Miyakogusa Predicted Gene

Lj3g3v0826180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0826180.1 tr|G7IWV6|G7IWV6_MEDTR E3 ubiquitin-protein
ligase RNF181 OS=Medicago truncatula GN=MTR_3g031000
PE=,56.45,0.00000000006,ZF_RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; seg,NULL;
RING/U-b,CUFF.41562.1
         (217 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7LI81_SOYBN (tr|K7LI81) Uncharacterized protein OS=Glycine max ...    71   2e-10
G7IWV6_MEDTR (tr|G7IWV6) E3 ubiquitin-protein ligase RNF181 OS=M...    57   6e-06

>K7LI81_SOYBN (tr|K7LI81) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 216

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 51/190 (26%)

Query: 1   MDQQNVESMLSRVGFPNEAFQFVVPKVLECADEIANRTYKDR---KLLSIVVYILVSQAS 57
           M +  + S LS +G P+EA + VV KVL+CA  +AN    DR   K+LS+ V + ++Q  
Sbjct: 67  MQETTIVSWLSSMGVPSEAHRSVVAKVLQCARGMAN----DRIPTKVLSMRVDVTITQPG 122

Query: 58  DEDEINVDYDSGFEEYSEEGDQDFGLVPSAAAVTSIDEGLEMMRXXXXXXXXXXXXXXXX 117
           D+ E   +     +E  ++ D+D GLV +AA    + EGLE +                 
Sbjct: 123 DDFEDYDEEYE--DEDHDDDDEDHGLVQAAAKSQHV-EGLETVEQEGCK----------- 168

Query: 118 XXXXXXXXLVPASVKSIXXXXXXXXXXXXNCAICFEDFHDVGVRMPCLHMFHESCIKTWL 177
                                         CAIC EDF +VGVRMPCLHMFHE+CI  WL
Sbjct: 169 -----------------------------RCAICLEDF-NVGVRMPCLHMFHENCIGEWL 198

Query: 178 HAANSAKISK 187
              NS  + +
Sbjct: 199 QIGNSCPLCR 208


>G7IWV6_MEDTR (tr|G7IWV6) E3 ubiquitin-protein ligase RNF181 OS=Medicago
           truncatula GN=MTR_3g031000 PE=4 SV=1
          Length = 342

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 126 LVPASVKSIXXXXXXXXXXXXNCAICFEDFHDVGVRMPCLHMFHESCIKTWLHAANSAKI 185
            VPA+   I             CAICFEDF +VGVR+PC HMFH +CI  WL   NS  +
Sbjct: 277 FVPAAKSFIEGLKMVEVEEVEKCAICFEDF-NVGVRIPCSHMFHMTCICDWLVIGNSCPL 335

Query: 186 SK 187
            +
Sbjct: 336 CR 337