Miyakogusa Predicted Gene

Lj3g3v1666020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1666020.1 Non Chatacterized Hit- tr|A5AWG7|A5AWG7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,22.61,0.0000003,B3,B3 DNA binding domain; DNA-binding pseudobarrel
domain,DNA-binding pseudobarrel domain; seg,NULL;,CUFF.42978.1
         (274 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SYK9_LOTJA (tr|I3SYK9) Uncharacterized protein OS=Lotus japoni...   111   2e-22

>I3SYK9_LOTJA (tr|I3SYK9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 281

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 15/280 (5%)

Query: 1   MSPVQKYALKPSTWPDFSVELDPKMEHLQVPSDFYEKHKTALGDRVVIMDPVGGEFSFRL 60
           M P+   + +P     FS+ +D + EH+++P+ FYEK K+ + + V + DP+G   +  +
Sbjct: 1   MEPIGSCSDRPPE--SFSIPIDLREEHMRLPAFFYEKKKSQIKNDVELTDPMGNCVTIGV 58

Query: 61  LAGNLGGLIFECVAEFLRRYGLKENHLCDFFYFGKNTFIVKILDGTLKEISYGVGTSLSQ 120
           + G+L G ++  V + ++ YGLK+NH     Y G+N F ++I D   K   Y +      
Sbjct: 59  MTGSLEGFLWYAVPKLVKFYGLKKNHDMVCVYEGENRFRIEIFDENKKHFPYPIPVRQEY 118

Query: 121 PIVIXXXXXXXXXXXXXXXXXXXXXXXXXXXGIMXXXXXXXXXXXXRVLH-------PFD 173
                                            +             V H        F 
Sbjct: 119 EEPPKEIVDLSSDTENEVEECEEPPKEIVDLSSLTEDEVEEVNRVHVVAHVDNQIRYSFT 178

Query: 174 KVITKSDSKGDQTLSLPMMYVRNHVRPN-WQHVVLQTPEG--RTYACELKRRNPGEDDTP 230
           KV+T S +KG QTL LP  ++R ++  N W+++VL+  EG  + Y C+L RR      T 
Sbjct: 179 KVVTTSVAKGSQTLPLPRSFIRKYLSHNDWENLVLKK-EGVKKQYCCKLLRRTRN-GFTD 236

Query: 231 CNIGKDWNKFVKENKLKRGDTVHFRPDSVANNMIYVSIIR 270
             +G+++  F+K+NK+ +GD +HF  + + NN++YV I+R
Sbjct: 237 YQLGEEFYHFIKDNKVAKGDKLHFTANEI-NNIVYVRIVR 275