRYIGKYFRNLLRGQKFVSDVELGEFFIARYIFTHLKRQSEKANLLLFMLQKLT 361
Query: 175 SLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFV 234
+LV G DNPD+L +QE++LPG L+ L EK+E L+ + + + FD S
Sbjct: 362 ALVQGLCKPDNPDTLAHQEIMLPGSLLQGLLYEKMEHVLEQIRLKFQ---ALFDVSYTDK 418
Query: 235 VKKCFDKTPARAISTSI---------ENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
V+ + +I I E L TG LV+ +GL L Q +G+T+ AD+LNYLR
Sbjct: 419 VEALEPNSIQNSILQVIQKYDIGRHFEYFLATGNLVSKSGLGLSQSSGFTIVADKLNYLR 478
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI---- 341
FLSHFR+VHRGA F LRTTT+RKLLPESWGFLCP+HTPDG PCGLLNH+ C+I
Sbjct: 479 FLSHFRSVHRGAYFTELRTTTIRKLLPESWGFLCPIHTPDGSPCGLLNHLAGECKIVVAK 538
Query: 342 ---TSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCI 398
T + + ++K + + DS L +L VLLDG ++G +
Sbjct: 539 TRDTDFDLVRKTVKKSLGLNFEFTN---DSNRENL---------ESLLPVLLDGLLIGSL 586
Query: 399 PSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNIS 458
+ V +R KV SS+ IP DLE+ +V GG YPG+Y+F+S SR VRPV
Sbjct: 587 HERDAANAVRVLRRAKVDSSSYIPRDLEIAHVTFRKGGVYPGIYIFSSSSRLVRPV---- 642
Query: 459 ILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSD 518
L N++LIG EQ FM I+ DG + SF +HEEI+P LS VA+ TPWSD
Sbjct: 643 -LQTSGGNVELIGTLEQSFMSIKTQDGENRDFCKSFKYSHEEIYPDSFLSAVASLTPWSD 701
Query: 519 HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTG 578
+NQSPRNMYQCQM KQTM + R+D KLY L TPQ PI T TY KY ID YP G
Sbjct: 702 YNQSPRNMYQCQMGKQTMGVPMHSFPFRSDSKLYRLHTPQRPIALTKTYDKYGIDNYPLG 761
Query: 579 TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKS 638
TNA+VAVL+YTGYDMEDAMI+NK S+ERG+ H +Y+TE + L ++ S +
Sbjct: 762 TNAVVAVLSYTGYDMEDAMIMNKFSMERGLAHATLYKTEGLTLKDKNDTFTVSGPL---- 817
Query: 639 NIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDV-KNK 697
++K D+ LP G +++ + + S+ N + KG + VD V + + +
Sbjct: 818 --NQTKFDASPLP--GSILQKGDSFISVSNRISGKLKKTMLKGEDKGIVDRVKISASQEQ 873
Query: 698 KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAF 757
+K+++ R RNP+IGDKFSSRHGQKGV S LWP+ D+PF G++PD+IINPHAF
Sbjct: 874 SSYEKLDVTLRFNRNPIIGDKFSSRHGQKGVLSYLWPEEDLPFIERNGIKPDIIINPHAF 933
Query: 758 PSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGF 817
PSRMTI ML+ES+A+K G+L G FV+A+PF+ + E + L++ + L++ G+
Sbjct: 934 PSRMTIGMLMESLASKEGALSGNFVDASPFKAL------KEEHLTIPLNNHYERLKDMGY 987
Query: 818 NYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXX 877
+ G E + +G G +IFIG VYYQRLRHMVSDKFQVRS G + +T+QP
Sbjct: 988 KFTGTETMINGFTGCTFEVDIFIGLVYYQRLRHMVSDKFQVRSEGPNNPLTKQPIKGRKM 1047
Query: 878 XXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRRE 937
FGEMERDSLL+HG A L+ DRL SD H +CS CGSM+ S +Q L E
Sbjct: 1048 GGGIRFGEMERDSLLSHGVANLIQDRLLASSDKHSFKICSSCGSMI--SHLQKVALRNEE 1105
Query: 938 IGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
IC C+++ + V +PYV++YL +E AAMNI++ LN+
Sbjct: 1106 CS---------NDICITCRSTSNIVNVHVPYVYKYLISELAAMNIRLCADLND 1149
>G2WPJ0_YEASK (tr|G2WPJ0) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RPA135 PE=3
SV=1
Length = 1203
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1041 (43%), Positives = 606/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPQL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D + DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSRVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG I+G + S E KI+A
Sbjct: 557 DVS-------RIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWV-SHEQGKIIAD 606
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 607 TLRYWKVEGKTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE---- 661
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 662 DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 717
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 718 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVIS 777
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL +R DP ++ F N E
Sbjct: 778 YTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRNRGDPITQHFGFGNDEWPKEWL 837
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 838 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 897
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 898 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPS 956
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TP+ +D+ + D G+ L + G+NY
Sbjct: 957 RMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGEQLAKAGYNY 1007
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 HGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1067
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1068 GIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IG 1121
Query: 940 GLPPRKAPKKVICHAC-------------------------------QTSK---GME--T 963
+ V C C Q +K G E T
Sbjct: 1122 SI------STVCCRRCSMRFEDAKKLLTKSEDGEKIFIDDSQIWEDGQGNKFVGGNETTT 1175
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E +AM I++
Sbjct: 1176 VAIPFVLKYLDSELSAMGIRL 1196
>A6ZWQ5_YEAS7 (tr|A6ZWQ5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RPA135 PE=3 SV=1
Length = 1203
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1041 (43%), Positives = 606/1041 (58%), Gaps = 116/1041 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S T L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPQL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D + DKF +L+FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMK---RKSGTFDF 229
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ +++ + +F
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQVRMDINRGMAINF 440
Query: 230 SEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
+ + + + I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 441 KDKRYMSRVLMRV-NENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG I+G + S E KI+A
Sbjct: 557 DVS-------RIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKIIGWV-SHEQGKIIAD 606
Query: 410 -IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNI 467
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E
Sbjct: 607 TLRYWKVEGKTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE---- 661
Query: 468 DLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMY 527
D++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMY
Sbjct: 662 DIVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMY 717
Query: 528 QCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLA 587
QCQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++
Sbjct: 718 QCQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVIS 777
Query: 588 YTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK----- 642
YTGYDM+DAMI+NKS+ ERG +G +Y+TE VDL +R DP ++ F N E
Sbjct: 778 YTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRNRGDPITQHFGFGNDEWPKEWL 837
Query: 643 SKLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KD 699
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++
Sbjct: 838 EKLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQE 897
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
LQ V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPS
Sbjct: 898 LQTVSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPS 956
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI M +ES+A K G+LHG ++TP+ +D+ + D G+ L + G+NY
Sbjct: 957 RMTIGMFVESLAGKAGALHGIAQDSTPW--IFNEDDTPA-------DYFGEQLAKAGYNY 1007
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
HG E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1008 HGNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHG 1067
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1068 GIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IG 1121
Query: 940 GLPPRKAPKKVICHAC-------------------------------QTSK---GME--T 963
+ V C C Q +K G E T
Sbjct: 1122 SI------STVCCRRCSMRFEDAKKLLTKSEDGEKIFIDDSQIWEDGQGNKFVGGNETTT 1175
Query: 964 VAMPYVFRYLAAEFAAMNIKM 984
VA+P+V +YL +E +AM I++
Sbjct: 1176 VAIPFVLKYLDSELSAMGIRL 1196
>R0K0E7_ANAPL (tr|R0K0E7) DNA-directed RNA polymerase I subunit RPA2 (Fragment)
OS=Anas platyrhynchos GN=Anapl_08319 PE=4 SV=1
Length = 1065
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/999 (41%), Positives = 586/999 (58%), Gaps = 71/999 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R+ + R G+T+ VV+ CV+ + +++ + L+YL N L F + + LP+G
Sbjct: 125 LAMTRHKWKNRGPGFTEYGVVMHCVKEEHAAINMNLHYLENGCVMLNFIFQKELFFLPLG 184
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL++ +D +I L +K V + R + + +T+
Sbjct: 185 FALKALVNFTDYQIFKELVK------DKENDTFYVNCVTEMLRAVADA----GCYTQQNV 234
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ L + S + A + V +HL D +KF LL M +KL++ G
Sbjct: 235 LEYLGKSFRVKLNLPEWYSNEQAADLIFNKCVCIHLTDRTEKFYLLCMMTRKLYAFAKGE 294
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ DNPDSL NQEVL PG L ++LKE+LE+WLQS + +++++ D + + K F
Sbjct: 295 CMEDNPDSLMNQEVLTPGQLYLMFLKERLENWLQSVRFVLEKRTEKADININADSLIKAF 354
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
T ++ + E +L TG L + TGL + Q +G V D+LN++R+LSHFR +HRG++F
Sbjct: 355 SMTAD--VTKAFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAF 412
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVRKLLPESWGFLCPV TPDGEPCGL+NHMT C I + S++D +
Sbjct: 413 AQMRTTTVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVT---EMVSVRDLPPLLC 469
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
++ + +D+ P P E V+LDG +VG + ++ +R K++
Sbjct: 470 ALGVVPIDA----------TPSRPYAECYRVVLDGAVVGWVEWDLAPQLAEALRRFKITQ 519
Query: 418 SAMIPDDLEVGYVPLS-MGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
P EV +P++ YPGL++FT+P R VRPV+N+ E IG EQ+
Sbjct: 520 EKRFPARAEVVLIPMTGKPSLYPGLFIFTTPCRMVRPVKNLLYGRKE-----WIGTLEQI 574
Query: 477 FMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
FM + + P TH E+ P +LSVVAN P+SDHNQSPRNMYQCQM KQ
Sbjct: 575 FMNVATME------SEVVPGVTTHLELFPHSILSVVANLIPFSDHNQSPRNMYQCQMGKQ 628
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM F + R+D KLY L TPQ+P+VR Y Y++D YP GTNAIVAV++Y+GYDME
Sbjct: 629 TMGFPVYNYRDRSDNKLYLLHTPQSPLVRPRMYDFYSMDSYPVGTNAIVAVISYSGYDME 688
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK---SNIEKSKLDSDGLP 651
DAMI+NKSS ERG +G + + E++DL+ + +R D + + N+ + KLD+DGLP
Sbjct: 689 DAMIVNKSSWERGFAYGSVIKMESIDLSLKANRGDDNLVFGARPGDPNVAE-KLDADGLP 747
Query: 652 HVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRH 709
+G +++P +P+ S N +T T T+ K E VD + + + + L+KV I R
Sbjct: 748 FIGSILQPGDPFYSYMNLNTGETFTVYYKNKEVGIVDNIKLCSNDRGTGKLKKVCITLRV 807
Query: 710 PRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLES 769
PRNP +GDKF+SRHGQKG+ SQLWP DMPF GM PD++ NPH FPSRMTI ML+ES
Sbjct: 808 PRNPTVGDKFASRHGQKGILSQLWPVEDMPFT-ENGMVPDILFNPHGFPSRMTIGMLIES 866
Query: 770 VAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGV 829
+A K +LHG +ATPF S ++D+ L G+ L G+N+ G E +YSG+
Sbjct: 867 MAGKSAALHGVCYDATPFTFS-EEDSA--------LKYFGETLVSAGYNFFGTEKMYSGI 917
Query: 830 YGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERD 889
G EL +IF+G VYYQRLRHMVSDKFQVR+TG D VT QP FGEMERD
Sbjct: 918 SGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPIKGRNVEGGIRFGEMERD 977
Query: 890 SLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP-- 947
+LLAHG ++LLHDRL +CSD A VC+ CGSML+ +P PP
Sbjct: 978 ALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRP-----------PPSSVASN 1026
Query: 948 KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTL 986
++ C C ++ + +P+VFRY AE AAMNIK+ L
Sbjct: 1027 RRYSCLLCGRVDTIQVIPVPHVFRYFVAELAAMNIKLRL 1065
>J8Q0Z3_SACAR (tr|J8Q0Z3) DNA-directed RNA polymerase OS=Saccharomyces arboricola
(strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_3623 PE=3
SV=1
Length = 1203
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1040 (43%), Positives = 602/1040 (57%), Gaps = 114/1040 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF+ R Y+ + IR VR DQ+S + L+YL + F + EYL+PV
Sbjct: 215 MAIIRPSFANRGASYSHYGIQIRSVRPDQTSQSNVLHYLNDGQVTFRFSWRKNEYLVPVV 274
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD----DRARMIIE--EVRQLSL 114
++LKAL TSD EI G +G D DR +++ + R L
Sbjct: 275 MILKALCHTSDREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPQL 320
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
R Q L Y+G+ F+ + + S V + VL V VHL D N DKF +++FM++K
Sbjct: 321 QNRTQVLQYLGDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGNQDKFRMMLFMIRK 380
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEI 232
L+SLV G DNPD+ Q+QEVLL G L + LKEK++++LQ+ ++ R T +
Sbjct: 381 LYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKEKIDEYLQNIIAQV-RMDITRGMAIN 439
Query: 233 FVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSH 289
F K+ + R I + ++ L TG LV+ +GLDLQQ +GYTV A+++N+ RF+SH
Sbjct: 440 FKDKRYMSRVLMRVNENIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISH 499
Query: 290 FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQG 349
FR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH CRI++ Q
Sbjct: 500 FRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHFAHKCRIST---QQS 556
Query: 350 SIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
+ I IL G+ P + V +DG ++G + + I
Sbjct: 557 DVS-------KIPSILYSLGVAP--ASHTFAAGPSLCCVQIDGKVIGWVSHEQGMIIADT 607
Query: 410 IRELKVSS-SAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNID 468
+R KV + +P DLE+GYVP S G YPGLYLF SR +RPVR + L E D
Sbjct: 608 LRYWKVEGKTPGLPVDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRYLP-LDKE----D 662
Query: 469 LIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQ 528
++GPFEQV+M I + TH E PT +LS++AN TP+SD NQSPRNMYQ
Sbjct: 663 IVGPFEQVYMNIAVTPQ----EIQNNVHTHVEFTPTNILSILANLTPFSDFNQSPRNMYQ 718
Query: 529 CQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAY 588
CQM KQTM + HR+D KLY LQT QTPIV+ + Y Y +D +P G NA+VAV++Y
Sbjct: 719 CQMGKQTMGTPGVALCHRSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAVISY 778
Query: 589 TGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-----S 643
TGYDM+DAMI+NKS+ ERG +G +Y+TE VDL SR DP ++ F N E
Sbjct: 779 TGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALNRSRGDPITQHFGFGNDEWPKEWLE 838
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNK-KDL 700
KLD DGLP++G + +P C+ ++ + + T SEP Y++ V + D NK ++L
Sbjct: 839 KLDEDGLPYIGTYVEEGDPICAYFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQEL 898
Query: 701 QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSR 760
Q V+I++R R P IGDKFSSRHGQKGVCS+ WP +DMPF TG++PD+IINPHAFPSR
Sbjct: 899 QTVSIKYRIRRLPQIGDKFSSRHGQKGVCSRKWPTIDMPFS-ETGIQPDIIINPHAFPSR 957
Query: 761 MTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYH 820
MTI M +ES+A K G+LHG ++TP+ S +D+ + D G L + G+NYH
Sbjct: 958 MTIGMFVESLAGKAGALHGIAQDSTPWIFS--EDDTPA-------DYFGDQLAKAGYNYH 1008
Query: 821 GLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 880
G E +YSG G+EL +I++G VYYQRLRHMV+DKFQVRSTG V+ +T QP
Sbjct: 1009 GNEPMYSGATGEELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKRHGG 1068
Query: 881 XXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGG 940
GEMERD+L+ HG ++LL DRL SDY A VC CGS+L T Q +PR IG
Sbjct: 1069 IRVGEMERDALIGHGTSFLLQDRLLNSSDYTQASVCRECGSILTTQ----QSVPR--IGS 1122
Query: 941 LPPRKAPKKVICHAC-------------------------------QTSK---GME--TV 964
+ V C C Q +K G E TV
Sbjct: 1123 I------STVCCRRCSMRFEDAKKLLTKSEDGESIYIDDSQIWEDGQGNKFVGGNETTTV 1176
Query: 965 AMPYVFRYLAAEFAAMNIKM 984
A+P+V +YL +E +AM I++
Sbjct: 1177 AIPFVLKYLDSELSAMGIRL 1196
>F0X9F9_GROCL (tr|F0X9F9) DNA-directed RNA polymerase OS=Grosmannia clavigera
(strain kw1407 / UAMH 11150) GN=CMQ_3277 PE=3 SV=1
Length = 1290
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/989 (43%), Positives = 578/989 (58%), Gaps = 85/989 (8%)
Query: 5 RNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIVLK 64
R SF R YT ++ R VR D++S T L+YL++ + F + E+L+PV ++LK
Sbjct: 227 RPSFQNRGAAYTPYGIITRSVRPDETSQTNVLHYLKDGNITFRFSWRKNEFLIPVMMILK 286
Query: 65 ALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQCLNYI 124
AL++T+D EI + N K GA T + DR +++ L+++ Y+
Sbjct: 287 ALVETNDREIFEAIVGPANSK-----GAENTY-LTDRVELLLRTYEFYGLYSKSATRAYL 340
Query: 125 GEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKLFSLV 177
GE F+ +L S V L+ V VHL + + DKF +LIFM++KL++LV
Sbjct: 341 GEKFRVVLGVPTTMSNYDVGTEFLRKIVLVHLGNMDVTEAQDADKFRMLIFMIRKLYALV 400
Query: 178 DGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFDFSEI 232
G +DNPD++QNQEVLL G L LKEKL+++L +D +R +E
Sbjct: 401 AGDCAVDNPDAVQNQEVLLGGFLYGQILKEKLDEFLSVSLRGALRDYWRRYPTNTMTTEA 460
Query: 233 FV--VKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHF 290
F + + I ++E L TG L++ +GLDLQQ +G+TV A++LN+LRFLSHF
Sbjct: 461 FARDFQAAVFRRSNENIGNALEYFLSTGNLISASGLDLQQVSGFTVVAEKLNFLRFLSHF 520
Query: 291 RAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGS 350
R +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ CRI
Sbjct: 521 RMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRI--------- 571
Query: 351 IKDYFKIKISILDILVDSGMTQL-VPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAH 409
I +I VD+ +T+L L E + V+LDG +VG E ++I
Sbjct: 572 ------ITGTIDASAVDAIVTELGAVSLSSASTEESVVVMLDGRVVGWCSPKEAKRIADT 625
Query: 410 IRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDL 469
+R KV S IP +LE+GYVP S GG+YPG+Y+ ++PSR VRPV+ ++ L E D
Sbjct: 626 LRHWKVEGSHNIPAELEIGYVPQSNGGSYPGVYMASAPSRMVRPVKYLA-LDKE----DF 680
Query: 470 IGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQC 529
+GP EQ +M I + S TH E+ PT MLS++AN TP+SD NQSPRNMYQC
Sbjct: 681 VGPQEQPYMSIAVREQ----EVISGQTTHVELDPTNMLSILANMTPFSDFNQSPRNMYQC 736
Query: 530 QMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYT 589
QM KQTM + HR D K Y LQT QTPIVR + Y D +P GTN +VAV++YT
Sbjct: 737 QMGKQTMGTPGTALAHRTDNKTYRLQTGQTPIVRAPLHNAYGFDNFPNGTNVVVAVISYT 796
Query: 590 GYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPS---SRMFR------KSNI 640
GYDM+DAMI+NKS+ ERG HG +Y+T+ + L + SR+ + +MF S
Sbjct: 797 GYDMDDAMIINKSAHERGFGHGSVYKTKKITLKDD-SRTRSAKHVGKMFGFAPGAFVSGQ 855
Query: 641 EKSKLDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKKKGSEPVYVDYV 690
+ LD DGLP++G ++ +P + + S TH K K E YV+ V
Sbjct: 856 VRGLLDDDGLPYIGMRVKMGDPLVAWHTVSADYDGTLVNRDGQTHYEKYKDGEDAYVEEV 915
Query: 691 AV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRP 748
+ + + LQ ++++ R PR+P IGDKFSSRHGQKGVCSQ WP VDMPF +G++P
Sbjct: 916 RLIGNENGNELLQTISVKLRIPRSPTIGDKFSSRHGQKGVCSQKWPTVDMPFT-ESGLQP 974
Query: 749 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDL 808
++IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ +DN D
Sbjct: 975 EVIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDSTPFQ--FDEDNTAG-------DYF 1025
Query: 809 GQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVT 868
G L + GFNYHG E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQVR+TG V T
Sbjct: 1026 GHQLMKAGFNYHGNEPMYSGITGEELEADIYIGVVYYQRLRHMVNDKFQVRTTGPVVPTT 1085
Query: 869 RQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFI 928
QP GEMERD+LLAHG A+LL DRL CSDY +C CGS L+ +
Sbjct: 1086 GQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSRTWICRQCGSFLS---V 1142
Query: 929 QPQKLPRREIGGLPPRKAPKKVICHACQT 957
QP P + RK V C C T
Sbjct: 1143 QPTVSPF-----IGKRKGVNAVRCRRCAT 1166
>F1NLV9_CHICK (tr|F1NLV9) DNA-directed RNA polymerase OS=Gallus gallus GN=Gga.56030
PE=3 SV=2
Length = 1117
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/1000 (41%), Positives = 578/1000 (57%), Gaps = 69/1000 (6%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R+ + R G+T+ VV+ CV+ + S++ + L+YL N + F + + LP+G
Sbjct: 173 LAMTRHKWKNRGPGFTEYGVVMHCVKDEHSAINMNLHYLENGCVMVNFIFQKELFFLPLG 232
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL++ +D +I L +K V + R + E +T+
Sbjct: 233 FALKALVNFTDYQIFEELVK------DKKNDTFYVNCVTEMLRAVAEA----GCYTQQNV 282
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ L + S + A + + +HL D +KF LL M +KL + G
Sbjct: 283 LEYLGKSFRVKLNLPEWYSNEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKLCAFAKGE 342
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ DNPDSL NQEVL G L ++LKE+LE+WLQS K +++++ D + + K F
Sbjct: 343 CMEDNPDSLMNQEVLTAGQLFLMFLKERLENWLQSVKFVLEKRTEKADININADSLMKAF 402
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
+ T ++ S E +L TG L + TGL + Q +G V D+LN++R+LSHFR +HRG++F
Sbjct: 403 NMT--TDVTKSFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAF 460
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVRKLLPESWGFLCPV TPDGEPCGL+NHMT C I + +
Sbjct: 461 AQMRTTTVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEM-------------V 507
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSS 417
+ D+ +VP P P E VLLDG +VG + ++ +R K++
Sbjct: 508 PVTDLPPLLCALGVVPIDATPSRPYAECYRVLLDGAVVGWVEWDLAPQVAEALRRFKITQ 567
Query: 418 SAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQV 476
P EV +P++ + YPGL++FT+P R VRPV+N+ E IG EQV
Sbjct: 568 EKRFPSRAEVVLIPMTGKPSLYPGLFIFTTPCRMVRPVKNLLYGRKE-----WIGTLEQV 622
Query: 477 FMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQ 534
FM + + P TH+E+ P +LSVVAN P+SDHNQSPRNMYQCQM KQ
Sbjct: 623 FMNVATME------SDVMPGVTTHQELFPHSILSVVANLIPFSDHNQSPRNMYQCQMGKQ 676
Query: 535 TMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDME 594
TM F + R+D KLY L TPQ+P+VR Y Y +D YP GTN++VAV++Y+GYDME
Sbjct: 677 TMGFPVYNYKDRSDNKLYLLHTPQSPLVRPRMYDYYGMDSYPVGTNSVVAVISYSGYDME 736
Query: 595 DAMILNKSSVERGMFHGQIYQTETVDLTEQGSR-SDPSSRMFRKSNIE-KSKLDSDGLPH 652
DAMI+NKSS ERG +G + + E++DL+ + +R D R + K KLD+DGLP
Sbjct: 737 DAMIVNKSSWERGFAYGSVIKMESIDLSLKANRGGDNLVFGIRPGDPNVKEKLDADGLPF 796
Query: 653 VGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHP 710
VG +++P +P+ S N +T T T+ + E VD + + + + +K I R P
Sbjct: 797 VGSILQPGDPFYSYMNLNTGETFTVYYQNKEVGIVDNIKLCSNDRGTGKFKKACITVRVP 856
Query: 711 RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESV 770
RNP +GDKF+SRHGQKG+ SQLWP DMPF GM PD++ NPH FPSRMTI ML+ES+
Sbjct: 857 RNPTVGDKFASRHGQKGILSQLWPVEDMPFT-ENGMVPDILFNPHGFPSRMTIGMLIESM 915
Query: 771 AAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVY 830
A K +LHG + +ATPF + K L G+ L G+N+ G E +YSG+
Sbjct: 916 AGKSAALHGAYYDATPFTFTEKNS---------ALKYFGETLVSAGYNFFGTEKMYSGIS 966
Query: 831 GKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDS 890
G EL +IF+G VYYQRLRHMVSDKFQVR+TG D VT QP FGEMERD+
Sbjct: 967 GVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPIKGRNVEGGIRFGEMERDA 1026
Query: 891 LLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRK--APK 948
LLAHG ++LLHDRL +CSD A VC+ CGSML+ +P PP + +
Sbjct: 1027 LLAHGTSFLLHDRLFSCSDGCEAYVCTSCGSMLSPLLQRP-----------PPSSVASSR 1075
Query: 949 KVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ C C ++ + +P+VFRY AE AAMNIK+ L L
Sbjct: 1076 RYSCMLCGRMDTIQIIPVPHVFRYFLAELAAMNIKLRLTL 1115
>M7U3X5_BOTFU (tr|M7U3X5) Putative dna-directed rna polymerase i subunit rpa2
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_10161
PE=4 SV=1
Length = 1207
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/1052 (41%), Positives = 611/1052 (58%), Gaps = 115/1052 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT+ ++IR VR DQ+S T L+YL + + F + E+L+P
Sbjct: 209 MAIIRPSFKGRGPTYTEFGMLIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPAM 268
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L K GA T + DR +++ + L+T+ +
Sbjct: 269 MILKALVETNDKEIFEGLVGAAGSK-----GAENT-FLTDRVELLLRTYKAYGLYTKSKT 322
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+ +L S V L+ V VHL + + DKF +L+FM +KL
Sbjct: 323 RAYLGEKFRIVLGVPDTMSNYDVGTEFLRKIVLVHLGNTDVTEAQDKDKFKMLLFMTRKL 382
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKS---- 224
+SLV G DNPD++QNQE+LL G L + +KE+LEDWL + +D ++R
Sbjct: 383 YSLVAGDCAGDNPDAVQNQEILLGGFLFGMIIKERLEDWLHTSLRMALRDYVRRSPENNF 442
Query: 225 GTFDFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
T +F + F VK C + ++E + TG LV+ TGLDLQQ +G+TV A+++N+L
Sbjct: 443 ATPEFLKDFPVKIC--SRTNEQVGGALEYFMSTGNLVSPTGLDLQQTSGFTVVAEKINFL 500
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF++HFR +HRG+ FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH++ C I ++
Sbjct: 501 RFIAHFRMIHRGSFFAQLKTTTVRKLLPESWGFMCPVHTPDGSPCGLLNHLSHKCIILTH 560
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
++ +S L + V +G + E + V LDG I+G +
Sbjct: 561 ASDVSALPKL----LSELGV-VSTGSSST---------DESVVVQLDGKIMGWCSPKQSL 606
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
I +R KV + +P +LE+GY+P S GG YPG+YL +P+R VRPV+ + L E
Sbjct: 607 VIADTLRYWKVEKTHGVPTNLEIGYIPNSHGGQYPGIYLSAAPARMVRPVKYLP-LDKE- 664
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
D +GP EQ FM I + S TH E PT +LS++AN TP+SD NQSPR
Sbjct: 665 ---DFVGPLEQPFMSIAVTEQ----EIESGEHTHVEFDPTHILSILANMTPFSDFNQSPR 717
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQ+M I++R D K Y LQT QTPIVR + +Y D +P G N++VA
Sbjct: 718 NMYQCQMGKQSMGTPGTAIRYRTDNKAYRLQTGQTPIVRAPLHNEYGFDNFPNGMNSVVA 777
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-----FRKSN 639
V++YTGYDM+DAMI+NKS+ ERG HG IY+T+ +L E+G +S + + F
Sbjct: 778 VISYTGYDMDDAMIINKSAHERGFGHGTIYKTKKYEL-EEGHKSRSAKNIKKLFGFAPGG 836
Query: 640 IEKSK----LDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKKKGSEPV 685
+ K++ +D DGLP +G+M++ + + + S TH K K +E
Sbjct: 837 LVKAEWKAAIDEDGLPFIGRMVQNGDLIAAWHTVSMDENGKYVNRDGQTHFEKYKETEIA 896
Query: 686 YVDYVAVDVKNKKDL---QKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+++ V + + N+ + Q ++++ R PR+PVIGDKFSSRHGQKGVCSQ WP VDMPF
Sbjct: 897 FIEEVRL-IGNENGIEPCQAISVKLRIPRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFT- 954
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+G++PD IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ E K+G
Sbjct: 955 ESGIQPDTIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFD------EEHKAG 1008
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
D G L + G+NY+G E +YSG+ G+EL +I+IG VYYQRLRHMV+DK+QVR+TG
Sbjct: 1009 ---DYFGHQLMKAGYNYYGNEPMYSGITGEELHADIYIGVVYYQRLRHMVNDKYQVRTTG 1065
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V Q+T QP GEMERDSLLAHG A+LL DRL CSDY + +C CG+
Sbjct: 1066 PVTQLTGQPIKGRKKGGGIRVGEMERDSLLAHGTAFLLQDRLLNCSDYTKSWICKECGTF 1125
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKKVI-CHACQTS--------------KGME----- 962
L+T QP + +K V+ C C TS KG
Sbjct: 1126 LST---QPT------VSAFASKKKGTGVVRCRKCATSASGKLGGGEVWEDGKGQRWVGGE 1176
Query: 963 ---TVAMPYVFRYLAAEFAAMNIKMTLKLNNG 991
VA+P V +YL E AAM IK LK N G
Sbjct: 1177 DTTVVAVPGVLKYLDVELAAMGIK--LKYNVG 1206
>J9N263_FUSO4 (tr|J9N263) DNA-directed RNA polymerase OS=Fusarium oxysporum f. sp.
lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL
34936) GN=FOXG_09260 PE=3 SV=1
Length = 1232
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/1063 (41%), Positives = 613/1063 (57%), Gaps = 128/1063 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R GYT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 MAINRPSFQNRGPGYTPYGIILRAVRPDETSQTNVLHYLSDGNMTFRFSWRKNEYLVPVM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDD-----RARMIIEEVRQLSLF 115
++LKAL++T+D EI +E G G++ ++ R +++ + +L+
Sbjct: 266 MILKALVETNDREI-----------FEGLVGPAGSKSTENTFLTHRIELLLRTYKSYNLY 314
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIF 168
++ Y+GE F+ +L + V L+ V VHL + + +KF LL+F
Sbjct: 315 SKSDTRAYLGEKFRVVLGVPDTMTNLEVGTEFLRRIVLVHLGNVDVTEEQDKEKFKLLLF 374
Query: 169 MLQKLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQ-----SGKDEMKRK 223
M++KL++LV G +DNPD++QNQE+LL G L LKE+L+++L S +D ++R
Sbjct: 375 MIRKLYALVAGDCAVDNPDAVQNQEILLGGFLYGQILKERLDEFLSVNVRASLRDYLRRN 434
Query: 224 SGTFDFSEIFVVKKCFDKTPARA----ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQAD 279
G SE F +K F R + ++E L TG L + +GLDLQQ AG+TV A+
Sbjct: 435 PGVAFTSEDF--RKEFPNNIFRKANENLGNALEYFLSTGNLQSASGLDLQQTAGFTVVAE 492
Query: 280 RLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTC 339
+LN+LRF+SHFR VHRGA FA L+TT VRKLLPESWGF+CPVHTPDG PCGLLNH+ C
Sbjct: 493 KLNFLRFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGAPCGLLNHLAHKC 552
Query: 340 RITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIP 399
+IT+ + I + ++ I+D V S T+ E + V+LDG I+G
Sbjct: 553 KITTDYVDVSHIASLAQ-ELGIVD--VSSASTE-----------ENVVVMLDGKILGFCT 598
Query: 400 SGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISI 459
E +I R KV + +P LE+GYVP S GG+YPG+Y+ ++P+R VRPV+ + +
Sbjct: 599 PKESVRIADCFRYWKVEGTHGVPLQLEIGYVPPSRGGSYPGIYMTSTPARMVRPVKYLPL 658
Query: 460 LSNENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSD 518
+ D +GP+EQ +M I P + G+ +TH E PT MLS++AN TP+SD
Sbjct: 659 -----QKEDWVGPYEQPYMSIAVVPQEVESGK-----STHVEFDPTNMLSILANMTPFSD 708
Query: 519 HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTG 578
NQSPRNMYQCQM KQTM I++R D K Y +QT QTPIVR + Y D +P G
Sbjct: 709 FNQSPRNMYQCQMGKQTMGTPGAAIRYRTDNKSYRIQTGQTPIVRAPLHNTYGFDNFPNG 768
Query: 579 TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK- 637
NA+VAV++YTGYDM+DAMILNKS+ ERG HG IY+T+ + L + SR+ + + +
Sbjct: 769 MNAVVAVISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKISLKDD-SRTKATKSVTKAF 827
Query: 638 --------SNIEKSKLDSDGLPHVGQMIRPDEPYCSI------YNASTSS----THTLKK 679
S + LD DGLPHVG++I+ + C+ YN + TH K
Sbjct: 828 GFAPHSYVSAQYQGMLDDDGLPHVGRLIQEGDVICAWHTVTPDYNGKLVNLDGITHYEKY 887
Query: 680 KGSEPVYVDYV---AVDVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDV 736
K SE +V+ V D N+ LQ ++++FR PR+P+IGDKFSSRHGQKGV SQ WP +
Sbjct: 888 KDSENGFVEEVRLIGADSGNEP-LQTISVKFRIPRSPIIGDKFSSRHGQKGVASQKWPTM 946
Query: 737 DMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNG 796
D+PF TG+ PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ + G
Sbjct: 947 DLPFS-ETGISPDIIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEENTAG 1005
Query: 797 ESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKF 856
D G L + G+NYHG E +YSG+ G+EL +I+IG VYYQRLRHMV+DK+
Sbjct: 1006 ---------DYFGHQLMKAGYNYHGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKY 1056
Query: 857 QVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVC 916
QVR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY + +C
Sbjct: 1057 QVRTTGPVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSKSWIC 1116
Query: 917 SLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT----SKGME---------- 962
CGS L+ Q P + +KA V C AC ++G++
Sbjct: 1117 RRCGSFLSVQPTVSQFAPGK-------KKAASIVRCRACAVKLDDAEGIDLTEIQGEIWE 1169
Query: 963 --------------TVAMPYVFRYLAAEFAAMNIKMTLKLNNG 991
V +P ++L E AAM +K+ +++ G
Sbjct: 1170 DGHGNSWVGGDHTTQVVVPGALKFLDVELAAMGVKLKYRVDRG 1212
>H1UXI4_COLHI (tr|H1UXI4) DNA-directed RNA polymerase OS=Colletotrichum
higginsianum (strain IMI 349063) GN=CH063_00849 PE=3 SV=1
Length = 1225
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1056 (41%), Positives = 604/1056 (57%), Gaps = 117/1056 (11%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R +GYT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 205 MAINRPSFQNRGQGYTPYGIILRSVRPDETSQTNVLHYLSDGNMTFRFSWRKNEYLVPVM 264
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L K K + DR +++ + L+++ +
Sbjct: 265 MILKALVETNDREIFEGLIGLSGSKSAK------NTFLTDRVELLLRTYKSYGLYSKTET 318
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--------DDNFDKFNLLIFMLQK 172
Y+GE F+ +L S V L+ V VHL +DN DKF +L+FM++K
Sbjct: 319 RAYLGEKFRVVLGVPDTMSNYDVGTEFLRKIVLVHLGNINVTEKEDN-DKFRMLLFMIRK 377
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD----EMKRKSGTFD 228
L++LV G +DNPD++QNQEVLL G L + LKE+LE++L + E RK
Sbjct: 378 LYALVAGDCSVDNPDAVQNQEVLLGGFLYGMILKERLEEFLTTAVRLSLREWTRKHPATP 437
Query: 229 FSEIFVVKKC---FDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLR 285
F+ K+ + I +E L TG L + +GLDLQQ AG+TV A++LN+LR
Sbjct: 438 FTSQDFAKEFPANIFRHANENIGNGLEYFLSTGNLTSPSGLDLQQTAGFTVVAEKLNFLR 497
Query: 286 FLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRI-TSY 344
FLSHFR +HRGA FA L+TTTVRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I T
Sbjct: 498 FLSHFRMIHRGAFFAELKTTTVRKLLPESWGFMCPVHTPDGSPCGLLNHLAHKCKIMTEA 557
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
D+ I ++ + G + E + V+LDG IVG E
Sbjct: 558 VDAS-----------KIPGLVAELGAVETSSA----ATDESVVVMLDGRIVGFCTPRESL 602
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
+I +R KV + +P LEVGYVP S GG+YPG+YL ++P+R VRPV+ + +
Sbjct: 603 RIADTLRYWKVEGTHGVPLQLEVGYVPPSNGGSYPGIYLASAPARMVRPVKYLPL----- 657
Query: 465 KNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
D +GP EQ +M I + S +TH E+ PT MLS++AN TP+SD NQSPR
Sbjct: 658 DKEDFVGPHEQPYMSIAVVEN----EIVSGESTHVEVTPTNMLSILANMTPFSDFNQSPR 713
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM KQTM + +++R D K+Y LQ+ QTP+VR+ + Y D +P G NA+VA
Sbjct: 714 NMYQCQMGKQTMGTPATALRYRTDNKMYRLQSGQTPVVRSPLHNTYGFDNFPNGFNAVVA 773
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEK-- 642
V++YTGYDM+DAMILNKS+ ERG HG IY+T+ + L ++ SR NI K
Sbjct: 774 VISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKITLKDE-------SRTRAVKNISKLF 826
Query: 643 -------------SKLDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKK 679
+LD DGLP+VG++++ + C+ + S TH K
Sbjct: 827 GFAPGGFVKGHYRGQLDEDGLPYVGRLVQEGDVLCAWHTVSADYSGKLINLDGQTHYEKY 886
Query: 680 KGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVD 737
K SE +V+ V V + Q ++I+ R PR+PVIGDKFSSRHGQKGV SQ WP VD
Sbjct: 887 KESETAFVEEVRVIGSETGNEPAQTISIKLRVPRSPVIGDKFSSRHGQKGVASQKWPAVD 946
Query: 738 MPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGE 797
MPF +GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF K N E
Sbjct: 947 MPFS-ESGMQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPF-----KFNEE 1000
Query: 798 SEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQ 857
+ + D G L + G+NYHG E +YSG+ G+EL +I++G VYYQRLRHMV+DK+Q
Sbjct: 1001 NTAA----DYFGHQLMKAGYNYHGNEPMYSGITGEELAADIYVGVVYYQRLRHMVNDKYQ 1056
Query: 858 VRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 917
VR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY + +C
Sbjct: 1057 VRTTGPVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTRSWICR 1116
Query: 918 LCGSMLATSFIQPQKLP----RREIGGLPPRKAPKKVICHACQTSKGME----------- 962
CGS L+ +QP P ++++ + R ++ +++ +E
Sbjct: 1117 TCGSFLS---VQPTVSPFVGKKKQVTTVRCRNCATQLDAGDAESAAKVEGEIWEDGQGNQ 1173
Query: 963 --------TVAMPYVFRYLAAEFAAMNIKMTLKLNN 990
V +P ++L E AAM +K+ ++++
Sbjct: 1174 WVGGENTTLVVVPGALKFLDVELAAMGVKLKYRIDS 1209
>K9G6V4_PEND1 (tr|K9G6V4) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain Pd1 / CECT 20795) GN=PDIP_32590 PE=3 SV=1
Length = 1268
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/983 (42%), Positives = 581/983 (59%), Gaps = 100/983 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS +R SF +R + YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MSIIRGSFVKRGQTYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL +T+D EI + + K + V DR +++ ++ C
Sbjct: 276 MILKALAETNDREIFEAIVGGASSK------GMKNTFVTDRVELLLRTYHAYQKHSQYDC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
+++G+ F+P+L + + V L+ V HL + ++DKF L+ FM++KL
Sbjct: 330 RSHLGKAFRPVLGVPADMPDEEVGTEFLRKVVLPHLGNENVTEAQDWDKFKLITFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDF 229
+S V G DNPD++ NQE+LL G L + LKE++E+WL+S +D R +G F
Sbjct: 390 YSTVAGDCAPDNPDAVSNQEILLGGFLYGMILKERIEEWLRSFGPIARDWSIRNNGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDEAFERDFLSKIVKRSNENIGNALEYFLSTGNLVSPTGLDLQQTSGYTVIAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I++
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCFIST--- 565
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
D ++ +++ + V S + + E + V LDG I+G + ++I
Sbjct: 566 ---DNLDVSQLPRTLVQLGVRSESSVALD--------ESVVVQLDGRIIGYCSPKQAQRI 614
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
IR KV IP +LE+GY+P S GG YPG+Y+F+ +R RPV+ +++
Sbjct: 615 ADTIRYWKVEGKNNIPRELEIGYIPNSSGGQYPGVYMFSQSARMYRPVKYLAL-----DK 669
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C + P +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 670 LDYVGPFEQPFMEIACVE------SDLIPGLSTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM +I HR D KLY +QT QTPIVR Y Y +D +P G NA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTSIAHRTDNKLYRIQTGQTPIVRPPLYNAYGLDNFPNGMNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKS+ ERG HG +Y+T+ V L + SR S R K
Sbjct: 784 IISYTGYDMDDAMIINKSAHERGFGHGTVYKTKVVTLADNDSRRTKSKREVTKLFGFAPG 843
Query: 638 ---SNIEKSKLDSDGLPHVGQMIRPDEPYCSIYN-----ASTS------STHTLKKKGSE 683
++ +D DG+PH+G ++ + + +N AS S TH +K K +E
Sbjct: 844 DEVKEQVRNIIDEDGMPHLGARVKEGDKIAAWHNVRFDPASDSYVNVDGVTHYMKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
YVD + + + Q ++I++R PR PVIGDKFSSRHGQKGV SQLWP VDMPF
Sbjct: 904 EGYVDSIRLMGSESGNEPAQSLSIKYRIPRKPVIGDKFSSRHGQKGVLSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSR-------------------MTIAMLLESVAAKGGSLHGEFV 782
+GM+PDLIINPHAFPSR MTIA ++ES+A K G++HG
Sbjct: 964 -ESGMQPDLIINPHAFPSRKAPLLLRSKKTHSSNAFPGMTIAQMIESMAGKAGAMHGLPQ 1022
Query: 783 NATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGP 842
++TPF+ S + D G+ LR+ G+NY+G E LYSG+ G+E + +I++G
Sbjct: 1023 DSTPFQFS---------EENTATDYFGEQLRKAGYNYYGNEPLYSGITGREFSADIYMGL 1073
Query: 843 VYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHD 902
VYYQRLRHMV+DKFQVR+TG V+ +T QP GEMERDSL+AHGAA+LL D
Sbjct: 1074 VYYQRLRHMVNDKFQVRTTGPVNALTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFLLQD 1133
Query: 903 RLHTCSDYHIADVCSLCGSMLAT 925
RL CSD +C CGS L+T
Sbjct: 1134 RLMNCSDAQHTWICRSCGSFLST 1156
>K9F9Z4_PEND2 (tr|K9F9Z4) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain PHI26 / CECT 20796) GN=PDIG_86580 PE=3 SV=1
Length = 1268
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/983 (42%), Positives = 581/983 (59%), Gaps = 100/983 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
MS +R SF +R + YT V IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 216 MSIIRGSFVKRGQTYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVM 275
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL +T+D EI + + K + V DR +++ ++ C
Sbjct: 276 MILKALAETNDREIFEAIVGGASSK------GMKNTFVTDRVELLLRTYHAYQKHSQYDC 329
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
+++G+ F+P+L + + V L+ V HL + ++DKF L+ FM++KL
Sbjct: 330 RSHLGKAFRPVLGVPADMPDEEVGTEFLRKVVLPHLGNENVTEAQDWDKFKLITFMIRKL 389
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMKRKSGTFDF 229
+S V G DNPD++ NQE+LL G L + LKE++E+WL+S +D R +G F
Sbjct: 390 YSTVAGDCAPDNPDAVSNQEILLGGFLYGMILKERIEEWLRSFGPIARDWSIRNNGA-KF 448
Query: 230 SEIFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
++ + K R+ I ++E L TG LV+ TGLDLQQ +GYTV A+++N+ RF
Sbjct: 449 TDEAFERDFLSKIVKRSNENIGNALEYFLSTGNLVSPTGLDLQQTSGYTVIAEKINFYRF 508
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR +HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ C I++
Sbjct: 509 ISHFRMIHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCFIST--- 565
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
D ++ +++ + V S + + E + V LDG I+G + ++I
Sbjct: 566 ---DNLDVSQLPRTLVQLGVRSESSVALD--------ESVVVQLDGRIIGYCSPKQAQRI 614
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
IR KV IP +LE+GY+P S GG YPG+Y+F+ +R RPV+ +++
Sbjct: 615 ADTIRYWKVEGKNNIPRELEIGYIPNSSGGQYPGVYMFSQSARMYRPVKYLAL-----DK 669
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVVANRTPWSDHNQSPR 524
+D +GPFEQ FMEI C + P +TH E PT +LS+VAN TP+SD+NQSPR
Sbjct: 670 LDYVGPFEQPFMEIACVE------SDLIPGLSTHIEFTPTNILSIVANMTPFSDYNQSPR 723
Query: 525 NMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVA 584
NMYQCQM+KQTM +I HR D KLY +QT QTPIVR Y Y +D +P G NA+VA
Sbjct: 724 NMYQCQMSKQTMGTPGTSIAHRTDNKLYRIQTGQTPIVRPPLYNAYGLDNFPNGMNAVVA 783
Query: 585 VLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------- 637
+++YTGYDM+DAMI+NKS+ ERG HG +Y+T+ V L + SR S R K
Sbjct: 784 IISYTGYDMDDAMIINKSAHERGFGHGTVYKTKVVTLADNDSRRTKSKREVTKLFGFAPG 843
Query: 638 ---SNIEKSKLDSDGLPHVGQMIRPDEPYCSIYN-----ASTS------STHTLKKKGSE 683
++ +D DG+PH+G ++ + + +N AS S TH +K K +E
Sbjct: 844 DEVKEQVRNIIDEDGMPHLGARVKEGDKIAAWHNVRFDPASDSYVNVDGVTHYMKYKDAE 903
Query: 684 PVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFC 741
YVD + + + Q ++I++R PR PVIGDKFSSRHGQKGV SQLWP VDMPF
Sbjct: 904 EGYVDSIRLMGSESGNEPAQSLSIKYRIPRKPVIGDKFSSRHGQKGVLSQLWPAVDMPFS 963
Query: 742 GTTGMRPDLIINPHAFPSR-------------------MTIAMLLESVAAKGGSLHGEFV 782
+GM+PDLIINPHAFPSR MTIA ++ES+A K G++HG
Sbjct: 964 -ESGMQPDLIINPHAFPSRKAPLLLRSKKTHSSNAFPGMTIAQMIESMAGKAGAMHGLPQ 1022
Query: 783 NATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGP 842
++TPF+ S + D G+ LR+ G+NY+G E LYSG+ G+E + +I++G
Sbjct: 1023 DSTPFQFS---------EENTATDYFGEQLRKAGYNYYGNEPLYSGITGREFSADIYMGL 1073
Query: 843 VYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHD 902
VYYQRLRHMV+DKFQVR+TG V+ +T QP GEMERDSL+AHGAA+LL D
Sbjct: 1074 VYYQRLRHMVNDKFQVRTTGPVNALTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFLLQD 1133
Query: 903 RLHTCSDYHIADVCSLCGSMLAT 925
RL CSD +C CGS L+T
Sbjct: 1134 RLMNCSDAQHTWICRSCGSFLST 1156
>E9ETK9_METAR (tr|E9ETK9) DNA-directed RNA polymerase OS=Metarhizium anisopliae
(strain ARSEF 23 / ATCC MYA-3075) GN=MAA_03358 PE=3 SV=1
Length = 1231
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/1057 (40%), Positives = 608/1057 (57%), Gaps = 116/1057 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R GYT V++R VR D++S T L+YL + + + EYL+PV
Sbjct: 206 MAINRPSFQSRGAGYTSYGVIVRSVRPDETSQTNVLHYLNDGNITFRISWRKNEYLIPVI 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L K + + DR +++ + L+++ Q
Sbjct: 266 MILKALVETNDREIFEGLIGPMGSKVTE------NTFLTDRVELLLRTYKSYGLYSKSQT 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIFMLQKL 173
Y+GE F+ +L + S V L+ V VHL + + DKF +L+FM++KL
Sbjct: 320 RAYLGEKFRVVLGVPETMSDYEVGTEFLRRIVLVHLGNVNVTEEQDLDKFRMLLFMVRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFD 228
++L G +DNPD+LQNQE+LL G L LKE+L+++L G +D ++R
Sbjct: 380 YALAAGECAVDNPDALQNQEILLGGFLYGQILKERLDEFLSVGVRSSLRDFLRRHPEVPF 439
Query: 229 FSEIFVVKKCFD----KTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
SE F +K F K + ++E L TG L + +GLDLQQ AG+TV A++LN+L
Sbjct: 440 TSEDF--RKEFPGAIFKKANENLGNALEYFLSTGNLQSPSGLDLQQTAGFTVVAEKLNFL 497
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF+SHFR VHRGA FA LRTT VRKLLPESWGF+CPVHTPDG PCGLLNH+ C+I +
Sbjct: 498 RFISHFRMVHRGAFFAQLRTTAVRKLLPESWGFMCPVHTPDGSPCGLLNHLAHKCKIVTD 557
Query: 345 FDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVE 404
+ K ++ ++D S +T + + V++DG I+G E
Sbjct: 558 HVDASKLPALVK-ELGVVD--TSSALTS-----------DNVVVMMDGKILGWCTPKESL 603
Query: 405 KIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNEN 464
+I +R KV + +P LE+GYVP+S GG+YPG+Y+ ++P+R VRPV+ + +
Sbjct: 604 RIADCLRYWKVEGTHGVPLQLEIGYVPVSNGGSYPGVYITSTPARMVRPVKYLPL----- 658
Query: 465 KNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+ D +GP+EQ +M I P + G +TH E PT MLS++AN TP+SD NQSP
Sbjct: 659 QKEDFVGPYEQPYMSIAVLPQEIESGV-----STHVEFDPTNMLSILANMTPFSDFNQSP 713
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM I++R D K Y +QT QTPIVR + Y D +P G NA+V
Sbjct: 714 RNMYQCQMGKQTMGTPGAAIRYRTDNKSYRIQTGQTPIVRAPLHNDYGFDNFPNGMNAVV 773
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK------ 637
AV++YTGYDM+DAMILNKS+ ERG HG IY+T+ + L + SR+ + + +
Sbjct: 774 AVISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKITLKDD-SRTRAAKSVTKAFGFAPH 832
Query: 638 ---SNIEKSKLDSDGLPHVGQMIRPDEPYCSI------YNASTSS----THTLKKKGSEP 684
S + LD DGLPHVG++++ + C+ YN + + TH K K E
Sbjct: 833 SYVSASYQGMLDDDGLPHVGRLVQEGDVICAWHTVTPDYNGNLVNLDGITHYEKYKDGET 892
Query: 685 VYVDYVAVDVKNK--KDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+V+ V + + + LQ V+I+FR PR+P+IGDKFSSRHGQKGV SQ WP +DMPF
Sbjct: 893 GFVEEVRLIGADTGGETLQTVSIKFRIPRSPIIGDKFSSRHGQKGVASQKWPAIDMPFS- 951
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+G++PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ ++
Sbjct: 952 ESGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFK---------FDEEN 1002
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
+D G L + G++YHG E +YSG+ G+EL +I+IG VYYQRLRHMV+DKFQVR+TG
Sbjct: 1003 TAVDYFGHQLMKAGYSYHGNEPMYSGITGEELGADIYIGVVYYQRLRHMVNDKFQVRTTG 1062
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V T QP GEMERD+LLAHG A+LL DRL CSDY + +C CGS
Sbjct: 1063 PVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKSWICRRCGSF 1122
Query: 923 LATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT----SKGME---------------- 962
L+ Q P + ++AP V C C T + G++
Sbjct: 1123 LSVQPTVSQFAPGK-------KRAPTTVRCRNCATRLDETDGVDLTEVQGEIWEDGQGNC 1175
Query: 963 --------TVAMPYVFRYLAAEFAAMNIKMTLKLNNG 991
V +P +YL E AAM +K+ +++ G
Sbjct: 1176 WVGGEHTTQVVVPGALKYLDVELAAMGVKLKYRVSKG 1212
>K1WSJ7_MARBU (tr|K1WSJ7) DNA-directed RNA polymerase OS=Marssonina brunnea f. sp.
multigermtubi (strain MB_m1) GN=MBM_01262 PE=3 SV=1
Length = 1209
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1059 (42%), Positives = 611/1059 (57%), Gaps = 128/1059 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R + YT +++R VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 210 MAIERPSFRNRGKEYTKYGMLMRSVRPDQTSQTNVLHYLNDGNVIFRFSWRKAEYLIPVM 269
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVD-----DRARMIIEEVRQLSLF 115
I+LKAL +T+D EI +E GA G++ + DR +++ + L
Sbjct: 270 ILLKALTETNDREI-----------FEGLVGAAGSEGANNSFLTDRVEVLLRTHKASGLH 318
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIF 168
T+ + Y+G F+P+L N S L+ V VHL + + DKF +L+F
Sbjct: 319 TKSKTRAYLGGLFRPVLGVPDNMSNYDCGTEFLRKIVLVHLGNVNVTHVQDSDKFKMLLF 378
Query: 169 MLQKLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDW----LQSGKDEMKRKS 224
M +KL++LV G +DNPD++Q+QE+LL G L + +KE+L+DW L+ + RKS
Sbjct: 379 MTRKLYALVAGDCAVDNPDAVQHQEILLGGFLYGMIIKERLDDWMTRQLRLAIRQYVRKS 438
Query: 225 -----GTFDFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQAD 279
T +F + F VK C KT + ++E L TG LV+ TGLDLQQ +G+TV A+
Sbjct: 439 PENNFTTPEFLKQFPVKLC-GKT-NENLGGALEYFLSTGNLVSPTGLDLQQVSGFTVVAE 496
Query: 280 RLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTC 339
++N+LRF+SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH++ C
Sbjct: 497 KINFLRFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKC 556
Query: 340 RITSYFDSQGSIKDYFKIKISILDI-LVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCI 398
RI + S D + ++++ +V +G E + V LDG I+G
Sbjct: 557 RILT------SASDVSALPALVVELGIVGAGSAST---------KEAVVVTLDGRILGWC 601
Query: 399 PSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNIS 458
+ I +R KV +P DLE+ +VP S GG YPG+Y+ +PSR VRPV+ +
Sbjct: 602 TPKQAIMIADTLRFWKVEGRRNVPKDLEICWVPNSHGGQYPGIYMSATPSRMVRPVKYLP 661
Query: 459 ILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSD 518
+ + DLIGP EQ FM I + S +TH E PT +LS++AN TP+SD
Sbjct: 662 LDAE-----DLIGPQEQPFMSIAVTEP----EIISGESTHVEFDPTNILSILANMTPFSD 712
Query: 519 HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTG 578
NQSPRNMYQCQMAKQ+M ++R+D K Y LQT QTPIVR + +Y D +P G
Sbjct: 713 FNQSPRNMYQCQMAKQSMGTPGTATRYRSDNKTYRLQTGQTPIVRAPLHNEYGFDNFPNG 772
Query: 579 TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTE-QGSRSD-------- 629
N++VAV++YTGYDM+DAMI+NK S ERG HG +Y+ + V++ E SRS
Sbjct: 773 MNSVVAVISYTGYDMDDAMIINKGSHERGFGHGTVYKVKKVNIREGNNSRSSKNVEKLFG 832
Query: 630 --PSSRMFRKSNIEKSKLDSDGLPHVGQMIRPDEPYCSIYNASTSS----------THTL 677
P S + K+ + K+ +D DGLP +G+++R + C+ + S + TH
Sbjct: 833 FAPGSEV--KARV-KAMIDEDGLPRIGRLVREGDMLCAWHTVSRDAEGKLVNKDGITHFE 889
Query: 678 KKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPD 735
K K E ++D V + + + LQ +I+FR PR+PV+GDKFSSRHGQKGV SQ WP
Sbjct: 890 KYKDGEMAFIDEVRLIGNENGAEPLQVCSIKFRIPRSPVVGDKFSSRHGQKGVVSQKWPS 949
Query: 736 VDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDN 795
VDMPF +GM+PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPFR +
Sbjct: 950 VDMPFT-ESGMQPDVIINPHAFPSRMTIGMFIESLAGKAGALHGLAQDSTPFRFDEENTA 1008
Query: 796 GESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDK 855
G D G L + G+NY+G E +YSG+ G+EL C+I+IG VYYQRLRHMV+DK
Sbjct: 1009 G---------DYFGHQLMKAGYNYYGNEPMYSGITGEELHCDIYIGLVYYQRLRHMVNDK 1059
Query: 856 FQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADV 915
FQVRSTG + +TRQP GEMERDSLLAHG A+LL DRL CSDY + +
Sbjct: 1060 FQVRSTGPITPLTRQPAKGRKKGGGIRVGEMERDSLLAHGTAFLLQDRLLNCSDYSRSWI 1119
Query: 916 CSLCGSMLATSFIQPQKLP-----RREIGGLPPRKAPKKVICHACQTSKG---------- 960
C CG+ ++ IQP R G + R+ H + S G
Sbjct: 1120 CKQCGTFMS---IQPTFWAFATNRLRGTGVVRCRRC-----AHRAEDSTGGAEIWEDAEG 1171
Query: 961 --------METVAMPYVFRYLAAEFAAMNIKMTLKLNNG 991
VA+P V +YL E AAM IK LK N G
Sbjct: 1172 QRWAGGEHTTIVAVPAVLKYLDVELAAMGIK--LKYNVG 1208
>B7FQD9_PHATC (tr|B7FQD9) DNA-directed RNA polymerase (Fragment) OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9235 PE=3
SV=1
Length = 1147
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/1019 (42%), Positives = 604/1019 (59%), Gaps = 73/1019 (7%)
Query: 5 RNSFSQRREGYTDKAVVIRCVR--ADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVGIV 62
R+S+ R YTD V +RC R D S++T ++YL A L F K +E+L+P ++
Sbjct: 166 RSSYKNRGNTYTDLGVAMRCARHNGDMSAITNTVHYLTTGGANLKFVAKKQEFLIPAILI 225
Query: 63 LKALIDTSDLEIRTNLKSCYNEKYEK-GKGAVGTQRVDDRARMIIEEVRQL--SLFTRLQ 119
L+AL S E +T L YE+ +G + RA +++++ R SL T +
Sbjct: 226 LRAL---SGSESQTEL-------YERIVQGDQSNTFLVARAGLLLQDARARFGSLNTPDE 275
Query: 120 CLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDG 179
CL +IG F+ + + + S + +++ +V +HL DK L+ ML+KL++ G
Sbjct: 276 CLAFIGTRFRRLSQKAETTSDVEIGHHIIRRFVLIHLPTYRDKLECLLLMLRKLYAFAAG 335
Query: 180 TSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGK--------DEMKRKSGTFDFSE 231
+DN DSLQNQE+LLPGHL+ ++KEK E++L S + + R S ++
Sbjct: 336 DCGVDNADSLQNQEILLPGHLMCTFIKEKFEEFLSSLRLALLSDLRKDFARTSAKLTDAK 395
Query: 232 IFVVKKCFDKTPARA---ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLS 288
+ K D+ +A I +++ L TG +V+ +GLDL Q +GYT+ A+RLN+LR+ +
Sbjct: 396 YW--GKMVDRHAGKASGGIGKKVQHFLSTGNIVSTSGLDLMQVSGYTIVAERLNFLRYCA 453
Query: 289 HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY---F 345
HFR+VHRG F ++TT VRKLLP+ WGFLCPVHTPDG PCGLL+H+ ++ +Y
Sbjct: 454 HFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKSKVMAYPSRL 513
Query: 346 DSQGSIKDYFKIK---ISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGE 402
D++G I + ++ +G ++ L L V +DG IVG
Sbjct: 514 DAKGMIDLDDLLLSLGVTPCGAGSRNGDGRIGSTHLH------LPVSIDGRIVGGASPSV 567
Query: 403 VEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILS 461
++ I AH+R+LKV + ++P LEVG VP GA YPGLYLFT +R VRPV L+
Sbjct: 568 LKIIAAHLRKLKVDNPPVVPPTLEVGLVPPGNPGAPYPGLYLFTCAARLVRPV-----LN 622
Query: 462 NENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQ 521
+ + + IGP EQ +M+I C D + R+ TH+E+ PT MLS++AN TP+SD NQ
Sbjct: 623 RASGHTEFIGPLEQGYMDIACLD--EDIREGI--TTHQELDPTNMLSLIANLTPFSDQNQ 678
Query: 522 SPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA 581
SPRNMYQCQM KQTM + ++ +R D KLY LQTPQ P+V+TS + +Y +DEYP GTNA
Sbjct: 679 SPRNMYQCQMGKQTMGTPAHSLPYRPDNKLYRLQTPQAPVVQTSIHGEYKMDEYPNGTNA 738
Query: 582 IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSS-----RMFR 636
+VAVL+YTG+DMED++ILNKSSVERG H +Y+T V L E+ + SS RM
Sbjct: 739 VVAVLSYTGFDMEDSVILNKSSVERGFAHASVYKTIDVSLQEEAKMTGASSSGEDVRMKF 798
Query: 637 KSNIEKSK-----LDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVA 691
+ ++ K L DGLP VG + +P + ++ + K K E YV V
Sbjct: 799 SNKVKFDKVMYPSLQDDGLPQVGDCMTEGDPLYCVVDSISGMDRAAKHKEREIAYVQSVR 858
Query: 692 V--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPD 749
+ K KV+I R PRNPV+GDKFSSRHGQKGV S LWP DMPF +G+ PD
Sbjct: 859 ALGNDSGKGADNKVSITLRFPRNPVLGDKFSSRHGQKGVLSILWPQEDMPF-SESGISPD 917
Query: 750 LIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLG 809
+IINPHAFPSRMTI M++ES+A K G+LHG F NATPF D + +D G
Sbjct: 918 VIINPHAFPSRMTIGMMVESMAGKSGALHGNFQNATPFSFHESGDK-------VSVDYFG 970
Query: 810 QMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTR 869
+ L+ G+NY+G E LYSGV G + +++IG VYYQRLRHMV DK+QVR+TG +++TR
Sbjct: 971 EQLQAAGYNYYGSEPLYSGVSGCVMQADLYIGVVYYQRLRHMVLDKYQVRATGPTNELTR 1030
Query: 870 QPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQ 929
QP GEMERDSLL+HG A+LL DRL CSD H+A C CG +L ++
Sbjct: 1031 QPIKGRKKGGGIRLGEMERDSLLSHGTAFLLQDRLLNCSDKHVAYACCRCGDLLMSA--- 1087
Query: 930 PQKLPRREIGGLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
++ + G K I C+++ +E + +PYV+RYL E AAMN+KM L +
Sbjct: 1088 TERSTVQTTGQSANEAINKPKIRLYCRSAGSVEPIVLPYVYRYLVNELAAMNVKMRLAI 1146
>H6C3D5_EXODN (tr|H6C3D5) DNA-directed RNA polymerase OS=Exophiala dermatitidis
(strain ATCC 34100 / CBS 525.76 / NIH/UT8656)
GN=HMPREF1120_06165 PE=3 SV=1
Length = 1219
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/1069 (41%), Positives = 603/1069 (56%), Gaps = 139/1069 (13%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ RN+F+ R ++ + IR VR DQ+S T L+YL + + F + EYL+PV
Sbjct: 207 MAIARNAFTARGPTFSKFGIQIRSVRPDQTSQTNVLHYLTDGNVTFRFSWRKNEYLVPVV 266
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQR--------VDDRARMIIEEVRQL 112
++LKAL++T+D EI +G +GT V DR +++ +
Sbjct: 267 MILKALVETNDREI--------------AEGIIGTASGSTTPSSFVSDRTELLLRTYKAY 312
Query: 113 SLFTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNL 165
+L TR Q L Y+G+ F+P+L + V + L+ V HL + N DKF L
Sbjct: 313 NLKTRAQTLAYLGDKFRPVLGNPITMPDEKVGEDFLRKIVLPHLGNVDVTPAQNNDKFQL 372
Query: 166 LIFMLQKLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQS----GKDEMK 221
+++M++KL++L G LDNPD++ NQE+LL G L + LKE + DWL S ++ ++
Sbjct: 373 ILYMIRKLYALAAGDCTLDNPDAVSNQEILLGGFLYGMILKESIYDWLVSIGGAAREWIR 432
Query: 222 RKSG-TF---DFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQ 277
K+G TF F F+ K + ++ +E L TG LV+ TGLDL Q +G+T+
Sbjct: 433 MKNGATFADPSFDTDFLPKVV--RRTNENLAGRLEYFLSTGNLVSQTGLDLSQTSGFTIV 490
Query: 278 ADRLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTC 337
A+++N+ RF+SHFR +HRG FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+
Sbjct: 491 AEKINFYRFISHFRCIHRGTFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAH 550
Query: 338 TCRITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEV-----LTVLLDG 392
C ++I +D +G+ + + + L P + L+V LDG
Sbjct: 551 QC----------------MVQIKRIDT---TGVEKAISQFGLSPVPAMDVKNSLSVQLDG 591
Query: 393 CIVGCIPSGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVR 452
I+G P ++I +R KV+ IP +LE+G+VP S GG YPGLYLFT PSR +R
Sbjct: 592 RILGYCPVKRAQEISQLLRHWKVNGEHGIPTELEIGFVPTSNGGLYPGLYLFTDPSRMLR 651
Query: 453 PVRNISILSNENKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFP--ATHEEIHPTGMLSVV 510
PV+ I+ + +D +GPFEQ +M I C D P TH E PT +LS++
Sbjct: 652 PVKYIA-----SDKLDYVGPFEQQYMNIACVDA------DIIPNLTTHIEYKPTNILSIL 700
Query: 511 ANRTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKY 570
AN TP+SD NQSPRNMYQCQM+KQ M S + R D K Y LQT QTP+VR Y +Y
Sbjct: 701 ANMTPFSDFNQSPRNMYQCQMSKQAMGTPSSNMMCRTDNKAYLLQTGQTPVVRPPLYNEY 760
Query: 571 NIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDP 630
+D +P G NA+VAV++YTGYDM+DAMI+NKS+ ERG G IY+T+ +L E+ SRS
Sbjct: 761 GLDNFPNGMNAVVAVISYTGYDMDDAMIINKSAHERGFGDGVIYKTKVYELNEK-SRSSR 819
Query: 631 SSRMFRK--------SNIEKS---KLDSDGLPHVGQMIRPDE---PYCSI-YNAST---- 671
S + NI ++ LD DGLP VG + Y S+ ++ S
Sbjct: 820 SKTEIKSLFGFAEGDPNISETVLQTLDPDGLPAVGTKVSEGSVVLAYHSVMFDPSEGKLK 879
Query: 672 ---SSTHTLKKKGSEPVYVDYVAVDVKNKKD--LQKVNIRFRHPRNPVIGDKFSSRHGQK 726
+T K K +E Y+D + + D Q ++I++R PR P+IGDKFSSRHGQK
Sbjct: 880 NLDGNTKYFKYKDAEEAYIDQIRLIGTETGDQPCQAISIKYRIPRRPIIGDKFSSRHGQK 939
Query: 727 GVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATP 786
GVCS LWP DMPF +G++PD+IINPHAFPSRMTI M +ES+A K G+LHG + TP
Sbjct: 940 GVCSMLWPSQDMPFS-ESGIQPDVIINPHAFPSRMTIGMFVESLAGKSGALHGLAQDCTP 998
Query: 787 FRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQ 846
F S +D+ D G+ LR+ G+N++G E LYSGV GKE +I+IG VYYQ
Sbjct: 999 F--SFDEDHTAG-------DFFGEQLRQAGYNFYGNEPLYSGVTGKEFAADIYIGVVYYQ 1049
Query: 847 RLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHT 906
RLRHMVSDKFQVR+TG V+ + QP GEMERDSL+AHG AYLL DRL
Sbjct: 1050 RLRHMVSDKFQVRTTGPVNALHGQPIKGRSKGGGIRVGEMERDSLIAHGCAYLLQDRLMD 1109
Query: 907 CSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPK-----KVICHACQTSKGM 961
CSD A VC CGS L+T + P + PR A + V C AC
Sbjct: 1110 CSDKQRAWVCRSCGSFLSTMMV-PNQFALAGGNSNKPRAAQRVDPSGMVRCRACARPATF 1168
Query: 962 E----------------------TVAMPYVFRYLAAEFAAMNIKMTLKL 988
+ V +P V RYL E AAM ++ T ++
Sbjct: 1169 DDPKLSVWEDGAGRKFVGGDNTTVVNVPGVLRYLDVELAAMGVRTTFQI 1217
>F9G553_FUSOF (tr|F9G553) DNA-directed RNA polymerase OS=Fusarium oxysporum (strain
Fo5176) GN=FOXB_13785 PE=3 SV=1
Length = 1232
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1063 (41%), Positives = 612/1063 (57%), Gaps = 128/1063 (12%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF R GYT +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 MAINRPSFQNRGPGYTPYGIILRAVRPDETSQTNVLHYLSDGNMTFRFSWRKNEYLVPVM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDD-----RARMIIEEVRQLSLF 115
++LKAL++T+D EI +E G G++ ++ R +++ + +L+
Sbjct: 266 MILKALVETNDREI-----------FEGLVGPAGSKSTENTFLTHRIELLLRTYKSYNLY 314
Query: 116 TRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL-------DDNFDKFNLLIF 168
++ Y+GE F+ +L + V L+ V VHL + + +KF LL+F
Sbjct: 315 SKSDTRAYLGEKFRVVLGVPDTMTNLEVGTEFLRRIVLVHLGNVDVTEEQDKEKFKLLLF 374
Query: 169 MLQKLFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQ-----SGKDEMKRK 223
M++KL++LV G +DNPD++QNQE+LL G L LKE+L+++L S +D ++R
Sbjct: 375 MIRKLYALVAGDCAVDNPDAVQNQEILLGGFLYGQILKERLDEFLSVNVRASLRDYLRRN 434
Query: 224 SGTFDFSEIFVVKKCFDKTPARA----ISTSIENMLKTGRLVTNTGLDLQQRAGYTVQAD 279
G SE F +K F R + ++E L TG L + +GLDLQQ AG+TV A+
Sbjct: 435 PGVAFTSEDF--RKEFPNNIFRKANENLGNALEYFLSTGNLQSASGLDLQQTAGFTVVAE 492
Query: 280 RLNYLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTC 339
+LN+LRF+SHFR VHRGA FA L+TT VRKLLPESWGF+CPVHTPDG PCGLLNH+ C
Sbjct: 493 KLNFLRFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGAPCGLLNHLAHKC 552
Query: 340 RITSYFDSQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIP 399
+I + + I + ++ I+D V S T+ E + V+LDG I+G
Sbjct: 553 KIMTDYVDVSHIASLAQ-ELGIVD--VSSASTE-----------ENVVVMLDGKILGFCT 598
Query: 400 SGEVEKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISI 459
E +I R KV + +P LE+GYVP S GG+YPG+Y+ ++P+R VRPV+ + +
Sbjct: 599 PKESVRIADCFRYWKVEGTHGVPLQLEIGYVPPSRGGSYPGIYMTSTPARMVRPVKYLPL 658
Query: 460 LSNENKNIDLIGPFEQVFMEIRC-PDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSD 518
+ D +GP+EQ +M I P + G+ +TH E PT MLS++AN TP+SD
Sbjct: 659 -----QKEDWVGPYEQPYMSIAVVPQEVESGK-----STHVEFDPTNMLSILANMTPFSD 708
Query: 519 HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTG 578
NQSPRNMYQCQM KQTM I++R D K Y +QT QTPIVR + Y D +P G
Sbjct: 709 FNQSPRNMYQCQMGKQTMGTPGAAIRYRTDNKSYRIQTGQTPIVRAPLHNTYGFDNFPNG 768
Query: 579 TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRK- 637
NA+VAV++YTGYDM+DAMILNKS+ ERG HG IY+T+ + L + SR+ + + +
Sbjct: 769 MNAVVAVISYTGYDMDDAMILNKSAHERGFGHGTIYKTKKISLKDD-SRTKATKSVTKAF 827
Query: 638 --------SNIEKSKLDSDGLPHVGQMIRPDEPYCSI------YNASTSS----THTLKK 679
S + LD DGLPHVG++I+ + C+ YN + TH K
Sbjct: 828 GFAPHSYVSAQYQGMLDDDGLPHVGRLIQEGDVICAWHTVTPDYNGKLVNLDGITHYEKY 887
Query: 680 KGSEPVYVDYV---AVDVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDV 736
K SE +V+ V D N+ LQ ++++FR PR+P+IGDKFSSRHGQKGV SQ WP +
Sbjct: 888 KDSENGFVEEVRLIGADSGNEP-LQTISVKFRIPRSPIIGDKFSSRHGQKGVASQKWPTM 946
Query: 737 DMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNG 796
D+PF TG+ PD+IINPHAFPSRMTI M +ES+A K G+LHG ++TPF+ + G
Sbjct: 947 DLPFS-ETGISPDIIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEENTAG 1005
Query: 797 ESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKF 856
D G L + G+NYHG E +YSG+ G+EL +I+IG VYYQRLRHMV+DK+
Sbjct: 1006 ---------DYFGHQLMKAGYNYHGNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKY 1056
Query: 857 QVRSTGTVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVC 916
QVR+TG V T QP GEMERD+LLAHG A+LL DRL CSDY + +C
Sbjct: 1057 QVRTTGPVVPTTGQPIKGRKRGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSKSWIC 1116
Query: 917 SLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQT----SKGME---------- 962
CGS L+ Q P + +KA V C AC ++G++
Sbjct: 1117 RRCGSFLSVQPTVSQFAPGK-------KKAASIVRCRACAVKLDDAEGIDLTEIQGEIWE 1169
Query: 963 --------------TVAMPYVFRYLAAEFAAMNIKMTLKLNNG 991
V +P ++L E AAM +K+ +++ G
Sbjct: 1170 DGHGNSWVGGDHTTQVVVPGALKFLDVELAAMGVKLKYRVDRG 1212
>G1N5G7_MELGA (tr|G1N5G7) DNA-directed RNA polymerase (Fragment) OS=Meleagris
gallopavo GN=LOC100540788 PE=3 SV=2
Length = 1043
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/1002 (41%), Positives = 577/1002 (57%), Gaps = 71/1002 (7%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
++ R+ + R G+T+ VV+ CV+ + S++ + L+YL N + F + + LP+G
Sbjct: 98 LAMTRHKWKNRGPGFTEYGVVLHCVKDEHSAINMNLHYLENGCVMMNFIFQKELFFLPLG 157
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
LKAL++ +D +I L +K V + R + E +T+
Sbjct: 158 FALKALVNFTDYQIFEELVK------DKKNDTFYVNCVTEMLRAVAEA----GCYTQQNV 207
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT 180
L Y+G+ F+ L + S + A + + +HL D +KF LL M +KL++ G
Sbjct: 208 LEYLGKSFRVKLNLPEWYSNEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKLYAFAKGE 267
Query: 181 SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFS-EIFVVKKCF 239
+ DNPDSL NQEVL G L ++LKE+LE+WLQS K +++++ D + + K F
Sbjct: 268 CMEDNPDSLMNQEVLTAGQLFLMFLKERLENWLQSVKFILEKRTEKADININTDSLMKAF 327
Query: 240 DKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASF 299
T ++ S E +L TG L + TGL + Q +G V D+LN++R+LSHFR +HRG++F
Sbjct: 328 SLT--TDVTKSFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAF 385
Query: 300 AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKI 359
A +RTTTVRKLLPESWGFLCPV TPDGEPCGL+NHMT C I + +
Sbjct: 386 AQMRTTTVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEM-------------V 432
Query: 360 SILDILVDSGMTQLVPKLLLPGPP--EVLTVLLDGCIVGCIPSGEVEKIVAHIRELK--V 415
+ D+ +VP P P E V+LDG +VG + ++ +R K +
Sbjct: 433 PVTDLPPLLCALGVVPIDATPSKPYAECYRVVLDGAVVGWVEWDLAPQVAEALRRFKKQI 492
Query: 416 SSSAMIPDDLEVGYVPLSMGGA-YPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFE 474
+ P EV +P++ + YPGL++FT+P R VRPV+N+ E IG E
Sbjct: 493 TQEKRFPARAEVVLIPMTGKPSLYPGLFIFTTPCRMVRPVKNLLYGRKE-----WIGTLE 547
Query: 475 QVFMEIRCPDGGDGGRKSSFPA--THEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMA 532
QVFM + + P TH+E+ P +LSVVAN P+SDHNQSPRNMYQCQM
Sbjct: 548 QVFMNVATME------SDVVPGVTTHQELFPHSILSVVANLIPFSDHNQSPRNMYQCQMG 601
Query: 533 KQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYD 592
KQTM F + R+D KLY L TPQ+P+VR Y Y +D YP GTN++VAV++Y+GYD
Sbjct: 602 KQTMGFPVYNYKDRSDNKLYLLHTPQSPLVRPRMYDYYGMDSYPVGTNSVVAVISYSGYD 661
Query: 593 MEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSR-SDPSSRMFRKSNIE-KSKLDSDGL 650
MEDAMI+NKSS ERG +G + + E++DL+ + SR D R + K KLD+DGL
Sbjct: 662 MEDAMIVNKSSWERGFAYGSVIKMESIDLSLKASRGGDNLVFGIRPGDPNIKEKLDADGL 721
Query: 651 PHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYVAV--DVKNKKDLQKVNIRFR 708
P VG +++P +P+ S N +T T T+ + E VD + + + + +K I R
Sbjct: 722 PFVGSILQPGDPFYSYMNLNTGETFTVYYQNKEVGIVDNIKLCSNDRGTGKFKKACITVR 781
Query: 709 HPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLE 768
PRNP +GDKF+SRHGQKG+ SQLWP DMPF GM PD++ NPH FPSRMTI ML+E
Sbjct: 782 VPRNPTVGDKFASRHGQKGILSQLWPVEDMPFT-ENGMVPDILFNPHGFPSRMTIGMLIE 840
Query: 769 SVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSG 828
S+A K +LHG + +ATPF + K L G+ L G+N+ G E +YSG
Sbjct: 841 SMAGKSAALHGAYYDATPFTFTEKNSA---------LKYFGETLVSAGYNFFGTEKMYSG 891
Query: 829 VYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXXXFGEMER 888
+ G EL +IF+G VYYQRLRHMVSDKFQVR+TG D VT QP FGEMER
Sbjct: 892 ISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPVKGRNVEGGIRFGEMER 951
Query: 889 DSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAP- 947
D+LLAHG ++LLHDRL +CSD A VC+ CGSML+ +P PP
Sbjct: 952 DALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRP-----------PPSSVAS 1000
Query: 948 -KKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKL 988
++ C C ++ + +P+VFRY AE AAMNIK+ L L
Sbjct: 1001 NRRYSCMLCGRMDTIQVIPVPHVFRYFLAELAAMNIKLRLTL 1042
>G2X012_VERDV (tr|G2X012) DNA-directed RNA polymerase OS=Verticillium dahliae
(strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)
GN=VDAG_03035 PE=3 SV=1
Length = 1231
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1049 (41%), Positives = 608/1049 (57%), Gaps = 106/1049 (10%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ R SF+ R GY+ +++R VR D++S T L+YL + + F + EYL+PV
Sbjct: 206 MAIYRPSFANRGAGYSPHGIILRSVRPDETSQTNVLHYLTDGNMTFRFSWRKNEYLVPVM 265
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC 120
++LKAL++T+D EI L KG + + DR +++ L+T+ +
Sbjct: 266 MILKALVETNDREIFEGLIGS------KGSKSAQNTFLTDRVELLLRTYTSYGLYTKTET 319
Query: 121 LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDD-------NFDKFNLLIFMLQKL 173
Y+GE F+ +L S+ V LK V VHL + + DKF +L+FM++KL
Sbjct: 320 RAYLGEKFRVVLGVPDTMSHYDVGTEFLKRIVLVHLGNVDVTEQQDSDKFKMLLFMIRKL 379
Query: 174 FSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSG-----KDEMKRKSGTFD 228
++LV G +DNPD++QNQEVLL G L + LKE+L+++L + +D ++
Sbjct: 380 YALVAGECSVDNPDAIQNQEVLLGGFLYGMILKERLDEFLSTAVRASLRDYHRKFPAKTF 439
Query: 229 FSEIFVVKKCFDKTPAR----AISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYL 284
S+ F +K F T R ++ + +E + TG L + +GLDLQQ AGYTV A++LN+L
Sbjct: 440 TSQDF--QKDFPATIFRLANESLGSGLEYFMSTGNLTSPSGLDLQQTAGYTVVAEKLNFL 497
Query: 285 RFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSY 344
RF+SHFR +HRGA FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH+ CRI +
Sbjct: 498 RFISHFRMIHRGAFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRIMTD 557
Query: 345 FDSQGSIKDYFKIKISILDILV-DSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEV 403
+ S L LV + G E + V+LDG ++G E
Sbjct: 558 -----------PVDTSTLPALVAEMGAVSTSSA----ATDESVVVMLDGRVLGFSTPQES 602
Query: 404 EKIVAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNE 463
+I +R KV + +P +LE+GYVP S GG+YPGLY+ + +R VRPV+ + +
Sbjct: 603 IRIADTLRYWKVEGTHGVPLELEIGYVPPSNGGSYPGLYIASKAARMVRPVKYLPL---- 658
Query: 464 NKNIDLIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+ D +GP EQ +M I + S +TH E PT MLS++AN TP+SD NQSP
Sbjct: 659 -QKQDYVGPHEQPYMSIAVVEN----EIISGESTHVEFDPTNMLSILANMTPFSDFNQSP 713
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM + + HR D KLY +QT QTP+VR+ + +Y D +P G N++V
Sbjct: 714 RNMYQCQMGKQTMGTPATALAHRTDNKLYRIQTGQTPVVRSPLHNEYGFDNFPNGMNSVV 773
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRM-----FRKS 638
AV++YTGYDM+DAMILNKSS ERG HG IY+ + V L + SRS + ++ F +
Sbjct: 774 AVISYTGYDMDDAMILNKSSHERGFGHGTIYKVKKVSLKDD-SRSRTAKQVTKLFGFAPN 832
Query: 639 NIEK----SKLDSDGLPHVGQMIRPDEPYCSIYNAST----------SSTHTLKKKGSEP 684
+ K S LD DGLP+VG+M++ + C+ + + T K K SE
Sbjct: 833 SFVKGEYRSMLDEDGLPYVGRMVQEGDILCAYHTVTADFNGNLTNLDGQTQYEKYKESEQ 892
Query: 685 VYVDYVAV--DVKNKKDLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCG 742
+++ V + + Q V+I+ R PR PVIGDKFSSRHGQKGV SQ WP DMPF
Sbjct: 893 AFIEEVRIIGSENGNEPAQTVSIKLRVPRAPVIGDKFSSRHGQKGVASQKWPATDMPFT- 951
Query: 743 TTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSG 802
+GM+PD IINPHAFPSRMTI M +ES+A K G+LHG ++TPF K N E+ +
Sbjct: 952 ESGMQPDTIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPF-----KFNEENTAA- 1005
Query: 803 LLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTG 862
D G L + G+NYHG E +YSG+ G+EL+ +I+IG VYYQRLRHMV+DK+QVR+TG
Sbjct: 1006 ---DYFGHQLMKAGYNYHGNEPMYSGITGEELSADIYIGVVYYQRLRHMVNDKYQVRTTG 1062
Query: 863 TVDQVTRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSM 922
V T QP GEMERD+LLAHG A+LL DRL CSDY + +C CGS
Sbjct: 1063 PVVPTTGQPIKGRKKGGGIRVGEMERDALLAHGTAFLLQDRLLNCSDYTKSWICRSCGSF 1122
Query: 923 LATSFIQPQKLP----RREIGGLPPRKAPKKV-------------ICHACQTSKGM---- 961
L+ +QP P +++I + R K++ I Q ++ +
Sbjct: 1123 LS---VQPTVSPFVGKKKQISTVRCRSCAKRLDETDLEGDSIEGEIWEDGQGTQWVGGDN 1179
Query: 962 -ETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
V +P +YL E AAM +K+ +++
Sbjct: 1180 TTVVVVPGALKYLDVELAAMGVKLKYRVD 1208
>F2ULU0_SALS5 (tr|F2ULU0) DNA-directed RNA polymerase OS=Salpingoeca sp. (strain
ATCC 50818) GN=PTSG_08967 PE=3 SV=1
Length = 1130
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/1010 (42%), Positives = 597/1010 (59%), Gaps = 82/1010 (8%)
Query: 1 MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG 60
M+ +R SF R YT+ V IRCVR D++S + L+ + LGF ++ R+YL+P
Sbjct: 180 MALIRPSFMNRGFKYTEYGVQIRCVRPDETSQRLVLHLIEGGRCTLGFSIRKRQYLIPAI 239
Query: 61 IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQL------SL 114
++L+AL D ++ +I YE V + D + E V+ + +
Sbjct: 240 LLLRALKDVTERDI-----------YE---AIVESDPTDSTLK---EHVKAMLNAAPDNT 282
Query: 115 FTRLQCLNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHL--DDNFDKFNLLIFMLQK 172
+++ L Y+G F+ L + S A+ +LK Y+FVH+ D K++LLI M+++
Sbjct: 283 YSQHTSLEYLGAMFRIELGMHPSISNIEAARHLLKQYIFVHIPQHDYTAKYDLLIAMIRR 342
Query: 173 LFSLVDGTSVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKD------EMKRKSGT 226
L++L G DNPDS NQEVL G + LKE+++++L + K M R+
Sbjct: 343 LYALKSGRVRADNPDSPMNQEVLQAGQIYGALLKEQMQEYLLAMKRFITMQVNMGREVDV 402
Query: 227 FDFSEIFVVKKCFDKTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRF 286
D S + + F P I +++ L TG L + TGLD Q AG+ + AD+LN LR+
Sbjct: 403 GDQS--YFRNRVFPTMPD--IGKALDYFLATGNLKSTTGLDQMQAAGFAIVADKLNILRY 458
Query: 287 LSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFD 346
+SHFR VHRGA FA ++TT VRKLLPE+WGF+CPVHTPDG PCGLLNH+T C S
Sbjct: 459 MSHFRCVHRGAYFAEMKTTAVRKLLPEAWGFICPVHTPDGAPCGLLNHLTRHCTPQSKAV 518
Query: 347 SQGSIKDYFKIKISILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKI 406
S IK ++ S+ + + GM ++ P VL V LDG +VG +E +
Sbjct: 519 SPAVIKQLRQVVHSLG--VQEVGMHRI--------EPPVLDVFLDGVVVGVANVKTIEAV 568
Query: 407 VAHIRELKVSSSAMIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKN 466
+RE KV +P+ LE+ ++P + GG YPGLYLFT+P+R +RPV ++ NK
Sbjct: 569 ALKLREYKVLGLHNVPEVLEIAFIPPAEGGVYPGLYLFTTPTRMLRPVLHLGT----NKR 624
Query: 467 IDLIGPFEQVFMEIRCPDGGDGGR---KSSFPATHEEIHPTGMLSVVANRTPWSDHNQSP 523
+LI EQV+++I D + R K TH EI GMLSVV++ TP+SD NQSP
Sbjct: 625 -ELISSLEQVYLDIGV-DIAECHRNHEKFGINYTHMEISKHGMLSVVSSFTPFSDFNQSP 682
Query: 524 RNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIV 583
RNMYQCQM KQTM SQ I +RAD KLY L + QTP+V Y +YN+D+YP G NA+V
Sbjct: 683 RNMYQCQMGKQTMGIPSQAIPYRADNKLYVLNSGQTPVVHPRAYNEYNLDDYPLGNNAVV 742
Query: 584 AVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKS 643
V+AYTGYDMEDAMI+NK S++RG H ++ +TE VDL ++ S + R
Sbjct: 743 CVIAYTGYDMEDAMIINKGSIDRGFMHARVLKTEIVDLVDRSGVSKAFGLLPRHRAENSD 802
Query: 644 KLDSDGLPHVGQMIRPDEPYCSIYNASTSSTHTLKKKGSEPVYVDYV----AVDVKNKKD 699
LD DGLP VG M+ +P+ ++ + S+ H + KG EP ++ V A D K++
Sbjct: 803 FLDDDGLPRVGIMVEKGDPFYAVVDEEQSN-HIHRYKG-EPARIESVRLLLASDTSTKRE 860
Query: 700 LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPS 759
+Q++ I RNP+IGDKF+SRHGQKG+ SQ+ P DMPF +G+ PD+I NPH FPS
Sbjct: 861 VQRIAITVSVNRNPIIGDKFASRHGQKGILSQMLPSEDMPFT-ESGITPDIIFNPHGFPS 919
Query: 760 RMTIAMLLESVAAKGGSLHGEFVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNY 819
RMTI ML+ES+A K G LH F ++TPF + ++ ++ G+ LR+ G+NY
Sbjct: 920 RMTIGMLIESMAGKAGCLHERFYDSTPF---------QFDEDDTAVEFFGEELRKAGYNY 970
Query: 820 HGLEVLYSGVYGKELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 879
G E +YSG+ G+EL ++FIG V+YQRLRHMVSDK+QVR+TG VD TRQP
Sbjct: 971 FGHERMYSGITGEELEVDVFIGNVFYQRLRHMVSDKYQVRATGPVDSRTRQPIKGRKRHG 1030
Query: 880 XXXFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIG 939
FGEMERD+L+AHG A+LL DRL CSD A VC CG +L+T+ I R
Sbjct: 1031 GVRFGEMERDALIAHGTAFLLQDRLLRCSDDSEATVCKSCGGVLSTTSIAQSAASR---- 1086
Query: 940 GLPPRKAPKKVICHACQTSKGMETVAMPYVFRYLAAEFAAMNIKMTLKLN 989
+K +C +C+ SK ++ V +PYVFRYL AE A MNI M+L ++
Sbjct: 1087 -------IRKDVCLSCKDSKVVK-VRLPYVFRYLGAELAGMNINMSLDVS 1128