Miyakogusa Predicted Gene
- Lj3g3v1011010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1011010.1 tr|G7JFG9|G7JFG9_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_4g130200 PE=4
SV=1,61.96,3e-19,FBD,FBD,CUFF.41991.1
(94 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7JFG9_MEDTR (tr|G7JFG9) F-box/LRR-repeat protein OS=Medicago tr... 101 9e-20
G7JDU1_MEDTR (tr|G7JDU1) F-box/LRR-repeat protein OS=Medicago tr... 92 1e-16
G7IXZ7_MEDTR (tr|G7IXZ7) F-box family-3 OS=Medicago truncatula G... 87 2e-15
G7KDV1_MEDTR (tr|G7KDV1) F-box/LRR-repeat protein OS=Medicago tr... 79 4e-13
G7KDU9_MEDTR (tr|G7KDU9) F-box/LRR-repeat protein OS=Medicago tr... 79 5e-13
M0ZKH4_SOLTU (tr|M0ZKH4) Uncharacterized protein OS=Solanum tube... 74 1e-11
G7IMD1_MEDTR (tr|G7IMD1) F-box/LRR-repeat protein OS=Medicago tr... 60 4e-07
>G7JFG9_MEDTR (tr|G7JFG9) F-box/LRR-repeat protein OS=Medicago truncatula
GN=MTR_4g130200 PE=4 SV=1
Length = 392
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 1 MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
+DIL+KTPKLEVLHI G +D ED +S+PCC K SLK S S FDG E EIQL
Sbjct: 286 VDILRKTPKLEVLHISKG--DCTALDNEDLTSDSLPCCIKSSLKLCSFSDFDGDEIEIQL 343
Query: 61 LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
LK L ENATVLE I IFCS LSSNLKK ++ N
Sbjct: 344 LKCLTENATVLEAINIFCSGGLSSNLKKLTDVRN 377
>G7JDU1_MEDTR (tr|G7JDU1) F-box/LRR-repeat protein OS=Medicago truncatula
GN=MTR_4g080590 PE=4 SV=1
Length = 467
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
Query: 2 DILQKTPKLEVLHI---------PMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFD 52
DIL+K+PKLE LHI + +D ED +S+PCCFK SLKS IS F
Sbjct: 347 DILRKSPKLEFLHIYGVHLVSCSRFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFR 406
Query: 53 GGEAEIQLLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
G EAEI+L+KFLLEN T+L E+ I+C+ LS KK A++ N
Sbjct: 407 GDEAEIRLVKFLLENVTLLREMNIYCTGYLSKKSKKLADVRN 448
>G7IXZ7_MEDTR (tr|G7IXZ7) F-box family-3 OS=Medicago truncatula GN=MTR_3g048290
PE=4 SV=1
Length = 642
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 8/97 (8%)
Query: 1 MDILQKTPKLEVLHIP---MGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAE 57
MDIL+KTPKLE L IP + + +D +D ILNS+PCCFK SLK F G E
Sbjct: 518 MDILRKTPKLEDLTIPGVVLNY-----LDSDDLILNSLPCCFKSSLKRLCFLNFHGNVHE 572
Query: 58 IQLLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
I+ + F+LENA LEEI+I CS+ LS++++K ++ N
Sbjct: 573 IKFVTFILENAPYLEEIKIHCSRHLSADMEKLDDVRN 609
>G7KDV1_MEDTR (tr|G7KDV1) F-box/LRR-repeat protein OS=Medicago truncatula
GN=MTR_5g039970 PE=4 SV=1
Length = 703
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 6 KTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQLLKFLL 65
KTP LEVLHI GF E NS P CF SLK SIS F G E +I+ +KFLL
Sbjct: 349 KTPNLEVLHISKGF---FLFLDEGWPSNSFPWCFTSSLKVCSISDFLGIEPDIEAVKFLL 405
Query: 66 ENATVLEEIRIFCSKTLSSNLKKQAEISN 94
ENATVL EI I CS+ LS NL+K A++ N
Sbjct: 406 ENATVLGEINISCSELLSKNLEKLADVRN 434
>G7KDU9_MEDTR (tr|G7KDU9) F-box/LRR-repeat protein OS=Medicago truncatula
GN=MTR_5g039950 PE=4 SV=1
Length = 472
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 2 DILQKTPKLEVLHIPMGFDPQICMD--GEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQ 59
DIL KTPKLEVL IPM + C+ E+ +NSVPCCFK SLK IS F+G + E+Q
Sbjct: 315 DILHKTPKLEVLGIPMVY----CLHLVDEEVTINSVPCCFKSSLKFLWISDFNGYKYEVQ 370
Query: 60 LLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
++ L+E T+LEE++I S LS L+++ + N
Sbjct: 371 MISLLVEKFTILEEMKISFSGFLSDCLEEETAVKN 405
>M0ZKH4_SOLTU (tr|M0ZKH4) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401001040 PE=4 SV=1
Length = 474
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%)
Query: 2 DILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQLL 61
++LQ PKL+ LH G DP + + +D L SVP CF SLK+ S F G + EI L
Sbjct: 365 ELLQCLPKLQSLHFSEGLDPCMHLCEDDWNLRSVPPCFLSSLKTVKYSNFHGNDTEISFL 424
Query: 62 KFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
+ LLE A VLE++ I CSK +LKKQ E+ +
Sbjct: 425 RNLLEIAIVLEKLNIVCSKRPFGDLKKQKEVED 457
>G7IMD1_MEDTR (tr|G7IMD1) F-box/LRR-repeat protein OS=Medicago truncatula
GN=MTR_2g102420 PE=4 SV=1
Length = 172
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 1 MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
++ L + PKLE L +P+G + D D L P CFK SLK IS F G + I
Sbjct: 72 LEFLLRCPKLETLVVPLGIGKIV--DKRDYALIPGPYCFKSSLKMLQISDFHGYYSSISF 129
Query: 61 LKFLLENATVLEEIRIFCSKTLSSN--LKKQAEISN 94
++F+L+NA VL+ I I CS L LK A++ N
Sbjct: 130 VEFILQNARVLKLIEITCSPFLPHGVPLKNLADVKN 165