Miyakogusa Predicted Gene

Lj3g3v0718720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718720.1 Non Chatacterized Hit- tr|I1MMA1|I1MMA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5479
PE=,50,0.0003,seg,NULL,CUFF.41312.1
         (122 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1MMA1_SOYBN (tr|I1MMA1) Uncharacterized protein OS=Glycine max ...    55   7e-06

>I1MMA1_SOYBN (tr|I1MMA1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 144

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 62  KQPIASDAQISQXXXXXXXXXXXXXXXPVFVLTDEWREFFAKSEAKRKIE 111
           +QP +SDA+IS                PVFVLTDEWREFFA+SEA+RK+E
Sbjct: 86  EQPFSSDARISLELEHIVLDGEEEEDEPVFVLTDEWREFFAQSEARRKLE 135