Miyakogusa Predicted Gene
- Lj3g3v0828230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0828230.1 tr|G7ZWA7|G7ZWA7_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_038s0021 PE=4 SV=1,78.05,0.000000001,seg,NULL;
DUF295,Protein of unknown function DUF295,gene.g46242.t1.1
(130 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7ZWA7_MEDTR (tr|G7ZWA7) F-box protein OS=Medicago truncatula GN... 67 2e-09
G7J7J2_MEDTR (tr|G7J7J2) F-box family protein OS=Medicago trunca... 65 7e-09
K7LI71_SOYBN (tr|K7LI71) Uncharacterized protein OS=Glycine max ... 65 8e-09
B7FJY3_MEDTR (tr|B7FJY3) Uncharacterized protein OS=Medicago tru... 64 2e-08
G7IZH0_MEDTR (tr|G7IZH0) F-box protein OS=Medicago truncatula GN... 64 2e-08
G7IB95_MEDTR (tr|G7IB95) F-box protein SKIP23 OS=Medicago trunca... 63 4e-08
G7IWS7_MEDTR (tr|G7IWS7) F-box protein OS=Medicago truncatula GN... 62 6e-08
G7IWT8_MEDTR (tr|G7IWT8) MADS-box transcription factor OS=Medica... 62 7e-08
G7IWN5_MEDTR (tr|G7IWN5) F-box family protein OS=Medicago trunca... 62 7e-08
G7KMS2_MEDTR (tr|G7KMS2) F-box protein OS=Medicago truncatula GN... 61 1e-07
G7IZH1_MEDTR (tr|G7IZH1) F-box protein OS=Medicago truncatula GN... 60 4e-07
G7I268_MEDTR (tr|G7I268) F-box family protein OS=Medicago trunca... 59 5e-07
G7IZG8_MEDTR (tr|G7IZG8) F-box protein OS=Medicago truncatula GN... 59 7e-07
G7IWN8_MEDTR (tr|G7IWN8) F-box protein OS=Medicago truncatula GN... 58 9e-07
G7J7J1_MEDTR (tr|G7J7J1) F-box protein SKIP23 OS=Medicago trunca... 58 1e-06
I3SK47_MEDTR (tr|I3SK47) Uncharacterized protein OS=Medicago tru... 58 1e-06
G7IWM6_MEDTR (tr|G7IWM6) F-box protein OS=Medicago truncatula GN... 58 2e-06
G7IWM0_MEDTR (tr|G7IWM0) F-box family protein OS=Medicago trunca... 57 2e-06
G7IZI3_MEDTR (tr|G7IZI3) F-box protein SKIP23 OS=Medicago trunca... 57 2e-06
G7IB97_MEDTR (tr|G7IB97) F-box protein SKIP23 OS=Medicago trunca... 57 2e-06
>G7ZWA7_MEDTR (tr|G7ZWA7) F-box protein OS=Medicago truncatula GN=MTR_038s0021
PE=4 SV=1
Length = 404
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 35/41 (85%)
Query: 88 YVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVG 128
YV+RLDEKEK WV +TSLG+RVLFLGN C FSASASDL V
Sbjct: 280 YVFRLDEKEKKWVSLTSLGDRVLFLGNGCSFSASASDLCVA 320
>G7J7J2_MEDTR (tr|G7J7J2) F-box family protein OS=Medicago truncatula
GN=MTR_3g092000 PE=4 SV=1
Length = 434
Score = 65.1 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRV 127
V+RLDEKEK WV++ SLG+RVLFLGN C FSASASDL V
Sbjct: 307 VFRLDEKEKKWVKLASLGDRVLFLGNGCSFSASASDLSV 345
>K7LI71_SOYBN (tr|K7LI71) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 368
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 77 EDEDKEVLGW-----FYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVG 128
++ED +GW F V+RLDE+ K WVE+T LG RVLFLG+ C FSASA DL +G
Sbjct: 258 DEEDVAGMGWERTVKFDVFRLDEEGKKWVELTDLGERVLFLGDDCAFSASAKDLNLG 314
>B7FJY3_MEDTR (tr|B7FJY3) Uncharacterized protein OS=Medicago truncatula PE=2
SV=1
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 75 ADEDEDKEVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDL 125
D E+ V W V+RLDEKEK WV++T+LG++VLFLGN C FSASAS+L
Sbjct: 257 VDRYENYCVPVWIDVFRLDEKEKRWVKLTNLGDKVLFLGNGCSFSASASEL 307
>G7IZH0_MEDTR (tr|G7IZH0) F-box protein OS=Medicago truncatula GN=MTR_3g029640
PE=4 SV=1
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 75 ADEDEDKEVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDL 125
D E+ V W V+RLDEKEK WV++T+LG++VLFLGN C FSASAS+L
Sbjct: 257 VDRYENYCVPVWIDVFRLDEKEKRWVKLTNLGDKVLFLGNGCSFSASASEL 307
>G7IB95_MEDTR (tr|G7IB95) F-box protein SKIP23 OS=Medicago truncatula
GN=MTR_1g016540 PE=4 SV=1
Length = 185
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 86 WFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRV 127
W V+RLDEK + WV++TSLG+RVLFLGN C FSASAS+L V
Sbjct: 82 WIKVFRLDEKARKWVKLTSLGDRVLFLGNGCLFSASASELSV 123
>G7IWS7_MEDTR (tr|G7IWS7) F-box protein OS=Medicago truncatula GN=MTR_3g030590
PE=4 SV=1
Length = 800
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVGS 129
V+RLDEKEK WV++T+LG+RVLFLG C FSASAS+L V +
Sbjct: 332 VFRLDEKEKKWVKLTNLGDRVLFLGEDCSFSASASELCVAN 372
>G7IWT8_MEDTR (tr|G7IWT8) MADS-box transcription factor OS=Medicago truncatula
GN=MTR_3g030770 PE=3 SV=1
Length = 339
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 71 YSVNADEDEDKEVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDL 125
Y N D+D+ K VYRLDEKEK WV++ +LG+RVLF G C FSASASDL
Sbjct: 250 YLSNGDDDDVK-----IDVYRLDEKEKRWVKLVNLGDRVLFFGEGCSFSASASDL 299
>G7IWN5_MEDTR (tr|G7IWN5) F-box family protein OS=Medicago truncatula
GN=MTR_3g030050 PE=4 SV=1
Length = 423
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 87 FYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVGS 129
F V+RLDEKEK WVE+ +LG+ VLFLG C FSASASDL +G+
Sbjct: 327 FDVFRLDEKEKKWVEVRNLGDMVLFLGEECAFSASASDLCIGN 369
>G7KMS2_MEDTR (tr|G7KMS2) F-box protein OS=Medicago truncatula GN=MTR_6g018390
PE=4 SV=1
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 86 WFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVG 128
W +++L+EKEK WV++TSLG+RVLFLG C FS SASDL V
Sbjct: 274 WIDLFKLNEKEKKWVKLTSLGDRVLFLGEVCSFSVSASDLCVA 316
>G7IZH1_MEDTR (tr|G7IZH1) F-box protein OS=Medicago truncatula GN=MTR_3g029650
PE=4 SV=1
Length = 752
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRV 127
V++LDE EK WV++T+LG+ VLFLGN C FSASASDL V
Sbjct: 268 VFKLDEMEKKWVKLTTLGDSVLFLGNECSFSASASDLCV 306
>G7I268_MEDTR (tr|G7I268) F-box family protein OS=Medicago truncatula
GN=MTR_1g007220 PE=4 SV=1
Length = 171
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 51 PLPIRLFHLKRGRAVVSGKAYSVNADEDEDKEVLGWFYVYRLDEKEKMWVEMTSLGNRVL 110
P + F ++ ++ Y DED D V++L+EKEK WV++ +LG+RV
Sbjct: 48 PYVVDKFLVESDGDLLLADVYDHEIDEDADDYDRARINVFKLNEKEKKWVKLANLGDRVF 107
Query: 111 FLGNYCCFSASASDLRV 127
FLG C FSASASDL V
Sbjct: 108 FLGLLCSFSASASDLCV 124
>G7IZG8_MEDTR (tr|G7IZG8) F-box protein OS=Medicago truncatula GN=MTR_3g029620
PE=4 SV=1
Length = 377
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 75 ADEDEDKEVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDL 125
D E+ V W V+RLDEKEK WV++ +LG++VLFLGN FSASAS+L
Sbjct: 266 VDRYENYRVPVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASEL 316
>G7IWN8_MEDTR (tr|G7IWN8) F-box protein OS=Medicago truncatula GN=MTR_3g030080
PE=4 SV=1
Length = 375
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 31/39 (79%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRV 127
V RLDEKE WV + SLG+RVLFLGN C FSASASDL V
Sbjct: 278 VLRLDEKEMRWVNLMSLGDRVLFLGNGCSFSASASDLCV 316
>G7J7J1_MEDTR (tr|G7J7J1) F-box protein SKIP23 OS=Medicago truncatula
GN=MTR_3g091990 PE=4 SV=1
Length = 466
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRV 127
V+RL +KEK WV++TSLG+RVLFLGN C F ASAS+L V
Sbjct: 294 VFRLAKKEKKWVKLTSLGDRVLFLGNGCSFFASASNLSV 332
>I3SK47_MEDTR (tr|I3SK47) Uncharacterized protein OS=Medicago truncatula PE=2
SV=1
Length = 368
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 76 DEDEDKEVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDL 125
D E+ V W V+RLDEKEK WV++T+LG++ LFLGN FSASAS+L
Sbjct: 258 DRYENYCVPVWIDVFRLDEKEKRWVKLTNLGDKALFLGNGRSFSASASEL 307
>G7IWM6_MEDTR (tr|G7IWM6) F-box protein OS=Medicago truncatula GN=MTR_3g029960
PE=4 SV=1
Length = 969
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDL 125
V++L EKEK WV++T+LG+ VLFLGN C FSASASDL
Sbjct: 281 VFKLYEKEKKWVKLTTLGDSVLFLGNDCSFSASASDL 317
>G7IWM0_MEDTR (tr|G7IWM0) F-box family protein OS=Medicago truncatula
GN=MTR_3g029900 PE=4 SV=1
Length = 495
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 33/47 (70%)
Query: 82 EVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVG 128
E L F V+RLDEK K WV++ SL NRVLF N C FSASASDL V
Sbjct: 364 ENLMTFNVFRLDEKNKKWVKLMSLRNRVLFFVNGCSFSASASDLCVA 410
>G7IZI3_MEDTR (tr|G7IZI3) F-box protein SKIP23 OS=Medicago truncatula
GN=MTR_3g029840 PE=4 SV=1
Length = 357
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 34/47 (72%)
Query: 82 EVLGWFYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVG 128
E L F V+RLDEK K WV++ SLG+RVLF N C FSASASDL V
Sbjct: 264 ENLMNFDVFRLDEKNKRWVKLMSLGDRVLFFVNGCSFSASASDLCVA 310
>G7IB97_MEDTR (tr|G7IB97) F-box protein SKIP23 OS=Medicago truncatula
GN=MTR_1g016570 PE=4 SV=1
Length = 366
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 89 VYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRV 127
V+R DEKE W ++ SLG+RVLFLGN C FSASASDL V
Sbjct: 266 VFRFDEKECKWADLMSLGDRVLFLGNGCSFSASASDLCV 304